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Oncology (Oncopathology) Nomenclature, definitions Neoplasia • „new growth” → leads to NEOPLASM Tumor • Was originally used for the „swelling” phenomenon in relation to inflammation • the non-neoplastic, inflammatory use of this expression is almost vanished today Oncology • (Greek oncos = tumor), study of tumors/neoplasms • medical discipline dealing with the diagnosis, the genesis and therapy of neoplasms What is neoplasm? British oncologist, Willis: „A neoplasm is an abnormal mass of tissue, the growth of which exceeds and is uncoordinated with that of the normal tissues and persists the same excessive manner after cessation of the stimuli which evoked the change” Clonal proliferation, shows evolution, autonomous proliferation (not in nutrition, blood supply) Dignity of the tumors (behavioral nature) Benign Malignant • • • • • considered to be rather innocent remains localised does not spread to other sites easily amenable with local surgical removal • • • • the „cancer” (latin: „crab”) because they adhere to other parts of the body invade and destroy other adjacent structures spread to distant sites - metastasis cause death many of them however are treatable/curable with the modern diagnostics and therapy, mainly in early stages. Nomenclature of benign tumors Nomenclature of benign tumors – suffix ~oma to the cell of origin, • • • Mesenchymal examples: Fibroma - fibrous tissue, fibroblasts Chondroma – made of chondrocytes, cartilage tumor Lipoma – benign tumor of the fat tissue Leiomyoma/rhabdomyoma – benign tumor of the smooth or striated muscles respectively Benign tumors epithelial origin The nomenclature is a bit more complex Adenoma – glandular tumors Papillary cystadenoma - eg. ovary glandular tumor projects into cysts Papilloma (squamous) – fingerlike/warthy projections from squamous epithelium Polyp – benign/malignant developed an mucosal sufaces of luminal organs However exceptions exist: ~oma ending, but represent malignancies (inapropriate, but deeply entrenched expressions). Lymphoma, melanoma, seminoma, mesothelioma, synovioma (synovial sarcoma) All are highly malignant neoplasms, but their name does not reflect on malignancy. Benign tumors, epithelial and mesenchymal Nomenclature of tumors Malignant mesenchymal – SARCOMA („sar” greek – fleshy) According to the tissue origin: fibrosarcoma, rhabdomyosarcoma, leiomyosarcoma, chondrosarcoma, osteogen sarcoma. Malignant epithelial – CARCINOMA squamous cell carcinoma – tumor cells are resemble stratified squamous epithelium. adenocarcinoma – tumor cells arrange in glandular structures Mixed origin – divergent differentiation of the same neoplastic clone originate from single germ layer – pleiomorphic adenoma (mixed tumor) – developed from the ectoderm: duct cells, myoepithelial cells, epidermoid cells, myxoid background with mesenchymal cells, chondroid tissue, bone Mixed origin, but from multiple two or more germ layers (all the three) – TERATOMA – from totipotential cells – normally present in OVARIES and TESTES – abnormally present in sequestred form in the midline – EMBRYONIC RESTs – may consist of mature cells/tissues – benign, MATURE TERATOMA, e.g. dermoid cysts or teratoma adultum cysticum – may consist of immature cells/tissues – malignant, IMMATURE, potentialy/overtly malignant TERATOMA (or some of the components show true malignant component –a carcinoma) Benign tumors, adult teratoma Tissue of Origin COMPOSED OF ONE PARENCHYMAL CELL TYPE Tumors of Mesenchymal Origin Connective tissue and derivatives Endothelial and Related Tissues Blood vessels Lymph vessels Synovium Mesothelium Brain coverings Blood Cells and Related Cells Hematopoietic cells Lymphoid tissue Muscle Smooth Striated Tumors of Epithelial Origin Stratified squamous Basal cells of skin or adnexa Epithelial lining of glands or ducts Benign Malignant Fibroma Lipoma Chondroma Osteoma Fibrosarcoma Liposarcoma Chondrosarcoma Osteogenic sarcoma Hemangioma Lymphangioma Angiosarcoma Lymphangiosarcoma Synovial sarcoma Mesothelioma Invasive meningioma Meningioma Leukemias Lymphomas Leiomyoma Rhabdomyoma Leiomyosarcoma Rhabdomyosarcoma Squamous cell papilloma Squamous cell carcinoma Basal cell carcinoma Adenoma Adenocarcinoma Papilloma Papillary carcinomas Cystadenoma Cystadenocarcinoma Respiratory passages Bronchial adenoma Bronchogenic carcinoma Renal epithelium Renal tubular adenoma Renal cell carcinoma Liver cells Liver cell adenoma Hepatocellular carcinoma Urinary tract epithelium (transitional) Transitional-cell papilloma Transitional-cell carcinoma Placental epithelium Hydatidiform mole Choriocarcinoma Testicular epithelium (germ cells) Seminoma Embryonal carcinoma Tumors of Melanocytes Nevus Malignant melanoma MORE THAN ONE NEOPLASTIC CELL TYPE—MIXED TUMORS, USUALLY DERIVED FROM ONE GERM CELL LAYER Salivary glands Pleomorphic adenoma (mixed tumor of salivary origin) Malignant mixed tumor of salivary gland origin Renal anlage Wilms tumor MORE THAN ONE NEOPLASTIC CELL TYPE DERIVED FROM MORE THAN ONE GERM CELL LAYER—TERATOGENOUS Totipotential cells in gonads or in embryonic rests Mature teratoma, dermoid cyst Immature teratoma, teratocarcinoma HAMARTOMA, CHORISTOMA HAMARTOMA • benign mass, composed of dysorganised tissues/cell componens, which are normally present in the given site. • originally regarded as not true tumor, but rather developmental defect, although the name contains the „~oma” ending. Eg.: CHONDROID HAMARTOMA of the lung – islands of dysorganised, but mature/normal cartilage + blood lessels + bronchialepithelium/tissue layers – but recently a recurrent translocation in this lesions was discorvered – true neoplasm CHORISTOMA – heterotopic cell/tissue – Eg.: small nodules of normal pancreas tissue within the submucosa of the stomach, duodenum, small bowel (Meckel diverticulum) CHARACTERISTICS OF NEOPLASMS Dignity of a neoplasm: this is the behaviour. (What can we expect from this neoplasm?) This is one of the first questions what the clinician ask from the pathologists, and the patient from the clinician. BENIGN or MALIGNANT? (its a drastic simplification of the things) Benign: – – – – – – well circumscribed capsule (true or pseudo) expansile growth differentiated cells/tissues do not metastatise (rare exceptions) do not usually recur Malignant: – infiltrative growth – destructive or pushing – may, or may not have capsule – variable differentiation – may metastatise – easily recur locally Behaviour of a certain neoplasm is infuenced by numerous factors hidden in the tumour or the surrounding host tissues. The rules above are just general, not