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Chapter 6 Cellular Respiration: Obtaining Energy from Food Biology and Society: Marathoners versus Sprinters • It is unusual to find a runner who complete equally well in both 100m and 1000m races. • Natural differences in the muscles of these athletes favor sprinting or long-distance running. • The muscles that move our legs contain two main types of muscle fibers: Slow-twitch fibers & Fast-twitch fibers © Jong B. Lee, Ph.D. • Slow-twitch fibers (지근): function best in marathons Generate less power Last longer Generate ATP using oxygen • Fast-twitch fibers (속근): function best in sprints Generate more power Fatigue much more quickly Can generate ATP without using oxygen • All human muscles contain both types of fibers but in different ratios. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. ENERGY FLOW AND CHEMICAL CYCLING IN THE BIOSPHERE • Fuel molecules in food represent solar energy • Animals depend on plants to convert solar energy to chemical energy :This chemical energy is in the form of sugars and other organic molecules. 그 외 clothing, lumber, paper • Autotrophs (자가 영양 생물): called producers (생산자) – “Self-feeders”: organisms that make all their own organic matter from inorganic nutrients RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 1 • Heterotrophs (종속 영양 생물) – “Other-feeders” – Humans and other animals that cannot make organic molecules from inorganic ones – Depend on autotrophs for their organic fuel and material for growth and repair – Called consumers (소비자) RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. Chemical Cycling Between Photosynthesis and Cellular Respiration • The ingredients for photosynthesis are carbon dioxide and water – CO2 is obtained from the air by a plant’s leaves – H2O is obtained from the damp soil by a plant’s roots • Chloroplasts rearrange the atoms of these ingredients to produce sugars (glucose) and other organic molecules – Oxygen gas is a by-product of photosynthesis RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. • Both plants and animals perform cellular respiration – Cellular respiration is a chemical process that harvests energy from organic molecules – Cellular respiration occurs in mitochondria – Cellular respiration uses to convert energy extracted from organic fuel to another form of chemical energy called ATP, an energy currency in the cell • The waste products of cellular respiration, CO2 and H2O, are used in photosynthesis RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 2 CELLULAR RESPIRATION: AEROBIC HARVEST OF FOOD ENERGY • Cellular respiration – A living version of internal combustion – The main way that chemical energy is harvested from food and converted to ATP – This is an aerobic process—it requires oxygen – 유기 연료에서 추출한 에너지 → 화학에너지인 ATP 에너지로 전환하기 위해, O2를 필요로 한다. The Relationship Between Cellular Respiration and Breathing Cellular respiration and breathing are closely related – Cellular respiration requires a cell to exchange gases with its surroundings – Breathing exchanges these gases between the blood and outside air RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. The Overall Equation for Cellular Respiration The Role of Oxygen in Cellular Respiration • A common fuel molecule for cellular respiration is glucose During cellular respiration, hydrogen and its bonding electrons change partners – This is the overall equation for what happens to glucose during cellular respiration H+ + e- Glucose – The series of arrows indicates that cellular respiration consists of many chemical steps – The process can produce up to 38 ATP molecules for each glucose consumed RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee Oxygen Carbon dioxide Water Energy Hydrogen and its electrons go from sugar to oxygen, forming water (That hydrogen transfer turns out to be the key to why oxygen is so vital to the harvest of energy during cellular respiration) RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 3 Redox Reactions • Chemical reactions that transfer electrons from one substance to another are called oxidation-reduction reactions (산화 환원 반응) : Redox reactions for short • The loss of electrons (and hydrogens) during a redox reaction is called oxidation • The acceptance of electrons (and hydrogens) during a redox reaction is called reduction RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. • Energy is released when hydrogen and its bonding electrons change partners, from sugar to oxygen. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. A very rapid electron fall Why does electron transfer to oxygen release energy? – In redox reactions, oxygen is an “electron grabber”. – When electrons move from glucose to oxygen, it is as though they were falling. – Instead of gravity, it is the attraction of electrons to oxygen that causes the “fall” and energy release during cellular respiration – This “fall” of electrons releases energy during cellular respiration RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee • A very rapid electron fall generates an explosive release of energy in the form of heat and light. ex) A reaction between hydrogen gas and oxygen gas • The flame represents energy released as heat and light RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 4 NADH and Electron Transport Chains The first stop is an electron acceptor called NAD+ Cellular respiration is a more controlled “fall” of electrons: • The transfer of electrons from organic fuel to NAD+ (nicotinamide adenine dinucleotide) reduces it to NADH Instead of liberating food energy in a burst of flame, cellular respiration unlocks chemical energy in smaller amounts that cells can put to productive use • The rest of the path consists of The path that electrons take on their way down from glucose to oxygen involves many steps. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. The Metabolic Pathway of Cellular Respiration • Cellular respiration is an example of a metabolic pathway: a series of chemical reactions in cells • A specific enzyme catalyzes each reaction in a metabolic pathway • All of the reactions involved in cellular respiration can be grouped into three main stages an electron transport chain : This chain involves a series of Redox reactions • This electron transport chain lead ultimately to the production of large amounts of ATP RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. A Road Map for Cellular Respiration Cytosol Mitochondrion High-energy electrons carried mainly by NADH High-energy electrons carried by NADH Glycolysis Glucose 2 Pyruvic acid Krebs Cycle Electron Transport 1. Glycolysis (해당과정) in cytoplasm 2. The Krebs cycle in mitochondria matrix 3. Electron transport in mitochondria inner membrane RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 5 Stage 1: Glycolysis (해당과정) • A molecule of glucose is split into two molecules of pyruvic acid in cytosol (but not mitochondria) cf) pyruvic acid (피브루산) formula: CH3-C-COOH • Meanings of this metabolism (생화학적인 의미) - These molecules then donate high energy electrons to NAD+, forming NADH (Generate two NADH molecules per glucose) - Generate two ATP molecules: by substrate-level of phosphorylation (기질수준의 인산화 과정에 의해서) RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. Substrate level of phosphorylation Glycolysis makes some ATP directly when enzymes transfer phosphate groups from fuel molecules to ADP (substrate level of phosphorylation , 기질수준 의 인산화 ) Enzyme RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. Stage 2: The Krebs Cycle (= The citric acid cycle) • The Krebs cycle completes the breakdown of sugar This cycle completes the breakdown of sugar produce CO2 • Generate three NADH and one FADH2 (function as electron donor for electron transfer system) • Generate two ATP molecules (by substrate level of phosphorylation) 이 과정에 참여하는 효소들은 mitochondria 내부의 액체에 존재한다. 즉, mitochondria matrix에서 수행됨. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 6 Krebs cycle • In the citric acid cycle, pyruvic acid from glycolysis is first “prepped” into a usable form, Acetyl CoA. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. Stage 3: Electron Transport • Electron transport (전자전달) releases the energy your cells need to make the most of their ATP • The molecules of electron transport chains are built into the inner membranes of mitochondria (electron transport chain을 구성하는 단백질과 그 밖에 분자들은 mitochondria의 내막에 존재) RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 7 • The entire electron transport chain functions as a chemical machine that uses energy released by the “fall” of electrons to pump hydrogen ions across the inner mitochondrial membrane • The energy stored by electron transport behaves something like the electron reservoir of water behind a dam • The membrane, analogous to the dam, temporarily restrains the H+ ions. • By pumping H+ ions, electron transport chains store potential energy by making the ions more concentrated on one side of the membrane than on the other (these H+ ions store potential energy) RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. • There is a tendency for the H+ ions to gush back to where they are less concentrated, just as there is a tendency for water to flow downhill. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. • When the hydrogen ions flow back through the membrane, they release energy Space between membranes H H Electron carrier H H H H H H H H H Protein complex – The ions flow through ATP synthase. This action spin a component of the ATP synthase and activate catalytic action. ATP synthase takes the energy from this flow and synthesizes ATP H H Inner mitochondrial membrane FADH2 Electron flow Matrix H 1 2 NADH H FAD – ATP synthase는 ADP 분자에 Phosphate-group을 부착시켜 ATP를 재 발생시킨다. NAD H O2 2 H H2O ADP P H Electron transport chain RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee H ATP H ATP synthase – Some of deadliest poisons (CO and HCN) do their damage by disrupting electron transport (blocking the transfer of electrons to oxygen RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 8 The Versatility of Cellular Respiration • Cellular respiration (versatile metabolic furnace) can “burn” other kinds of molecules besides glucose – Diverse types of carbohydrates – Fats – Proteins RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. Adding Up the ATP from Cellular Respiration ATP 생성 상황 A summary of ATP yield during cellular respiration Glucose 2 pyruvic acid + 2 ATP + 2 NADH 2 pyruvic acid 6 CO2 + 6 H2O + 2 ATP + 8 NADH + 2 FADH2 10 NADH x 3 ATP/NADH = 30 ATP 2 FADH2 x 2 ATP/FADH2 = 4 ATP 4 ATP + 30 ATP + 4 ATP = 38 ATP RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 9 FERMENTATION: ANAEROBIC HARVEST OF FOOD ENERGY • Some of your cells can actually work for short periods without oxygen – For example, muscle cells can produce ATP under anaerobic conditions • Fermentation (발효): The anaerobic harvest of food energy Fermentation in Human Muscle Cells • Human muscle cells can make ATP with and without oxygen – If you start to run because you’re late for class your muscle forced to work under anaerobic conditions. – They have enough ATP to support activities such as quick sprinting for about 5 seconds – A secondary supply of energy (creatine phosphate) can keep muscle cells going for another 10 seconds – To keep running, your muscles must generate ATP by the anaerobic process of fermentation RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. • Glycolysis is the metabolic pathway that provides ATP during fermentation – To harvest food energy during glycolysis, NAD+ (not NADH) must be present as an electron acceptor – This is no problem under aerobic condition, because the cell regenerates its NAD+ when NADH drops its electron cargo down electron transport chains to O2 – However, this productive recycling of NAD+ cannot occur under anaerobic conditions because there is no O2 to accept the electron RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. – Instead, NADH disposes of (처분하다) electrons by adding them to pyruvic acid produced by glycolysis – 즉, 해결책: Pyruvic acid is reduced by NADH, producing NAD+, which keeps glycolysis going • Glycolysis produces just two ATPs – Is not efficient compared with 38 ATPs under the aerobic condition – Your cells have to consume more glucose fuel RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 10 • Lactic acid (젖산) as a by-product after fermentation in muscle cells – A temporary accumulation of lactic acid in muscle cells contributes to the soreness or burning you feel after exhausting run – The lactic acid eventually transported in the blood from muscles to the liver, where liver cells convert it back to pyruvic acid – Oxygen debt: O2 that metabolic pathway requires after you’ve stopped vigorous activity (you breathe hard even after stopping exercise). The extra oxygen is used to generate glucose from lactic acid (gluconeogenesis) RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. Fermentation in Microorganisms RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. Fermentation in Microorganisms • Yeast (효모), a microscopic fungus • Various types of microorganisms perform fermentation – Fermentation products: cheese, sour cream, yogurt (주로 젖산 때문에 이러한 맛이 발생) – Yeast cells are capable of both cellular respiration and fermentation but a slightly different type of fermentation – 그 밖에 soy source (soybean), pickle cucumbers, pepperoni, salami 등이 있다. – This pathway (=alcohol fermentation) produces CO2 and ethyl alcohol RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 11 • The food industry uses yeast to produce various food products RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. EVOLUTION CONNECTION: LIFE ON AN ANAEROBIC EARTH • 산소의 사용능력에 따라 생물체의 분류 - Facultative anaerobe: an organism that harvest food energy by either cellular respiration or fermentation - Obligate anaerobe: 산소 접촉 시 사망, 깊은 토양 속 미생물, 캔 속의 미생물, 늪지대에 사는 미생물 - Obligate aerobe: 산소를 절대적으로 필요로 하는 생명체 Ancient bacteria probably used glycolysis to make ATP long before oxygen was present in Earth’s atmosphere – Glycolysis is a metabolic heirloom from the earliest cells that continues to function today in the harvest of food energy – Krebs cycle & electron transport chain은 산소가 존재하는 aerobic condition에서만 작동하지만 glycolysis는 aerobic 과 anaerobic condition에서 모두 작동할 수 있다. 그러므로 아마도 고대의 bacteria들은 지구의 대기에 산소가 없을 때 glycolysis를 사용하여 ATP를 만들었을 것으로 추정한다. RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. RPTSE Biology – Fall 2015, Dr. Jong B. Lee RPTSE BIO Fall 2015 Jong B. Lee, PhD, All rights reserved. 12