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Transcript
Centre of Excellence hosts
international workshop
dtimpeall. Is maith an rud e gur féidir plé
Rinneamar cur sios agus plé ar gnáth
May 2010.qxd:Layout
1 copy development
Irish
biopharmaceutical
Rinneadh
agallamh
ar 07/05/2010
ceathrar againn 13:12
Pharma
recently
ócompany,
InstitúidSigmoid
Mhic Con
Mhí do
chlár scooped
nua
the overall Innovation of the Year award at
ar
RTE Raidio na Gaeltachta le deanaí.
the inaugural Irish Times All-Island
As a Europeanchlár
Centre ofseo
Excellence,
the
Rachaidh
darbh ainm
Innovationan
Awards. nua
The life-science
SME,
Department
of Rheumatology
ingraduate,
St Vincent’s
‘Ar
StraebysaUCD
tSaotharlann’
i ngleic
leis an
founded
pharmacology
Dr
Ivan
Coulter,
hasan
actively
collaborated
University
Hospital
was chosen
to Labhair
hostwith
an
eolaíocht
agus
timpeallacht.
Conway
Fellow,
Professor
Cormac
Sean
MacFhearraigh,
Sinead
Nic
An
international
two-day
workshop
onTaylor
March
since being granted a Science Foundation
Ultaigh,
Tiarnán
Ó
Máille
agus
mé
féin
26th
&
27th
2010.
Sponsored
by
Roche
Ireland industry research partnership
award
faoin
taighde
éagsúil atá
ar bun againn.
Pharma,
the Participate
workshop
gave
in
2004.
Labhraíomar
neart
réimsí
taighde
twenty
from
centres
in ó
The
Irishrheumatologists
Timesfaoi
award
recognises
the stellar
fiobrois
scámhoige
Alzheimer.
innovative
performance
ofgalar
Sigmoid
Pharma
Europe and
Australiago
the
opportunity
to in
their application of research and development.
witness the care of patients with rheumatoid
The company has developed two new drug
arthritis (RA) LEDDS™
at St Vincent’s.
technologies,
and SmPill™, which not
only enhance the solubility and permeability of
the drug but can deliver it to targeted locations
in the gastrointestinal tract, including the
colon.
Irish biopharmaceutical development
Pagein 3
results
both academic outputs and the
application
research
toward
lá agus naofrudaí
a bhíonn
arclinical
siúl saproduct
development with indigenous companies.”
tsaotharlann anseo san institúid don
The Participate
focused
ongoDr
Commenting
on programme
theMhiníomar
Taylor collaboration,
lucht
éisteachta.
dóibh
Coulter
said,
“The
collaboration
with
the
advanced
treatment
regimens
for
RAeolas
in Taylor
thea
ndéanamar
taighde
áirithe chun
laboratory
clearly practical
demonstrates
theofpotential
clinic,arincluding
aspects
biologic
fháil
na
galair
éagsúla
chun
coir
leighis
that
can be realised
focused infusion
out through
inna
thedaoine
accredited
atherapy
bhaintcarried
amach
bhionn
application
of basicdo
research.
Theadevelopment
suite
that
provides
optimal
care
forlike-minded
RA
agafulaingt
de bharr
nadepend
galair on
seo.
Tá anof
smart economy
will
patients.
In
addition
to
lectures
from
collaborative
partners
identifying
opportunities
chuid taighde tabhachtach ar siúl Conway
anseo
Fellows,
Professors
Oliver
FitzGerald
and
and
realising
basic
and
applied
research
san
institiúd
a d’fhéadfadh
tionchar
synergies.
This
collaboration,
initiated
through
Douglas Veale, delegates heard from clinical
mhor
a bheithsupplement,
aige ar shaol
daoinethe
inár
anurse
SFI research
highlights
specialists about patient
education,
potential
that
innovative
indigenous
companies
screening
and
monitoring
of biological
working with academia can realise.”
tract is lined with cells that block the contents
ofa the
gut from ar
leaking
into theseo
intestine.
In an
dhéanamh
an taighde
tri mhean
IBD patient, this barrier is broken and the
na Gaeilge le mhuintir na Gaeilge. Bígí ag
contents of the gut leak out into surrounding
Addressing
the
international
guests,
Mary
faire
amach
don
chlár
nua
‘IsConway
eolaíMsmise’
areas.
The
research
team in
UCD
used
Duff,
Director
of Nursing
and
Kayclass
Radio
inaMs.
dteannta
is of
aar
model
of na
IBDGaeltachta,
and,
by applying
a new
Connolly,
Assistant
Directorinhibitors,
of http://www.
Nursingwere
for the
drugs
known
as hydroxylase
féidir
é a fháil
ar podcast
ar
able
to &
almost
reverse
Bone
Joint completely
Unit expressed
theirthehope that
rte.ie/rnag/arstraesatsaotharlann.html
symptoms
of theof
disease.
the experience
the multidisciplinary team
from St
wouldnew
provide
template
“When
weVincent’s
applied these
drugsa to
our IBDfor
model,
the
gut
was tricked
into thinking
delegates
to reproduce
similar
care andthat it
Robert
Lumsden
was being deprived of oxygen. This activated
facilities for the management of RA patients in
protective pathways, which in turn prevented
their
respective
countries.
the death
of the cells
that line the
gastrointestinal tract,” explained Professor
Taylor. “Our pre-clinical trial data can now
inform the next phase Sigmoid Pharma product
development pipeline”.
Guiding Conway
scientists
through the
glycan
maze Award
collaborator
scoops
Irishanalysis
Times Innovation
therapies.
Taylor’s collaboration with Sigmoid Pharma has
certainly been successful by these metrics with
three co-authored publications to date in two of
In addition to the product that is currently in
the highest ranking scientific journals in the
tract
lined
cells
that
block the contents
results
in both
academic outputs
and the
Postdoctoral researchers from the
features
of therapeutic
the is
type
ofwith
data
each
provides.
phase
II clinical
studies,
Sigmoid
Pharma is
field,
Gastroenterology
andglycoproteins
Proceeding of and
the
of the gut from leaking into the intestine. In an
application
of
research
toward
clinical
product
company,
Sigmoid
Pharma
recently
scooped
The Sigmoid
Pharma-Taylor
collaboration is
National
Institute
for Bioprocessing
to establish
connections
between
developing a LEDDS™-enabled formulation of
National
Academy
of Sciences,
as well glycan
as the
IBD
patient,
this
barrier
is
broken
development
with
indigenous
companies.”
the
overall
Innovation
of
the
Year
award
at
facilitating the
development
of a new
Research
& Training,
under
the
structure and
their functions.
They
classify the
approaches and the
the
hydroxylase
inhibitor
generation
of proprietary
innovative products
contents of the gut leak out into surrounding
the inaugural
Irish
Times
All-Island
therapeutic
approach
for the
treatment of
supervision
of
Conway
Fellow,
dimethyloxaloylglycine
(DMOG)
to are
bring
and
the creation
of high-skilled
jobs.
according to whether
glycans
in about
Commenting
on the
Taylor collaboration,
Dr
areas. The research team in UCD Conway used
Innovation Awards.
