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PANAGIOTIS PAPAPETROU
CONTACT INFORMATION
Helsinki Institute for Information Technology
Helsinki University of Technology (TKK)
Computer Science and Engineering Building, Room B333
Konemiehentie 2, Espoo, FI-02015 TKK, Finland
E-mail: [email protected]
URL: http://www.cis.hut.fi/panagpap
RESEARCH INTERESTS
Data Mining and Databases, Time Series Analysis, Machine Learning, Motion Mining, Sequential and
Temporal Pattern Mining, Data warehousing, Computational Biology, Bioinformatics.
EDUCATION
Jan 2004 – July 2009
Boston University
Boston, MA, USA
Ph.D., Computer Science.
Ph.D. Thesis Title: “Embedding-based Subsequence Matching in Large Sequence Databases”.
Advisor: George Kollios ([email protected]).
Jan 2004 – September 2006
Boston University
Boston, MA, USA
M.A., Computer Science.
M.A. Thesis Title: “Constraint-based Mining of Frequent Arrangements of Temporal Intervals”.
Advisor: George Kollios ([email protected]).
Sep 1999 – July 2003
University of Ioannina
Ioannina, Greece
B.A., Computer Science.
Graduated summa cum laude, GPA: 8.04/10.
B.A. Thesis Title: “Discovering Aggregate Usage Profiles Using Clustering Methods”.
Advisor: Dimitrios Fotiadis ([email protected]).
HONORS, AWARDS
Boston University
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Teaching Fellow Award for the year 2007-2008.
Teaching Fellow Award for the year 2004-2005.
2000 - 2003
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Boston, MA, USA
University of Ioannina
Ioannina, Greece
Greek National Foudnation (IKY) Award for Academic Excellence for the year 1999-2000.
Greek National Foudnation (IKY) Award for Academic Excellence for the year 2000-2001.
Greek National Foudnation (IKY) Award for Academic Excellence for the year 2001-2002.
TEACHING EXPERIENCE
2004 – Present
Boston University
Boston, MA, USA
Student Evaluations can be found online: http://cs-people.bu.edu/panagpap/evaluations.html.
Instructor for
CAS CS101 – Introduction to Computer Science: SUMMER I and SUMMER II 2008.
Teaching Fellow for
CAS CS101 – Introduction to Computer Science: SPRING 2004, SUMMER-FALL-SPRING 2007,
SPRING-FALL 2008.
CAS CS103 – Introduction to Web Computing: FALL 2005, SPRING 2006.
CAS CS330 – Analysis of Algorithms: SUMMER 2007.
CAS CS460 – Intoduction to Database Systems: SPRING 2007, SPRING 2008.
CAS CS411 – Software Engineering: FALL 2006.
PUBLICATIONS
JOURNALS
CONFERENCES
1. Panagiotis Papapetrou, George Kollios, Stan Sclaroff, and Dimitrios Gunopulos. “Mining
Frequent Arrangements of Temporal Intervals”. To Appear in Knowledge and Information
Systems (KAIS) .
2. Panagiotis Papapetrou, Vassilis Athitsos, George Kollios, and Dimitrios Gunopulos. "Referencebased Alignment in Large Sequence Databases". In Proc. of the International Conference
on Very Large Databases (VLDB), August 2009, Lyon, France.
3. Vassilis Athitsos, Panagiotis Papapetrou, Michalis Potamias, George Kollios, and Dimitrios
Gunopulos. "Approximate Embedding-Based Subsequence Matching of Time Series". In
Proc. of the ACM SIGMOD, June 2008, Vancouver, Canada.
4. Vassilis Athitsos, Michalis Potamias, Panagiotis Papapetrou, and George Kollios. "Nearest
Neighbor Retrieval Using Distance-Based Hashing". In Proc. of the IEEE International
Conference on Data Engineering (ICDE), April 2008, Cancun, Mexico.
5. Panagiotis Papapetrou, Gary Benson, and George Kollios. "Discovering Frequent PolyRegions in DNA Sequences". In Proc. of the IEEE International Conference on Data
Mining (ICDM) Workshop on Data Mining in Bioinformatics (DMB), Hong Kong,
December 2006.
