Data Analysis Using GeneSpring.ppt
... arrays have been run in order to answer a specific scientific question. • Sample: can be data files or sample which is created within GeneSpring. • Exp. Grouping, Parameter: ie. Treat vs un-treat, age, gender, …. • Interpretation: defines a particular way of grouping samples into experimental condit ...
... arrays have been run in order to answer a specific scientific question. • Sample: can be data files or sample which is created within GeneSpring. • Exp. Grouping, Parameter: ie. Treat vs un-treat, age, gender, …. • Interpretation: defines a particular way of grouping samples into experimental condit ...
Ensembl Mart
... • BioMart is a search engine that can find multiple terms and put them into a table format. • Such as: mouse gene (IDs), chromosome and base pair position • No programming required! ...
... • BioMart is a search engine that can find multiple terms and put them into a table format. • Such as: mouse gene (IDs), chromosome and base pair position • No programming required! ...
What is a gene?
... • genes for individual enzymes of one pathway are often located far apart in the genome ...
... • genes for individual enzymes of one pathway are often located far apart in the genome ...
Week 13
... Copy number analysis Reconstruction of extinct species’ genomes Whole transcriptome (poly-A selection) Small RNA analysis (siRNA, snoRNA, lincRNA, etc.) Gene expression profiling for selected target genes Rare cell identification ...
... Copy number analysis Reconstruction of extinct species’ genomes Whole transcriptome (poly-A selection) Small RNA analysis (siRNA, snoRNA, lincRNA, etc.) Gene expression profiling for selected target genes Rare cell identification ...
DNA Worksheet
... Now, due to the hydrogen bonds, the two strands don’t actually form a flat “stepladder”. They coil around each other and form what is called a “double helix”. - Press the green (Go on) arrow to see this double helix structure of DNA. Watch this animation for awhile. 23. DNA consists of a long double ...
... Now, due to the hydrogen bonds, the two strands don’t actually form a flat “stepladder”. They coil around each other and form what is called a “double helix”. - Press the green (Go on) arrow to see this double helix structure of DNA. Watch this animation for awhile. 23. DNA consists of a long double ...
Unit 3 PreTest Heredity and Genetics
... The graph above shows the survival rate for several different varities of corn during a sever July drought. One type of corn was bred selectively over many years to thrive in dry climates. Which typ fo corn was ...
... The graph above shows the survival rate for several different varities of corn during a sever July drought. One type of corn was bred selectively over many years to thrive in dry climates. Which typ fo corn was ...
Mechanisms of Evolution Study Guide
... b. All of the different species in one environment will all have the same adaptations to survive in that environment. c. An adaptation that is favorable in an environment today, will always be favorable in that environment. ...
... b. All of the different species in one environment will all have the same adaptations to survive in that environment. c. An adaptation that is favorable in an environment today, will always be favorable in that environment. ...
14.1_214-218
... Karyotypes A genome is the full set of all the genetic information that an organism carries in its DNA. Chromosomes are bundles of DNA and protein found in the nucleus of a eukaryotic cell. A karyotype is a picture that shows the complete diploid set of human chromosomes, grouped in pairs and arrang ...
... Karyotypes A genome is the full set of all the genetic information that an organism carries in its DNA. Chromosomes are bundles of DNA and protein found in the nucleus of a eukaryotic cell. A karyotype is a picture that shows the complete diploid set of human chromosomes, grouped in pairs and arrang ...
Study Guide-Exam II Chapter 10 Know which recombinant proteins
... 2 Exam questions (Bring your typewritten answers to class; limit each answer to 1 single sided page) 1. Explain how you would go about creating a traditional vaccine for the H1N1 virus, and then explain how you could produce an effective recombinant subunit vaccine for this H1N1 virus in yeast. What ...
... 2 Exam questions (Bring your typewritten answers to class; limit each answer to 1 single sided page) 1. Explain how you would go about creating a traditional vaccine for the H1N1 virus, and then explain how you could produce an effective recombinant subunit vaccine for this H1N1 virus in yeast. What ...
I. Mutations: primary tools of genetic analysis
... Mutations: primary tools of genetic analysis ...
... Mutations: primary tools of genetic analysis ...
Biology UNIT 2 Heredity: Inheritance and Variation of traits Big Ideas
... molecule, and each gene on the chromosome is a particular segment of that DNA. The instructions for forming species’ characteristics are carried in DNA. All cells in an organism have the same genetic content, but the genes used (expressed) by the cell may be regulated in different ways. Not all DNA ...
... molecule, and each gene on the chromosome is a particular segment of that DNA. The instructions for forming species’ characteristics are carried in DNA. All cells in an organism have the same genetic content, but the genes used (expressed) by the cell may be regulated in different ways. Not all DNA ...
Genetic Technology
... – Selective Breeding involves choosing two organisms of the same species and mating them with the hope of getting the best qualities of each parent to show up in the offspring. – Genetic Engineering involves identifying certain genes and moving them from one organism to another – even to a different ...
... – Selective Breeding involves choosing two organisms of the same species and mating them with the hope of getting the best qualities of each parent to show up in the offspring. – Genetic Engineering involves identifying certain genes and moving them from one organism to another – even to a different ...
Regulating Evolution - Nicolas Gompel`s lab
... fairly simple grammar, enhancers cannot be recognized solely on the basis of their DNA sequences and must be identified experimentally. Enhancers are usually hundreds of base pairs in length and may be located on either side of a gene or even within a noncoding stretch inside a gene. They can also b ...
