Analysis of the Molecular Basis of Flowering Time Variation in
... to the flowering time variation in Shakhdara, Kz-9, and Kondara. To date, the most well-characterized FLC alleles are from the Ler and Col accessions (Koornneef et al., 1994; Lee et al., 1994; Sanda and Amasino, 1996). The Ler FLC allele has been described as a weak allele as when combined with acti ...
... to the flowering time variation in Shakhdara, Kz-9, and Kondara. To date, the most well-characterized FLC alleles are from the Ler and Col accessions (Koornneef et al., 1994; Lee et al., 1994; Sanda and Amasino, 1996). The Ler FLC allele has been described as a weak allele as when combined with acti ...
Additional file 1
... 1、 The protein sequence of bh2b may be queried against transcription factor database of Jaspar[3] with blastp to gather information on likely DNA binding sites of bh2b, which is based on the PWMs of transcription factors that are similar to bh2b. The blastp result shows that bh2b is similar with tra ...
... 1、 The protein sequence of bh2b may be queried against transcription factor database of Jaspar[3] with blastp to gather information on likely DNA binding sites of bh2b, which is based on the PWMs of transcription factors that are similar to bh2b. The blastp result shows that bh2b is similar with tra ...
SALSA MLPA probemix P222-A2 LCA mix-2 - MRC
... polymorphism in the sequence detected by a probe can also cause a reduction in relative peak area, even when not located exactly on the ligation site! In addition, some probe signals are more sensitive to sample purity and small changes in experimental conditions. Therefore, deletions and duplicatio ...
... polymorphism in the sequence detected by a probe can also cause a reduction in relative peak area, even when not located exactly on the ligation site! In addition, some probe signals are more sensitive to sample purity and small changes in experimental conditions. Therefore, deletions and duplicatio ...
NO sensing by FNR: regulation of the Escherichia coli NO
... the ¯avohaemoglobin-encoding gene of E.coli, hmp, is upregulated by NO and RNS; this appears not to involve SoxRS (Poole et al., 1996). We have reported (MembrilloHernaÂndez et al., 1998) a mechanism of hmp gene regulation that involves interaction between S-nitrosothiols and Hcy. Intracellular Hcy ...
... the ¯avohaemoglobin-encoding gene of E.coli, hmp, is upregulated by NO and RNS; this appears not to involve SoxRS (Poole et al., 1996). We have reported (MembrilloHernaÂndez et al., 1998) a mechanism of hmp gene regulation that involves interaction between S-nitrosothiols and Hcy. Intracellular Hcy ...
Thesis-1965R-K29r
... attempt to obtain information on the structure, composition and function of the nucleolus. Information on the possible connections of the nucleolus with the mitotic cycle and cytoplasm was also obtained. Pub I ications since the year 1959 were consulted. The materials used were chiefly periodicals a ...
... attempt to obtain information on the structure, composition and function of the nucleolus. Information on the possible connections of the nucleolus with the mitotic cycle and cytoplasm was also obtained. Pub I ications since the year 1959 were consulted. The materials used were chiefly periodicals a ...
Identification and expression of GH
... and methods’). The sequence of the PCR product revealed a putative ORF sequence (1359 bp) with 95% identity to the ORFs of Bacillus sp. No. 7-M (Izume et al., 1992) and KCTC 0377BP (Choi et al., 2004), which are classed as GH-8 chitosanases. Based on this result, two further primers (BTMO-F and BTMO ...
... and methods’). The sequence of the PCR product revealed a putative ORF sequence (1359 bp) with 95% identity to the ORFs of Bacillus sp. No. 7-M (Izume et al., 1992) and KCTC 0377BP (Choi et al., 2004), which are classed as GH-8 chitosanases. Based on this result, two further primers (BTMO-F and BTMO ...
Integrated mapping and characterization of the gene underlying the
... have originated from relatively recent interspecific hybridization events between an A-genome-like ancestral species similar to modern G. arboreum or G. herbaceum and a D-genome-like species similar to modern Gossypium raimondii (D5; Wendel and Cronn, 2003). The leaf shape of most of the G. hirsut ...
... have originated from relatively recent interspecific hybridization events between an A-genome-like ancestral species similar to modern G. arboreum or G. herbaceum and a D-genome-like species similar to modern Gossypium raimondii (D5; Wendel and Cronn, 2003). The leaf shape of most of the G. hirsut ...
- UEA Digital Repository
... This copy of the thesis has been supplied on condition that anyone who consults it is understood to recognise that its copyright rests with the author and that use of any information derived there from must be in accordance with current UK Copyright Law. In addition, any quotation or extract must in ...
