SGD: Saccharomyces Genome Database.
... Sequence Similarity View and Stripe View. Pattern Matching, Sequence Similarity View and Stripe View are all programs created by SGD staff. Pattern Matching allows users to perform a variety of motif searches, using degenerate search sequences. Sequence Similarity View and Stripe View provide a visu ...
... Sequence Similarity View and Stripe View. Pattern Matching, Sequence Similarity View and Stripe View are all programs created by SGD staff. Pattern Matching allows users to perform a variety of motif searches, using degenerate search sequences. Sequence Similarity View and Stripe View provide a visu ...
Megatask 2 : Clustering of an unspecified set of gene lists
... that show more than 90% of proximity / overlap. The maximum cluster-size is four so rather low. • When comparing coincidence of genes over genelists it appears there are Fig.5 : cluster-size for clusters with three large clusters of genes that coincide 100%. 100% proximity-threshold in genesets Much ...
... that show more than 90% of proximity / overlap. The maximum cluster-size is four so rather low. • When comparing coincidence of genes over genelists it appears there are Fig.5 : cluster-size for clusters with three large clusters of genes that coincide 100%. 100% proximity-threshold in genesets Much ...
slide presentation
... A community is described by the abundances of species building it Local community is in relation wit a regional pool Introductions from pool occur with regular time step (say, 1 y) Between introductions, abundances are driven by L.-V. model ...
... A community is described by the abundances of species building it Local community is in relation wit a regional pool Introductions from pool occur with regular time step (say, 1 y) Between introductions, abundances are driven by L.-V. model ...
Population Genetics Outline Population Genetics Allele Frequency
... Mutation • Mutation – Any event that changes genetic structure • Mutation from A to a will lead freq(A) to decrease, freq(a) to increase. – Mutation rate is low in animals and plants (1 mutation in 100,000 genes per generation) ...
... Mutation • Mutation – Any event that changes genetic structure • Mutation from A to a will lead freq(A) to decrease, freq(a) to increase. – Mutation rate is low in animals and plants (1 mutation in 100,000 genes per generation) ...
Inheritance, Genes, and Chromosomes
... 1. Blending inheritance—gametes contain hereditary determinants that blend in the zygote. Offspring phenotypes are intermediate. 2. Particulate inheritance—hereditary determinants are distinct and remain intact at fertilization. ...
... 1. Blending inheritance—gametes contain hereditary determinants that blend in the zygote. Offspring phenotypes are intermediate. 2. Particulate inheritance—hereditary determinants are distinct and remain intact at fertilization. ...
iGenetics: A Molecular Approach, 3e (Russell/Bose)
... Comparison of the genomes of different dog breeds may therefore shed light on which genetic elements are responsible for the radically different developmental pathways of different dog breeds–a process that may represent a microcosm of species-level differentiation over evolutionary time. Skill: Con ...
... Comparison of the genomes of different dog breeds may therefore shed light on which genetic elements are responsible for the radically different developmental pathways of different dog breeds–a process that may represent a microcosm of species-level differentiation over evolutionary time. Skill: Con ...
to get the file - Chair of Computational Biology
... 1. Sequence the genome and assign functions to genes using protein sequence and structural similarities. Using primary sequence similarity of the H. salinarum proteins to characterized orthologs in other organisms left a significant fraction (38%) of ~2,400 putative protein-coding genes that could n ...
... 1. Sequence the genome and assign functions to genes using protein sequence and structural similarities. Using primary sequence similarity of the H. salinarum proteins to characterized orthologs in other organisms left a significant fraction (38%) of ~2,400 putative protein-coding genes that could n ...
Gold nanoparticle-mediated gene delivery induces immunity genes
... New nanotechnologies that deliver oligonucleotides or small interfering RNA into cells to regulate gene transcript and protein abundance are emerging. By conjugating antisense constructs to the surface of gold nanoparticles, for example, polynucleotide stability, binding properties and cellular upta ...
... New nanotechnologies that deliver oligonucleotides or small interfering RNA into cells to regulate gene transcript and protein abundance are emerging. By conjugating antisense constructs to the surface of gold nanoparticles, for example, polynucleotide stability, binding properties and cellular upta ...
