2015 department of medicine research day
... Tail amputation was performed three days post fertilization (dpf). Post-amputation fishes were treated with or without 25 µg/ml UFP in E3 solution. UFP induced abnormal vascular repair in the zebrafish model (n=16 out of 20) compared to control (n=4 out of 20). Abnormalities included incomplete repa ...
... Tail amputation was performed three days post fertilization (dpf). Post-amputation fishes were treated with or without 25 µg/ml UFP in E3 solution. UFP induced abnormal vascular repair in the zebrafish model (n=16 out of 20) compared to control (n=4 out of 20). Abnormalities included incomplete repa ...
Albinism - Harlem Children Society
... Bioinformatics is the analysis of biological information using computers and statistical techniques; the science of developing and utilizing computer databases and algorithms to accelerate and enhance biological research. Bioinformatics is more of a tool than a discipline, the tools for analysis of ...
... Bioinformatics is the analysis of biological information using computers and statistical techniques; the science of developing and utilizing computer databases and algorithms to accelerate and enhance biological research. Bioinformatics is more of a tool than a discipline, the tools for analysis of ...
Chromosome Theory
... The most viable variations in chromosome number are those that deal with the sex chromosomes: XO - Turner’s Syndrome - Phenotypically females XXX…- “Super” females XYY… - “Super” Males - On average tend to be larger and less intelligent XXY - Klinefelter’s Syndrome - Phenotypically male Of the non-s ...
... The most viable variations in chromosome number are those that deal with the sex chromosomes: XO - Turner’s Syndrome - Phenotypically females XXX…- “Super” females XYY… - “Super” Males - On average tend to be larger and less intelligent XXY - Klinefelter’s Syndrome - Phenotypically male Of the non-s ...
Metatranscriptomic analysis of the Gut microbial community
... Influence of the gut microbiome on adipogenesis. Different dietary molecules can result in changes in the gut microbial flora. The fermentation of carbohydrates and other nutrients by the gut microbiota on a high fat/high carbohydrate diet can result in an increase SCFA concentration and can result ...
... Influence of the gut microbiome on adipogenesis. Different dietary molecules can result in changes in the gut microbial flora. The fermentation of carbohydrates and other nutrients by the gut microbiota on a high fat/high carbohydrate diet can result in an increase SCFA concentration and can result ...
Biology 3201 Chromosomal Mutations Information Table
... Fragile X chromosome is a well studied example of this problem. See Figure 16.28, p.552 ...
... Fragile X chromosome is a well studied example of this problem. See Figure 16.28, p.552 ...
The Differential Killing of Genes by Inversions in Prokaryotic Genomes
... strand is located on the leading strand, it is assumed that “the gene lies on the leading strand.” In prokaryotic genomes, the leading and lagging roles of DNA strands are predetermined by location of the origin of replication and the terminus of replication. Thus, a gene stays at the same position ...
... strand is located on the leading strand, it is assumed that “the gene lies on the leading strand.” In prokaryotic genomes, the leading and lagging roles of DNA strands are predetermined by location of the origin of replication and the terminus of replication. Thus, a gene stays at the same position ...
Metabolic Engineering to Modify Flower Color
... in the pathway depending on species. In petunia flowers, Anl (a Myc gene), An2 (a Myb gene) and Anil are regulatory genes of anthocyanin biosynthesis in the flower. Anil encodes a novel Trp-Asp repeat protein and is a component of a signal transduction cascade that modulates An2 function (de Vetten ...
... in the pathway depending on species. In petunia flowers, Anl (a Myc gene), An2 (a Myb gene) and Anil are regulatory genes of anthocyanin biosynthesis in the flower. Anil encodes a novel Trp-Asp repeat protein and is a component of a signal transduction cascade that modulates An2 function (de Vetten ...
Statistical analysis of DNA microarray data
... Which genes to use for normalization Housekeeping genes Genes involved in essential activities of cell maintenance and survival, but not in cell function and proliferation These genes will be similarly expressed in all samples. Difficult to identify – need to be confirmed Affymetrix GeneC ...
... Which genes to use for normalization Housekeeping genes Genes involved in essential activities of cell maintenance and survival, but not in cell function and proliferation These genes will be similarly expressed in all samples. Difficult to identify – need to be confirmed Affymetrix GeneC ...
User Manual of ClusterProject
... The column of Rep is indispensable whether the experiment has replication or not. If there is no replication, all values of this column are set to one. It can have additional factors in the input file such as dye, treatment or array et al. This is tab-delimited text file. Mixed model approaches are ...
... The column of Rep is indispensable whether the experiment has replication or not. If there is no replication, all values of this column are set to one. It can have additional factors in the input file such as dye, treatment or array et al. This is tab-delimited text file. Mixed model approaches are ...
Measuring the Rates of Transcriptional Elongation in the Female
... the nuclear run-on assay readily detected an approximately 1.5-fold change in the transcriptional rate of a housekeeping gene in D. melanogaster ovaries. A central assumption in this assay is that only transcripts initiated by RNA pol II prior to cell lysis are extended during the radiolabeling reac ...
... the nuclear run-on assay readily detected an approximately 1.5-fold change in the transcriptional rate of a housekeeping gene in D. melanogaster ovaries. A central assumption in this assay is that only transcripts initiated by RNA pol II prior to cell lysis are extended during the radiolabeling reac ...