... This copy of the thesis has been supplied on condition that anyone who consults it is understood to recognise that its copyright rests with the author and that use of any information derived there from must be in accordance with current UK Copyright Law. In addition, any quotation or extract must in ...
SALSA MLPA probemix P018-F1 SHOX - MRC
... This P018-F1 SHOX probemix contains probes for each exon of the human SHOX gene, as well as a probe just before the SHOX promoter region. In addition, several probes are present detecting sequences in a region downstream of SHOX which has been implicated in regulation of SHOX transcription. Furtherm ...
... This P018-F1 SHOX probemix contains probes for each exon of the human SHOX gene, as well as a probe just before the SHOX promoter region. In addition, several probes are present detecting sequences in a region downstream of SHOX which has been implicated in regulation of SHOX transcription. Furtherm ...
Array-based sequencing of filaggrin gene for
... Visual inspection of identified null-mutations was performed using the Integrated Genome Viewer (Broad Institute; Figure 1E) (Robinson et al. 2011). In an optional pipeline step, the coordinates of identified variants can also be converted to the FLG gene 10-repeat reference sequence that is found i ...
... Visual inspection of identified null-mutations was performed using the Integrated Genome Viewer (Broad Institute; Figure 1E) (Robinson et al. 2011). In an optional pipeline step, the coordinates of identified variants can also be converted to the FLG gene 10-repeat reference sequence that is found i ...
TaqMan-Based Real-Time PCR for Genotyping Common
... reported, one of which, HP Johnson, occurs at low frequency in various populations (3 ). The molecular weight of the ␣ chain is larger (23 kDa) than that encoded by HP2, and Southern blotting has shown 3 tandem repeats of the same 1.7-kb DNA segment found in the HP2 gene duplication (4 ). Another va ...
... reported, one of which, HP Johnson, occurs at low frequency in various populations (3 ). The molecular weight of the ␣ chain is larger (23 kDa) than that encoded by HP2, and Southern blotting has shown 3 tandem repeats of the same 1.7-kb DNA segment found in the HP2 gene duplication (4 ). Another va ...
Wolbachia–host interactions: connecting phenotype to genotype
... The comparative value of these genomic data is being enhanced as whole genome sequences of closely related pathogens that don’t cause any of the same phenotypes as Wolbachia, such as several species of Rickettsia [31–33], Anaplasma marginale [34] and Ehrlichia rumiantium [35], are becoming available ...
... The comparative value of these genomic data is being enhanced as whole genome sequences of closely related pathogens that don’t cause any of the same phenotypes as Wolbachia, such as several species of Rickettsia [31–33], Anaplasma marginale [34] and Ehrlichia rumiantium [35], are becoming available ...
Transvection Is Common Throughout the Drosophila
... larval ventral nervous system. (A) Schematic of a CRMGAL4 transgene inserted into an attP site. Red-shaded boxes indicate sequences that originate from the attBcontaining CRM-GAL4 vector. Yellow-shaded boxes indicate sequences from the attP-containing P-element. Gray boxes indicate the surrounding g ...
... larval ventral nervous system. (A) Schematic of a CRMGAL4 transgene inserted into an attP site. Red-shaded boxes indicate sequences that originate from the attBcontaining CRM-GAL4 vector. Yellow-shaded boxes indicate sequences from the attP-containing P-element. Gray boxes indicate the surrounding g ...
RNA Editing, ADAR1, and the Innate Immune Response
... illustrations for understanding the biological consequences of RNA editing. For example, the editing of the Q/R site in GluR-B mRNA by ADAR2 [24] dramatically changes the permeability of the ion channel of the AMP receptor. A-to-I RNA editing also modifies microRNA precursors and therefore impacts t ...
... illustrations for understanding the biological consequences of RNA editing. For example, the editing of the Q/R site in GluR-B mRNA by ADAR2 [24] dramatically changes the permeability of the ion channel of the AMP receptor. A-to-I RNA editing also modifies microRNA precursors and therefore impacts t ...
Searching for Compact Hierarchical Structures in DNA by means of
... The exponential growth of available DNA sequences in recent years is having a fruitful clash with the deep questions underlying information science. Brooks identified in 2003 recent development in biology as the necessary pressure to finally develop a long-time needed quantification of structural infor ...
... The exponential growth of available DNA sequences in recent years is having a fruitful clash with the deep questions underlying information science. Brooks identified in 2003 recent development in biology as the necessary pressure to finally develop a long-time needed quantification of structural infor ...
The amelogenin gene
... Mapping of human amelogenin gene loci on the X- and V-chromosomes Lau et al. (1989) mapped human amelogenin genes on the short arm of the X-chromosome in the p22.1-p22.3 region and in the peri centric region of the V-chromosome. The amelogenin sequence on the human V-chromosome was tentatively mappe ...
