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LITERATURE REVIEW Review on molecular mechanisms and antibiotic resistance in Pathogens Introduction Urinary tract infection is one of the important causes of morbidity and mortality affecting all age groups across the life span. Anatomically, urinary tract is divided into an upper portion composed of kidneys, renal pelvis, and ureters and a lower portion made up of urinary bladder and urethra. UTI may involve only the lower urinary tract or both the upper and lower tract. Biofilms of the Gram-negative bacterium Pseudomonas aeruginosa are one of the major causes of complicated urinary tract infections with detrimental outcome. To develop novel therapeutic strategies the molecular adaption strategies of P.aeruginosa biofilms to the conditions of the urinary tract were investigated thoroughly. Molecular mechanisms and antibiotic resistance UTI are the second most common pathogenic infections, it is known to affect approximately 150 million people each year (Gonzalez et al, 1999). UTI may present at all ages of men and women, Fungal and bacterial infections are common in male and female, but the risk of UTI is much high in female because they have shorter urethra than men (Bethesda et al, 2005). E-coli is responsible for 80% of community acquired UTI and 40% health care associated UTI. Other main uropathogens include Candida spp, Proteus mirabilis, Staphylococcus and Klebsiella spp (Goering et al, 2008) etc. In most cases if bacterial infection is not treated they travel to the urethra and multiply causing kidney infection and lead to many health problems.One of the major bacterial infections seen in humans is genitourinary tuberculosis and nearly one third of world’s population is estimated to be infected with Mycobacterium tuberculosis.(mete et al , 2005). Urinary tract infections by P. aeruginosa are usually hospital-acquired and often iatrogenic (Garibaldi 1993).They may be related to urinary tract catheterization (Marrie et al 1978) instrumentation or surgery, including renal transplantation (Moor 1966) P. aeruginosa is the third most common nosocomial urinarytract pathogen after Escherichia coli and Enterococci,and is responsible for almost 11% of all hospital-acquired urinary infections. P. aeruginosa usually affects the urinary tract through ascending infection and adheres strongly to bladder uro-epithelium (Daifuku and, Stamm 1986). Production of b-lactamase by pathogens causing urinary tract infection (UTI) has been demonstrated to increase resistance to antimicrobial agents. (Shahidul et al ,2013). UTI is one of the most common bacterial infections in women, and one in four of these women will develop a recurrence. Various risk factors include sexual intercourse, use of contraception, antimicrobials, oestrogen, genetics, and the distance of the urethra from the anus are responsible for UTI in womens. (Anna Virginia 2005). Urinary tract infections (UTIs) are common post-renal transplant complications. During the first month post-transplantation, bacterial septicemia due to UTIs is an important cause of morbidity and mortality. (Abdulmalik 2013). The increase in antibiotic resistance among uropathogens is a global problem, uropathogens can change their physiologic features to induce resistance to antibiotic drugs (Ronald et al, 2003). Chronic infections caused by P. aeruginosa are mainly related to resistance to antimicrobials and the production of certain virulence factors. Molecular analysis showed that some of the genes required for biofilm formation and antimicrobial activity. Quorum sensing is a bacterial intercellular communication mechanism for controlling gene expression in response to population density (de Kievit, T. R., and B. H. Iglewski. 2000). Through quorum sensing, bacteria respond to their population density and regulate gene expression and cellular differentiation to optimize their physiology for a particular environmental stimulus. (Shapiro,J.A, 1998). The genes ppyR, pslA, pelA (biofilm formation), algD, algU, algL (alginate production), fliC (flagella) and exoA (exotoxin A) are responsible for bacterial virulence (Abdolamir Ghadaksaza et al, 2014). Biofilm formation appears to be a widespread attribute of bacteria and may allow increased survival ability under stressful conditions such as low nutrients or antimicrobial activity (Mah& O’tool, 2001). Biofilm is composed of water, exopolysaccharide, DNA, RNA, proteins and ions (Whitchurch et al.,2002) A typical high-affinity iron uptake system consists of a low-molecular-mass Fe (III)chelating compound, known as a siderophore, combined with its cognate membrane-located receptor. Such iron acquisition systems are generally regarded as important virulence or fitness factors.(Martinez et al, 1990). The luxS gene is highly conserved among many species of gram-negative and grampositive bacteria and is thought to be responsible for synthesizing a universally recognized cell signal referred to as autoinducer-2 (AI-2) (Surette et al 1998). lasI of Pseudomonas aeruginosa directs the synthesis of an acyl-homoserine lactone signal molecule used for P. aeruginosa intraspecies quorum signaling . Mutants in this gene were unable to produce biofilms that progressed beyond the very early stages of biofilm development (Davis et al. 1998) P. aeruginosa have ability to acquire resistance, via mutations, to all antibiotics. This problem seems likely to grow with the emergence of integrins that carry gene cassettes encoding both carbapenemases and amikacin acetyltransferases(David et al, 2002) The activity of PA-Fur on the promoters of iron-regulated genes involved in the production of two siderophores, pyochelin and pyoverdin, and in the expression of exotoxin A. The promoter region of the gene encoding exotoxin A (toxA) nor the promoters of the regAB operon, required for toxA expression.These data indicate that iron regulation of exotoxin A production involves additional factors which may ultimately be under the control of PA-Fur. (Ochsner et al, 1995).However, reduced formation of the extracellular polysaccharide alginate, typical for P. aeruginosa biofilms in lungs, indicated a different biofilm type for urinary tract infections. The obtained quorum sensing response results in an increased production of virulence factors like the extracellular lipase LipA and protease LasB and AprA explaining the harmful cause of these infections. (Petra et al 2013) The biofilm dispersal activity of D-Amino Acids may represent an effective strategy, in combination with antimicrobials, to release bacteria from biofilms, subsequently enhancing antimicrobial activity (Carlos et al., 2014). The expression of pfl and ldh associated with the adaptive mechanism of pathogens which would have contributed mainly to the formation of biofilm(Manasa 2014). Conclusion Urinary tract infections (UTIs) are the second most common infections in both hospitalized and community patients at all ages. The increasing multi-drug resistance reported in clinical isolates has become a major concern in the public health area given that the lack of effective treatment options for these infections, with the existing antibiotics, is becoming a problem. By this study we can understand the changes in the characteristics of bacteria associated with urinary tract infection that will help to introduce new treatment method and help to make changes in drugs to control the urinary tract infections. Widespread use of antimicrobial agents often leads to the selection of multi-drug resistant micro-organisms. Acquired or emerging bacterial resistance to one or several antimicrobial agents is a global problem (Gold SG and Moellering RC 1996). Many micro-organisms have become resistant to antimicrobial agents (Kunin ,1993). The main mechanisms of antibiotic resistance are: mutations in target genes (such as DNA gyrase and topoisomerase IV); over-expression of efflux pumps; changes in the cell envelope; down regulation of membrane porins, and modified lipopolysaccharide component of the outer cell membrane (in the case of Gram-negative bacteria). Biofilm formation is responsible for the antibiotic resistance in many organisms. Understanding the properties of biofilm will help to prevent UTI at its level. As the pattern of bacterial resistance is constantly changing, monitoring of antimicrobial susceptibilities is important. It provides information on the pathogenic organisms isolated from patients, and assists in choosing the most appropriate antimicrobial therapy. REFERENCE 1. 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