necessarily true in all the cases. Characteristics Differentiation/anaplasia Benign Malignant Well differentiated; structure Some lack of differentiation with sometimes typical of tissue of origin anaplasia; structure often atypical Rate of growth Usually progressive and slow; may come to a standstill or regress; mitotic figures rare and normal Erratic and may be slow to rapid; mitotic figures may be numerous and abnormal Local invasion Usually cohesive expansile welldemarcated masses that do not invade or infiltrate surrounding normal tissues Locally invasive, infiltrating surrounding tissue; sometimes may be seemingly cohesive and expansile Metastasis Absent Frequently present; the larger and more undifferentiated the primary, the more likely are metastases Benign tumors Malignant tumors Differentiation status of the tumors Benign: usually differentiated, cells/tissues are resemble to the normal counterpart Malignant, variable: well differentiated, moderately differentiated, poorly/undifferentiated (this is the basic principle of grading malignant neoplasms. Poorly or undifferentiated tumors show the signs of ANAPLASIA. Anaplasia (lack of differentiations), these tumors develop from undifferentiated „CANCER STEM CELLS” Well differentiated tumors Well, poorly or undifferentiated tumors Well differentiated malignant tumors: • Cancer cells are very similar, they are morphologically close to the normal corresponding cells • They may secrete/elaborate the same proteins/hormons/biogenic amines than the normal cells • These are useful biomarkers for the clinical and laboratory diagnosis Eg.: • produced hormons: insulin, glucagon, gastrin (NETs), pituitary stimulating hormons, beta HCG (choriocarcinoma), AFP (teratoma), NSE, chromogranin (tumors of the PNS, NETs), NA, A (tumors of the adrenal medulla -pheochromocytoma), PTH (parathyroid adenoma), calcitonin, procalcitonin (MTC, medullary carcinoma of thyriod Poorly differentiated/undifferentiated tumors: „Despite the exceptions, the more rapidly growing and the more anaplastic a tumor, the less likely it will have specialised functional activity” Ancillary technics should be applied to define the „line of differentiation” (IHC, ISH, molecular technics). Characteristics of anaplasia (anaplastic tumors) • • • • • • • • • • pleomorphism (polymorphism, variation in size and shape of the cells) anisonucleosis (irregular nuclear shape, variably sized, coarsely clumped chromatin to the nuclear membrane) hyperchromatism (dark staining nuclei) enlarged nuclei (nuclear/cytoplasm ratio is 1:1 instead of the normal 1:4; 1:6) anisochromasia (variable chromatin content and staining) large nucleoli (activated nuclei) mitoses (large number, atypical figures: tripolar, multipolar) loss of polarity (mainly in epithelial tumors, orientation of the cells is disturbed) tumor giant cells (polymorphic, large or polylobated, multiple nuclei, not to be mistaken with the multinucleated inflammatory giant cells) presence of mainly central coagulation type of necrosis Anaplasia METAPLASIA and DYSPLASIA Metaplasia: • „replacement of a cell type with another one, which later is not characteristic of the actual/corresponding site” • almost always found in association with tissue damage or repair • the „new metaplastic” cell type is more suited for the environmental change • EXAMPLES: Barett metaplasia (gastric or intestinal epithelium in the lower part of oesophagus), squamous cell metaplasia of the cervical glands, that of the gallbladder, bronchial respiratory epithelium Dysplasia: • altered, „not normal” growth of cells • often occures in metaplastic epithelium • often in the near of carcinomatous foci (flanking region) • mainly in epithelial structures (but in haemopoetic cells as well) • morphology of dysplasia: loss of uniformity of cells, disturbed orientation, pleomorphism with large hyperchromatic nuclei, loss of normal maturation. Eg.: • In the cervical squamous epithelium: CIN I-II-III (grades of dysplasia), in Barrett’s epithelium, in the larynx, in adenomatous polyps of GIT, etc. DYSPLASIA Rate of tumor cell growth • Rate of tumor growth is determined by – doubling time of tumor cells – replicative (proliferative) fraction of the tumor – death rate of the tumor cells • • The doubling time of tumor cells is highly variable Growth fraction: experimental data majority of the cells in early/submicroscopic stage are in the proliferative fraction As the tumour grows, the proliferation fraction is decreasing A clinically detectable tumour shows cca. 20% of proliferation fraction Tumours with the highest proliferative rate: Burkitt lymphoma, AL, SCLC, NBoma • • • • • • • Growth fraction of tumours has profound effect on susceptibility to chemotherapy Chemotherapy is effective on tumour cells in cycle. The smaller the tumour the higher the growth fraction. That’s the reason of usefulness of the DEBULKING. Growth rate is not constant, it is changing, eg. UTERINE leiomyoma: over the span of years it grows slowly in menopause stops growing fibrosis/calcification in pregnancy cell growth speed up. Local invasion of tumors • • • • • Benign tumours expansil growth, capsule formation (from the surrounding atrophized stroma), pseudocapsule formation (compressed surrounding host tissue). Exceptions: pleomorph adenoma, pituitary adenoma, fibromatosis. Malignant tumours infiltrative growth, beside metastasis this is one of the most reliable factor for malignancy. Malignant tumor penetrate the wall of colon, uterus, bladder. Brakes through the surface of skin Metastasis: • Malignant tumours can metastasize, all of them (with rare exceptions) • Exceptions: glioma, BCC do not metastasize. Types of Metastases • • • • Seeding of body cavities/serous membranes. Peritoneal: ovarium cc., GIST, pseudomyxoma peritonei Pleural: breast and lung cc. Pericardial: melanoma, breast and lung cc., SCC of head and neck. Lymphatic spread Almost all cancers can spread through the lymphatics eg. Breast cc. upper outer quadrant axillary LN, medial quadrant internal mammary artery Concept of sentinel lymph nodes (breast cc., melanoma). Tumours like to metastasize to the first „filtrating” lymph node, that’s the sentinel lymph node examination of sentinel lymph nodes may prevent the unnecessary extensive axillary surgery with the possible axillary morbidity. Exceptions: SKIPPING metastasis due to fibrosis or inflammatory obstruction of lymphatics. Hematogenous spread Portal type metastasis to the liver (GIT, eg. CRC, GIST) Cava type metastasis to the lung (kidney, soft tissues, liver, etc.) Paravertebral plexus type vertebrae (prostate adenocarcinoma, thyroid