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CHAPTER 33 Enterobacteriaceae The Enterobacteriaceae are a large and diverse family of Gram-negative rods, members of which are both free-living and part of the indigenous flora of humans and animals. A few are adapted strictly to humans. They are by far the most common cause of urinary tract infections (UTIs), and a limited number of species are also important etiologic agents of diarrhea. Spread to the bloodstream causes Gram-negative endotoxic shock, a dreaded and often fatal complication. GENERAL CHARACTERISTICS I. BACTERIOLOGY 1. Rods are large 2. Many have surface pili (fimbriae) 3. Antigenic components of the cell wall and surface are: O = LPS; K = polysaccharide capsule; H = flagellar protein 4. Facultative growth is rapid 5. Biochemical characteristics establish species 6. The genera containing the species most virulent for humans are Escherichia, Shigella, Salmonella, Klebsiella, and Yersinia 7. Antigenic characters define serotypes within species A. TOXINS 1. LPS endotoxin common to all Gram-negative bacteria is present in all 2. Some also produce protein exotoxins, which act on host cells by damaging membranes, inhibiting protein synthesis, or altering metabolic pathways. 3. Cytotoxins kill cells 4. Enterotoxins cause secretion and diarrhea II. DISEASES CAUSED BY ENTEROBACTERIACEAE A. EPIDEMIOLOGY 1. Present in nature and the intestinal tract 2. Shigella and Salmonella serotype Typhi are found only in humans B. PATHOGENESIS a. Opportunistic Infections 1. Colonization presents opportunity when defense barriers open 2. Urinary tract infection (UTI) follows access and adherence to bladder mucosa b. Intestinal Infections 1. Salmonella, Shigella, Yersinia enterocolitica, and certain strains of E. coli are able to produce disease in the intestinal tract 2. Cell destruction causes dysentery 3. Enterotoxins cause watery diarrhea 4. Enteric fever is a systemic illness c. Regulation of Virulence 1. Virulence factors respond to environment 2. Contact secretion systems inject virulence factors 3. Virulence genes are organized into gene clusters 4. Expression may be stimulated by environmental cues 5. Pathogenicity islands (PAIs) contain foreign DNA III. ENTEROBACTERIACEAE: CLINICAL ASPECTS A. MANIFESTATIONS 1. UTI and acute diarrhea are most common B. DIAGNOSIS 1. Culture is the primary method of diagnosis 2. MacConkey agar demonstrates lactose fermentation 3. Selective media required for Salmonella and Shigella in stools 4. Gene probes allow direct detection C. TREATMENT 1. Susceptibility to antimicrobials is highly variable ESCHERICHIA COLI I. BACTERIOLOGY 1. Most strains of E. coli ferment lactose rapidly and produce indole 2. Over 150 serotypes use O, H, K antigens A. PILI 1. Type 1 pili bind mannose 2. P pili bind uroepithelial cells 3. Pili of diarrhea strains bind enterocytes 4. Type 1 has on–off switch B. TOXINS 1. α-hemolysin is pore-forming cytotoxin 2. CNF disrupts intracellular signaling a. Shiga toxin (Stx) 1. AB toxin produced by Shigella and E. coli 2. Inhibits protein synthesis by ribosomal modification b. Labile toxin (LT) 1. AB toxin ADP-ribosylates G protein 2. Adenylate cyclase stimulation similar to cholera c. Stable toxin (ST) 1. ST stimulates guanylate cyclase II. E. coli OPPORTUNISTIC INFECTIONS A. URINARY TRACT INFECTION (UTI) a. Epidemiology 1. E. coli accounts for more than 90% of the more than 7 million US cases of cystitis and 250,000 of pyelonephritis 2. Perineal flora is reservoir of common cystitis b. Pathogenesis 1. Minor trauma admits E. coli to the bladder 2. Uropathic E. coli (UPEC) serotypes cause most UTIs 3. Type 1 pili adhere to periurethral and bladder cells 4. The presence of P pili adds an additional component due to the presence of their Gal-Gal receptor on uroepithelial cells. 5. P pili prominent in pyelonephritis B. OTHER OPPORTUNISTIC INFECTIONS 1. 2. 3. 4. 5. E. coli is one of the most common causes of neonatal meningitis Infection from vaginal flora much like group B streptococcal disease K1 capsule identical to meningococcus Non-UTI infections require some breach of defenses May follow mechanical damage such as a ruptured intestinal diverticulum, trauma, or involve a generalized impairment of immune function III. E. coli INTESTINAL INFECTIONS A. ENTEROTOXIGENIC E. coli (ETEC) a. Epidemiology 1. Traveler’s diarrhea affects children of developing countries 2. High dose in uncooked foods required b. Pathogenesis 1. LT and/or ST cause fluid outpouring in small intestine 2. Colonizing factor (CF pili) is required c. Immunity onimmunogenic1. sIgA to LT and CFs may provide some protection B. ENTEROPATHOGENIC E. Coli (EPEC) a. Epidemiology 1. Nursery outbreaks and endemic diarrheas occur in developing world 2. In developing countries EPEC account for up to 20% of diarrhea in bottle-fed infants younger than 1 year of age b. Pathogenesis 1. EPEC initially attach to small intestine enterocytes using Bfp pili to form clustered micro-colonies on the enterocyte cell surface 2. Intimin receptor and E. coli secretion proteins Esps are injected 3. Cytoskeleton modification produces attachment and effacing (A/E) lesion C. ENTEROHEMORRHAGIC E. coli (EHEC) a. Epidemiology 1. Consumption of contaminated animal products is the main source 2. EHEC disease has emerged as an important cause of bloody diarrhea in industrialized nations 3. Bloody diarrhea and hemolytic uremic syndrome (HUS) linked to O157:H7 4. Low infecting dose facilitates transmission 5. Modern meat processing facilitates widespread outbreaks 6. Unpasteurized beverages are another risk b. Pathogenesis 1. Produce both Stx and A/E lesions 2. Lesions are in colon 3. Stx causes capillary thrombosis and inflammation 4. Circulating Stx leads to HUS D. ENTEROINVASIVE E. coli (EIEC) 1. EIEC closely resemble Shigella 2. Documented outbreaks in industrialized nations are usually linked to contaminated food or water E. ENTEROAGGREGATIVE E. coli (EAEC) 1. Protracted (>14 days) watery diarrhea occasionally with blood and mucus 2. EAEC strains are defined on the basis of the pattern the bacteria make (stackedbrick) when adhering to cultured mammalian cells 3. Adherence and biofilm cause diarrhea IV. E. coli INFECTIONS: CLINICAL ASPECTS A. MANIFESTATIONS a. Opportunistic Infections 1. Dysuria and frequency are features of UTIs 2. If the infection ascends the ureters to produce pyelonephritis, fever and flank pain are added and bacteremia may develop 3. No clinical features distinguish these cases from those caused by other members of the Enterobacteriaceae b. Intestinal Infections 1. Infections caused by all of the E. coli virulence types usually begin with a mild watery diarrhea starting 2 to 4 days after ingestion of an infectious dose 2. ETEC and EPEC diarrhea is watery 3. EHEC diarrhea is bloody 4. HUS begins as oliguria and may progress to renal failure B. DIAGNOSIS 1. 2. 3. 4. Like the rest of the Enterobacteriaceae, E. coli is readily isolated in culture Numbers in urine are high (>105) in quantitative culture Diarrhea requires immunoassay or gene probe Sorbitol agar screens for O157:H7 C. TREATMENT 1. Resistance influences antimicrobial selection 2. Most E. coli diarrheas are mild and self-limiting 3. Antimicrobics may help all but EHEC D. PREVENTION 1. Avoid uncooked foods in regions with poor sanitation 2. Chemoprophylaxis for travelers’ diarrhea works for defined periods 3. Recommendations for the irradiation of meats and the extension of pasteurization requirements to fruit juices are largely designed to stem the spread of EHEC. 4. Rare hamburgers carry risk for EHEC SHIGELLA I. BACTERIOLOGY 1. O antigens and biochemicals define four species Shigella dysenteriae (serogroup A), Shigella flexneri (serogroup B), Shigella boydii (serogroup C), and Shigella sonnei (serogroup D) 2. All but S. sonnei are further subdivided into a total of 38 individual O antigen serotypes specified by numbers 3. Invasiveness and Stx production are virulence factors II. SHIGELLOSIS A. EPIDEMIOLOGY 1. Strictly human disease 2. Low infecting dose facilitates fecal–oral spread person-to-person 3. Personal and community sanitary practices determine incidence 4. Wars and natural disasters create outbreaks B. PATHOGENESIS 1. Bacteria pass stomach acid and invade colon 2. Transcytose M cells to macrophages 3. Invade enterocytes from dead macrophages 4. Injected invasion plasmid antigens (IpaA, IpaB, IpaC) induce endocytosis 5. Escape phagosome to cytoplasm 6. Polymerization of cytoskeletal actin propels bacteria through cytoplasm 7. Microtubules are digested 8. Adjacent enterocytes are invaded directly 9. Double-membrane lysis restarts process in new cell 10 Enterocyte invasion creates ulcers in colonic mucosa 11. Diarrhea + WBCs + RBCs = dysentery 12. Stx increases severity of disease 13. Large plasmid containing Ipa genes is required for virulence III. SHIGELLOSIS: CLINICAL ASPECTS A. MANIFESTATIONS 1. Watery diarrhea is followed by fever, bloody mucoid stools, and cramping 2. Mortality significant with S. dysenteriae type 1 3. Most infections are self-limiting B. DIAGNOSIS 1. Selective media are routinely used in clinical laboratory stool cultures 2. O antigen agglutination tests confirm species C. TREATMENT 1. TMP-SMX, fluoroquinolones, ceftriaxone, azithromycin, or nalidixic acid treatment shortens illness and