The life-science
SME,
inflammatory
bowel disease
by bringing
Professor
Pauline
Rudd, (IBD)
published
a Dr
effective,
safe and targeted
of this
However,
face a number
intact glycoproteins,
aredelivery
chemically,
Coulter
said,researchers
“The collaboration
with the Taylor
a model of IBD and, by applying a new class of
founded the
by UCD
pharmacology
graduate,
More than 15,000 people in Ireland and
together
research
methodology
of
the
potential
therapeutic
agent.glycans or are
review
ofofavailable
technologies
laboratory
clearly
the potentialthe
of
challenges
in demonstrates
relation
glycan
enzymatically
released
An image
the
peptide
structurefor
central
variety
of
in ordertoto
drugs
known as hydroxylase
inhibitors, were
Ivan
Coulter,
hasfrog
actively
collaborated
with
millions
of solutions
people worldwide
areunderstand
living with the
Taylor
group
with
the proprietary
that
can be
realised through
focused
protein
glycosylation
analysis
in the
analysis
primarily
to the
diversity
glycoproteins
themselves.
Each
to the work
of adrug
UCDdelivery
Conway
research
team
able
to almost completely
reverse
theapproach
Conway
Fellow,
Professor
Cormac
Taylor
structural
basis
for due
the
difference
in biological
symptoms
IBD
today.
Current
therapeutic
liquid/emulsion
system,
application
of
basic
research.
The
development
October
issue
of
Nature
Chemical
of
molecular
structure,
construction
can
give
complementary
information
so
symptoms
of
the
disease.
since
being
granted
afront
Science
options
for
this
chronic
debilitating
disease
are
was selected
as the by
coverFoundation
image for the
LEDDS®,
developed
Sigmoid
Pharma.
activity.
of
a smart economy
will depend
on like-minded
Biology.
sequence
extent
of possible
it is important at the outset to decide
Ireland
industry
research
partnership
award
very
limitedand
withthe
surgery
often
being the only
April 2010
edition
of the scientific
journal,
“When
we
applied
these
new
drugs
to
our
IBD
collaborative
partners
identifying
opportunities
Commenting
on the award, Professor Taylor
linkages
withThe
lipids
or peptides.
the level of data required, whether
in 2004.
viable
option.
Sigmoid
product, currently
Thisrealising
particular
XT-7
peptide,
from the
Biochimica
Biophysica
(BBA);and his
model, the gut was tricked into thinking that it
and
basic
and
appliedisolated
research
said,
“We areetdelighted
for Acta
Dr Coulter
Additionally,
naturally
quantitative or qualitative data is needed
in
a phase
II clinical
study,occurring
uniquely
enables for
Glycosylation,
the
most
common
postThe
Irish
Times
award
recognises
the
stellar
skin
of
Silurana
tropicalis,
shows
potential
was being deprived of oxygen. This activated
synergies. This collaboration, initiated through
Proteins
Proteomics.
team
and &
indeed
it reflects well on our
oral
delivery of aare
powerful
drug
without
glycoproteins
typically
only
present
and how much biological material is
translational
modification
conferred
innovative performance
of Sigmoid
Pharma in
protective pathways, which in turn prevented
adrug
SFI research supplement,
theactivity
as it hashighlights
impressive
partnership. A key driver of successful
causing
systemic
side-effects.
at lowdevelopment
levels
and,
currently,
therecompanies
is no
available
their
application
of research
and
development.
on
proteins,
is skin
the
feature
that
most
Peptides
in the
many
species
of frog
the
death offor
theanalysis.
cells that line the
potential
thatgrowth
innovative
indigenous
scientific
research
in of
2010
is meaningful
against
the
of
bacteria
and
Candida
universal
method
for can
rapid
and reliable
The
has
developed
two new
drug
influences
the
function
of industry
proteins
gastrointestinal tract,” explained Professor
working
with
realise.”
havecompany
anti-bacterial
and anti-fungal
properties
normal
conditions,
the
gastrointestinal
May 2010.qxd:Layout
1academia
copy
07/05/2010
Page
3 academia
interaction
of
with
that 13:12 Under
albicans.
However,
this
potential
as
an
antitechnologies,
LEDDS™
and
SmPill™,
which
not
identification
of
glycan
structure.
and
their
Due to
This work
made trial
possible
through
Taylor.
“Our was
pre-clinical
data can
now
as well
as biological
thethe
ability
toactivity.
lyseand
or rupture
Taylor’s
with Sigmoid
Pharma has
only enhance
solubility
permeability of
infectivecollaboration
agent is restricted
by its haemolytic
their
diversity,
glycans
are finely-tuned
funding
Science
Foundation
inform
thefrom
next phase
Sigmoid
Pharma product
mammalian
cells.
This innate
immunity
certainly
been
successful
by
these
metrics
with
the
drug
but
can
deliver
it
to
targeted
locations
Inactivity.
reality, it is the research goals of
development
information
carriers and
there
is now of
a
Ireland, thepipeline”.
EU FP6 Glyfdis and Eurospan
protects
it from attack.tract,
These
properties
three
co-authored
publications
to date the
in two of
in
the gastrointestinal
including
the
the particular
project
that dictate
renewed
emphasis on their
analysis.
programmes,
the
Royal Society and
In
addition
to
the
product that is currently in
the
highest
ranking
scientific
journals
in
the
colon.
frog skin peptides are exciting from the
A change
to the amino
acid structure
of the
most
appropriate
method
of analysis.
ChiefIIScientific
OfficeSigmoid
of the Scottish
phase
clinical
studies,
Pharma is
field,
Gastroenterology
and
Proceeding
of
the
prospect
of being
developedcollaboration
into
Researchers
must
not only
be
aware
XT-7 peptide
can create
an analogue
Government.
The
Sigmoid
Pharma-Taylor
is
With
specific
changes
in the
glycosylation
developing
a LEDDS™-enabled formulation of
National
Academy
of Sciences,
as wellthat
as the
therapeutically
valuable
anti-infective
and antiof
the techniques
available
but
facilitating
the development
of &
a new
retains
anti-infective
properties
butwhat
without the
process
occurring
in health
disease,
the
hydroxylase inhibitor
generation
of proprietary
innovative
products
Reference
cancer agents.
therapeutic
approach
the treatment
information
these
techniques
or
glycan
analysis
can for
provide
both of
dimethyloxaloylglycine
(DMOG)
to bring about
and
the creation
of high-skilled
jobs.
complicating
haemolytic
activity.
The single
A systematic approach to protein
glycosylation
inflammatory
bowel
disease
(IBD)
by
bringing
Meta-analysis
by
UCD
researchers
led
by
of
HIV
areand
critical
in maze.
determining
the
studies
in
humans
have
shown
that
non
combination
of
techniques
will
provide.
effective,
targeted
delivery
thisrate
diagnostic
and Dr
prognostic
information.
analysis:nef
asafe
path
through
the
Karina of
Mariño,
amino
acid15,000
substitution
(glycine
replaced
by
Conway Fellow,
Fellow,
Chandralal
Hewage
andhas
his
More
than
people
in
Ireland
and
together
the research
methodology
of the
Conway
Professor
Denis
Shields
of
disease
progression.
Professor
progression
was
associated
with
gross
The authors succinctly stratify the major
potential
therapeutic
Jonathan Bones,
Jayesh agent.