cancers) Invasion of great veins and continuus spread in the lumen (RCC, HCC) Types of Metastases EPIDEMIOLOGY • • study of cancer incidence/deaths in geographical, cultural, race relations contributes substantially to the knowledge about the origin/pathogenesis INCIDENCE (occurence) of a cancer MORTALITY RATE (death) of a cancer 2008, USA: about 1.4 million new cancer cases about 566.000 deaths from cancer cancer deaths represented 23% of all mortality (surpassed only by deaths caused by CARDIOVASCULAR diseases) Frequency: Women: BREAST CANCER, LUNG CANCER, COLORECTAL CANCER Man: PROSTATIC CANCER, LUNG CANCER, COLORECTAL CANCER These above constitutes more than 50% of cancer diagnoses and deaths 2011, Hungary: Mortality rate for cancer: 333,7/100.000 people For cardiovasculare diseases: 644,3/100.000 people EPIDEMIOLOGY Incidence of cancer in the USA is increased over the XX. century, but at 1995 the overall cancer incidence rate in man and in women have stabilized (did not increase) and the death rate has decreased 18,4% in man, and 10,4% in women. It was due to – decreased use of tobacco: it is responsible for the decreased lung cancer death rate – improved detection/treatmant: it is responsible for the decrease in death rates in CRC, female breast cancer, prostate cancer – in the last half century: a decline in cervical cancer deaths was due to the application of PAP smear – reduced number of stomach cancer deaths: was caused by the better food preservation methods and change in the dietary habits – death from primary liver cancers: increased (doubled) from 1970 due to the increased incidence of HCV infection Daganatos halálozás, 2011 C00–D48 C00–C15 C16 C18 C19–C21 C22–C24 C25 C33–C34 C91–C95 Daganatok Ajak, szájüreg, garat, nyelőcső rosszindulatú daganata Gyomor rosszindulatú daganata Vastagbél rosszindulatú daganata Végbél rosszindulatú daganata Máj, epehólyag, epevezetékek rosszindulatú daganata Hasnyálmirigy rosszindulatú daganata A légcső, hörgő és tüdő rosszindulatú daganata Fehérvérűség Összes egyéb daganatok Férfi, nő együtt 36 60 163 699 3 194 8 585 9 276 11 261 33 274 – – 1 45 436 952 429 227 2 090 – 1 8 42 137 324 472 717 1 701 – 1 10 44 171 587 919 1 563 3 295 – – 4 31 114 388 518 704 1 759 – 1 3 11 111 308 435 570 1 439 – 1 2 26 154 476 540 651 1 850 – – 9 109 997 2 943 2 593 1 882 8 533 16 20 11 44 18 81 26 230 68 686 154 1 754 268 2 147 387 2 926 948 7 888 MOLECULAR BASIS OF CANCER DEVELOPMENT FUNDAMENTAL PRINCIPLES 1. Nonlethal genetic demage (due to environmental agents like chemicals, irradiation, viruses or inherited problems in the germ line). 2. Clonal expansion of a single precursor cell (monoclonal proliferation) 3. Principle targets of genetic demage • Protooncogens (normally they are growth promoting gens, mutant forms considered to be dominant) • Tumor suppressor genes (phisiologically blocks cell proliferation, usually both allels should be mutated/deleted) • Apoptosis regulator genes (regulates programmed cell death, could be suppressors or oncogenes) • Genes involved in DNA repair (do not transform cells directly, but indirectly influence the repair of other genes. „Mutator phenotype” → cells with mutation in DNA repair genes) • Micro RNAs → regulatory small RNA molecules Fundamental changes which together determine malignant phenotype A. SELF SUFFICIENCY in GROWTH SIGNALS (no external stimuli is needed for the activation) B. INSENSIVITY TO GROWTH INHIBITORS C. ESCAPE FROM APOPTOSIS D. LIMITLESS REPLICATIVE POTENTIAL E. SUSTAINED ANGIOGENESIS F. ABILITY TO TO INVADE AND FORM METASTASIS G. INABILITY TO REPAIR DNA DEMAGE ONCOGENES Oncogenes → genes that promote autonomous cell growth Protooncogenes → unmutated cellular counterpart of oncogenes, which have important functions in promoting cell cycle. Oncoprotein → product of oncogenes, which plays a role in cancer development, they are often devoid of internal regulatory elements. What are these genes/proteins in the reality? – Growth factor – Growth factor receptor – Proteins involved in signal transmission – Nuclear regulatory proteins, which initiate DNA transcription – Cell cycle regulators Category GROWTH FACTORS PDGF-β chain Proto-oncogene Mode of Activation Associated Human Tumor SIS (official name PBGFB) Overexpression Fibroblast growth factors HST1 INT2 (official name FGF3) Overexpression Amplification TGF-α TGFA Overexpression HGF GROWTH FACTOR RECEPTORS EGF-receptor family HGF Overexpression Astrocytoma Osteosarcoma Stomach cancer Bladder cancer Breast cancer Melanoma Astrocytomas Hepatocellular carcinomas Thyroid cancer ERBB1 (EGFR), ERRB2 Overexpression Squamous cell carcinoma of lung, gliomas FMS-like tyrosine kinase 3 Receptor for neurotrophic factors FLT3 RET Amplification Point mutation Point mutation Breast and ovarian cancers Leukemia Multiple endocrine neoplasia 2A and B, familial medullary thyroid carcinomas PDGF receptor Receptor for stem cell (steel) factor PDGFRB KIT Overexpression, translocation Point mutation Gliomas, leukemias Gastrointestinal stromal tumors, seminomas, leukemias Point mutation Colon, lung, and pancreatic tumors HRAS NRAS Point mutation Point mutation Bladder and kidney tumors Melanomas, hematologic malignancies Nonreceptor tyrosine kinase ABL Translocation Chronic myeloid leukemia Acute lymphoblastic leukemia RAS signal transduction WNT signal transduction BRAF β-catenin Point mutation Point mutation Overexpression Melanomas Hepatoblastomas, hepatocellular carcinoma C-MYC N-MYC Translocation Amplification PROTEINS INVOLVED IN SIGNAL TRANSDUCTION GTP-binding KRAS NUCLEAR-REGULATORY PROTEINS Transcriptional activators L-MYC Amplification Burkitt lymphoma Neuroblastoma, small-cell carcinoma of lung Small-cell carcinoma of lung CELL CYCLE REGULATORS Cyclins Cyclin D Cyclin-dependent kinase Cyclin E CDK4 Translocation Amplification Overexpression Amplification or point mutation Mantle cell lymphoma Breast and esophageal cancers Breast cancer Glioblastoma, melanoma, sarcoma GROWTH FACTOR/GROWTH FACTOR RECEPTOR – Mutations converts these genes (protooncogenes) to oncogenes, which are constitutively active. Eg.: – Glioblastoma → synthesize PDGF and express PDGFR (the recept protein), which make them responsive for they own growth factors – Many sarcomas are able to elaborate TGFα and it receptors TGFαR GROWTH FACTOR RECEPTORS • • • • Most important growth factor receptor class: the TRANSMEMBRANE RECEPTOR PROTEINS with cytoplasmic TYROSIN KINASE DOMAIN Normal function: GF binds to GF receptor → activation → phosphorylation of substrates → signal transduction Oncogenic versions of receptors are constitutively activated (able to