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Chromosomal rearrangements and protein globularity changes in
Chromosomal rearrangements and protein globularity changes in

An assessment of factors affecting the likelihood
An assessment of factors affecting the likelihood

... that competent bacteria are exposed to plant transgenes to the same extent as to other plant DNA. Although positive results have been obtained in vitro, the ability of bacteria to take up plant DNA that is naturally released in situ e.g. in soil or in planta, has not been shown. Information on the ...
The Genetics of Spinal Muscular Atrophy
The Genetics of Spinal Muscular Atrophy

... nucleotide thymine (T), while cytosine (C) always pairs with guanine (G). This schema was taken from www. biotechnologyonline.gov.au/biotec/ dnalook/cfm ...
Sequence variation in the dihydrofolate reductase
Sequence variation in the dihydrofolate reductase

Consistent Errors in First Strand cDNA Due to Random Hexamer
Consistent Errors in First Strand cDNA Due to Random Hexamer

Identifying Unknown Bacteria Using Biochemical
Identifying Unknown Bacteria Using Biochemical

... step. These tubes were developed for clinical use to identify bacteria. They contain thirteen compartments, each with a different type of media, which will test for the presence of a different enzyme or set of enzymes in the unknown bacteria. Students innoculate the compartments with their unknown b ...
Dynamic changes of yak (Bos grunniens) gut microbiota during
Dynamic changes of yak (Bos grunniens) gut microbiota during

Aislamiento in vitro e intensidad de infección de Rickettsia parkeri
Aislamiento in vitro e intensidad de infección de Rickettsia parkeri

... new isolates were achieved from A. triste ticks collected in a region where cases of human R. parkeri-rickettsiosis were confirmed. Previously, Nava et al. (2008) reported R. parkeri infecting 8.4% of the A. triste ticks collected from the vegetation in the Paraná River Delta. In the present study, ...
Part II—What Is the Evidence that Nanobacteria Are Alive?
Part II—What Is the Evidence that Nanobacteria Are Alive?

... results by other scientists. If others can repeat your work, then it is likely (although not guaranteed) that your conclusions and hypotheses are correct. In October of 2000, Cisar et al. (et al. means "and others") published a paper (PNAS 97:11511-11515; 2000) that examined the original work of Kaj ...
exon junctions of Euglena gene(s) - DigitalCommons@University of
exon junctions of Euglena gene(s) - DigitalCommons@University of

... (11) using a 5' primer corresponding to the conserved 26 nt added to the 5' end of all Euglena mRNAs by transsplicing (13), and two nested 3' primers (Coni and Con2, Fig. 2) corresponding to a highly conserved sequence in the C-terminal region of Euglena LHCPII (4). The NLH1 sequence was completely ...
Functional tests of enhancer conservation between
Functional tests of enhancer conservation between

... Expression patterns of orthologous genes are often conserved, even between distantly related organisms, suggesting that once established, developmental programs can be stably maintained over long periods of evolutionary time. Because many orthologous transcription factors are also functionally conse ...
Case No COMP/M.5264 - INVITROGEN / APPLIED BIOSYSTEMS
Case No COMP/M.5264 - INVITROGEN / APPLIED BIOSYSTEMS

Divergent Evolution and Evolution by the Birth-and
Divergent Evolution and Evolution by the Birth-and

... for our study of long-term evolution was 57, and they are listed in table 1. We used the germ-line sequences whenever possible, to avoid the effect of somatic mutation ( Tonegawa 1983 ) . In a few species, however, we used cDNA, because germ-line genes were not available and sequence divergences wer ...
mutations
mutations

... Harmful and Helpful Mutations The effects of mutations on genes vary widely. Some have little or no effect; and some produce beneficial variations. Some negatively disrupt gene function. Whether a mutation is negative or beneficial depends on how its DNA changes relative to the organism’s situation. ...
Gene families and evolution of trehalose
Gene families and evolution of trehalose

module 5: translation - GEP Community Server
module 5: translation - GEP Community Server

... looking at the genome. You saw an example of this previously in Module 1. Sometimes we can infer the correct reading frame given the pattern of start and stop codons within the region of the exon, identified by RNA-Seq data. But that sort of information does not always give a definitive answer – the ...
GST II: ---Title--- - Digital Biology Laboratory
GST II: ---Title--- - Digital Biology Laboratory

... The maximum scores of a large number of alignments between random sequences of equal length tends to have an extreme value distribution P(S’=x)= 1- exp[-exp(-x)] ...
Opposite deletions/duplications of the X chromosome: two
Opposite deletions/duplications of the X chromosome: two

... factor VIII, of the IDS gene and of the FLN1/emerin region, all resulting from misalignment of inverted repeats, and double recombination. Most of these inversions are of paternal origin possibly because the X chromosome at male meiosis is free to refold into itself for most of its length. We report ...
WebMOTIFS: Web-based integrated motif discovery
WebMOTIFS: Web-based integrated motif discovery

... mode, the Bayesian motif discovery program THEME is also used to find motifs consistent with particular DNA-binding domain families. THEME includes its own principled scoring algorithms, eliminating the need for post-processing. The motifs discovered using ChIP-chip data for Fkh2 in high-H2O2 condit ...
Figure 5 - GEP Community Server
Figure 5 - GEP Community Server

... looking at the genome. You saw an example of this previously in Module 1. Sometimes we can infer the correct reading frame given the pattern of start and stop codons within the region of the exon, identified by RNA-Seq data. But that sort of information does not always give a definitive answer – the ...
The coiled-coil of the human Rad50 DNA repair protein contains
The coiled-coil of the human Rad50 DNA repair protein contains

... he protein complex containing Rad50 and Mre11 (R兾M) plays a pivotal role in maintaining genome stability. Its vital importance is underscored by its conservation from bacteriophages to humans (1). Based on amino acid sequence similarities, Rad50 belongs to the structural maintenance of chromosomes ( ...
RNA-Seq analysis
RNA-Seq analysis

Biomart/ GENOME ALIGNMENT III
Biomart/ GENOME ALIGNMENT III

... The comparison of the mouse and human genomes has demonstrated the power of comparative genomics in inferring the evolutionary history of species and in identifying functional regions in genomes. The possibilities for identifying regions under selection are enhanced with the addition of more sequenc ...
Comparative sequence analysis of the long repeat regions and
Comparative sequence analysis of the long repeat regions and

Graph-based Methods for the Design of DNA - TUBdok
Graph-based Methods for the Design of DNA - TUBdok

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Non-coding DNA

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