Prof. Kamakaka`s Lecture 16 Notes
... Catabolite Repression of the lac operonWhen we introduced the subject of regulation of gene expression, I gave an example of the response of E. coli when placed in a media containing both glucose and lactose. The induction of the lac operon does not occur until all the glucose has been metabolized. ...
... Catabolite Repression of the lac operonWhen we introduced the subject of regulation of gene expression, I gave an example of the response of E. coli when placed in a media containing both glucose and lactose. The induction of the lac operon does not occur until all the glucose has been metabolized. ...
Cloning, Sequencing, and Characterization of the Pradimicin
... aldol reactions, and for producing the stepwise ring closures that lead to the angular pentacyclic molecular structure (Fig. 1). PrmD shows high sequence similarity to the N-terminal region of RubF, GrhT, and TcmN. The RubF, GrhT, and TcmN are bifunctional cyclases that consist of two halves, being ...
... aldol reactions, and for producing the stepwise ring closures that lead to the angular pentacyclic molecular structure (Fig. 1). PrmD shows high sequence similarity to the N-terminal region of RubF, GrhT, and TcmN. The RubF, GrhT, and TcmN are bifunctional cyclases that consist of two halves, being ...
A Genetical Genomics Project
... In N independent tests, the expected P-value of the most significant result to occur by chance is 1/(N+1) [because P-values are uniformly distributed on [0,1]] Whilst it is not true that tests are independent, it is often a good guide to what will be observed in reality. Often, at these scales, P-va ...
... In N independent tests, the expected P-value of the most significant result to occur by chance is 1/(N+1) [because P-values are uniformly distributed on [0,1]] Whilst it is not true that tests are independent, it is often a good guide to what will be observed in reality. Often, at these scales, P-va ...
Statistical analysis of DNA microarray data
... • Which genes to use for normalization • Housekeeping genes • Genes involved in essential activities of cell maintenance and survival, but not in cell function and proliferation • These genes will be similarly expressed in all samples. • Difficult to identify – need to be confirmed • Affymetrix Gene ...
... • Which genes to use for normalization • Housekeeping genes • Genes involved in essential activities of cell maintenance and survival, but not in cell function and proliferation • These genes will be similarly expressed in all samples. • Difficult to identify – need to be confirmed • Affymetrix Gene ...
Bcmb625-XistPaper-26apr07clp
... - Exclusion of machinery occurs earlier than repression - expression persists during differentiation day 1 and 2 - machinery is excluded during the observed expression - persistence of primary transcripts causes delay in silencing - Jarid1c escapes complete inactivation because it is distal to Xist ...
... - Exclusion of machinery occurs earlier than repression - expression persists during differentiation day 1 and 2 - machinery is excluded during the observed expression - persistence of primary transcripts causes delay in silencing - Jarid1c escapes complete inactivation because it is distal to Xist ...
Bacteriophage l and Its Relatives
... and lysogenic life cycles is made. (The molecular basis of this decision is described below.) If the phage opts for the lytic cycle, it proceeds through an orderly expression of genes, production of progeny virions, and release of the progeny through cell lysis, as described in detail for l below. T ...
... and lysogenic life cycles is made. (The molecular basis of this decision is described below.) If the phage opts for the lytic cycle, it proceeds through an orderly expression of genes, production of progeny virions, and release of the progeny through cell lysis, as described in detail for l below. T ...
Layer 2 - CRM activity
... annotated genes can be readily tested by in-situ hybridization. Thus, we model gene activity as a matrix G ={Gjk} , where j corresponds to the gene index and k to the activity class. Again, the coverage of available data for gene activity is not complete, however it is already close to 45% of all D ...
... annotated genes can be readily tested by in-situ hybridization. Thus, we model gene activity as a matrix G ={Gjk} , where j corresponds to the gene index and k to the activity class. Again, the coverage of available data for gene activity is not complete, however it is already close to 45% of all D ...
bbr038online 474..484 - Oxford Academic
... docs/compara/homology_method.html), but this approach is not readily applicable to newly sequenced genomes by individual researchers, because it is not yet well documented or available outside the Ensembl pipeline. In this study, we focused on the genome of a species in the order of chimaeras (Chima ...
... docs/compara/homology_method.html), but this approach is not readily applicable to newly sequenced genomes by individual researchers, because it is not yet well documented or available outside the Ensembl pipeline. In this study, we focused on the genome of a species in the order of chimaeras (Chima ...
Free Full Text ( Final Version , 339kb )
... Both distributions have a Zipfian shape, which means that few SFs occur very frequently in MEDLINE, and many SFs occur rarely. There are 24,393 human genes in Locuslink, of which 12,533 (51.4%) have at least two symbols (or synonyms). 16,828 genes have a matching LF. Of these genes, 5,812 (34.5%) ha ...
... Both distributions have a Zipfian shape, which means that few SFs occur very frequently in MEDLINE, and many SFs occur rarely. There are 24,393 human genes in Locuslink, of which 12,533 (51.4%) have at least two symbols (or synonyms). 16,828 genes have a matching LF. Of these genes, 5,812 (34.5%) ha ...