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Genetic suppression
Genetic suppression

... 9. Extragenic suppression by modified splicing Two kinds of suppression by modified splicing have been reported. The first kind depends on compensatory mutations in splice-site recognition machinery, and the second is associated with mutations that affect alternative splicing. The first kind involve ...
Annotation mapping functions
Annotation mapping functions

... The Stockholm Bioinformatics Centre has compiled some data packages containing orthologs and paralogs (collectively called homologs) [1, 8, 10]. These are very useful if you need to map ids from one species to another. At the current time, there are about 38 species in the data packages. These data ...
1 Human Inheritance - Northside Middle School
1 Human Inheritance - Northside Middle School

... forms of a gene that code for a single trait. Even though a gene may have multiple alleles, a person can carry only two of those alleles. This is because chromosomes exist in pairs. Each chromosome in a pair carries only one allele for each gene. Human blood type is controlled by a gene with multipl ...
Genotype - workingalonestinks
Genotype - workingalonestinks

... Definition: An allele is an alternative form of a gene (one member of a pair) that is located at a specific position on a specific chromosome. F- For my slide show this will be considered the dominant allele which mean that if a child has this as one of its two alleles then they will most definitely ...
iron-regulatory protein 1
iron-regulatory protein 1

... As the major cofactor of proteins involved in essential processes like photosynthesis, respiration, DNA replication or nitrogen fixation, iron is an essential element for life. Nonetheless, in the free ionic form, iron is toxic, as it can catalyse the formation of ROS (reactive oxygen species) throu ...
Evolution of Gene Order and Chromosome Number in
Evolution of Gene Order and Chromosome Number in

... recombining sites. This is not the same as the classification of recombinations as illegitimate or legitimate, which depends on whether the recombining sites have local sequence similarity (not genomic location similarity). Illegitimate translocation involves reciprocal recombination between apparen ...
Biology 22 Problem Set 1 Spring 2003
Biology 22 Problem Set 1 Spring 2003

... by a defect in phagocytosis, is inherited with the X-linked recessive allele g. The X-linked dominant allele G prevents the disease. A straight hairline is inherited with the autosomal recessive allele w. Individuals with the autosomal dominant allele W have a widow’s peak, where the hairline comes ...
Multiple testing
Multiple testing

Supplements - Haiyuan Yu
Supplements - Haiyuan Yu

... into the next conversion algorithm. Conversion algorithms associated with each edge vary throughout the graph, and must take into account different parameters depending on the type of conversion being made. For instance, converting from a genomic locus to transcript locus follows inherently differen ...
Functional Divergence of the Nuclear Receptor NR2C1
Functional Divergence of the Nuclear Receptor NR2C1

... combination of branch-site codon models (developed to detect episodes of positive selection) and clade-site models (developed to detect any change in the distribution of selection pressures) to improve our capacity to detect functional divergence within NRs. Combining these models can uncover functi ...
Two distinct teleost hepatocyte nuclear factor 1 genes, hnf1a/tcf1
Two distinct teleost hepatocyte nuclear factor 1 genes, hnf1a/tcf1

... hnf1b/vhnf1/tcf2, in tetrapods (Sourdive and Yaniv, 1997) and HNF1 could perform function as homodimer or heterodimer (Rey-Campos et al., 1991). HNF1a is an essential transcription factor for many hepatic genes including albumin, a1-antitrypsin, h-fibrinogen, liver-type fatty acid binding protein (L ...
A rough guide to Drosophila mating schemes (light version 2.1) 1
A rough guide to Drosophila mating schemes (light version 2.1) 1

... used that carry gene mutations, chromosomal aberrations or transgenic constructs. These different fly variants are the bread-and-butter of fly research, providing the tools by which genes are manipulated or visualised in action in order to investigate their function. The art of Drosophila genetics i ...
Effects of cadmium on the regulation of antioxidant enzyme activity
Effects of cadmium on the regulation of antioxidant enzyme activity

... The libraries of suppressive subtractive hybridization (SSH) and rapid amplification of cDNA ends (RACE) were created for cloning the genes of antioxidant enzymes from Cu-treated thalli. Total ribonucleic acid (RNA) of thalli treated with or without extra 50 µM CuSO4 (3, 6 and 9 h) was extracted usi ...
Joshua Krämer Dr. med. Pyruvate Kinase Expression and Activity in
Joshua Krämer Dr. med. Pyruvate Kinase Expression and Activity in