work without binding substrate) by mutations, gene rearrangement, overexpression of the gene Result: permanent signal independently of growth factors - RET protooncogene (receptor tyrosin kinase for gial cell derived neurotropic factor) - Normally expressed in neuroendocrine cells (parfolliculare C-cells, adrenal medulla cells, parathyroid cells) - RET germ line point mutation: MEN2a → RET extracellular domain, MTC+phaeochromocytoma+parathyreoid adenoma, MEN2b → RET cytoplasmic catalytic domain, MTC+pheochromocytoma Familiar medullary thyreoid carcinoma, multinodular MTC only - RET somatic point mutation, sporadic MTC - FLT point mutation → myeloid leukaemia - t(5-12) (PDGFR/ETS fusion) → CMyMOL - ~85% of GISTs KIT or PDGFRα mutation, constitutive activation of receptor tyrosin kinase - Good bases for targeted therapy: IMATINIB MESILATE, sunitinib etc. Overexpression of normal forms of growth factor receptors Her2/Neu (17q22) high amplification – More common than mutation – Due to gene amplification Example: ERBB1 (EGF receptor gene): Overexpressed in 80% of lung SCC-s! Overexpressed in more than 50% of GLIOBLASTOMAS 80-100% of HEAD and NECK carcinomas ERBB2 (HER2/neu, also an EGF receptor family genes) amplified in 15-25% of BREAST carcinomas, adenocarcinomas of OVARY, LUNG, STOMACH, SALIVARY GLAND Utilized in therapy of breast carcinoma, monoclonal antibody against HER2 called HERCEPTINE, which is another example of targeted therapy GENES/PROTEINS IN SIGNAL TRANSDUCTION – – – – RAS protooncogene, located on the inner surface of plasma membrane, endoplasmic reticulum and Golgi membrane ras protein → GTP binding protein (G-protein) There are three RAS in the human genom: KRAS, NRAS, HRAS Originally discovered in transforming retroviruses MUTATION IN RAS and RAS SIGNALING PROTEINS – – – – – – Point mutation of RAS family genes → most common, about 15-20% of human cancers contain one of the mutated version. 90% of pancreas adenocarcinomas, cholangiocellulare carcinomas → KRAS mutation 50% of CRC, endometrial carcinoma thyroid carcinoma (follicular) → KRAS mutation 30% of lung adenocarcinomas, myeloid leukaemias show RAS mutation Bladder cancers → HRAS mutation Haemopoietic tumors → NRAS mutation Place of point mutation: 1. In the GTP binding pocket, 2. In the enzymatic region essential for GTP hydrolysis Mutated RAS remains activated → contributes cell proliferation – – – – – Mutation of GAPs (GTP-ase activating proteins) may mimic the effect of RAS mutation As in case of neurofibromatosis type 1 NF1 product → neurofibromin, it is a GAP Mutations of the RAS downstream signaling cascade: RAS/RAF/MAP kinase Mutations in BRAF (RAF family) is detected in 60% of melanomas ALTERATIONS in NONRECEPTOR TYROSIN KINASES – – – – – – In CML and ALL → c-ABL tyrosin kinase ABL gene is translocated to BCR gene → chimeric gene BCR/ABL t(9-22), Philadelphia chromosome detection: karyotyping, FISH, PCR IMATINIB MESILATE (Glivec) inhibits the fusion tyrosin kinase protein which is another example of TARGETED THERAPY In PV and PMF (progressiv mylofibrosis) → activating mutation of JAK2 nonreceptor tyrosin kinase gene BCR-ABL1 translocation (9;22)(q34.1;q11) bcr/abl RT-PCR Alterations in nuclear transcription factors MYC, MYB, JUN, FOS, REL – – – – MYC is most commonly involved in human tumors Belongs to immediate early response gene → becomes rapidly induced when resting cells receive proliferation signal MYC function is not entirely understood Range of activities modulated by MYC – Histon acetylation – Reduced cell adhesion – Increased cell motility – Increased telomerase activity – Increased protein synthesis – Decreased proteinase activity – Other changes – MYC is one of the handful transcription factors, that can reprogram somatic cells back into pluripotent stem cells – MYC activation is linked to proliferation – In the absence of growth factors MYC activation leads to APOPTOSIS in cell cultures – MYC oncoprotein has separate domains for growth promoting and apoptotic activity Role of MYC oncogene in tumors • • • • • Persistent expression, or overexpression of myc oncoprotein in tumors is common Dysregulation of MYC by translocation of the gene: t(8-14) MYC/IgH in Burkitt lymphoma MYC is amplified in breast, colon, lung carcinomas NMYC is amplified in neuroblastomas LMYC is amplified in small cell lung cancers (SCLC) MYCN amplification CELL CYCLE REGULATORS CELL CYCLE REGULATORS A. Cyclins/cyclin dependent kinases (cyclin/CDK) → drive cell cycles -Mishaps in cyclin D/CDK4 complex → COMMON EVENT in neoplastic trasnsformation -Cyclin D genes → overexpression in many cancers like: breast, oesophagus, liver, lymphomas -CDK4 gene amplification → in melanomas, sarcomas, glioblastomas -Cyclin B, E, other CDK mutations → much rare B. Cyclin dependent kinase inhibitors (CDKI) → blocks cell cycle by blocking cyclin/CDK complexes -CDKI-s → normally silence the CDK-s → negative control on cell cycle -They are p21, p27, p57 (CIP/WAF family) → inhibit cyclinE/CDK2, cyclinA/CDK1, cyclinA/CDK2 -Or p16, p15, p18, p19 (INK4 family) → inhibit cyclinD/CDK4, cyclinD/CDK6 -Frequently mutated or otherwise silenced in human malignances -Germline mutation of p16 → associated with 25% of melanoma-prone children -Somatic deletion or inactivation of p16 → 75% of pancreas cc, 40-70% of glioblastoma, 50% of oesophageal cc, 20-70% of ALL, 20% of NSCLC TUMOR SUPPRESSOR GENES Cell cycle checkpoints: there are two: G1/S and G2/M – – – – – – G1/S → checks for DNA demage G2/M →checks for DNA replication and monitors whether it is safe to let the cell into mitosis It is particularly improtant in the cells, which are expressed to ionizing irradation These checkpoints are regulated by tumor suppressor genes Tumor suppressor genes are brakes in the cell proliferation, their product are tumor suppressor proteins → form a kind of network of chekpoints that prevent uncontrolled growth Several important tumor supressor genes: – RB, p53, APC/β-catenin, NF1, NF2, VHL, WT1/WT2 Gene Function Tumors Associated with Somatic Mutations Tumors Assocated with Inherited Mutations TGF-β receptor Growth inhibition Carcinomas of colon Unknown E-cadherin Cell adhesion Carcinoma of stomach Familial gastric cancer Inner aspect of plasma membrane NF1 Inhibition of RAS signal transduction and of p21 cell Neurofibromas, GIST cycle inhibitor Cytoskeleton NF2 Cytoskeletal stability Schwannomas and meningiomas APC/β-catenin Inhibition of signal transduction Carcinomas of stomach, Familial adenomatous colon, pancreas; melanoma polyposis coli/colon cancer PTEN PI3 kinase signal transduction Endometrial and prostate cancers