The Arabidopsis RAD51 paralogs RAD51B, RAD51D and XRCC2
... Our results provide strong evidence that Arabidopsis XRCC2, RAD51B and RAD51D have complex functions in somatic DNA repair and gene regulation, arguing for further studies of these ancient genes that have been maintained in both plants and animals during their long evolutionary history. ...
... Our results provide strong evidence that Arabidopsis XRCC2, RAD51B and RAD51D have complex functions in somatic DNA repair and gene regulation, arguing for further studies of these ancient genes that have been maintained in both plants and animals during their long evolutionary history. ...
artificial yeast chromosomes
... without SUP11, the yeast turn red; with one copy, they are pink, and with two or more copies they are white. The yeast you will be working with are homozygous for ade2-101, so two copies of the SUP11 gene are necessary to fully suppress the mutation. The strains that you will be working with have ha ...
... without SUP11, the yeast turn red; with one copy, they are pink, and with two or more copies they are white. The yeast you will be working with are homozygous for ade2-101, so two copies of the SUP11 gene are necessary to fully suppress the mutation. The strains that you will be working with have ha ...
Lecture-Mic 623-Plasmids-Corynebacterium - Home
... HmuT binds in vitro to haemin- and haemoglobin-agarose, suggesting that it is capable of binding both haemin and haemoglobin and may function as the haemin receptor in C. diphtheriae. ...
... HmuT binds in vitro to haemin- and haemoglobin-agarose, suggesting that it is capable of binding both haemin and haemoglobin and may function as the haemin receptor in C. diphtheriae. ...
Pisum Genetics Volume 26 1994 Preface 1 PGA "Pisum Genetics
... Coordinator of Gene Symbols. If you are proposing a new gene symbol please check with Mike that the symbol is free and appropriate. In most cases not more than three letters are necessary to symbolise a locus. Again if you are proposing a new gene please make a reasonable effort to check for allelis ...
... Coordinator of Gene Symbols. If you are proposing a new gene symbol please check with Mike that the symbol is free and appropriate. In most cases not more than three letters are necessary to symbolise a locus. Again if you are proposing a new gene please make a reasonable effort to check for allelis ...
A Fitness-Independent Evolvability Measure for Evolutionary
... gene regulatory model in terms of the trade-off between innovation (phenotypic variability) and robustness. It was concluded that robustness may harm short-term innovation, but robustness is essential for the emergence of long-term innovation. Jin et al [7] investigated the relationship between inno ...
... gene regulatory model in terms of the trade-off between innovation (phenotypic variability) and robustness. It was concluded that robustness may harm short-term innovation, but robustness is essential for the emergence of long-term innovation. Jin et al [7] investigated the relationship between inno ...
A Novel Two Domain-Fusion Protein in Cyanobacteria with
... was used as a template in a 50 ll PCR reaction employing specific primers targeted against the coxA (CYB_2698) gene (2 min at 94C, 30 cycles of 1 min at 55, 72, and 94C; 5 min at 55C; 5 min at 72C) to verify that no contaminating genomic DNA remained. For RT-PCR experiments (Figure 5B), further ...
... was used as a template in a 50 ll PCR reaction employing specific primers targeted against the coxA (CYB_2698) gene (2 min at 94C, 30 cycles of 1 min at 55, 72, and 94C; 5 min at 55C; 5 min at 72C) to verify that no contaminating genomic DNA remained. For RT-PCR experiments (Figure 5B), further ...
video slide - Mrs. H-D
... Because only cells that can make both arginine and tryptophan (arg+ trp+ cells) can grow into colonies on minimal medium, the lack of colonies on the two control plates showed that no further mutations had occurred restoring this ability to cells of the mutant strains. Thus, each cell from the mixtu ...
... Because only cells that can make both arginine and tryptophan (arg+ trp+ cells) can grow into colonies on minimal medium, the lack of colonies on the two control plates showed that no further mutations had occurred restoring this ability to cells of the mutant strains. Thus, each cell from the mixtu ...
The Mitochondrial Genome of Chara vulgaris
... mtDNA than Chaetosphaeridium mtDNA. The high similarity of codon usage observed for these mtDNAs also is seen at the level of stop codons. Five of the 11 Chara mitochondrial genes ending with TGA or TAG have counterparts with the same stop codon in Marchantia and/or angiosperm mtDNAs ( atp4, atp8, r ...
... mtDNA than Chaetosphaeridium mtDNA. The high similarity of codon usage observed for these mtDNAs also is seen at the level of stop codons. Five of the 11 Chara mitochondrial genes ending with TGA or TAG have counterparts with the same stop codon in Marchantia and/or angiosperm mtDNAs ( atp4, atp8, r ...
