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180 CHAPTER 6 F EVOLUTION OF FLOWERING PLANTS REFERENCES FOR FURTHER STUDY 7 Andrews, H. N. 1961. Studies in Paleobotany. Wiley, New York. APG ifi. 2009. An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III. Botanical Journal of the Linnean Society 161: 105—121. Crane, P. R., E. M. Friis, and K. Pedersen. 1995. The origin and early diversification of angiosperms. Nature 374: 27. Crepet, W. L. 1998. The abominable mystery. Science 282: 1653—1654. Cronquist, A. 1981. An integrated system of classification of flowering plants. Columbia University Press, New York. Davies, T. J., T. G. Barraclough, M. W. Chase, P. 5. Soltis, D. E. Soltis, and V. Savolainen. 2004. Darwin’s abominable mystery: Insights from a supertree of the angiosperms. Proceedings of the National Academy of Sciences of the United States of America 101: 1904—1909. Doyle, J. A. 2006. Seed ferns and the origin of angiosperms. Journal of the Torrey Botani cal Society 133: 169—209. Doyle, J. A. 2008. Integrating molecular phylogenetic and paleobotanical evidence on origin of the flower. International Journal of Sciences 169: 816—843. Plant Eames, A. J. 1961. Morphology of the angios perms. McGraw Hill, New York. Friedman, W. E., and J. H. Williams. 2004. Developmental evolution of the sexual proces s in ancient flowering plant lineages. The Plant 16, S119—S 132, Supplement. Cell Friedman, W. E., and K. C. Ryerson. 2009. Reconstructing the ancestral female gametophyte of angiosperms: insights from Amborella and other ancient lineages of flowering plants. Ameri can Journal of Botany 96: 129—143. Friis, E. M., J. A. Doyle, P. K. Endress, and Q. Leng. 2003. Archaefructus: Angiosperm precursor or specialized Plant Science 8: 369—373. early angiosperm? Trends in Friis, E. M., K. R. Pedersen, and P. R. Crane. 2000. Reproductive structure and organization of basal angiosperms from the Early Cretaceous (Barremian or Aptian) of western Portugal. International Journal of Plant Sciences 161: S 169—S 182. Goethe, J. W. 1790. Versuch die Metamorphos e der Pflanzen zu erkllien. Ettinger, Gotha, Germany. Gould, R. E., and T. Delevoryas. 1977. The biology of Glossopteris: Evidence from petrifie d seed-bearing and pollen-bearing organs. inga 1: 387—399. Alcher Jack, T. 2001. Relearning our ABCs: New twists on an old model. Trends in Plant Scienc e 6: 310—316. Jenik, P. D., and V. F. Irish. 2000. Regulation of cell proliferation patterns by homeotic genes during Arabidopsis floral development. Deve opment 127: 1267—1276. l Retallack, G., and D. L. Dilcher. 1981. Argum ents for a glossopterid ancestry of angios perms. Paleobiology 7: 54—67. Soltis, D. E., P. S. Soltis, P. K. Endress, and M. W. Chase. 2005. Angiosperm phylogeny and evolution. Sinauer, Sunderland, MA. Stebbins, G. L. 1974. Flowering Plants: Evolut ion Above the Species Level. Belknap Press of Harvard University Press, Cambridge, Sun, G., D. L. Dilcher, S. Zheng, and Z. MA. Zhou. 1998. In search of the first flower: A Jurassic angiosperm, Archaefructus, from China. Science 282: 1692—1695, Northeast Sun, G., Q. Ji, D. L. Dilcher, S. Zheng, K. C. Nixon, and X. Wang. 2002. Archaefructaceae, a new basal angiosperm family. Science 296: 899— Stewart, W. N., and G. W. Rothwell. 1993. 904. Paleobotany and the evolution of plants. Cambr idge Univesity Press, New York. Takhtajan, A. L. 1991. Evolutionary Trends in Flowering Plants. Columbia University Press, New York. Thomas, H. H. 1925. The Caytoniales, a new group of angiospermous plants from the Jurassi c rocks of Yorkshire. Philosophical Transactions the Royal Society of London 213: 299—363. of Vejt, B., P.. J. Schmidt, S. Hake, and M. F Yanofsky. 1993. Maize floral development: new genes and old mutants. The Plant Cell 5: Zaiiis, M. J., P. S. Soltis, Y. L. Qiu, E. 1205—1215. Zimmer, and D. E. Soltis. 2003. Phylogenetic analyses and perianth evolution in basal angios Annals of the Missouri Botanical Garden perms. 90: 129—150. DIVERSITY AND CLASSIFICATION OF FLOWERING PLANTS: AMBORELLALE S, NYMPHAEALE S, AUSTROBAILEYALES, MAGNOLIIDS, CERATOPHYLLALES, AND MONOCOTS INTRODUCTION ]ORANG1OSPE CDES 182 MONOCOLEDONS 200 182 MonocotApomohieS 200 FAMILY DESCRIPTIONS 184 Classification of the Monoco1ed0flS 202 ...... 185 ACOLES 203 186 Acoraceae 203 187 ALISMATALES 205 187 s.aceae 205 187 Alismataceae 208 PETROSALVIALES 210 187 DIOSCOREALES 210 MAGNOLIIDS 189 Dioscoreaceae 210 LAUPALES 190 Lauraceae 190 187 MAGNOLIALES 192 Annonaceae Magnoliaceae 192 192 PIPERALES Aristolochiaceae Piperaceae Saururaceae CERATOPHYLLALES Ceratophyllaceae PANDANALES 210 Pandanaceae 210 LILIALES Liliaceae 213 213 ASPARAGALES 213 Agavaceae Alliaceae Amaryllidaceae Asphodelaceae Iridaceae Orchidaceae Themidaceae 218 220 220 221 224 224 229 192 192 197 197 197 197 (Continued) © 2010 Elsevier Inc. All right.s reserved. doi: 10, 1016/B970.012.37438O0.OOOOS 1 181 182 CHAPTER 7 COMMELINIDS . 