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Homework I. Mendelian genetics KEY (Sec 37) 1- An organism with genotype AaEEDd can make how many different gametes (list each one)? (1 pt) It could make 4 different types of gametes: AED, AEd, aED, aED. 2- You are studying tail length in squirrels and perform the standard genetic crosses. From the following observations, determine how this trait is inherited (which allele is dominant, and is the trait sex-linked?). Assume that parents are true breeding. Test your hypothesis with Chi-square. Show all your calculations for the Chi-square test. (2 pts) P: short tailed males x long tailed females F1: 145 long tailed males and 155 short tailed females (the F2 is the result of crossing a F1 male with a F1 females) F2: 73 long tailed females, 77 short tailed females, 72 long tailed males and 78 short tailed males. First, looking at the F1 you see that males and females are different; this observation ruled out the possibility of this is autosomal, then it is SEX-LINKED. Given the results in each cross and based on the predictions of Mendelian hypotheses, it can be hypothesized that Short tail is the dominant trait and it is sex-linked. For this particular parental cross and given the hypothesis, the expected phenotypic ratios in the F2 are 1 dominant female : 1 recessive female : 1 dominant male : 1 recessive male. Long tailed females Observed (O) 73 Expected (E) 75 Short tailed females Long tailed males 77 72 Short tailed males Total 78 300 (O-E) (O-E)2 X2 -2 4 4 / 75 = 0.053 75 75 2 -3 4 9 4 / 75 = 0.053 9 / 75 = 0.12 75 300 3 9 9 / 75 = 0.12 0.346 You have four phenotypes (long tailed females, long tailed males, short tailed females, and short tailed males), so your degrees of freedom are 4-1 = 3. The tabulated Chi-square for 3 degrees of freedom is equal to 7.815. Your calculated Chisquare is less than the theoretical value, which means that you hold your hypothesis (Short tail is a dominant and sex-linked trait) 3- You are analyzing a dihybrid cross where both mutant traits are autosomal dominant. You set up the parental cross with each true breeding parent possessing one wild type trait. You observed 96 mice in the F2 generation. What is the expected number of each F2 phenotypic group. (1 pts) Let’s define A = mutant trait 1, a = wild trait 1, B = mutant trait 2, and b = wild trait 2. For a dihybrid cross, the expected phenotypic ratio is 9 dominant-dominant : 3 dominant-recessive : 3 recessive-dominant : 1 recessive-recessive. Remember that to get the expected numbers of each phenotype, you have to divide your total observation (96 mice) by the total number of genotypes (16). The result of this division is multiplied by each of the expected proportions: 96 / 16 = 6, then: 9 x 6 = 54 mice A_B_ 3 x 6 = 18 mice A_bb 3 x 6 = 18 mice aaB_ 1 x 6 = 6 mice aabb 4- Both Mrs. Smith and Mrs. Jones had babies the same day in the same hospital. Mrs. Smith took home a bay girl, whom she named Sharon. Mrs. Jones took home a girl, whom she named Jane . Mrs. Jones began to suspect, however, that the child had been accidentally switched with Mrs. Smith baby in the nursery. Blood test were made; Mr. Smith was type A, Mrs. Smith was type B, Mr. Jones was type A, Mrs. Jones was type A. Sharon was type O, and Jane was type B. Had a mix-up occurred? Show your work! (1 pts) You know the phenotype of each parent but not their genotype. Then, Mr. Smith could be either IA IA or IA I, and the same thing for Mrs. Smith, Mr. Jones and Mrs. Jones. We are going to use the following notation: Mr. Smith IA __ Mrs. Smith IB __ Mr. Jones IA __ Mrs. Jones IA __ If you do the Punnett square, you will see that: The Smith baby could be: IA IB, IA i, IB i,or i i The Jones baby could be: IA IA, IA i, or i i Therefore, the parents of Jane can only be the Smith; there was a mix -up! 5- You are studying ONE trait that is autosomal recessive. You crossed the following true breeding parents: autosomal dominant female with an autosomal recessive male. What are the expected genotypic and phenotypic ratios in the F2 generation? (1 pt) Let’s define E = dominant and e = recessive. Parents are true breeding that means they are homozygous: P: EE x ee (as it is an autosomal trait, it does not matter which is female or male) e e E Ee Ee E Ee Ee Your F1 is 100% Ee that means all the progeny has the dominant phenotype. Now, to get the expected genotypic and phenotypic ratios in the F2, you breed the F1: E e E EE Ee e Ee ee Genotypic ratio = 1 EE : 2 Ee : 1 ee Phenotypic ratio = 3 dominant : 1 recessive 6- You have found a blue tomato growing in your garden and wa nt to find its genetic basis. You make a cross of a true breeding blue tomato plant with true breeding red tomato plant. Out of 1000 F2 plants you find that 712 are red, and 288 are blue. What is the likely genetic basis for the blue tomato (which trait is dominant?). Test your hypothesis with a Chi-square test. (2 pts) The red trait is most likely dominant, and this is probably a monohybrid cross. So, you have two phenotypic classes: red tomatoes and blue tomatoes. If this trait is inherited as expected by Mendel’s First Law, you expect to observe 750 red tomatoes and 250 blue ones in your F2. Red Blue Observed (O) 712 288 Expected (E) 750 250 Total 1000 1000 (O-E) -38 38 (O-E)2 1444 1444 X2 1.92 5.77 7.69 You have only 2 phenotypes, red (dominant) and blue (recessive), so the degrees of freedom are 2 -1 = 1. The tabulated Chi-square for 1 degree of freedom is equal to 3.841. Your calculated Chi-square is bigger than the theoretical value, which means that you reject your hypothesis (tomato color is not inherited as expected by first Mendel’s Laws).