Biological interpretation of genome-wide association studies using
... that account for associations as well as the pathways and tissue/ cell type context(s) in which the genes’ actions affect phenotypes. Although cell-type-specific expression quantitative trait loci (eQTLs) or coding (non-synonymous) variants in strong LD with associated variants can potentially link t ...
... that account for associations as well as the pathways and tissue/ cell type context(s) in which the genes’ actions affect phenotypes. Although cell-type-specific expression quantitative trait loci (eQTLs) or coding (non-synonymous) variants in strong LD with associated variants can potentially link t ...
Polymorphisms of the bovine growth differentiation factor 9 gene
... Growth differentiation factor 9 (GDF9) belongs to the transforming growth factor β superfamily and plays a critical role in ovarian follicular development and ovulation rate (Elvin et al., 1999; McNatty et al., 2005). Previous studies have shown that GDF9 is involved in cumulus expansion, hyaluronic ...
... Growth differentiation factor 9 (GDF9) belongs to the transforming growth factor β superfamily and plays a critical role in ovarian follicular development and ovulation rate (Elvin et al., 1999; McNatty et al., 2005). Previous studies have shown that GDF9 is involved in cumulus expansion, hyaluronic ...
Information Encoding in Biological Molecules: DNA and
... • select features to align + right-click + select “Align selected features” • sequences will show up in Jalview along with genomic sequence and three-frame translation Lab 5.2 ...
... • select features to align + right-click + select “Align selected features” • sequences will show up in Jalview along with genomic sequence and three-frame translation Lab 5.2 ...
Evolution of Coloration Patterns
... D. melanogaster (reviewed in Wittkopp et al. 2003a). Pigmentation in mice is also a vast field of research. There are more than 127 loci in mice affecting coloration (Bennett & Lamoreux 2003). Mammalian melanocytes, or pigment cells, are derived from the neural crest and migrate to various areas of t ...
... D. melanogaster (reviewed in Wittkopp et al. 2003a). Pigmentation in mice is also a vast field of research. There are more than 127 loci in mice affecting coloration (Bennett & Lamoreux 2003). Mammalian melanocytes, or pigment cells, are derived from the neural crest and migrate to various areas of t ...
Principal Components Analysis
... As mentioned in the introduction, Principal Components Analysis is a covariance analysis between different factors. Covariance is always measured between two factors. So with three factors, covariance is measured between factor x and y; y and z, and x and z. When more than 2 factors are involved, co ...
... As mentioned in the introduction, Principal Components Analysis is a covariance analysis between different factors. Covariance is always measured between two factors. So with three factors, covariance is measured between factor x and y; y and z, and x and z. When more than 2 factors are involved, co ...
Assessing the Affect of RNA and cDNA Freeze
... qPCR. Results from the Bioanalyzer, microarray, and Real-Time qPCR on total RNA indicate little to no affect on gene signatures suggesting that the stability of RNA to withstand repetitive freeze thaw episodes is remarkable. Interestingly, the Real-Time qPCR results for the freeze thaw cycling of cD ...
... qPCR. Results from the Bioanalyzer, microarray, and Real-Time qPCR on total RNA indicate little to no affect on gene signatures suggesting that the stability of RNA to withstand repetitive freeze thaw episodes is remarkable. Interestingly, the Real-Time qPCR results for the freeze thaw cycling of cD ...
Attachment PDF Icon
... • The maximal genomic span of a PET genomic alignment must be less than one million bp ...
... • The maximal genomic span of a PET genomic alignment must be less than one million bp ...
list of publications
... Bajusz I., Sauer F., Gyurkovics H. : The ENHANCER OF ZESTE protein is capable of stabilizing the inactive state of chromatin domains by histone methylation Bajusz I., Sipos L., Pintér L., Gyurkovics H.: The role of the POLYCOMB-group proteins in the active chromatin domains Honti V., Blastyák A., Pi ...
... Bajusz I., Sauer F., Gyurkovics H. : The ENHANCER OF ZESTE protein is capable of stabilizing the inactive state of chromatin domains by histone methylation Bajusz I., Sipos L., Pintér L., Gyurkovics H.: The role of the POLYCOMB-group proteins in the active chromatin domains Honti V., Blastyák A., Pi ...
Application of Microarrays to the Analysis of Gene Expression in Cancer
... slides (4 ). Spot sizes range between 80 and 150 m in diameter, and arrays that contain up to 80 000 spots can be obtained. Gene sequences to be arrayed are selected from several public databases, which contain resources to access well-characterized genes and expressed sequence tags (ESTs)5 represe ...
... slides (4 ). Spot sizes range between 80 and 150 m in diameter, and arrays that contain up to 80 000 spots can be obtained. Gene sequences to be arrayed are selected from several public databases, which contain resources to access well-characterized genes and expressed sequence tags (ESTs)5 represe ...