6. Panagiotis Papapetrou, George Kollios, Stan Sclaroff, and Dimitrios Gunopulos. "Discovering
Frequent Arrangements of Temporal Intervals". In Proc. of thee 5th IEEE International
Conference on Data Mining (ICDM), New Orleans, Luisiana, USA, November 2005.
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TECHNICAL
REPORTS
7. Panagiotis Papapetrou, Gary Benson, and George Kollios. "Generalized Methods for
Discovering Frequent Poly-Regions in DNA Sequences".Technical Report, Department of
Computer Science, Boston University, October, 2008.
8. Ching Chang, Raymond Sweha, Panagiotis Papapetrou. "Extending snBench to Support a
Graphical “Programming” Interface for a Sensor Network Tasking Language (STEP) ".
Technical Report, Department of Computer Science, Boston University, July 2006.
CONFERENCE TALKS
1. "Reference-based Alignment in Large Sequence Databases". International Conference on
Very Large Databases (VLDB), Lyon, France August 2009.
2. "Discovering Frequent Poly-Regions in DNA Sequences". IEEE ICDM 2006 Workshop on
Data Mining in Bioinformatics (DMB), Hong Kong, December 2006.
3. "Discovering Frequent Arrangements of Temporal Intervals". IEEE International
Conference on Data Mining (IDCM), New Orleans, Luisiana, USA, November 2005.
PROFESSIONAL ACTIVITIES
Program Committee Member for
20th IEEE Conference on Scientific and Statistical Database Management (SSDBM) 2010.
Reviewer for
the TKDE Journal.
External Reviewer for
VLDB 2009, CIKM (2006, 2009), ICDM (2005, 2006), KDD (2006, 2008), DASFAA (2004).
Sep 2001 – Dec 2004
Unit of Medical Technology and Intelligent Information Systems
University of Ioannina
Ioannina, Greece
Project Developer
Developed WAP Applications for the Perfecture of Ioannina, Greece:
 Drugstores: a search-engine for pharmacies on duty in the city of Ioannina. WAP URL:
http://www.mobmed.cs.uoi.gr/drugstores.
 Medinfo: a search-engine for hospitals, doctors and clinics on duty in the city of Ioannina and
the Region of Epirus. WAP URL: http://www.mobmed.cs.uoi.gr/wtour.
Developed applications for PDAs
 WClinic: an application for online update of patients’ medical records in clinics and hospitals
during doctor examinations using Bluetooth technologies.
Developed and managed the database systems for the above applications (WAP and PDAs) under
ORACLE and DB2.
Participated in the authoring of proposals and project deliverables for the European Union
 Chldcare (IST – 2001 – 33383): The aim of CHILDCARE is to develop an Intelligent
Collaborative Healthcare Platform in order to improve the quality of homecare for children
affected by chronic diseases.
Deliverable: The CHILDCARE User Needs Analysis Report, Version: 2.0, 28 February 2002.
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
Lifebelt (IST – 2001 – 38165): The key objective of this project is the research, development
and validation of a wearable device (equipped with advenced biosensors) for the monitoring of
foetal and maternal health during oregnancy.
Deliverable: The LIFEBELT (IST – 2001 – 38165) Analysis of Existing Technologies and
Standards Report, D1.2 of WP1, January 2003.
COMPUTER SKILLS
Programming Languages: C, C++, PHP, Python. Java, Java Servlet, Javascript, SQL, HTML, WML.
Web Development Tools: Marcomedia Dreamweaver, Macromedia Flash.
Operating Systems: UNIX, Linux, Windows.
Software: Oracle SQL, DB2, MatLab, Microsoft Visual Studio .NET, Adobe Photoshop.
OTHER SKILLS
Languages:
 Greek (Native).
 English (Excellent): Proficiency in English (University of Cambridge, UK).
 German (Very Good): Kleines Deutches Sprachdiplom (University of Munich, Germany).
 Spanish (Elementary): Inicial (University of Salamanca, Spain).
Music: Church Organ (Very Good): Municipal of Ioannina, Greece.
E-MAIL PANAGIOTIS.PAPAPETROU@TK
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