230 DASYPOGONACEAE 231 ARECALES 231 Arecaceae (Palmae) COMMELINALES, ZINGIBERALES, AND POALES 231 232 POALES Angiospermae 249 Bromeliaceae Cyperaceae Eriocaulaceae Juncaceae Poaceae (Gramineae) Restionaceae Sparganiaceae Typhaceae Xyridaceae 250 250 254 254 255 258 262 262 262 COMMELINALES 232 Commelinaceae Haemodoraceae Pontederiaceae 235 235 238 ZINGIBERALES 241 REVIEW O.LJESTIONS 265 Musaceae Strelitziaceae Zingiberaceae Cannaceae 241 242 245 245 EXERCISES 266 REFERENCES FOR FURTHER STUDY 266 WEB SITES 274 r MagnoliidS — — c’ c. — — MagnoliophYta rj I Eudicots T .— I — — — — — rj ‘ — -.. C’, S 0 — 183 EVOLUTiON AND DIVERSITY OF PLANTS UNIT 11 DIVERSITY AND CLASSIFICATION OF FLOWERING PLANTS 0 :° — .— cotyledon one leaf venation parallel INTRODUCTION The phylogenetic relationships within the angiosperms has been and continues to be a field of active research in plant systematics. Much progress has been made with the use of cladistic method ology and the incorporation of morphological, anatomical, embryological, palynological, karyological, chemical, and molecular data (see Chapters 9—14). The more recent use of mul tiple gene sequence data has been particularly useful in assessing higher-level angiosperm relationships. However, the phyloge netic relationships and classification presented in this chapter can be viewed as somewhat preliminary, to be further refined with continued research. For a more precise understanding of relationships within a particular group, there is no substitute for consulting the most recent, primary scientific literature. MAJORANGIOSPERM CL4DES Portrayal of the relationships of major angiosperm groups is modeled (with very few exceptions) after the system of the Angiosperm Phylogeny Group, 2009 (referred to as “APG III 2009”), which supersedes APG 1998 and APG II 2003. The APG III system is based on published cladistic analyses pri marily utilizing molecular data (e.g., Chase et al. 1993, 2000; Graham and Olmstead 2000b; Soltis et al. 1997, 2000, 2007; Qiu et al. 2000; Zanis et al. 2002) or a combination of mor phological and molecular data (e.g., Nandi et al. 1998). In the APG III system, an attempt was made to recognize only those angiosperm families that are monophyletic. In many cases, angiosperm families have been redefined from their past, tra ditional circumscription, either being split into separate groups (e.g., the traditional “Liliaceae” and “Scrophulariaceae”) or united into one family (e.g., the Bombacaceae, Malvaceae, Sterculiaceae, and Tiliaceae united into one family, Malvaceae s.l.). The APG III system classifies one to several families into orders (thus, each group having the ending “-ales”), where strong evidence suggests that the order is monophyletic. It must be understood, however, that the designated orders are not comparable evolutionary units and are not indicative of a hierarchical classification system (see Chapter 2). For exam ple, a single “order” may be sister to a monophyletic group containing several orders. The orders can be viewed simply as convenient placeholders for one or more families that appear to comprise a monophyletic group with relatively high cer tainty. Some monophyletic groups containing several orders are given names, such as Magnoliids, Monocotyledons (monocots), Commelinids, Eudicotyledons (eudicots), Rosids, Fabids, Malvids, Asterids, Lamiids, and Campanulids. The precise interrelationships of the major groups of angio sperms still show some uncertainty, but recent results have begun to converge. Figure 7.1 illustrates higher-level phylo genetic relationships from various analyses that are summa rized in APG III and modified from Soltis et al. (2007). Note that some polytomies occur; further research may, in time, resolve many of these. In particular, the elucidation of the most basal branches of the flowering plants may yield insight into early angiosperm evolution and radiation. As seen in Figure 7.1, the angiosperms can be broadly delimited into several groups: the Amborellales, Nymphaeales, Austrobaileyales, Chioranthales, Magnoliids (consisting of Laurales, Magnoliales, Canellales, and Piperales), monocotyledons (the Monocotyledoneae or monocots), Ceratophyl lales, and the eudicots. Of these major groups, the current chapter deals with all but the eudicots, which are covered in Chapter 8. The Amborellales, Nymphaeales, and Austrobai leyales are sometimes referred to as “basal” flowering plants (or the “ANITA” grade) because they include