Published
... Richmond (USA). For six of the most positive regions found in the first genome scan, located on chromosomes 2, 4, 10, 16, 17 and 18, replication was found. Thus, in the different studies, peaks have been found on most chromosomes. These results may reflect differences in populations but may also ref ...
... Richmond (USA). For six of the most positive regions found in the first genome scan, located on chromosomes 2, 4, 10, 16, 17 and 18, replication was found. Thus, in the different studies, peaks have been found on most chromosomes. These results may reflect differences in populations but may also ref ...
第六届植物分子生物学暑期研讨班专家资料介绍
... The goal of our research is to elucidate the mechanisms by which the plant hormone auxin regulates plant growth and development. Although auxin has been studied for over a century, the biochemical mechanisms that govern auxin-regulated processes have remained elusive. One of the major obstacles in a ...
... The goal of our research is to elucidate the mechanisms by which the plant hormone auxin regulates plant growth and development. Although auxin has been studied for over a century, the biochemical mechanisms that govern auxin-regulated processes have remained elusive. One of the major obstacles in a ...
Solid Tumour Section Mesothelioma: t(14;22)(q32;q12) in mesothelioma Atlas of Genetics and Cytogenetics
... number NM_013986 version 3; former exon 7 in sequence with accession number X66899) is fused to exon 2 of YY1 (nucleotide 1160 accession number NM_003403 version 3). The putative EWSR1-YY1 protein would contain the transactivation domain of EWSR1 and the DNA binding domain of YY1 and thus may act as ...
... number NM_013986 version 3; former exon 7 in sequence with accession number X66899) is fused to exon 2 of YY1 (nucleotide 1160 accession number NM_003403 version 3). The putative EWSR1-YY1 protein would contain the transactivation domain of EWSR1 and the DNA binding domain of YY1 and thus may act as ...
Maximum likelihood methods for detecting adaptive evolution after
... 2000). However, an accelerated nonsynonymous rate also could be driven by a relaxation, but not complete loss, of selective constraints. Here, duplicated proteins evolve under relaxed functional constraints for some period of time, after which functional divergence occurs when formerly neutral subst ...
... 2000). However, an accelerated nonsynonymous rate also could be driven by a relaxation, but not complete loss, of selective constraints. Here, duplicated proteins evolve under relaxed functional constraints for some period of time, after which functional divergence occurs when formerly neutral subst ...
Tracing the Thread of Plastid Diversity through the Tapestry of Life
... Herrmann 1998). Those plastid proteins not encoded in the plastid genome are encoded in the nuclear genome and must be targeted to the plastid. Three mechanisms underlie this reduction of the plastid genome; gene loss, substitution, and transfer. First, in the case of gene loss, genes that no longer ...
... Herrmann 1998). Those plastid proteins not encoded in the plastid genome are encoded in the nuclear genome and must be targeted to the plastid. Three mechanisms underlie this reduction of the plastid genome; gene loss, substitution, and transfer. First, in the case of gene loss, genes that no longer ...
Slide 1
... Some mutations that affect individual organisms can also affect a species or even an entire ecosystem. ...
... Some mutations that affect individual organisms can also affect a species or even an entire ecosystem. ...
MAGMA manual (v0.2)
... location file, only SNPs with rs-ID present in both the data and the SNP location file can be used in the analysis. WARNING: when using your data .bim file as SNP location file, make sure that the SNP locations in the .bim file refer to the same human reference genome build version as the gene loca ...
... location file, only SNPs with rs-ID present in both the data and the SNP location file can be used in the analysis. WARNING: when using your data .bim file as SNP location file, make sure that the SNP locations in the .bim file refer to the same human reference genome build version as the gene loca ...
The Biology and Evolution of Mammalian Y Chromosomes
... offered the only obvious avenue for study. Studies of human individuals carrying part but not all of the Y chromosome, combined with functional studies in mice, culminated in the establishment of SRY as the testis-determining gene on the mammalian Y chromosome in 1991 (5, 42, 54, 59). The second bio ...
... offered the only obvious avenue for study. Studies of human individuals carrying part but not all of the Y chromosome, combined with functional studies in mice, culminated in the establishment of SRY as the testis-determining gene on the mammalian Y chromosome in 1991 (5, 42, 54, 59). The second bio ...
Genome evolution
Genome evolution is the process by which a genome changes in structure (sequence) or size over time. The study of genome evolution involves multiple fields such as structural analysis of the genome, the study of genomic parasites, gene and ancient genome duplications, polyploidy, and comparative genomics. Genome evolution is a constantly changing and evolving field due to the steadily growing number of sequenced genomes, both prokaryotic and eukaryotic, available to the scientific community and the public at large.