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A Complete Mitochondrial Genome Sequence
A Complete Mitochondrial Genome Sequence

... Summary of Illumina Genome Analyzer Sequencing and mtDNA Sequence Assembly A total of 49,125,583 Illumina Genome Analyzer (GA) single sequence reads, each 36 nucleotides in length, were produced from three independently prepared CPC98 Illumina GA libraries and sequenced across 14 lanes of three flow ...
Full Text
Full Text

... binding activity moderately, for example, the Lys568 mutant decreased the binding affinity approx. 8-fold [27]. Although these residues were shown to make contact with telomeric DNA, the role of these residues on telomere binding in vivo is not clear. Telomere binding appears to be important for its ...
Human, yeast and hybrid 3-phosphoglycerate kinase gene
Human, yeast and hybrid 3-phosphoglycerate kinase gene

... Nucleic Acids Research essentially identical at 10 percent of the cell protein. By comparison with expression unit b, protein levels of all hPGK containing expression units are significantly decreased. Differences in migration of the various PGKs are due to differences in amino acid compositions (1 ...
Plant and Soil
Plant and Soil

... Marker genes used in competition studies The main advantage of using introduced marker genes is that the assay for the presence of the marker is simpler than that of other methods. Most reporter genes used in ecological studies allow detection of the marked organism by eye, because the marker gene e ...
Evolutionary Origin and Adaptive Function of Meiosis
Evolutionary Origin and Adaptive Function of Meiosis

... the nature of the internalized aerobe, and then on its anaerobic host. On the basis of genome sequence analysis, extant mitochondria are most closely related to αproteobacteria, suggesting that mitochondria are descended from an α-proteobacterium (Gray et al., 1999; Muller and Martin, 1999). Based o ...
#2
#2

... human and chimpanzee, we aligned 14.3 Mb of orthologous noncoding DNA sequences from human, chimpanzee, and baboon (Methods). Subsequently, human chromosomes were split into 1 Mb non-overlapping windows (referred to as loci). We retained 36 loci dispersed over 12 autosomal chromosomes, each of which ...
Does Speciation between Arabidopsis halleri and
Does Speciation between Arabidopsis halleri and

... haplotype sharing among species provides support for the former hypothesis (data not shown). Using model choice procedures under an ABC framework, we could clearly reject scenarios with ongoing migration (Fig. 3, see also Text S1 for an account of the tests on the robustness of this result). Both mo ...
Cloning and Genetic Analysis of Six Pyrroloquinoline
Cloning and Genetic Analysis of Six Pyrroloquinoline

... were killed by EMS. In preliminary experiments the mutagenized cells were used to inoculate separate small cultures, with the aim of isolating a single mutant strain from each culture, so as to obtain independent mutations. However, the PQQ- mutants obtained by this method were all affected in pqqA, ...
Word document - Personal Genetics Education Project
Word document - Personal Genetics Education Project

... about their traits such as their genetic predisposition for various diseases. Your DNA can reveal important information about your traits. It is important to remember that your physical, mental and behavioral states are the result of complex interactions between multiple genes in combination with yo ...
How might new advances in personal genetics impact our lives, our
How might new advances in personal genetics impact our lives, our

... the DNA analysis; this often includes genetic predictions about their traits such as their genetic predisposition for various diseases. Your DNA can reveal important information about your traits. It is important to remember that your physical, mental and behavioral states are the result of complex ...
Isolation and characterization of a repeated sequence (RPS1) of
Isolation and characterization of a repeated sequence (RPS1) of

... were virtually identical; however, one or two chromosomes were variable in size (Asakura et al., 1991). In virtually all cases, the chromosome that varied in size was chromosome 2. This suggested that chromosome 2 is too variable to be useful for distinguishing between strains. A similar variable ch ...
cis-Regulatory Elements and Chromatin State
cis-Regulatory Elements and Chromatin State

... conserved sequence stretches within block A of the Aa FT2 and Aa FT3 genes and in the promoter sequence of A. thaliana TSF (Figure 1C). These putative cis-regulatory elements did not contain documented transcription factor binding sites and were therefore called shadow 1, 2, 3, and 4 (S1 to S4). Fur ...
OGT review 6 - HensonsBiologyPage
OGT review 6 - HensonsBiologyPage

... Fatty acids are the building blocks of lipids. A fatty acid is a chain of carbons with hydrogen attached to each side. • Fatty acids that are full of hydrogen are “saturated” – these are the unhealthy fats, like crisco, butter, and lard • Fatty acids that are missing at least one hydrogen are “unsa ...
Genetics - Michael
Genetics - Michael

... Having established that DNA contains genes, Chapter 3 examines the structure of a gene, and how this information it stored and utilized by the cell. The processes of transcription and translation are covered in this chapter, as well as an introduction to DNA replication. The study of DNA replication ...
Updated slides on gene prediction
Updated slides on gene prediction