J Kattla, & PaulineDenis
M
It is also useful in drug discovery and
millions
ofinpeople
worldwide
arefor
living
withofthe
lysine) improves
the
therapeutic
potential
team carried
out there
molecular
of the
Taylor
groupthat
with
the proprietary
determined
is nomodelling
evidence
Shields
searches
for modifiers
of
deletions
theroutinely
nef
gene.
technologies
used
structural
Rudd.
Biology
(October
2010)
CoverNature
ofbelieves
AprilChemical
2010that
edition
of Biochimica
et
Biophysica
production
to
comply
withclear
regulatory
symptoms
IBDoccurring
today. Current
therapeutic
liquid/emulsion
drug
delivery
that
particular
defective
viralsystem,
sequences
in a
progression
rates should
now focus on other
XT-7
peptide
and
its
analogue
[G4K]XT-7
in
this
naturally
peptide.
doi:10.1038/nchembio.437
Acta
(BBA);
Proteins
&
Proteomics.
Nand
O-glycan
analysis
and
describe
requirements
for monitoring
critical
However,
of the research
in the
area to
options
formuch
this chronic
debilitating
disease
are
LEDDS®,
developed
Sigmoid
Pharma.
the
HIV-1 nef
gene orbycertain
regions
of the
host and viral factors. “Systematic evaluation
date limited
has been
based
on observational
or only
case
very
with
surgery
often being the
protein play a significant role in disease
of large quantities of data by bioinformatics
Commenting on the award, Professor Taylor
studies
rather
than
rigorous,
systematic
viable
option.
The
Sigmoid
product,
currently
progression.
can be just as important in refuting
said, “We are delighted for Dr Coulter and his
scientific
This work
by doctoral
in
a phaseevaluation.
II clinical study,
uniquely
enables
hypotheses that are current in the literature, as
team and indeed
it reflects
on our on
HIV-infected
patients
can bewell
categorised
candidate
Ravindra
Pushker
set
out
to
oral delivery of a powerful drug without
it is in discovering unknown patterns”, he said.
partnership.
A key
driverof
ofyears
successful
the basis of the
number
it takes for
determine
in
a
substantially
larger
sample
set
causing systemic side-effects.
scientific
researchto
in AIDS.
2010 is
meaningful
them to progress
Some
patients
if any association exists between disease
This research was funded through Science
Under
normal
conditions,
the
gastrointestinal
interaction
of
academia
with
industry
that
maintain
stable
CD4
lymphocyte
counts
and
progression
and
particular
amino
acidthe
Foundation
andthat
University
College
tract
is lined Ireland
with cells
block the
contents
results
in both
academic
outputs
and
Irish biopharmaceutical development
will
examine whether vitamin D2 In an
Conway
DrPharma
Lorraine
Brennan
and
nmol/l
is prevalent
intoward
as much
of
do not goFellow,
on
to develop
AIDS
even
after
more
differences
orresearch
deletions
within
the as
nefhalf
gene.
ofDublin.
the gut from leaking into the intestine.
application
of
clinical
product
company,
Sigmoid
recently
scooped
enhanced
mushrooms
can
actually
UCD
colleagues,
Dr Anne
andat
European and
USindigenous
populations.
There is
thanoverall
10
years
of infection.
IBD patient, this barrier is broken and the
development
with
companies.”
the
Innovation
theNugent
Year award
On
a per by
patient
basis, there
excess of
A new fortnightly
forumoffor
Conway
graduate
decided
the
members
butwas
it isno
envisaged
([email protected] ) and postdoctoral
increase
ofsurrounding
vitamin D
Professor
Mike
Gibney
from
the
Institute
accumulating
evidence
suggest
thatnef
contents
ofcirculating
the gut leaklevels
out into
the inaugural
Irish
Times
All-Island
Scientists
are
curious
as to
why
these
longLTNP
patients
with
one
orofto
more
defective
and
postdoctoral
researchers
will
be
launched
that
it
will
include
a
mix
technology
researchers,
Dr David
Commenting
on
the
Taylor
collaboration,
Dr
areas.
The research
teamGomez
in aUCD
Conway
used
Innovation
Awards.
The
life-science
SME,
(25(OH)D)
and provide
novel
vehicle
of
Food
and
Health
have
been
awarded
vitamin
D
status
may
play
a
role
in
the
term,
nonprogressor
(LTNP)
patients
do
not
sequences
when
compared
to
progressors.
Coulter
said,
“The
collaboration
with
the
Taylor
in May 2010.
Thispharmacology
initiative will give
early- Dr
overviews, informal and formal research
([email protected])
and Dr Craig
Slattery
aReference:
model
of IBD
and, byof
applying
a new
class of
founded
by
UCD
graduate,
for
dietary
delivery
vitamin
D.
funding
from
Monaghan
Mushrooms
development
of
diseases
those
develop AIDS.
This
may reflect
differences
in
While the high
frequency
of beyond
amino
acid
laboratory
clearly
demonstrates
the
potential
stageCoulter,
researchers
the opportunity
to talkwith
about
seminars, PhD viva rehearsals and career
([email protected]
) invite
for
Meta-analysis
test
the association
ofsuggestions
HIV-1 nefwere
amino
drugs
knowntoas
hydroxylase
inhibitors,
Ivan
has
actively
collaborated
theperform
host, viralresearch
genetics
or environmental
replacement
at particular
residues
is indicative
that
can be
through
focused
to
their
vitamin
D
related
to realised
bone
acid
and
deletions with
disease
progression.
able
to
almost
completely
reverse
the
Conway
Fellow,
Professor
Cormac
Taylor
sciencethat
and
issues
thaton
concern
them
in an
development
talksmetabolism.
from
within
and
beyond
thedifferences
forum
schedule.
factors
could
potentially
be
exploited
for
of
rapid
evolvement,
permutation
testing
application of basic research. The development
Ravindra Pushker, Jean-Marc Jacquē, Denis C. Shields.
enhanced
mushrooms.
symptoms
of the disease.
since
being
granted
a with
Science
Foundation
informal
environment
refreshments
academia.
Forum
committee
members,
PhD
the
treatment
of the disease.
showed
that
residues
with
more
replacements
Journal of Virology, Apr 2010 p3644-3653
of
a smart
economy
will
depend
on
like-minded
Meta-analysis
byresearch
UCD researchers
by
of HIV nef are critical in determining the rate
studies
have
shown
that
non
There
isinMr
ahumans
real
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diagnostic strategies and treatment options to
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Taylor. “Our pre-clinical trial data can now
infection
with LEDDS™
nef-deficient
shows
an not
The researchers conclude that current data
framework
to provide
a comprehensive
high-Pharma has
Taylor’s
collaboration
with Sigmoid
only
enhance
the solubility
andand
permeability
of
inform the next phase Sigmoid Pharma product
provides no evidence that individual residues
attenuated
course
of infection
some
Glycosylation isthe
the
most
and
throughput certainly
HPLC data
analysis
platform
for metrics with
been
successful
by these
drug
butcommon
can deliver
it to targeted locations
development pipeline”.
structurally diverse
and annotation
experimental
co-authoredofpublications
to date in two of
in thepost-translational
gastrointestinal tract, including thethe storagethree
modification ofcolon.