Cowden syndrome SMAD2 and SMAD4 TGF-β signal transduction Colon, pancreas tumors Unknown RB1 Regulation of cell cycle Retinoblastoma; osteosarcoma carcinomas of breast, colon, lung Retinoblastomas, osteosarcoma p53 Cell cycle arrest and apoptosis in response to DNA damage Most human cancers Li-Fraumeni syndrome; multiple carcinomas and sarcomas WT1 Nuclear transcription Wilms' tumor Wilms' tumor P16/INK4a Regulation of cell cycle by inhibition of cyclindependent kinases Pancreatic, breast, and esophageal cancers Malignant melanoma Unknown Carcinomas of female breast and ovary; carcinomas of male breast Subcellular Locations Cell surface Cytosol Nucleus BRCA1 and BRCA2 DNA repair Neurofibromatosis type 1 and sarcomas Neurofibromastosis type 2, acoustic schwannomas, and meningiomas RETINOBLASTOMA GENE (RB) – – – – – – – RB gene, the first tumor suppressor gene, maps to 13q14 locus, found at first in retinoblastoma Retinoblastoma: tumor of the eye (retinoblasts) in children, AD inheritance of the gene Approximately 60% of retinoblastomas are sporadic, 40% are familial Sporadic: two somatic mutations, hereditary/familial: germline mutation+somatic mutation 1970 Knudson: „Two-hit hypothesis of oncogenesis” A child carrying one inherited mutant RB allele in all somatic cells is perfectly normal at phenotypical level, she/he is heterozygous for the defect allele Cancer developes, when the cell becomes homozygous for mutant allele → loss of heterozygosity (LOH) RETINOBLASTOMA GENE (RB) Active RB-protein → hypophosphorylated, hyperphosphorylated is the inactive form Activ protein (hypophosphorylated) controls G1/S transition by inhibiting E2F gene product, this way active protein blocks transcription If RB is mutant → becomes inactive Mutations map to the „RB pocket” of the protein, which is responsible for E2F binding Oncogenic human DNA viruses can neutralize RB protein by binding of viral proteins: HPV-E7 protein, adenovirus EIA protein, polyoma virus large T-antigen –All bind to hypophosphorylated, active form of protein p53: GUARDIAN OF THE GENOME – – – – – – p53 gene maps to 17p13.1 Over 50% of human tumors contain mutation in these gene Homozygous loss of p53 occurs: in lung, colon, breast carcinomas Mutation (point mutations, deletions, rearrangements) of the gene in both alleles → loss of function Function of p53 protein → cell cycle arrest at G1/S and G2/M phase, makes the cell repair possible, if the cell is unrepairable → it triggers apoptosis Nuclear protein, very short half life, WT-p53 can not be detected by IHC, mutant form accumulates p53: GUARDIAN OF THE GENOME – – – – – – Mutational status resulting in inactivity: two somatic or one germline+one somatic mutations p-53 germline mutation: Li-Fraumeni syndrome, 25x greater chance of developing malignant tumor by age 50 than the general population, the spectrum is wide: sarcomas, breast cancer, leukaemia, brain tumors, carcinomas of the adrenal cortex 80% of p53 point mutations in human cancers maps to DNA-binding domain of the protein Similarly to RB, transforming proteins of several DNA viruses (HPV-E6) binds to WT-p53 and inactivate, degrade it. Also MDM2 and MDMX (regulators of WT-p53) if overexpressed, accelerate p53 degradation MDM2 gene is amplified is 33% of human sarcomas Other tumor suppressor genes NF1 gene, maps to chr. 17, it’s product called neurofibromin → it is a GAP (GTP-ase activating protein) • Neurofibromin facilitates GTP-active-RAS to GDP-inactive-RAS transition • Related syndrome: neurofibromatosis type 1 (Recklinghausens disease) • 1882, von Recklinghausen, 1:2500-3000, AD, high penetrance, in 50% there is new mutation, deletion, (more, than 200 types of mutations, insertions or deletions in the NF-1 gene) • Clinical setting: 2 or more of the following criteria are diagnostic to NF-1 -six or more café au lait -two or more neurofibromas (of any type) -one plexiform neurofibroma, -axillary or inguinal pigmentation -optic glioma, -two or more Lisch nodules on the iris -bone lesion (sphenoid dysplasia, kyphoscoliosis), -NF-1 in first degree relatives Other tumor suppressor genes NF2, Neurofibromatosis type 2, maps to chr. 22, it’s protein product is merlin – Characterised by acoustic nerve Schwannomas (bilateral) – Somatic mutations affecting both allels of NF2 have also been found in sporadic meningeomas and ependymomas VHL, von Hippel-Lindau gene maps to chr. 3p – syndrome: von Hippel-Lindau syndrome – Characterised by hereditary RCC, phaeochromocytoma, haemangioblastoma of the CNS, retinal angiomas, renal cysts – Mutations of VHL also found in sporadic RCC-s – The gene product is VHL protein – In the presence of oxygen, HIF1α binds to VHL protein leading to proteosomal degradation – In hypoxia HIF1α does not bind to VHL, travels to the nucleus, turns on many genes responsible for cellular growth and angiogenesis, like VEGF and PDGF → vascular proliferation Other tumor suppressor genes WT1, locates on chr. 11p13, associated with development of Wilms’ tumor (nephroblastoma) – Mutational inactivation of WT1 has been seen in inherited and sporadic form of Wilms’ tumor – WAGR syndrome: germline del. WT1, Wilms +Aniridia +Genital abnormalities +mental Retardation (chance for Wilms is 33%) – Second hit: somatic mutation of the gene – WT1 protein is a transcriptional activator, which plays important role in renal and gonadal differentiation – Regulates the mesenchymal-to-epithelial transition, that occures in kidney development – Danys-Drash syndrome: 90% chance to have Wilms, germline mutation of WT1 gene Wilms+gonadal dysgenesis (male pseudohermaphroditism) +early nephropathy (diffuse mesangial sclerosis) + increased risk of gonadoblastoma – Germline mutation is enough for development of genitourinary abnormalities but not for Wilms. Development of nephroblastoma needs inactivation of the other allele. – Only about 15% of patients with nonsyndromic Wilms tumor has WT1 mutation Another Wilms’ tumor gene is WT2, which locates on 11p15.5, and its associated with BeckwithWeidemann syndrome characterized by hemihypertrophy +macroglossia +organomegaly +omphalocele +adrenal cytomegaly Chemical cancerogenesis • • Animal model for chemical cancerogenesis Mouse skin cancer (SCC) INITIATION and PROMOTION phases basic model of „multistep” cancerogenesis – INITIATION: by initiators, which causes permanent DNA damage alone is not sufficient to produce tumor highly electrophilic agents bind to DNA, RNA, proteins they could be direct acting or indirect acting Direct acting require no metabolic conversion for it’s cancerogenic potential they are week cancerogenes chemotherapeutic drugs (alkylating agents) useful drugs in controlling/treating certain type of tumours (leukemia, lymphoma, ovarian cc.). Alkylating agents can cause AML!!! Indirect acting require metabolic conversation by eg. cytochrom P450 polycyclic hydrocarbons: present is fossil fuels, present in cigarette smoke (benzpyrene), present in animal fats after grilling/boiling aromatic amine, azo-dyes formerly widely used in dye and rubber industry Molecular targets of chemical cancerogenes • • • • Initiators are mutagenic DNA is the primary target in chemical cancerogenesis Any of the genes could be mutated Particularly important targets are RAS, p53 Eg. AFLATOXIN B1 (from Aspergillus strains) increases the incidence of HCC in Africa – Aflatoxin B1 causes p53 mutation in codon 249 (G:C T:A, called 249 (Ser) p53 mutation – Signature mutation – Vinyl-chloride, Arsenic, Nickel, Chromium, insecticides, fungicides, polychlorinated biphenyles all are potential cancerogenes in workplace and at home – Nitrites used as food preservatives nitrosylation of amines NITROSAMINE CANCEROGENIC COMPOUND Radiation cancerogenesis • • • • • • • • Radiant energy independently it’s forms (UV ray, sun, ionising electromagnetic, particulate) is well established to be cancerogenic UV-light skin cancers SCC, BCC, melanoma Ionising irradiation (medical, occupational, accidental like nuclear bomb or nuclear catastrophes) cause a variety of cancers Effect of UV-light depends on the 1. type of UV-light 2. intensity of exposure 3. quantity of protective melanin in the skin White skinners, patients living in „high exposure” places, like Australia are at highest risk Nonmelanoma cancers (SCC, BCC) are associated with total cummulative exposure to UV radiation Melanomas are associated with intense intermittent UV exposure (sunbath) Sunlight’s UV spectrum: UVA (320-400 nm), UVB (280-320 nm), UVC (200-280 nm) The UVB is believed to be responsible for skin cancers. UVB cancerogenecity is attributed to formation of pyrimidin (timin) dimers in DNA – It is postulated that with increased exposure the capacity of the repair is overwhelmed. – DNA repair is extremely important in protection (nucleotid excision repair). – Hereditary disease Xeroderma pigmentosum (high frequency of skin cancers) underlies the importance of DNA repair Radiation cancerogenesis • • • • • Ionising radiation (X-ray, γ-ray) , particulate radiation (α, β, proton, neutron) are all cancerogenic X-ray pioneers developed skin cc. Uranium miners in CE, USA have 10x risk of lung cc. Inhabitants at Hiroshima/Nagasaki the follow up of these people revealed increased risk of leukaemia (AML, CML, 7 years after the event), later increased risk of breast, colon, lung, thyroid cc. Chernobyl increased risk of thyroid cc. (I131 isotop). Microbial carcinogenesis • • • RNA virus (HTLV-1, HCV) DNA viruses (EBV, HPV, HBV) Bacteria (Helicobacter pylori) RNA viruses • HTLV-1 (Human T-cell Leukaemia Virus) This is the only retrovirus, sufficiently proved to be oncogenic is human. • HTLV-1 causes T-cell leukaemia/lymphoma that is endemic in Japan and the Caribbean Islands • Sporadic in the USA • HTLV-1 has tropism for CD4 positive cells (similarly to HIV) this is the major target of cancerogenesis here. • It has a latency from primary infection which is about 40-60 years. • Human infection occurs after – SEXUAL intercourse – BLOOD transfusion – BREAST FEEDING • Tumorigenesis is not clear • In leukaemic cells the virus is found to be integrated – No oncogene is identified, no predilection sites of integration – Viral integration is clonal, identical in all the leukemic tumor cells – TAX gene could be the transforming gene Microbial carcinogenesis: DNA viruses EBV (Burkitt ly. NPC, Hodgkin) HPV (cervical cc., oropharyngeal cc., laryngeal cc.) HBV (HCC) HHV8 (Kaposi sarcoma virus, Kaposi sarcoma, PEL) Merkel cell polyoma virus Oncogenic DNA viruses HPV (Human papilloma virus) – At least 70 different genotypes. – Low risk viruses HPV1, 2, 4, 7 cause benign squamous lesions (papilloma, wart) HPV 6, 11, episomal localisation, lesions with low malignant potential (papilloma, CIN I.) – High risk viruses HPV 16, 18, 31, 33, 51 integrated to the host DNA malignant transformation • site of integration is „random”, variable from case to case, but the pattern is clonal (in the same place in all tumor cells of the same neoplasm) • the cells with integrated viral DNA show genomic instability. • malignant squamous cell lesions like SCC the cervix, anogenital or oropharyngeal SCC. Mechanism of oncogenesis: E7 oncoprotein acts on RB protein (deactivates RB protein) inactivate P21, P27 (CDKI-s) increase cell proliferation E6 oncoprotein acts on WTp-53 protein Infection with HPV itself is not sufficient for carcinogenesis HPV infection in cell cultures transfected HPV types 16, 18, 31+ mutant RAS transfection full malignant transformation. EBV (Epstein-Barr Virus) EBV (Ebstein-Barr Virus) • Burkitt lymphoma • B-cell lymphomas in immunodeficient host (mainly in those with HIV infection) • Hodgkin’s lymphoma • NPC (nasopharyngeal carcinoma) • some gastric carcinomas • rare NK/T cell lymphomas • • • EBV infects B cells and epithelial cells of oropharyngx through CD21 (complement receptor) Infection is latent (means no viral replication, no cell necrosis is seen) B-cells are immortalized polyclonal B-cell proliferation (autonomous without TH cells) EBV-Oncogenes: LMP1 (latent membrane protein-1) activates NF-κB and JAK (STAT signalling) behaves like a constitutively active CD40 receptor EBNA-2 encodes a protein which behaves like a constitutively active Notch receptor transactivate cyclin D Result: proliferation of the virus infected, polyclonal, immortalized, EBV-harbouring B-cell population – Clinically it may be SILENT or prominent called MONONUCLEOSIS INFECTIOSA – This was the first step in cancerogenesis – 2nd step: genetic involvement of c-myc oncogene – by translocations: t(8;14) (c-myc/IgH), t(8;22), t(2;8) EBV (Epstein-Barr Virus) Burkitt lymphoma High grade/agressive B-cell lymphoma Most common tumour in childhood in Central Africa and New Guinea African type: 90-100% association with EBV European type: 15-20% association with EBV EBV (Epstein-Barr Virus) • • B-cell lymphoma of immunodeficient patients HIV positive AIDS patients, in transplant patients Starts as polyclonal becomes monoclonal express EBNA2, LMP-1 Nasopharyngeal carcinoma – Endemic in South China, in some parts of Africa, in Inuit population of Arctic – 100% of NPC contains EBV DNA – clonal viral integration – antibody to EBV VCA is greatly elevated – EBV plays central role in the genesis – genetic or