... fairly simple grammar, enhancers cannot be recognized solely on the basis of their DNA sequences and must be identified experimentally. Enhancers are usually hundreds of base pairs in length and may be located on either side of a gene or even within a noncoding stretch inside a gene. They can also b ...
Extra Credit DNA Study Guide
... 4. Use a restriction enzyme to cut the insulin gene out of the human DNA. 5. Use a restriction enzyme to cut the bacterial plasmid round DNA. 6. Insert the genetic marker and the gene into the plasmid DNA. 54. What is the process illustrated on page 304-305? ...
... 4. Use a restriction enzyme to cut the insulin gene out of the human DNA. 5. Use a restriction enzyme to cut the bacterial plasmid round DNA. 6. Insert the genetic marker and the gene into the plasmid DNA. 54. What is the process illustrated on page 304-305? ...
Chapter 14 - useful links
... When you study sex chromosomes, you find that male and female sex chromosomes are different. Male chromosomes are deficient. Maybe that’s why males are… Well anyway male sex chromosomes look like Xy, and female sex chromosomes look like XX . That means that all female gametes contain an X sex chromo ...
... When you study sex chromosomes, you find that male and female sex chromosomes are different. Male chromosomes are deficient. Maybe that’s why males are… Well anyway male sex chromosomes look like Xy, and female sex chromosomes look like XX . That means that all female gametes contain an X sex chromo ...
Use of Bioinformatic Databases
... PROSITE - database of protein families and domains Pfam - alignments and hidden Markov models covering many common protein domains SMART - analysis of domains in proteins ProDom - protein domain database PRINTS Database - groups of conserved motifs used to characterise protein families Blocks - mult ...
... PROSITE - database of protein families and domains Pfam - alignments and hidden Markov models covering many common protein domains SMART - analysis of domains in proteins ProDom - protein domain database PRINTS Database - groups of conserved motifs used to characterise protein families Blocks - mult ...
Genetic Drift, Founder Effect, Bottleneck Effect
... • Is a change in the allele frequencies of a population as a result of chance processes. • It happens in small populations where chance alone can play a considerable role. • Heterozygous gene pairs tend to become homozygous for one allele by chance rather than selection, so that the alternative can ...
... • Is a change in the allele frequencies of a population as a result of chance processes. • It happens in small populations where chance alone can play a considerable role. • Heterozygous gene pairs tend to become homozygous for one allele by chance rather than selection, so that the alternative can ...
chap12studyguide
... 12.In E. coli, the lac operon controls the_________? 13.What are the parts of a Eukaryotic Chromosome? 14.Hox genes determine an animal’s __________? Completion Complete each statement. 15. According to the principle of ____________________, hydrogen bonds can form only between adenine and thymine, ...
... 12.In E. coli, the lac operon controls the_________? 13.What are the parts of a Eukaryotic Chromosome? 14.Hox genes determine an animal’s __________? Completion Complete each statement. 15. According to the principle of ____________________, hydrogen bonds can form only between adenine and thymine, ...
Microarrays - Computational Bioscience Program
... Tzu Lip Phang, Ph.D. Lawrence Hunter, Ph.D. Associate Professor of Bioinformatics ...
... Tzu Lip Phang, Ph.D. Lawrence Hunter, Ph.D. Associate Professor of Bioinformatics ...
Genes that are located on the same
... Genes that are located on the same chromosome are called linked genes. Alleles for these genes tend to segregate together during meiosis, unless they are separated by crossing-over. Crossing-over occurs when two homologous chromosomes exchange genetic material during meiosis I. **The closer together ...
... Genes that are located on the same chromosome are called linked genes. Alleles for these genes tend to segregate together during meiosis, unless they are separated by crossing-over. Crossing-over occurs when two homologous chromosomes exchange genetic material during meiosis I. **The closer together ...
lecture23_AnnotatePr..
... 93% of bases are represented in a primary transcript identified by at least 2 independent observations, some by same technology many of the resulting transcripts are neither traditional protein-coding genes nor explainable by structural non-coding RNAs the rest of the paper shows extensive amounts o ...
... 93% of bases are represented in a primary transcript identified by at least 2 independent observations, some by same technology many of the resulting transcripts are neither traditional protein-coding genes nor explainable by structural non-coding RNAs the rest of the paper shows extensive amounts o ...
Slide 1
... • The fundamental aim of genetics is to understand how an organism's phenotype is determined by its genotype, and implicit in this is predicting how changes in DNA sequence alter phenotypes. A single network covering all the genes of an organism might guide such predictions down to the level of indi ...
... • The fundamental aim of genetics is to understand how an organism's phenotype is determined by its genotype, and implicit in this is predicting how changes in DNA sequence alter phenotypes. A single network covering all the genes of an organism might guide such predictions down to the level of indi ...
Chapter 11 Notes
... a) Some contain gene regulation sequences that function on the transcription level ...
... a) Some contain gene regulation sequences that function on the transcription level ...
Genome evolution
Genome evolution is the process by which a genome changes in structure (sequence) or size over time. The study of genome evolution involves multiple fields such as structural analysis of the genome, the study of genomic parasites, gene and ancient genome duplications, polyploidy, and comparative genomics. Genome evolution is a constantly changing and evolving field due to the steadily growing number of sequenced genomes, both prokaryotic and eukaryotic, available to the scientific community and the public at large.