proteins. More than half of all
data. The integration
next generation
In addition to the product that is currently in
the highestofranking
scientific journals in the
GlycoExtractor advances glycan data manipulation
Zebrafish model gives insights into diabetic blindness
Success in EU FP7 call
Bioinformatic analysis of HIV progression studies
Director’s
Message
Zebrafish
model gives
insights into diabetic blindness
Conway
collaborator
scoops
Irish Times Innovation Award
GlycoExtractor
advances
glycan data
manipulation
Director’s
Message
UCD CONWAY INSTITUTE OF BIOMOLECULAR & BIOMEDICAL RESEARCH
May 2010.qxd:Layout 1 copy
07/05/2010
13:12
Page 3
Conway collaborator
Times
Innovation Award
Mismanagement
of cellularscoops
waste Irish
linked
to Alzheimer’s
Conway collaborator scoops Irish Times Innovation Award
Conway
collaborator
scoops research
Irish Times Innovation Award
2010 Festival
medal
for signalling
Irish biopharmaceutical development
company, Sigmoid Pharma recently scooped
IrishMarc
biopharmaceutical
the
overall
Innovationreceived
ofdevelopment
the Year
award
at
Dr
Birtwistle
the
2010
company,
Sigmoid
Pharma
recently
scooped
the
inaugural
Irish
Times
All-Island
UCD
Conway
Festival
of
Research
&
the overall Awards.
Innovation
thesponsored
Year award
at
Innovation
Theoflife-science
SME,
Innovation
gold medal,
by
the inaugural
Irish
Times All-Island
founded
by UCD
pharmacology
graduate, Dr
Roche,
for
his
research
to decipher
Innovation
Awards.
The life-science
SME,
Ivan
Coulter,
has actively
collaborated
the
mechanism
cells use
tograduate,
turn onwith
founded Fellow,
by UCD Professor
pharmacology
Dr
Conway
Cormac
Taylor
and
biological
decisions.
As part
of
Ivan off
Coulter,
has actively
collaborated
with
since
being
granted
a
Science
Foundation
this
prize,
MarcProfessor
is selected
as the
UCD
Conway
Fellow,
Cormac
Taylor
Ireland
industry
research
partnership
award
representative
forathe
2010Foundation
Roche
since being granted
Science
in
2004.
Researcher
of the
Yearpartnership
competition.
Ireland industry
research
award
The
Irish Times award recognises the stellar
in 2004.
innovative
performance
of Sigmoid
Pharma in
A
postdoctoral
researcher
in Systems
The
Irish Times award
recognises
the stellar
their
application
ofDr
research
and was
development.
Biology
Ireland,
Birtwistle
innovative
performance
of Sigmoid
Pharma in
initially
shortlisted
from over
85
The
hasofdeveloped
twodevelopment.
newConway
drug
theircompany
application
research
and
scientists
to
present
his
work
at
the
technologies,
LEDDS™
and
SmPill™,
The company has developed two new which
drug not
moderated
sessions
held
during
only
enhanceposter
the
solubility
permeability
of
technologies,
LEDDS™
and and
SmPill™,
which not
the
10th
annual
UCD Conway
Festival
the
but
can
it toand
targeted
locations
onlydrug
enhance
the deliver
solubility
permeability
of
of
Research
& Innovation
on
Thursday,
in
gastrointestinal
tract,
the 13:12
thethe
drug
but can
deliver
it07/05/2010
toincluding
targeted locations
May 2010.qxd:Layout
1 copy
September
16th
in
the
Institute.
colon.
in the gastrointestinal tract, including the
colon.
The
Sigmoid Pharma-Taylor
He impressed
the judgingcollaboration
committee is
with
the description
of hisof
work
facilitating
thePharma-Taylor
development
a newthat is
The Sigmoid
collaboration
uses
a systems
biology
approach
facilitating
the
development
oftreatment
a new toof
therapeutic
approach
for the
understand
how
cancer
cells
therapeutic approach
for the
treatment
of
inflammatory
bowelbreast
disease
(IBD)
by bringing
listen
tothe
two
different
signals.
inflammatory
bowel
disease
(IBD)One
by
together
research
methodology
ofbringing
the
signal
causes
these
cells
to grow,of the
together
the research
Taylor
group
with
the methodology
proprietary
whereas
thewith
other
these
cells to
Taylor group
thecauses
proprietary
liquid/emulsion
drug
delivery
system,
differentiate.
These
signals
activate
or
liquid/emulsion
drug by
delivery
system,
LEDDS®,
developed
Sigmoid
Pharma.
inactive
potential,
LEDDS®,subsequent
developed bysignalling
Sigmoid Pharma.
which whenon
perturbed
faulty have
Commenting
the award,orProfessor
Taylor
Commenting
theinaward,
Professor
been
implicated
theforprogression
of his
said,
“We
are on
delighted
Dr
Coulter Taylor
and
said, “We are
delighted
for Dr Coulter and his
numerous
types
cancer.
team
and indeed
it of
reflects
well on our
team and indeed it reflects well on our
partnership. A key driver of successful
partnership. A key driver of successful
scientific research in 2010 is meaningful
scientific research in 2010 is meaningful
interaction
with industry
industry that
that
interaction of
of academia
academia with
results in both academic outputs and the
application of research toward clinical product
results
in both
academic
outputs
and the
development
with
indigenous
companies.”
The
cells
in our
bodies
continually
listen
application
toward
clinical product
for
signals of
in research
their local
environment
Commenting with
on the
Taylor collaboration,
development
indigenous
companies.”
and
then make
appropriate
decisions Dr
Coulter
said,body
“Thefunctionality.
collaboration with
the Taylor
for
proper
A major
Commenting
on the
Taylor collaboration,
Dr
laboratory clearly
demonstrates
the research
potential
challenge
in
current
biomedical
Coulter
said,
“The collaboration
with the Taylor
that
can
be
realised
through
focused
is
to understand
the languagethe
ofpotential
this
laboratory
clearly
demonstrates
applicationin
ofterms
basic
research.
The development
listening
of
the chemical
that
can
be
realised
through
focused
of a smart occurring
economy will
depend
like-minded
reactions
within
theon
cell.
application
basic research.
The opportunities
development
collaborative
partners
identifying
Central
to of
this
systems
biology
approach
of a smart economy will depend on like-minded
and
realising
basic andunderstanding
applied researchinto
is
casting
biological
partners identifying opportunities
acollaborative
mathematical
formalism initiated
that allows
synergies.
This collaboration,
through
and realising basic and applied research
the
of computers
andhighlights
maths tothe
a SFIuse
research
supplement,
synergies.
This
collaboration,
initiated
through
understand
the system
works.
that how
innovative
indigenous
companies
apotential
SFI research
supplement,
highlights
the
working
with
academia
can
realise.”
potential that innovative indigenous companies
Dr Viviana Marzaioli, Dr Sandra Malynn,
working
with academiawith
canSigmoid
realise.”Pharma has
Taylor’s collaboration
Melissa Morine, Karen Harford, Lisa Shine
certainly
beenAhmed
successful
by
these
metrics
and
Tauseef
received
category
Taylor’s
collaboration
with
Sigmoid
Pharmawith
has
three
co-authored
publications
to
date
in two
of
prizes
for
delivering
concise
overviews
certainly
been
successful
by
these
metrics
with
Page 3
of
work
in the
themedjournals
moderated
thetheir
highest
ranking
scientific
three
co-authored
publications
to
date in
in the
two of
poster
sessions.
field,highest
Gastroenterology
and Proceeding
the
ranking scientific
journals inof
thethe
National
Academy of Sciences,
as well as
field,
Gastroenterology
and Proceeding
of the
Conference
heard
keynote
National
Academy
of Sciences,
as
well
as the
generation
ofdelegates
proprietary
innovative
products
lectures
from
Professor
Rosemary
generation
of proprietary
innovative
and the creation
of high-skilled
jobs.products
O’Connor,
University
Collegejobs.