environmental cofactors also play important role in tumorigenesis – LMP-1 expression – LMP-1 activates NF-KB pathway, and also activates VEGF, FGF2, MMP9, COX2 HBV, HCV (Hepatitis B and C Viruses) • • • • • • • • • • • • • • Close association of HBV and hepatocellular carcinoma (HCC) cca.: 70-85% of HCC is due to HBV or HCV infection HBV and HCV genomes do not harbour oncoproteins HBV is endemic in countries of Far East and Africa these have the highest incidence of HCC HBV is integrated to the genome there is no consistent pattern of integration oncogenic effect of HBV, HCV multifactorial immun-mediated chronic inflammation hepatocyte death regeneration (at cellular level) cirrhosis HCC molecular pathogenesis is not clear one of the key molecular steps in infected hepatocytes is: activation of NF-κB blocks apoptosis proliferating/regenerating hepatocytes accumulate mutations The HBV genome contains a gene called HBx may activate a variety of transcription factors and members of cell signaling HCV RNA virus much less understood chronic liver cell demage regeneration HCV core protein may have a role in tumorigenesis Helicobacter pylori • • • • • • • • The first bacterium which was implicated in carcinogenesis HP infection key role in gastric adenocarcinomas and gastric lymphomas (MALT lymphoma) chronic unresolved/persistent inflammation mucosal atrophy cellular regeneration (proliferation) genotoxic agents intestinal metaplasia dysplasia cancer this sequence of events takes decades and only in 3% of the affected individuals H. pylori genome contains pathogenecity islands CagA (cytotoxin-associated gene A) initiation of signal in cascade mimics unregulated GF stimulation MALT lymphomas development is not fully understood H.pylori infection HP reactive T-cells (immunresponse) stimulate polyclonal B-cell proliferation accumulation of mutations „monoclonal” MALToma (proliferation of „tumour cells” remain dependent on T-cell stimulation of B-cell pathways) at this stage the tumour is reversible, eradication of H.pylori by antibiotics removes the antigen stimulus for Tcells stops proliferation the tumour disappear at later stages: additional mutations like t(11;18) renders NF-κB constitutively active H.pylori is no more needed for progression. Multistep cancerogenesis: CRC • • • • • Epidemiology and research data indicate: this is a multistep process Full genom sequencing of tumors (breast, CRC) revealed: an average 90 mutant gene 11 from above genes are mutated in high frequency A single gene does not transform the non-immortalized cells, but several together can Eg.: ras+myc together are able to transform fibroblasts in cell culture Clinical aspects of neoplasia • • Effect of neoplasm on the host (patients) Clinical problems, even in the case of a benign tumor due to – Location of the tumor compression of the surrounding tissues, dislocation, effect on local organs) • Small pituitary adenoma compresses, destroys surrounding normal gland PANHYPOPITUITARISM • primary or metastatic tumour in an endocrin gland may couse endocrine insufficiency • neoplasm in GIT enlarge obstruction ileus – Functional activity (hormons, paraneoplasia) • hormone production rather in benign tumors or well differentiated malignant tumours, eg. INSULOMA insulin production of even a small adenoma may cause even fatal HYPOGLYCAEMIA – Bleeding, infections (erosion, ulceration) • GIT tumours, urinary passage tumours, airways tumours melaena, haematuria, haemoptisis, blood aspiration – Rupture or necrosis of the tumor Clinical aspects of neoplasia – Cachexia • common event • loss of body fat and weight loss of fat and also muscle • profound weakness • anorexia • anaemia In cachexia the basal metabolic rate is increased (contrary to starvation, where the basal metabolic rate is decreased, which is an adaptive reaction). Cachexia is due to certain cytokin production, like TNF (tumour necrosis factor), produced by macrophages in response to tumour cells. – TNF Mobilizes fat from stores, reduces appetite In conjunction with TNF, IL1, IF γ also plays important role in development of cachexia. They are synergistic. Reduce proteins synthesis and stimulate protein catabolism (through the activation of ATP-dependent ubiquitin proteasome pathway) 1/3 of death in cancer is due to cachexia and not the tumor burden itself. Paraneoplastic syndromes • Symptom complexes, which can not be explained by local/metastatic spread of the tumour or hormone production of the host tissue where the tumour arose. Important to recognize because: • It may represent the earliest manifestation of an occult neoplasm • Maybe clinically significant lading to death • May mimic metastatic (systemic) disease Paraneoplastic syndromes: Ectopic hormone production Hypercalcaemia Neuromyopathies Acanthosis nigricans Hypertrophyic osteoartropathy Vascular/haematologic manifestations. Clinical Syndromes ENDOCRINOPATHIES Cushing syndrome Syndrome of inappropriate antidiuretic hormone secretion Hypercalcemia Hypoglycemia Carcinoid syndrome Polycythemia NERVE AND MUSCLE SYNDROMES Myasthenia Disorders of the central and peripheral nervous system DERMATOLOGIC DISORDERS Acanthosis nigricans Major Forms of Underlying Cancer Causal Mechanism Small-cell carcinoma of lung ACTH or ACTH-like substance Pancreatic carcinoma Neural tumors Small-cell carcinoma of lung; intracranial neoplasms Antidiuretic hormone or atrial natriuretic hormones Squamous cell carcinoma of lung Breast carcinoma Renal carcinoma Adult T-cell leukemia/lymphoma Ovarian carcinoma Fibrosarcoma Other mesenchymal sarcomas Hepatocellular carcinoma Bronchial adenoma (carcinoid) Pancreatic carcinoma Gastric carcinoma Renal carcinoma Cerebellar hemangioma Hepatocellular carcinoma Parathyroid hormone–related protein (PTHRP), TGF-α, TNF, IL-1 Bronchogenic carcinoma Breast carcinoma Immunological Gastric carcinoma Lung carcinoma Uterine carcinoma Dermatomyositis Bronchogenic, breast carcinoma OSSEOUS, ARTICULAR, AND SOFT-TISSUE CHANGES Hypertrophic osteoarthropathy and clubbing of the Bronchogenic carcinoma fingers VASCULAR AND HEMATOLOGIC CHANGES Venous thrombosis (Trousseau phenomenon) Pancreatic carcinoma Bronchogenic carcinoma Other cancers Nonbacterial thrombotic endocarditis Advanced cancers Red cell aplasia Thymic neoplasms OTHERS Nephrotic syndrome Various cancers Insulin or insulin-like substance Serotonin, bradykinin Erythropoietin Immunological; secretion of epidermal growth factor Immunological Unknown Tumor products (mucins that activate clotting) Hypercoagulability Unknown Tumor antigens, immune complexes • • • • • • Ectopic hormon production – Cushing syndrome 