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Anchors and Linkers for Solid-Phase Synthesis General, Examples for Functional Groups Carolin Pauker Definitions Spacer Located between resin carrier and linker Reduces steric hinderance Modifies for example hydrophilicity and hydrophobicity Remains after cleavage at the resin carrier Linker Bifunctional molecule one hand binds irreverible to resin, other hand binds reversible to desired molecule Remains after cleavage at the resin Anchor Resin-immobilized functional group forming a cleavable coupling Linker becomes anchor after immobilizing Direct syntheses on resin Conditions for Linkers Remaining stable during removal of Nterminal-protecting group and the whole syntheses  Removable under mild conditions without damaging the final product  Resin with different anchor structures requires orthogonal cleavage conditions > multiple products  Difficulties Very large number (over 400 linkers)  Many trival names (IUPAC nomenclature is complicated and inconvenient)  Difficult to find appropriate anchor for specific reaction conditions  Very large number of different applications  Cleavage Methods Acid  Base or nucleophilic  Hydrogenolysis  Enzymatic  Palladium catalysed  Photochemical  Oxidative or reductive  Depending on desired functional group in the product Acid-labile Anchors  Mostly involved in peptide and combinatorial chemistry  Cleavage reagents: HF, HBr, TFA and others  High number of products possible  Electropositive substituents (methoxy, amino or hydroxy groups) raise the stability formed cations > usage of weaker acid Examples for Acid Labile Anchors Anchors Cleaved by Nucleophiles  Based on β-elimination, hydrolysis, re-esterfication or aminolysis  Cleavage reagents NaOH Amine/NH3 Hydrazine Alcohol Product Carboxylic Acid Carboxamine Hydrazide Carboxylic acid ester Examples for Linkers Cleaved by Base or Nucleophiles Reduktive Cleavage   Orthogonal to many other methods Example: Desulfurization by using Raney Ni/H2 Oxidative Cleavage   Different approaches like ozonolysis of alkene Not compatible with groups modified by oxidizing agents Other Likers Photolabile linkers  Traceless linkers  Safty catch linkers  Multifunctional anchors (various endgroups can be generated by the use of different cleavage strategies)  Literature  Jung G. (ed.): Combinatorial Chemistry, Synthesis, Analysis, Screening, Wiley-VCH, Weinheim, 1999  Jung G. (ed.): Combinatorial Peptide and non Peptide Libraries, A Handbook, Wiley-VCH, Weinheim, 1996  Guillier, Orain, Bradley : Linkers and Cleavage Strategies in Solid Phase Organic Synthesis and Combinatorial Chemistry. Chem. Rev. 2000, 100, 2091-2157  Handout: Combinatorial Chemistry and Synthesis on Solid Support, B. König, SS 2006 Thank you for attention