Cork on
and the creation
of high-skilled
Morepotential
than 15,000
people in Ireland
and
the
of signalling
regulators
More
than
15,000
in Ireland
andwith the
millions
of therapeutics
people people
worldwide
are
living
as
cancer
and
Professor
millions
of
people
worldwide
living with the
Michael
White,
University
oftherapeutic
Liverpool,
symptoms
IBD today.
Currentare
symptoms
today.
Current
therapeutic
spoke
biology
approaches
optionsabout
for IBD
thissystems
chronic
debilitating
disease are
options
this
debilitating
disease
are
that
arefor
useful
to
study
cell signalling.
very limited
withchronic
surgery
often
being
the only
very
often
beingcurrently
the only
viablelimited
option.with
Thesurgery
Sigmoid
product,
viable
option.
The Aebersold,
Sigmoid
currently
Professor
Ruedi
ETH Zurich,
in a phase
II clinical
study, product,
uniquely
enables
in a phase the
II clinical study,
uniquely
enables
delivered
lecture
of the
oral delivery ofplenary
a powerful
drug without
oral delivery of a powerful drug without
causing systemic side-effects.
causing systemic side-effects.
Under normal
normal conditions,
conditions, the
the gastrointestinal
gastrointestinal
Under
tract is lined with cells that block the contents
of the gut from leaking into the intestine. In an
tract
is lined
with
cells that
block
the
IBD
patient,
barrier
ishow
broken
andcontents
the
Festival
andthis
described
proteomic
of
the gutof
from
leaking
intestine.
In an
contents
thecan
gut generate
leakinto
out the
into
surrounding
experiments
complete,
IBD
patient,
thisand
barrier
is in
broken
and
areas.
The research
team
UCD Conway
used
reproducible
quantitative
datathesets
contents
ofideally
the gut
leak
out
surrounding
areof
suited
tointo
support
athat
model
IBD
and,
by applying
a newthe
class of
areas.
The
research
team in UCD
Conwaywere
used
generation
of
models
in
drugs
known
asmathematical
hydroxylase
inhibitors,
aable
model
ofbiology
IBD completely
and,research.
by applying
systems
to almost
reversea new
the class of
drugs
known
symptoms
of as
thehydroxylase
disease. inhibitors, were
able
almost
completely
reverse the
Theto10th
annual
UCD Conway
Festival of
“When
we of
applied
these new
to our IBD
symptoms
disease.
Research
& the
Innovation
wasdrugs
sponsored
by
model,
the gut&was
tricked into thinking that it
BioSciences
Roche.
“When we applied these new drugs to our IBD
was being deprived of oxygen. This activated
model, the gut was tricked into thinking that it
protective pathways, which in turn prevented
was being deprived of oxygen. This activated
the
death of
the cellswhich
that line
the prevented
protective
pathways,
in turn
gastrointestinal
explained
the
death of the tract,”
cells that
line theProfessor
Taylor. “Our pre-clinical
trial dataProfessor
can now
gastrointestinal
tract,” explained
inform “Our
the next
phase Sigmoid
product
Taylor.
pre-clinical
trial dataPharma
can now
development
pipeline”.
inform
the next
phase Sigmoid Pharma product
development pipeline”.
In addition to the product that is currently in
phase
II clinical
Pharma in
is
In
addition
to thestudies,
productSigmoid
that is currently
developing
a LEDDS™-enabled
phase
II clinical
studies, Sigmoidformulation
Pharma is of
developing
a LEDDS™-enabled
formulation of
the hydroxylase
inhibitor
the
hydroxylase inhibitor(DMOG) to bring about
dimethyloxaloylglycine
dimethyloxaloylglycine
(DMOG)
to bring
about
effective, safe and targeted
delivery
of this
effective,
and targeted
potential safe
therapeutic
agent.delivery of this
potential therapeutic agent.
Prof. Walter Kolch, Director, UCD Conway; Simon
Thorpe, Roche Diagnostics Ltd; Dr Marc Birtwistle,
winner 2010 UCD Conway Festival gold medal; Dr
Oliver Blacque, Chair, Conway Lecture & Seminar
Series committee.
Conway
collaborator age
scoops Irish Times Innovation Award
Science in
the information
Irish global
biopharmaceutical
development
The
scientific community
In the
company, Sigmoid
recently
scooped
information
age isPharma
not only
concerned
the overall
Innovation
of thediscovery
Year award
with
advancing
scientific
butat
the inaugural
Irish
Times
All-Island of
with
improving
the
methodology
Innovation
Awards.
The life-science
SME,
the
scientific
process.
There are two
recent
of Conway researchers
foundedexamples
by UCD pharmacology
graduate, Dr
Ivan Coulter,this
has
actively
collaborated
with
influencing
led by
Meta-analysis
by work.
UCD researchers
results
in bothproposal,
academic outputs
The
MIAPAR
which and the
application
of research
toward
was
outlined
earlier this
yearclinical product
development
with indigenous
companies.”
in
a communication
to Nature
Biotechnology,
allows
subsequent
users
Commenting on the Taylor collaboration, Dr
to
make a fully informed evaluation of
Coulter said, “The collaboration with the Taylor
the validity of conclusions drawn from
laboratory clearly demonstrates the potential
use
of ainparticular
product.
studies
humans have
shown
shown that
that non
non
since
being
granted
a Science
Foundation
Conway
postdoctoral
Dr Niall
determined
that
there
isresearcher,
no clear
evidence
Ireland
industry
research
partnership
award
Haslam
from the
Complex
Adaptive
that particular
particular
defective
viral
sequences
in
that
defective
viral &
sequences
in
in
2004.
Systems
Laboratory
(CASL)
worked
the
HIV-1
nef
gene
or
certain
regions
of
the
the HIV-1 nef gene or certain regions ofon
the
the
minimum
information
about
protein
play
significant
role
The
Irishplay
Times
award recognises
theprotein
stellar
protein
aa significant
role in
in disease
disease
affinity
reagent
(MIAPAR)
proposal;
an in
progression.
innovative
performance
of Sigmoid
Pharma
progression.
international
to define
a checklist
their applicationeffort
of research
and development.
HIV-infected information
patients can
categorised
on
of
the
HIV-infected
can be
bedescribing
categorised
on
Therequired
companypatients
has developed
two new drug
the basis of of
theanumber
ofbinding
years it reagent
takes for
properties
protein
the basis of the
numberand
of years
it takes
for not
technologies,
LEDDS™
SmPill™,
which
them every
to progress
to AIDS. Some
patients
with
known
partner.
only
the solubility
and
permeability
themenhance
to progress
to binding
AIDS. Some
patients of
application of basic research. The development
Dr
Niall Haslam
that “by
deletions
the nefexplains
gene.depend
of
a smartineconomy
on like-minded
providing
MIAPAR will
compliment
collaborative
partners
identifying
opportunities
However,
much
of
the
research
in
documents
for
the
affinity
reagents
However, much of the research in the
the area
area to
to
and
realising
basic and
applied
research
date
been
observational
used
in experiments
with
theor
date has
has
been based
based on
onalong
observational
or case
case
synergies.