... Mapping of human amelogenin gene loci on the X- and V-chromosomes Lau et al. (1989) mapped human amelogenin genes on the short arm of the X-chromosome in the p22.1-p22.3 region and in the peri centric region of the V-chromosome. The amelogenin sequence on the human V-chromosome was tentatively mappe ...
The SRA gen - uri=dna.kdna.ucla
... in ETat 1.2CR was linked to the appearance of a third HindIII fragment, which migrated as a smear (Figure 2B, third lane of first panel and third panel, arrowhead) but was more clearly evidenced by the doubling of the hybridization intensity of the 1 kb HindIII-HpaI fragment. This smear is typical o ...
... in ETat 1.2CR was linked to the appearance of a third HindIII fragment, which migrated as a smear (Figure 2B, third lane of first panel and third panel, arrowhead) but was more clearly evidenced by the doubling of the hybridization intensity of the 1 kb HindIII-HpaI fragment. This smear is typical o ...
Emended description of the order Chlamydiales, proposal of
... The current taxonomic classification of Chlamydia is based on limited phenotypic, morphologic and genetic criteria. This classification does not take into account recent analysis of the ribosomal operon or recently identified obligately intracellular organisms that have a chlamydia-like developmenta ...
... The current taxonomic classification of Chlamydia is based on limited phenotypic, morphologic and genetic criteria. This classification does not take into account recent analysis of the ribosomal operon or recently identified obligately intracellular organisms that have a chlamydia-like developmenta ...
Intellectual property rights and innovation: Evidence from
... Empirical study of this question has traditionally been hampered by concerns that the presence of IP may be correlated with factors such as the expected commercial potential of a given discovery.2 The contribution of this paper is to identify an empirical context in which there is variation in IP ac ...
... Empirical study of this question has traditionally been hampered by concerns that the presence of IP may be correlated with factors such as the expected commercial potential of a given discovery.2 The contribution of this paper is to identify an empirical context in which there is variation in IP ac ...
Document
... your knowledge of biology. When a culture of cells is exposed to gamma rays, chromosome damage results. This damage is very evident when the cells are stained and observed with a compound light microscope. The chromosome damage is primarily in the form of breaks and gaps, which are commonly referred ...
... your knowledge of biology. When a culture of cells is exposed to gamma rays, chromosome damage results. This damage is very evident when the cells are stained and observed with a compound light microscope. The chromosome damage is primarily in the form of breaks and gaps, which are commonly referred ...
6.
... Which exons are functional? We detected a conserved mouse exon for 25% of the human cassette exons in our set. These CAS exons most probably have functional importance. In principle, some of the 75% human non-CAS exons could also be functional; however, these might be expected to have similar charac ...
... Which exons are functional? We detected a conserved mouse exon for 25% of the human cassette exons in our set. These CAS exons most probably have functional importance. In principle, some of the 75% human non-CAS exons could also be functional; however, these might be expected to have similar charac ...
Analyzing Amino-Acid Sequences
... The biochemical comparison of proteins is a technique used to determine evolutionary relationships among organisms. Proteins consist of chains of amino acids. The sequence, or order, of the amino acids in a protein determines the type and nature of the protein. In turn, the sequence of amino acids i ...
... The biochemical comparison of proteins is a technique used to determine evolutionary relationships among organisms. Proteins consist of chains of amino acids. The sequence, or order, of the amino acids in a protein determines the type and nature of the protein. In turn, the sequence of amino acids i ...
Comparative genomics of unintrogressed Campylobacter coli clades 2 and 3
... Also, in silico analysis of the gene content revealed that C. coli clades 2 and 3 have genes associated with infection, suggesting they are a potent human pathogen, and may currently be underreported in human infections due to niche separation. Keywords: Campylobacter coli, Comparative genomics, Phy ...
... Also, in silico analysis of the gene content revealed that C. coli clades 2 and 3 have genes associated with infection, suggesting they are a potent human pathogen, and may currently be underreported in human infections due to niche separation. Keywords: Campylobacter coli, Comparative genomics, Phy ...
Autotrophic CO2 fixation via the reductive tricarboxylic acid cycle in
... inorganic carbon as the source for cell carbon – are likely to have been among the first types of organisms on Earth (e.g. Huber and Wächtershäuser, 1997; Russell and Hall, 1997). Phylogenetic analyses based on 16S rRNA and whole genomes place autotrophic hyperthermophiles at the base of the evoluti ...
... inorganic carbon as the source for cell carbon – are likely to have been among the first types of organisms on Earth (e.g. Huber and Wächtershäuser, 1997; Russell and Hall, 1997). Phylogenetic analyses based on 16S rRNA and whole genomes place autotrophic hyperthermophiles at the base of the evoluti ...