... Pyruvate kinase activity is known to be impaired in many forms of cancer because expression is shifted from the tissue-specific pyruvate kinase isoform to the less active isoform M2. This may be relevant to diabetes because there are some links between diabetes and cancer: The two diseases have some ...
Leukaemia Section T-lineage acute lymphoblastic leukemia (T-ALL) Atlas of Genetics and Cytogenetics
Leukaemia Section T-lineage acute lymphoblastic leukemia (T-ALL) Atlas of Genetics and Cytogenetics

... karyotype. Recent molecular cytogenetics studies have revealed a higher incidence of TRB@ locus rearrangements (about 20% of all T-ALL cases). This finding demonstrates that the frequency of TRB@ rearrangements is similar to that of TRA@ (14q11.2) (about 24% of all T-ALL cases). Simultaneous rearran ...
Involvement of respiratory chain in biofilm formation in - HAL
Involvement of respiratory chain in biofilm formation in - HAL

... genes lanking the mutation. The mutations had no effect on bacterial growth in anaerobic condition as expected. However, these genes may be involved in bacterial growth under variable nutrients or in the presence of few quantity of oxygen. Thus future experiment will be performed in different condit ...
Table 3S
Table 3S

... operon encodes the enzyme for synthesis of citrulline which is converted to Arg by the products of the argGH genes (Belitsky, 2002). The yqiXYZ operon encodes a high affinity Arg transport system (Sekowska et al., 2001).The cysH operon together with cysK encodes enzymes for the synthesis of Cys fro ...
Polymorphism and expression of NF-B in relation to susceptibility and
Polymorphism and expression of NF-B in relation to susceptibility and

... factors. Despite this, some cells begin to develop into cancer cells, and if this process is allowed to continue, it will develop into cancer disease. To become cancerous, a cell must break several biological barriers. Two important barriers are apoptosis and cellular growth control. Cancer is a mul ...
biological dynamics
biological dynamics

... 2. Sort for specific behavior changes or deficits 3. Search for the underlying gene mutation • became the father of neurogenetics ...
Genetic disorders of pigmentation - Zielinski Fam
Genetic disorders of pigmentation - Zielinski Fam

... hyperpigmentations that give with the adjacent normal skin a bmosaicQ pattern. The hypopigmented patches can be isolated (10%-20% of cases). Contrary to vitiligo, these patches are congenital, stable with time, and do not repigment. Histopathological examination shows a total absence or almost absen ...
Increased transcription rates correlate with increased reversion rates
Increased transcription rates correlate with increased reversion rates

... leuB and argH mRNA synthesis were determined using half-lives and concentrations, during exponential growth and at several time points during 30 min of amino acid starvation. Changes in mRNA concentration were primarily due to increased mRNA synthesis and not to increased stability. Four strains of ...
Experiment - people.vcu.edu
Experiment - people.vcu.edu

... solutions to combat Cardiovascular disease in the United States to save lives and money. One possible solution to combat Cardiovascular disease is heart regeneration. Unlike humans, many lower vertebrates when injured, are able to regenerate limbs, appendages or internal organs. The Zebrafish is a p ...
Estonian HumanGenesResearchAct.
Estonian HumanGenesResearchAct.

... inability to participate in the work of the supervisory board or the causing of significant damage to the interests of the chief processor of the Gene Bank in any other manner, and also the commencement of bankruptcy proceedings against the member of the supervisory board. § 5. Authorised processor ...
Biology 40S Genetics Booklet (StudentsCopy2)
Biology 40S Genetics Booklet (StudentsCopy2)

... Gregor Mendel used pea plants to show how simple traits are passed from one generation to the next. He used purebred plants (where the offspring have all the same traits as their parents). He controlled pollination so that no other plants could introduce new genotypes. We can apply Mendel's laws to ...
The Arabidopsis ABHD11 Mutant Accumulates
The Arabidopsis ABHD11 Mutant Accumulates

... syndrome, an autosomal recessive disorder in humans (Rozenszajn et al., 1966; Dorfman et al., 1974; Chanarin et al., 1975). More recently, studies have demonstrated that human CGI-58 has lysophosphatidic acid (LPA) acyltransferase (Ghosh et al., 2008a) and lysophosphatidylglycerol (LPG) acyltransfer ...
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RNA-Seq



RNA-seq (RNA sequencing), also called whole transcriptome shotgun sequencing (WTSS), is a technology that uses the capabilities of next-generation sequencing to reveal a snapshot of RNA presence and quantity from a genome at a given moment in time.
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