This
collaboration,
initiated
through
studies
than
systematic
scientific
communication
the research,
studies rather
rather
than rigorous,
rigorous,of
systematic
ascientific
SFI research
highlights
the
evaluation.
This
work
by
scientists
cansupplement,
support
the
efficient
use of
scientific
evaluation.
This
work
by doctoral
doctoral
potential
that
innovative
indigenous
companies
candidate
Ravindra
Pushker
set
out
to
the
products
for
the
benefit
of
the
entire
candidate
Ravindra
Pushker
set
out
to
working
with
can realise.”
determine
in academia
a substantially
larger sample set
scientific
determinecommunity.”
in a substantially larger sample set
tract
lined with cellsinthat
block the
contents
tasksis encountered
a typical
protein
of
the gut fromproject
leaking while
into the
intestine. In an
engineering
integrating
IBD
this barrier
broken and the
datapatient,
deposition
in theis process.
contents of the gut leak out into surrounding
areas.
The research
teambenefits
in UCD Conway
Commenting
on the
of PEAT,used
aDr
model
of IBD
and,“PEAT
by applying
a new class
Nielsen
said,
incentivises
dataof
drugs
ascritical
hydroxylase
were
storage
byare
integrating
theinhibitors,
processthe
with
of
nef
in
rate
of HIV
HIVknown
nef
are
critical
in determining
determining
the
rate
able
to
almost
completely
reverseapplication.
the
the
analysis
tools
in a single
of
progression.
Professor
Denis
of disease
disease
progression.
Professor
Denis
symptoms
of the that
disease.
Through
widespread
use of for
PEAT,
we canof
Shields
Shields believes
believes
that searches
searches
for modifiers
modifiers
of
Bioinformatic analysis of HIV progression studies
Conway Fellow,
Fellow, Professor
Professor Cormac
Taylor has
Denis Shields
Conway
maintain stable CD4 lymphocyte counts and
the
drug but
canCD4
deliver
it to targeted
locations
maintain
stable
lymphocyte
counts
and
do not go on
to develop
AIDS even
after more
Currently,
there
are tract,
multiple
sources
in
the
gastrointestinal
including
the more
do
not
go
on
to
develop
AIDS
even
after
than
10 years of on
infection.
of
information
affinity reagents
colon.
than 10 years of infection.
in
existence including commercial
Scientists are curious as to why these longThe Sigmoid
Pharma-Taylor
collaboration
is
catalogues,
experimental
results
Scientists
curious as
to why
these longterm, non-are
progressor
(LTNP)
patients
not
facilitating
the
development
of patients
a new
published
in scientific
journals
and do
term,
nonprogressor
(LTNP)
do
develop AIDS. This may reflect differencesnot
in
web
portals
that
centralise
affinity
therapeutic
approach
for
the
treatment
of
develop
This mayorreflect
differences in
the host,AIDS.
viral genetics
environmental
reagent
properties
from
many
sources.
inflammatory
bowel
disease
(IBD)
by
bringing
the
host,that
viral
genetics
or environmental
factors
could
potentially
be exploited for
However,
available
information
together thethe
research
methodology
of the
factors
that could
potentially
be exploited for
the
treatment
of
the
disease.
may
incomplete,
inaccessible,
Taylorbe
group
with the proprietary
the
treatment
of
the
disease.
unsubstantiated
ordelivery
may even
appear
liquid/emulsion
system,
Studies in modeldrug
organisms
have
shown that
contradictory
due
to
of precision
in
LEDDS®,
developed
by lack
Sigmoid
Pharma.
infectioninwith
nef-deficient
virus
shows
Studies
model
organisms
have
shownanthat
target
orwith
sample
descriptions.
attenuated
course
of
infection
and
somean
infection
nef-deficient
virus
shows
Commenting on the award, Professor Taylor
attenuated
course
of infection
and some
said,
“We are
delighted
for Dr Coulter
and his
team and indeed it reflects well on our
partnership. A key driver of successful
scientific research in 2010 is meaningful
that can be realised through focused
progression was associated with
with gross
gross
if any association
exists
Taylor’s
collaboration
withbetween
Sigmoiddisease
Pharma has
if any association
exists
between
disease
progression
and
particular
amino
acid
Conway
Fellow,
Dr JensbyErik
Nielsen
certainly
been
successful
these
metrics with
progression
and
particular
amino
acid
differences
or deletions
withinato
the
nef in
gene.
and
his
team
have
created
protein
three
co-authored
publications
date
two of
differences
or
deletions
within
the
nef
gene.
engineering
analysis
tool (PEAT)
that
the
highest
ranking
scientific
journals
in
the of
On
a
per
patient
basis,
there
was
no
excess
facilitates
the analysis
ofProceeding
experimental
On a Gastroenterology
per
patient
basis,
there
wasdefective
no excess
field,
and
of the
LTNP
patients
with
or
more
nefof
data
generated
inofone
the
course
a as the
LTNP
patients
with
one
or
more
defective
nef
National
Academy
Sciences,
asof
well
sequencesproject
when compared
toensuring
progressors.
research
as
well
as
that
generation
of
proprietary
innovative
products
sequences
when
compared
to
progressors.
While
the
high
frequency
of
amino
acid
this
valuable
data
is available
foracid
future
and
the
creation
of high-skilled
jobs.
While
the
high
of amino
replacement
at frequency
particular
residues
is the
indicative
use.
The team
recently described
replacement
at
particular
residues
is
indicative
of rapid
evolvement,
permutation
testing
application
in thepeople
journal,
Nucleic
More
than
15,000
in Ireland
andAcids
of
rapid
evolvement,
permutation
testing
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residues
with
more
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Research.
millions of people worldwide are living with the
showed
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PEAT
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very
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surgery
often
being
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information
management
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residues
The researchers
conclude
that current
data
has
been
designed
to
address
specific
viable
option.
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Sigmoid
product,
currently
provides no evidence that individual residues
in a phase II clinical study, uniquely enables
oral delivery of a powerful drug without
causing systemic side-effects.
create
and share
high quality
datasets
progression
rates
should
now
focus
progression
ratesthese
should
now
focus
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other
“When
we applied
new
drugs
toon
ourother
IBD
on
the
connections
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protein
host
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viral
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evaluation
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gut was
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sequence,
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thatcells
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as
through
funding
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itit is
in
discovering
unknown
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he said.
gastrointestinal
tract,”
explained
Professor
is
in
discovering
unknown
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Union Framework Programmes (EU he
FP)said.
Taylor.
“Our pre-clinical
trialthrough
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funded
Science
6This
& 7.research
PEAT iswas
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funded
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This
research
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funded
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Science
inform
the next
phase
Sigmoid
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Foundation
Ireland
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University
College
awards
from
Science
Ireland,
Foundation
Ireland
and Foundation
University College
development
pipeline”.
