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Unit 6: Classification and Diversity KEY CONCEPT Species are classified into a hierarchical taxonomic system (Kingdom, Phylum, Class, Order, Family, Genus, and Species) based on Morphological, Behavioral, and Molecular similarities. Changes in the genetic make-up of populations may affect biodiversity through speciation and extinction. Unit 6: Classification and Diversity Linnaeus developed the scientific naming system still in use today. Taxonomy is the science of naming and classifying organisms. Binomial nomenclature is a two-part scientific naming system. Scientific names are often based on Latin and Greek names. Tyto = Genus name alba = epithet (identifies the specific species) Tyto alba is the species name Unit 6: Classification and Diversity When writing a scientific name, scientists use these rules: The first letter of the genus name always is capitalized, but the rest of the genus name and all letters of the specific epithet are lowercase. If a scientific name is written in a printed book or magazine, it should be italicized (Puma concolor) When a scientific name is written by hand, both parts of the name should be underlined. After the scientific name has been written completely, the genus name will be abbreviated to the first letter in later appearances (e.g., C. cardinalis). Unit 6: Classification and Diversity Scientific names help scientists to communicate and share a common language. Common names, unlike scientific names, are often very confusing and the same organism can have more than one common name. Unit 6: Classification and Diversity Linnaeus’ classification system has seven levels. • Each level is nested in the level above it. • Levels get increasingly specific from kingdom down to species. • A taxon is a group of organisms in a classification system. • The major drawback to this system is that it is based on morphological characteristics. Unit 6: Classification and Diversity Species and Genus A named group of organisms is called a taxa. A genus (plural, genera) is a group of species that are closely related and share a common ancestor. Family A family is the next higher taxon, consisting of similar, related genera. Unit 6: Classification and Diversity Higher Taxa An order contains related families. A class contains related orders. A phylum or division contains related classes. The taxon of related phyla or divisions is a kingdom. The domain is the broadest of all the taxa and contains one or more kingdoms. Unit 6: Classification and Diversity Phylogenic Species Concept Phylogeny is the evolutionary history of a species. The phylogenic species concept defines a species as a cluster of organisms that is distinct from other clusters and shows evidence of a pattern of ancestry and descent. Characters To classify a species, scientists construct patterns of descent by using characters. Characters can be morphological or biochemical. Unit 6: Classification and Diversity Morphological Characters Shared morphological characters suggest that species are related closely and evolved from a recent common ancestor. Biochemical Characters Scientists use biochemical characters, such as amino acids and nucleotides, to help them determine evolutionary relationships among species. DNA and RNA analyses are powerful tools for reconstructing phylogenies. Unit 6: Classification and Diversity The similar appearance of chromosomes among chimpanzees, gorillas, and orangutans suggests a shared ancestry. Unit 6: Classification and Diversity Molecular Clocks Scientists use molecular clocks to compare the DNA sequences or amino acid sequences of genes that are shared by different species. The differences between the genes indicate the presence of mutations. The more mutations that have accumulated, the more time that has passed since divergence. Unit 6: Classification and Diversity • Scientists estimate mutation rates by linking molecular data and real time. – an event known to separate species – the first appearance of a species in fossil record Unit 6: Classification and Diversity Mitochondrial DNA is used to study closely related species. • Mutation rate ten times faster than nuclear DNA • Passed down un-shuffled from mother to offspring grandparents mitochondrial DNA nuclear DNA parents Mitochondrial DNA is passed down only from the mother of each generation,so it is not subject to recombination. child Nuclear DNA is inherited from both parents, making it more difficult to trace back through generations. Unit 6: Classification and Diversity Phylogenetic Reconstruction Cladistics reconstructs phylogenies based on shared characters. Scientists consider two main types of characters when doing cladistic analysis. An ancestral character is found within the entire line of descent of a group of organisms. Derived characters are present members of one group of the line but not in the common ancestor. Unit 6: Classification and Diversity Cladograms The greater the number of derived characters shared by groups, the more recently the groups share a common ancestor. Unit 6: Classification and Diversity Grouping Species The broadest category in the classification used by most biologists is the domain. The most widely used biological classification system has six kingdoms and three domains. The three domains are Bacteria, Archaea, and Eukarya. The six kingdoms are Bacteria, Archaea, Protists, Fungi, Plantae, and Animalia. Unit 6: Classification and Diversity Unit 6: Classification and Diversity Domain Bacteria Eubacteria are prokaryotes whose cell walls contain peptidoglycan. Eubacteria are a diverse group that can survive in many different environments. Domain Archaea Archaea are thought to be more ancient than bacteria and yet more closely related to our eukaryote ancestors. Archaea are diverse in shape and nutrition requirements. They are called extremophiles because they can live in extreme environments. Unit 6: Classification and Diversity Domain Eukarya All eukaryotes are classified in Domain Eukarya. Domain Eukarya contains Kingdom Protista, Kingdom Fungi, Kingdom Plantae, and Kingdom Animalia. Unit 6: Classification and Diversity Kingdom Protista Protists are a diverse group of eukaryotic organisms that can be unicellular, colonial, or multicellular. Tend to be hard to classify. Protists are classified into three different groups— plantlike, animallike, and funguslike. Unit 6: Classification and Diversity Kingdom Fungi A fungus is a unicellular or multicellular eukaryote that absorbs nutrients from organic materials in the environment. Members of the kingdom, fungi have cell walls made up of chitin, are heterotrophic and tend to lack motility. Unit 6: Classification and Diversity Kingdom Plantae Members of Kingdom Plantae form the base of all terrestrial habitats. Plants are multicellular autotrophs that have cell walls composed of cellulose. Unit 6: Classification and Diversity Kingdom Animalia All animals are heterotrophic, multicellular eukaryotes. Animal organs often are organized into complex organ systems. Unit 6: Classification and Diversity Viruses—An Exception A virus is a nucleic acid surrounded by a protein coat. Viruses do not possess cells, nor are they cells, and are not considered to be living. Because they are nonliving, they usually are not placed in the biological classification system.