50% of patients has bronchus cc. (SCLC) ACTH , corticotrophin like peptide , ACTH precursor (PROOPIOMELANOCORTIN) only in case of ectopic hormone production – Carcinoid syndrome (flush, asthmatic events, diarrhoea, endocardial fibrosis) Hypercalcaemia – Production of PTHRP (parathormon related protein) normal tissues produce in small concentrations (epithelial cells, muscles, bone tissue, ovary, lung and breast) – Carcinomas of lung (SCC of lung), breast cc. may produce Neuromyopathies – Peripheral neuropathy, cortical cerebellar degeneration, polymyopathy, myasthenic syndrome – Pathogenesis: poorly understood perhaps autoimmun reaction, autoantibodies generated against tumour cells antigens cross react with neuronal antigens. Acanthosis nigricans – Normally genetic disorder charatherised by gray-black patches on the skin verrucose hyperkeratoses in juveniles and young adults. – Over 40 years of age it appears as paraneoplastic syndrome which sometimes appears earlier than the disease itself. Hypertrophyic osteoartropathy – 1-10% of lung cancers: periosteal new bone formation on distal end of long tube bones, arthritis, clubbing of digits. Vascular/haematologic manifestations – Migratory thrombophlebitis (Trousseau syndrome): carcinoma of pancreas and lung. – DIC (APL, prostatic adenocarcinoma) – Deep vein thrombosis – NBTE (mucin-secreting adenocarcinoma) Tumour Markers • • Biochemical assays for tumour-associated enzymes, hormones, other markers in the blood may contribute to detection of a cancer, they are very useful in determining the effectiveness of therapy and the recurrency. Examples: – PSA (prostata specific antigen /prostatic adenocarcinoma/) – CEA (carcinoembryonic antigen) CRC (colorectal adenocarcinoma), pancreas cc., stomach cc. breast cc. – AFP (alphafoetoprotein) HCC, yolk sac tumour, teratocarcinoma, embryonal carcinoma – All of those markers above do not rule out and do not disclose the presence of a tumor in 100% chance. Tumor markers Laboratory diagnosis of cancer • Clinical information: extremely important – Radiation changes (skin, mucosa), regeneration (healing after bone fracture) all can mimic dysplastic changes, malignancy • Sampling: – excision biopsy (open/laparoscopic surgery), sampling errors, question of representativity – true-cut biopsy (core biopsy specimen) – FNAB (palpable lesions of breast, lymph node, thyroid, salivary gland, US/CT guided from deeper structures), less invasive, rapid – exfoliative cytology (cervical/endocervical smear/PAP staining, bronchus brush cytology, urine/sputum/CSF) • Appropriate preservation of the specimen (formaline, glutaraldehyde, ASAP) • Frozen technique: determining the nature of a mass lesion, evaluation of the resection margin • Ancillary techniques: IHC, ISH, PCR, molecular profiling Ancillary techniques • IHC: identification of cell products, intermediate filaments, surface markers – To identify line of differentiation in undifferentiated neoplasms (CK, vim., desmin, lymphoid markers) – Identification of home/organ/tissue specific antigens in metastatic tumors (PSA, thyreoglobulin) – Identification of molecules having prognostic, therapeutic significance (ER/PR, Her2, c-kit) • Flow cytometry: rapid and quantitative measurement of cell characteristics – DNA content – Membrane proteins – Useful to identify T and B cells, and other haematopoietic cells • PCR: quick and effective amplification of a given DNA sequence – clonality of a lymphoid population (T and B), indication of residual disease (CML), identification of translocations, gene mutations (KRAS, NRAS, KIT, BRAF), deletions • ISH: in situ study of gene/chromosome alterations (translocations, amplifications • CGH: study of gains and losses • Karyotyping: (the basic method of studying chromosomes) • Spectral karyotyping: (24-color) detects chromosomal changes Grading and staging of tumours • Indicates the probable clinical agressiveness of a given neoplasm • and it’s apparent extent and spread in the individual patient • Staging and grading is necessary for making an accurate diagnosis • Both are necessary for comparing the end results of various treatment protocols. • Grading of a neoplasm: the level of differentiation of tumour tissue • Staging of a neoplasm: local extents and spreading type of the cancer in a given patient. Grading of a cancer: degree of differentiation of the tumour cells, the number of mitoses and some architectural features (like formation of glands) • Grades are: low grade, high grade (two categories), low, intermediate and high grade (three categories) and grade 1, 2, 3, 4 (four categories). • Criteria for individual grades vary with each form of neoplasia • In general with a few exceptions, such as soft tissue sarcomas, grading of cancers has proved less clinical value than has staging. Staging of cancers: • 1. Based on the size of the primary lesion • 2. The extent of spread to regional lymph nodes and • 3. The presence or absence of blood born metastasis • AJCC (American Joint Committee on Cancer Staging) developed the TNM system • T stands for primary tumour, N for regional lymph node involvement and M for metastases. • T goes from T1 up to T4, T0 (no evidence of tumour), Tis (means in situ lesion), N goes N1 up to N3 indicating the involvement of lymph nodes in number and in different region, M means presence or absence of metastases (M0 or M1) Mandatory parameters T: size or direct extent of the primary tumor Tx: tumor cannot be evaluated, Tis: carcinoma in situ, T0: no signs of tumor T1, T2, T3, T4: size and/or extension of the primary tumor N: degree of spread to regional lymph nodes Nx: lymph nodes cannot be evaluated, N0: tumor cells absent from regional, N1: regional lymph node metastasis present; (at some sites: tumor spread to closest or small number of regional lymph nodes) N2: tumor spread to an extent between N1 and N3 (N2 is not used at all sites) N3: tumor spread to more distant or numerous regional lymph nodes (N3 is not used at all sites) M: presence or absence of distant metastasis, M0: no distant metastasis, M1: metastasis to distant organs Prefix modifiers c: stage given by clinical examination. The c-prefix is implicit in absence of the p-prefix p: stage given by pathologic examination of a surgical specimen y: stage assessed after chemotherapy and/or radiation therapy (neoadjuvant therapy) r: stage for a recurrent tumor in an individual that had some period of time free from the disease. a: stage determined at autopsy u: stage determined by US. Clinicians often use this modifier although it is not an officially defined one Staging of CRC Staging of bladder cancer