Dublin.
the
Health
Research
Board,
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UCD
Ad Astra
In
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phase II clinicalPEAT
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developing
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hydroxylase
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Reference:
Reference
:
Reference: to test the association
Meta-analysis
ofto
HIV-1
nef amino
dimethyloxaloylglycine
(DMOG)
bring
Bourbeillon J et al.Minimum
information
aboutabout
acid
differences
with
disease
progression.
Meta-analysis
testdeletions
the
association
of HIV-1
nef amino
effective,
safetoand
and
targeted
delivery
of
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protein Pushker,
affinity
reagent
(MIAPAR).
Nature
Jean-Marc
Denisprogression.
C. Shields.
acid differences and
deletionsJacquē,
with disease
Biotechnology
2010
Jul;28(7):650-3.
potential
therapeutic
agent.
Journal
Virology,Jean-Marc
Apr 2010 p3644-3653
RavindraofPushker,
Jacquē, Denis C. Shields.
Journal of Virology, Apr 2010 p3644-3653
Farrell D et al. Capturing, sharing and analysing
biophysical data from protein engineering and
protein characterization studies Nucl. Acids Res.
(2010) 38(20): e186 doi:10.1093/nar/gkq726
UCD
Conway researchers
believe that
Irish biopharmaceutical
development
acompany,
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cellular
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lysosomes
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the inaugural
Irish
Times All-Island
disease.
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founded
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pharmacology
graduate,
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of
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neuron
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both academic
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cognitive
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applicationloss
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clinical
product
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Commenting
Taylor Research
collaboration,
Dr
a study ledonbytheHealth
BoardSuccess in EU FP7 call Infunded
Coulter said,
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research
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laboratory
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Success
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disease (CKD)
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Frances
Platt
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Ryan
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aIreland
fine balance
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identifying
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lysosomes
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inequilibrium
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basic
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McMorrow
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Ryan have
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lysosomes.
disciplinary
research
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25
partconstantly
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The Irish Times award recognises the stellar
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copy
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Page
3 in Alzheimer’s
programme.
technologies,
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not
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consortium
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Taylor’s
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and
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lysosomes
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Dr.successful
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further
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understanding
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kidney
three
co-authored
publications
to
date
in
two
in
the
gastrointestinal
tract,
including
the
researchers
Dr.
Slattery and
Natalia of
Syskid
(www.SysKid.eu)
was established
to
digested
into basic building
blocks (sugars,
lysosomes
butCraig
notscientific
delivered
toDr.
lysosomes
the highest
rankingcell
journals
in the
colon. our
Martin,
will
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animal
further
understanding
of chronic
kidney
amino
acids
and lipids) that
can then
be
by
AVs.
Instead,
their
research
field, Gastroenterology and Proceeding of the
reused
to
make
new
parts
of
the
cell.
that
amyloidogenic APP fragments are
The Sigmoid Pharma-Taylor collaboration is
National Academy of Sciences, as well as the
Neurons
for manyofdecades
delivered to lysosomes from the plasma
facilitatingsurvive
the development
a new in
generation of proprietary innovative products
the
humanapproach
brain andforhave
exceptionally
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therapeutic
the treatment
of
and the creation of high-skilled jobs.
efficient
autophagy.
However,
inflammatory
bowel disease
(IBD)in
bybrains
bringing
of
people
affected
by
Alzheimer’s
disease,
Commenting
on the
study,
Dr. Boland
More than 15,000
people
in Ireland
and
together the research methodology of the
the
ability
ofwith
neurons
to clear out
cellular
said,
highlights
the important
role the
cells,“This
tissues
and fluids.
Glycomics
needs
the proprietary
supporting
framework
millions
of people
worldwide
are living with
Taylor
group
the
waste
is compromised.
This
leads
toand
an
that
lysosomes
play
in removing
cellular
of
extensive,
well-curated
databases
symptoms
IBD
today.
Current
therapeutic
cells,
tissues
and
fluids.
Glycomics
needs
the delivery
supporting
framework
liquid/emulsion
drug
system,
Commercial neurons,
packages that support
HPLC
accumulation
of waste
containing
vesicles
waste
clarifying
theare
flexible
analytical
tools.
Currently,
this
optionsfrom
for this chronicwhile
debilitating
disease
of
extensive,
well-curated
databases
andfield
LEDDS®,
developed
by Sigmoid
Pharma.
instruments
cannot facilitate
the
extraction
of
Commercial
packages
that
support
HPLC
or
autophagic
vacuoles
(AVs) thatthis
impair
route
APP fragments
take
on
their
delivery
very limited
with surgery
often
being
the
only
of study
lacks the
established,
flexible
analytical
tools.
Currently,
field
to lysosomes.
We
believe
that the
therapies
tract
is lined with
cells
that block
contents
aimed
at from
improving
waste In an
of
the gut
leakinglysosomal
into the intestine.
disposal
could
alleviate
IBD
patient,
this prevent
barrier isand
broken
and thethe
neuronalofdysfunction
associated
with
contents
the gut leak out
into surrounding
Alzheimer’s
disease.”
areas.
The research
team in UCD Conway used
a model of IBD and, by applying a new class of
This work
was
grants from
drugs
known
as supported
hydroxylaseby
inhibitors,
were
the Health
Research
Board
of Ireland,
able
to almost
completely
reverse
the
models
to
identify
processes
involved
in
early
the Wellcome
Science Foundation
symptoms
of theTrust,
disease.
CKD progression
investigate
Ireland
and UCDand
Seed
Fund. novel
models
to identify
processes
“When
we
applied
these new
drugs
toinour
IBD
strategies
for preventing
andinvolved
slowing
theearly
Reference
CKD
progression
andtricked
investigate
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gutof
was
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progression
the
disease.
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studies
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Boland
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Smith
DA,
Mooney
D, Jung
SS,
Walsh
DM,
Platt
strategies
for
preventing
slowing
the in
was
beingMacroautophagy
deprived
of oxygen.
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activated
be(2010)
integrated
with clinical
epidemiological
FM
isand
notand
directly
involved
progression
ofofthe
These
studies
will
protective
pathways,
which
in turn
prevented
the
metabolism
amyloid
precursor
protein.
Journal
of
studies
across
thedisease.
consortium
using
systems
Biological
285:37415-37426.
be
integrated
withcells
clinical
epidemiological
the
deathChemistry
of the
thatinand
line
theto develop new
biology
methodologies
order
studies
across
the
consortium
using
systemsto
gastrointestinal
tract,”
explained
Professor
diagnostic
strategies
and
treatment
options
biology
methodologies
in
order
to
develop
Taylor.
“Our
pre-clinical
trial
data
can
now new
prevent CKD development. Email
diagnostic
treatment
options
inform
the strategies
next phaseand
Sigmoid
Pharma
[email protected]
for
details
of a product
PhDto
prevent
CKD development.
Email
development
pipeline”.
position currently
available.
[email protected] for details of a PhD
In addition
to the product
position
currently
available.that is currently in
phase II clinical studies, Sigmoid Pharma is
developing a LEDDS™-enabled formulation of
the hydroxylase inhibitor
dimethyloxaloylglycine (DMOG) to bring about
effective, safe and targeted delivery of this
potential therapeutic agent.
EUROCarbDB, a research infrastructure design
study funded abyresearch
the EU 6th
Frameworkdesign
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infrastructure
Programme.
