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Bacterial Classification • DOMAINS: • Bacteria • Archaea • KINGDOM: • Monera (in five-kingdom system) We will focus our initial attempts at classification on Bergey’s Manual of DETERMINATIVE Bacteriology • It uses the following characteristics in attempting to classify bacteria: • Gram stain reaction (cell wall type) • Cellular morphology (rod, coccus, etc.) • Oxygen requirements (obligate anaerobe, etc.) • Nutritional patterns (chemoautotrophs, etc.) • Remember, the SYSTEMATIC Manual is attempting to base this entire scheme on phylogeny. Four Divisions (same as Phyla) • Gram-negative • Gram-positive • Mycoplasmas - have no cell wall! • Archaebacteria - have strange cell walls w/no peptidoglycan. DIVISION I: GRAM NEGATIVE BACTERIA • The Cyanobacteria: aerobic photosynthesizers – primary producers in aquatic ecosystems Representative genus: Oscillatoria Gram Negative cont’d - spirals – The Spirochetes: • spiral in shape, possess axial filament Representative genera: – Treponema - causes syphilis – Borrelia - causes Lyme Disease – Other “spiral” bacteria • Helicobacter - causes stomach ulcers – microaerophilic, spiral shaped, motile flagellum • Vibrio - causes cholera – facultatively anaerobic, “curved”, motile flagellum Gram Negative cont’d - Enterics – The Enteric Bacteria: • facultatively anaerobic rods, often inhabit colon Representative genera: – Escherichia (coli) - large part of the normal microbiota, can cause food poisoning, used in research – Salmonella - causes food poisoning and typhoid fever – Shigella - causes dysentery – Klebsiella - member of normal microbiota in colon, may cause bacterial pneumonia – Serratia - may cause nosocomial infections – Yersinia - causes Plague (Black Death) Gram Negative cont’d • Chlamydias and Rickettsias: (Obligate Parasites) Chlamydia - causes a common sexually transmitted disease (STD) Rickettsia - causes Rocky Mountain Spotted Fever • Chemoautotrophs: – usually oxidize reduced Sulfur, Iron, and Nitrogen Compounds, live in muddy sediments, Thiobacillus - various species can oxidize reduced sulfur or iron compounds Gram Negative cont’d – Aerobic Rods and Cocci – Pseudomonas ubiquitous, lives in soil and water, may cause food spoilage, opportunistic infections – Neisseria causes gonorrhea, it is a diplococcus – Bordetella causes Whooping Cough – Rhizobium fixes atmospheric Nitrogen for plants DIVISION II: GRAM POSITIVE BACTERIA • Cocci – Staphylococcus: • Cocci arranged in grapelike clusters • May cause food poisoning, wound infections, boils, toxic shock syndrome – Streptococcus: • Cocci arranged linear chains May cause sore throat and Scarlet Fever Gram positive cont’d Rods – Endospore-forming rods Representative genera: – Bacillus - causes anthrax – Clostridium - causes botulism and tetanus – Acid-fast, non-spore forming rods Representative genus: – Mycobacterium - causes tuberculosis and leprosy Gram positive cont’d • The Actinomycetes: – filamentous (looks like fungal type growth), most live in soil Representative genus: Streptomyces produces many antibiotics including streptomycin. DIVISION III: The Mycoplasmas BACTERIA LACKING A CELL WALL Representative genus: Mycoplasma - may cause bacterial pneumonia DIVISION IV: THE ARCHAEBACTERIA • Have unusual cell walls, no peptidoglycan – Extreme Halophiles: “salt-lovers” • Halobacterium - photosynthesizes using bacteriorhodopsin, requires high salt concentrations – Extreme Thermophiles: “ heat-lovers” • Sulfolobus, Thermococcus - thrive at temperatures from 70oC to over 100oC, live in deep sea vents, volcanoes, hot springs – Thermoacidophiles: “heat and acid lovers” • Thermoplasma - thrives at pH ~ 2, 60 degrees C – Methanogens: “CH4 producers” • Methanobacterium - turn organic wastes, carbon dioxide, and hydrogen gas into methane; used in sewage treatment plants