the first clades that diverged from the common ancestor of the angiosperms. However, as portrayed in Figure 7.1, it is evident that “basal” vasculature atactostelic, vascular cambium absent sieve tube plastids pollen tncolpate or tricolpate-derived proteiflaceoUS/Cuneate vessels (secondarily lost in some taxa) FIGURE 7.1 ifi (2009) and Soltis et al. (2007), with selected apomor Phylogenetic relationships of major angiosperm clades, after APG phies (see Chapter 6). I angiospermS are a paraphyletic assemblage, not to be recog nized as a formal taxon. The families within the orders are listed in Table 7.1 (all except the monocots), Tables 7.2 (“basal” monocots) and 7.3 (commeliflid monocots); eudicot families are listed in Tables 8.1—8.3 of Chapter 8. The great bulk of the angiospermS in terms of species diver sity are contained within the monocots and eudicots. The monocotyledons are a large group, containing approximatelY 22% of all angiosperms (see later discussion). The eudicots comprise a very large group, including approximately 75% of all angio sperms, arid will be treated separately in Chapter 8. The traditionally defined group “DicotyledOfleae,” the dicotyledons or dicots, have been defined in the past by their possession of embryos with two cotyledons. It is now thought feature that the possession of two cotyledons is an ancestral apomorphy for for the taxa of the flowering plants and not an delimited traditionally any group within. Thus, “dicots” as and (all angiospermS other than monocots), are paraphyletic must be abandoned as a formal taxonomic unit. In the descriptions in this chapter and in Chapter 8, exemplars are used for each order or other major group. context of The choice of these exemplars is very limited in the not the huge diversity of the angiospermS. These treatments are flower on references fine designed as a substitute for the many the end of ing plant family characteristics (see the references at of the this chapter), but are intended as an introduction to some common or important groups for the beginning student. Taxa at the traditional rank of family are utilized as pri described. mary units; in a few cases subfamilies or tribes are plant Only major, general features of commonly encountered families are presented, with examples cited to show diagnostic features. More thorough descriptions and illustrations of angio the sperm families may be obtained from references cited in family descriptions and listed at the end of the chapter. _ 182 CHAPTER 7 DIVERSITY AND CLASSIFICATION OF FLOWERING PLANTS COMMELINIDS DASYPOGONACEAE ARECALES Arecaceae (Palmae) COMMELINALES, ZINGIBERALES, AND POALES COMMELINALES Commelinaceae 1-Iaemodoraceae Pontederjaceae ZINGIBERALES Musaceae Streljtzjaceae Zingiberaceae Cannaceae 230 231 231 231 232 232 235 235 238 POALES Bromeljaceae Cyperaceae Enocaulaceae Juncaceae Poaceae (Gramineae) Restjonaceae Sparganiaceae Typhaceae Xyridaceae UNIT [I Angiospermae 249 250 250 254 254 255 258 262 262 262 183 EVOLUTION AND DIVERSITY OF PLANTS — Magnoliophyta Eudicots — o S — r — : • — Cl) rj) — - — .- — • d Magnoliids = — c, Cl, , — c’ Cl) Cl) —— — -.. 0 C 0 — — .— .. =C 0 : = .— .— ci) — — .‘ :lD-c 241 REVIEW QJESTIONS 241 242 245 245 EXERCISES INTRODUCTION The phylogenetic relationships within the angiosperms has been and continues to be a field of active research in plant systematics. Much progress has been made with the use of cladistic method ology and the incorporation of morphological, anatomical, embryologica], palynologicai, karyologicai, chemical, and molecular data (see Chapters 9—14). The more recent use of mul tiple gene sequence data has been particularly useful in assessing higher-level angiosperm relationships. However, the phyloge netic relationships and classification presented in this chapter can be viewed as somewhat preliminary, to be further refined with continued research. For a more precise understanding of relationships within a particular group, there is no substitute for consulting the most recent, primary scientific literature. MAJORANGIOSpEI CLADES Portrayal of the relationships of major angiosperm groups is modeled (with very few exceptions) after the system of the Angiosperm Phylogeny Group, 2009 (referred to as “APG III 2009”), which supersedes APG 1998 and APG II 2003. The APG ifi system is based on published cladistic analyses pri marily utilizing molecular data (e.g., Chase et al. 1993, 2000; Graham and Olmstead 2000b; Softis et al. 1997, 2000, 2007; Qiu et al. 2000; Zanis et al. 2002) or a combination of mor phological and molecular data (e.g., Nandi et al. 1998). In the APG III system, an attempt was made to recognize only those angiosperm families that are