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study
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6th
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Cortical neuron showing the co-localisation of autophagic
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http://glycobase.nibrt.ie:8080/DemoGlycoExtra
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ctor/mainPage.
ctor/mainPage.
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GlycoExtractor advances glycan data manipulation
GlycoExtractor advances glycan data manipulation
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Commenting
the
award,
Professor
viable
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TheofSigmoid
currently
comprehensive
centralised
data Taylor
of
study lackson
theand
established,
this
bottleneck
within
high-throughput
large
quantities
of
data.
In
an
effort
to
alleviate
said,
“We
are
delighted
for
Dr
Coulter
and
his
in a phase II clinical study, uniquely enables
comprehensive
and centralised
data
collections, standards
and information
this
bottleneck
team and indeed
it reflects
well
on our
glycomic
projects,
thehigh-throughput
NIBRT
have
oral
delivery
ofwithin
a powerful
drugteam
without
collections,
standards
and
information
reporting protocols
that
exist
within
glycomic
projects,
the NIBRT
teaminterfaces
have
partnership.
A key driver
of successful
developed
a
web-based
tool
that
causing
systemic
side-effects.
reporting
protocols
that
exist
within
genomics and proteomics.
developed
a web-based
tool that interfaces
scientific research
in 2010 is meaningful
with the Waters
chromatography
software
genomics
and proteomics.
Under
conditions,
the gastrointestinal
thenormal
Waters
chromatography
software
interaction of 1
academia
industry
that
package
to
improve
and automate
the export
Researchers,
Dr
Natalia with
Artemenko
and
Dr 13:12 with
May 2010.qxd:Layout
copy
07/05/2010
Page
3
results
intoboth
academic
outputs and
the
IrishElton
biopharmaceutical
development
Dr.
Rexhepaj
received
theand
European
(IHC) annotation
andautomate
facilitate
the
Researchers,
Dr Natalia
Dr
package
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and
export
of data to
various
file
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Matthew Campbell
fromArtemenko
the National
Institute
application
ofof
research
toward
clinical
product
company,
Pharma
recentlyInstitute
scooped
Society
ofSigmoid
Toxicologic
Pathology
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translation
biomarker
discovery
to
Matthew
Campbell
from
the
National
of
data to various
file formats
for
subsequent
of
Bioprocessing
Research
&
Training
(NIBRT)
analysis.
The
modular
architecture
of
the tool
development
with indigenous
companies.”
the
overall
Innovation
of the
Year award
at
thesis
award
in
Budapest,
Hungary
on
clinical
implementation.
of
Bioprocessing
Research
&
Training
(NIBRT)
analysis.
The
modular
architecture
of
the
tool
led
by
ConwayIrish
Fellow,
Professor
Pauline Rudd
also facilitates the manipulation of data from
theby
inaugural
Times
All-Island
led
Conway30th
Fellow,
Professor
Pauline
Rudd
also
facilitates
thethe
manipulation
of data from
September
2010.
This
prestigious
Commenting
on
Taylor
collaboration,
Dr
have
developed
an
open
access,
web-based
other
data
management
systems.
Innovation
Awards.
life-science
SME,
have
developed
an open
access,
web-based
other
data
management
systems.with
prize,
sponsored
byThe
Boehringer
Ingelheim
Dr. Elton
Rexhepaj,
together
withthe
Conway
Coulter
said,
“The collaboration
Taylor
interface
thatUCD
facilitates
extraction,
querying
founded
by
pharmacology
graduate,
Dr
interface
that
facilitates
querying
The NIBRT
team are
now working
to integrate
Pharma
GmbH
& Co.extraction,
KG, data
is offered
every
Fellow,
Professor
William
Gallagher
and
laboratory
clearly
demonstrates
the
and
sharing
of HPLC-glycan
generated
in
The
NIBRT
team are
now working
topotential
integrate
Ivansharing
Coulter,
actively collaborated
with
and
of has
HPLC-glycan
data
generated
in
GlycoExtractor
withthrough
the
EUROCarbDB
that
can
be
realised
focused
second
year
for
a
thesis
in
toxicological
clinician-scientist,
Dr.
Donal
Brennan
high
throughput
processes.
GlycoExtractor
with
the
EUROCarbDB
Conway
Fellow,processes.
Professor Cormac Taylor
high
throughput
framework
to basic
provide aa comprehensive
highapplication
of
Theproprietary
development
pathology.
created
IHC-MARK;
novel,
framework
to
provideresearch.
a comprehensive
highsince being granted a Science Foundation
Glycosylation
is
the
most
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and
throughput
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data
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platform
for
Meta-analysis
by
UCD
researchers
led by
studies
in humans
have
shown
that
nonfor
of
a smart
economy
will
depend
on
like-minded
image
analysis
for the
assessment
Glycosylation
is the
most
common
throughput
HPLC
data
analysis
platform
Ireland industry
research
partnership award
Conway Fellow,
Professor
Denis
Shieldsanhas
progression
was
associated
gross
theIHC-based
storageand
and
annotation
experimental
structurally
diverse
post-translational
collaborative
partners
identifying
opportunities
Rexhepaj’s
doctoral
thesis
describes
of
markers.
This
technology,
structurally
post-translational
the
storage
annotation
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experimental
in 2004. diverse
determined of
that
there isMore
no clear
deletions
in
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nefand
gene.
data.realising
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integration
next
generation
modification
ofimage
proteins.
More
thanevidence
halfofofall
all
and
basic
applied
research
modification
proteins.
than
half
data.
The
integration
ofofisnext
generation
automated,
analysis
approach
termed
currently
in
The
Times
award
recognises
that Irish
particular
defective
viral
in
synergies.
This
collaboration,
initiated
through
gene
products
have
been
shown
tothe
bestellar
bioinformatic
tools
will
further
the treatment,
disease
(CKD)
and
improve
patient
Conway
researchers
led shown
by
Dr.sequences
Tara
bioinformatic
tools
will
further
the
gene
products
have
been
to
be
for
clinical
pathologists
and
biomedical
beta-testing
phase
and
provides
non-to
However,
much
of
the
research
in thea area
innovative
performance
of
Sigmoid
Pharma
in
the
HIV-1
nef
gene
or
certain
regions
of
the
a
SFI
research
supplement,
highlights
the
glycosylated.
With
manyspecific
specific
glycans
or
development
of
unified
approaches
for
McMorrow
and
Professor
Michael
Ryan
have
with
particular
focus
on
CKD
arising
from
glycosylated.
With
many
glycans
or
development
of
unified
approaches
for
date
has
been
based
on
observational
or
case
researchers
in
histopathology
laboratories
supervised
approach
to
the
discrimination
their
application
of
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barrier dysfunction with innate and that it
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gastrointestinal
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Board.
Reference
Taylor.
pre-clinical
trial
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Reference
Common“Our
variants
at TRAF3IP2
aredata
associated
with
web-based
interface
for
high product
GlycoExtractor:
susceptibility
toApsoriatic
andPharma
psoriasis.
inform
the next
phasearthritis
Sigmoid
Reference:
processing
of
HPLC-Glycan
data
throughput
Hüffmeier
et al.
Nat Genet. 2010
Nov;42(11):996-9.
Reference:U cone
development
pipeline”.
Predominant
photoreceptor
dysfunction
in a
Bioinformatic analysis of HIV progression studies
Success in EU FP7 call
Conway
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