excretion 2. Ampicillin resistance is common PREVENTION 1. Sanitation, insect control, handwashing, and cooking block transmission 2. Live attenuated vaccines are under investigation Salmonella I. BACTERIOLOGY 1. Complexity of O, K, and H antigens leads to many serotypes 2. Historic species names persist as serotypes of S. enterica 3. Salmonella species vary in preferred host 4. S. enterica serovar Typhi infects only humans 5. Type 1 pili and flagella present II. SALMONELLA GASTROENTERITIS (S. enterica) A. EPIDEMIOLOGY 1. Improper food handling allows the transmission from the animal reservoir to humans 2. Infecting dose is much higher than Shigella making person-to-person spread unlikely 3. Bacteria increase their numbers by growth in contaminated foods prior to ingestion 4. Poultry products are common source 5. Outbreaks in institutions are common 6. Human carriers can be a source 7. Modern delivery systems can spread disease efficiently in multistate outbreaks B. PATHOGENESIS 1. Adherence to enterocyte triggers surface “ruffles” 2. Secretion system genes are in PAIs 3. Ruffles induce endocytosis 4. Bacteria progress through cell to lamina propria 5. Macrophage apoptosis aids survival in submucosa 6. Enterotoxin role is unclear 7. Invasion and inflammation cause diarrhea III. ENTERIC (TYPHOID) FEVER (Salmonella serovar Typhi) A. EPIDEMIOLOGY 1. Cases are always traceable to a human source 2. Fecal–oral transmission requires moderate dose 3. Prevalence is linked to sanitary infrastructure B. PATHOGENESIS 1. Typhi invades M cells and macrophages 2. Vi surface polysaccharide limits PMN phagocytosis 3. Macrophage oxidative burst inhibited 4. Infection spreads through reticuloendothelial system (RES) 5. RES sites seed the bloodstream and other organs 6. Endotoxin produces the fever of typhoid C. IMMUNITY 1. TH1 and TH2 mediated immunity follows natural infection IV. SALMONELLOSIS: CLINICAL ASPECTS A. MANIFESTATIONS a. Gastroenteritis 1. S. enterica = gastroenteritis 2. Diarrhea, vomiting, and cramps are common b. Bacteremia and Metastatic Infection 1. Bacteremia is most common and severe in immunocompromised 2. Metastatic sites linked to previous injury particularly sickle-cell c. Enteric Fever – S. Typhi = enteric fever 1. Multiorgan system infection characterized by prolonged fever, sustained bacteremia, and involvement of lymph nodes, liver, and spleen 2. Slowly increasing fever lasts for weeks 3. Diarrhea is intermittent or absent 4. Bacteremia leads to biliary tree infection which in turn reseeds intestine 5. Urinary tract, bone, and joints are metastatic sites B. DIAGNOSIS 1. Stool and blood culture are routine 2. Early in the course of enteric fever, blood is far more likely to give a positive culture result than culture from any other site including stool 3. Typhi has characteristic bacteriologic features C. TREATMENT 1. The primary therapeutic approach to Salmonella gastroenteritis is fluid and electrolyte replacement and the control of nausea and vomiting 2. Antimicrobics are of limited use in gastroenteritis 3. In typhoid fever antibiotics are effective but resistance is common D. PREVENTION 1. Typhoid vaccines are only moderately effective 2. Sanitation and public health measures can eliminate Typhi YERSINIA I. BACTERIOLOGY 1. Coccobacillary and grow at variable temperatures 2. Human pathogens linked to animals II. YERSINIA DISEASES (Y. pseudotuberculosis and Y. enterocolitica) A. EPIDEMIOLOGY 1. Transmitted by ingestion from animal source 2. Geographic variation is great B. PATHOGENESIS 1. Intestinal M cells are invaded 2. Injected major effector proteins called Yops disrupt cellular function 3. Ca2+ and temperature regulate virulence factor expression 4. Plasmid and PAI contain virulence genes 5. Spread leads to microabscesses in lymph nodes 6. Y. pestis reaches the dermal lymphatics by the bite of an infected flea 7. Y. pestis has capsule, plasminogen activator, and fibrinolysin III. YERSINIA INFECTIONS: CLINICAL ASPECTS 1. Mesenteric lymphadenitis creates abdominal pain 2. Yersinia are not routinely sought in stool cultures 3. Antimicrobics have variable effect OTHER ENTEROBACTERIACEAE I. KLEBSIELLA 1. Polysaccharide capsule blocks complement deposition 2. Klebsiella species are now among the most resistant to antimicrobics. II. ENTEROBACTER 1. Modest virulence but are linked to hospital contamination III. SERRATIA 1. Red pigment (in culture) and multiresistance are characteristic IV. CITROBACTER 1. Uncommon cause of opportunistic infection and brain abscess I. PROTEUS, PROVIDENCIA, AND MORGANELLA 1. Swarming over agar plates is a feature of some species 2. Urease production is linked to urinary stones