Sequence of the Tribolium castaneum Homeotic Complex
Sequence of the Tribolium castaneum Homeotic Complex

... genes, the total length of the transcription units and the length of the large intron upstream of the homeobox (when present) were determined from the sequence described here (Table 1). Exon sizes reported here confirm previous analyses and are included for completeness. Tclab is located at the 3⬘ e ...
Pseudogenes as regulators of biological function
Pseudogenes as regulators of biological function

... ribosomal proteins [10]. It is of note that whereas mammalian genomes are particularly well endowed with pseudogene numbers [9], they are by no means the only species that harbour them. Pseudogenes have been found in various species [11], including bacteria, plants, insects and nematode worms, examp ...
Recent publications by the group 1. M. Briman, NPArmitage, E
Recent publications by the group 1. M. Briman, NPArmitage, E

... Recent publications by the group 1. M. Briman, N.P.Armitage, E.Helgren and G.Gruner, "Dipole Relaxation Losses in DNSA", Phys. Rev. Lett (submitted for publication) 2. Montrichok, G. Grüner, and G. Zocchi, "Trapping intermediates in the melting transition of DNA oligomers,"Europhys. Lett. 62,452 (20 ...
Mycobacterium kyorinense sp. nov., a novel, slow
Mycobacterium kyorinense sp. nov., a novel, slow

... the Mycobacterium avium complex, and is also seen in M. celatum and M. branderi, suggesting that the new isolates are closely related to these Mycobacterium species (Fig. 1) (Butler et al., 1993; Brander et al., 1992). The sequence of the 16S rRNA gene was identical in all strains, but was different ...
A GENETIC LINKAGE MAP OF Phycomyces blakesleeanus
A GENETIC LINKAGE MAP OF Phycomyces blakesleeanus

... this research the genome (version 1.1) was made up of 491 fragments. The genetic linkage map shows the arrangement of genes and genetic markers along the chromosomes as calculated by the frequency with which they are co-inherited together. The map can also provide information about the number of ch ...
Two groups of human herpesvirus 6 identified by sequence
Two groups of human herpesvirus 6 identified by sequence

... (Martin et al., 1991; Lindquester & Pellett, 1991). In this study we investigated the molecular basis for differences between HH¥-6 strain groups by PCR and sequence analysis of 15 variants, including laboratory reference strains from both groups. We also studied, by PCR, strains in two potential pa ...
Evolutionary Origin of Recombination during Meiosis
Evolutionary Origin of Recombination during Meiosis

... -proteobacterium was transferred to, and became integrated into, the host genome. Phylogenetic studies suggest that 630 or more genes were transferred from the -proteobacterial genome to the eukaryotic nuclear genome (Gabaldon and Huynen 2003); therefore, if the ancestral -proteobacterium were ca ...
Disrupting antibiotic resistance propagation by inhibiting
Disrupting antibiotic resistance propagation by inhibiting

... two tyrosines would be required to resolve the replicative oriT intermediate and release the T-strand to complete transfer. CPR events explain the reported low-frequency generation of greater than unit-length conjugative plasmids (44). Although CPR may not be the primary conjugative pathway, plasmid ...
Combing of Molecules in Microchannels
Combing of Molecules in Microchannels

... understood, we were able to vary the shape of the interface in a continuous fashion by altering the rate at which the fluid was withdrawn from the channel. In particular, we were able to obtain a flat interface, shown in Figure 1E, as an intermediate state between the convex interface (Figure 1A) th ...
Factors Affecting synonymous codon Usage Bias in chloroplast
Factors Affecting synonymous codon Usage Bias in chloroplast

... plant nuclear genes and in chloroplasts.32 Chloroplasts differ from the nuclear genome of higher plants in that they encode only 30 tRNA species. Since chloroplasts have restricted their tRNA genes, the use of preferred codons by chloroplast encoded proteins appears more extreme. However, a positive ...
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Helitron (biology)

A helitron is a transposon found in eukaryotes that is thought to replicate by a so-called ""rolling-circle"" mechanism. This category of transposons was discovered by Vladimir Kapitonov and Jerzy Jurka in 2001. The rolling-circle process begins with a break being made at the terminus of a single strand of the helitron DNA. Transposase then sits at this break and at another break where the helitron targets as a migration site. The strand is then displaced from its original location at the site of the break and attached to the target break, forming a circlular heteroduplex. This heteroduplex is then resolved into a flat piece of DNA via replication. During the rolling-circle process, DNA can be replicated beyond the initial helitron sequence, resulting in the flanking regions of DNA being ""captured"" by the helitron as it moves to a new location.
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