monophyletic In many cases, angiosperm families have been redefined from their past, tra ditionad circumscription either being split into separate groups (e.g., the traditional “Liliaceae” and “Scrophulariaceae”) or united into one family (e.g., the Bombacaceae, Malvaceae, Sterculiaceae, and Tiliaceae united into one family, Malvaceae REFERENCES FOR FURTHER STUDY WEB SITES 265 266 266 274 s.1.). The APG HI system classifies one to several families into orders (thus, each group having the ending “-ales”), where strong evidence suggests that the order is monophyletic. It must be understood, however, that the designated orders are not comparable evolutionary units and are not indicative of a hierarchical classification system (see Chapter 2). For exam ple, a single “order” may be sister to a monophyletic group containing several orders. The orders can be viewed simply as convenient placeholders for one or more families that appear to comprise a monophyletic group with relatively high cer tainty. Some monophyletic groups containing several orders are given names, such as Magnoliids, Monocotyledons (monocots), Commelinids, Eudicotyledons (eudicots), Rosids, Fabids, Malvids, Asterids, Lamiids, and Campanulids. The precise interrelationships of the major groups of angio sperms still show some uncertainty, but recent results have begun to converge. Figure 7.1 illustrates higher-level phylo genetic relationships from various analyses that are summa rized in APG III and modified from Soltis et al. (2007). Note that some polytomies occur; further research may, in time, resolve many of these. In particular, the elucidation of the most basal branches of the flowering plants may yield insight into early angiosperm evolution and radiation. As seen in Figure 7.1, the angiosperms can be broadly delimited into several groups: the Amborellales, Nymphaeales, Austrobaileyales, Chloranthales, Magnoliids (consisting of Laurales, Magnoliales, Canellales, and Piperales), monocotyledons (the Monocotyledoneac or monocots), Ceratophyl lales, and the eudicots. Of these major groups, the current chapter deals with all but the eudicots, which are covered in Chapter 8. The Amborellales, Nymphaeales, and Austrobaj leyales are sometimes referred to as “basal” flowering plants (or the “ANITA” grade) because they include the first clades that diverged from the common ancestor of the angiosperms. However, as portrayed in Figure 7.1, it is evident that “basal” pollen tricolpate or tricolpate-derived vessels (secondarily lost in some taxa) FIGURE 7.1 Phylogenetic relationships of major angiosperm clades, after APG ifi (2009) and Soltis et al. (2007), with selected apomor phies (see Chapter 6). angiosperms are a paraphyletic assemblage, not to be recog nized as a formal taxon. The families within the orders are listed in Table 7.1 (all except the monocots), Tables 7.2 (“basal” monocots) and 7.3 (comrnelinid monocots); eudicot families are listed in Tables 8.1—8.3 of Chapter 8. The great bulk of the angiosperms in terms of species diver sity are contained within the monocots and eudicots. The monocotyledons are a large group, containing approximately 22% of all angiosperms (see later discussion). The eudicots comprise a very large group, including approximately 75% of all angio sperms, and will be treated separately in Chapter 8. The traditionally defmed group “Dicotyledoneae,” the dicotyledons or dicots, have been defined in the past by their possession of embryos with two cotyledons. It is now thought that the possession of two cotyledons is an ancestral feature for the taxa of the flowering plants and not an apomorphy for any group within. Thus, “dicots” as traditionally delimited (all angiosperms other than monocots), are paraphyletic and must be abandoned as a formal taxonomic unit. In the descriptions in this chapter and in Chapter 8, exemplars are used for each order or other major group. The choice of these exemplars is very limited in the context of the huge diversity of the angiosperms. These treatments are not designed as a substitute for the many fine references on flower ing plant family characteristics (see the references at the end of this chapter), but are intended as an introduction to some of the common or important groups for the beginning student. Taxa at the traditional rank of family are utilized as pri mary units; in a few cases subfamilies or tribes are described. Only major, general features of commonly encountered plant families are presented, with examples cited to show diagnostic features. More thorough descriptions and illustrations of angio sperm families may be obtained from references cited in the family descriptions and listed at the end of the chapter.