Data mining and Knowledge discovery in Biomedical literature
... There was biology (~1800), and There were computers (~1920) ...
... There was biology (~1800), and There were computers (~1920) ...
Genes can be switched on and off by the protein CTCF
... Genes can be switched on and off by the protein CTCF Kristina Jonas The complex development of mammals requires that the majority of all genes can be switched off at any given time. Cell and tissue-specific inactivation is a characteristic feature of many developmentally regulated genes. Inactivatio ...
... Genes can be switched on and off by the protein CTCF Kristina Jonas The complex development of mammals requires that the majority of all genes can be switched off at any given time. Cell and tissue-specific inactivation is a characteristic feature of many developmentally regulated genes. Inactivatio ...
Extensions of the Laws of Inheritance
... chromosome has alleles for tall plants and red owers, and the other chromosome has genes for short plants and yellow owers, then when the gametes are formed, the tall and red alleles will tend to go together into a gamete and the short and yellow alleles will go into other gametes. These are calle ...
... chromosome has alleles for tall plants and red owers, and the other chromosome has genes for short plants and yellow owers, then when the gametes are formed, the tall and red alleles will tend to go together into a gamete and the short and yellow alleles will go into other gametes. These are calle ...
Several recent reports have suggested a relationship between
... evolving “best attempt” at circumventing the plethora of complex infertility problems plaguing the human population. On a daily basis, ART addresses such infertility problems (many of which were previously intractable) with great success. It is well past time to accept that such intervention is, lik ...
... evolving “best attempt” at circumventing the plethora of complex infertility problems plaguing the human population. On a daily basis, ART addresses such infertility problems (many of which were previously intractable) with great success. It is well past time to accept that such intervention is, lik ...
Linkage Mapping 2 3 – point linkage mapping One crossover Two
... (whether crossovers are really independent along chromosome or if one crossover reduces the probability of a nearby crossover), the number of crossovers can be estimated from the observed recombination frequency. • So, we are working backwards from the observed result (recombinations) to the unobser ...
... (whether crossovers are really independent along chromosome or if one crossover reduces the probability of a nearby crossover), the number of crossovers can be estimated from the observed recombination frequency. • So, we are working backwards from the observed result (recombinations) to the unobser ...
Pair-rule genes
... information, they regulate the expression of the remaining so-called "secondary" pairrule genes (fushi-tarazu, odd-skipped, paired, odd-paired, and sloppy-paired), which in turn play a more direct role in the establishment of segment-polarity gene expression. Pair-rule patterning, producing seven st ...
... information, they regulate the expression of the remaining so-called "secondary" pairrule genes (fushi-tarazu, odd-skipped, paired, odd-paired, and sloppy-paired), which in turn play a more direct role in the establishment of segment-polarity gene expression. Pair-rule patterning, producing seven st ...
Gene and Genome Sequencing
... FungiDB exercises – In one exercise we will use Fungi genomes because not enough oomycete data was available – In one exercise we will switch between FungiDB and EuPathDB to show extra func�ons not ...
... FungiDB exercises – In one exercise we will use Fungi genomes because not enough oomycete data was available – In one exercise we will switch between FungiDB and EuPathDB to show extra func�ons not ...
User Management
... Each time DNA gathers Inventory data it compares the current details against information already held on the server and if there are any differences they are recorded in the History. ...
... Each time DNA gathers Inventory data it compares the current details against information already held on the server and if there are any differences they are recorded in the History. ...
PPTX - National Ataxia Foundation
... SCAR17 (Turkey, Netherlands) SCAR20 (Portugal, Middle East) SCAR23 (Ireland, Egypt) ...
... SCAR17 (Turkey, Netherlands) SCAR20 (Portugal, Middle East) SCAR23 (Ireland, Egypt) ...
Quantitative and Single-Gene Perspectives on the Study of Behavior
... In its contemporary incarnations, the most commonly practiced form of quantitative genetics is quantitative trait locus (QTL) analysis. A QTL is a polymorphic locus that contains alleles with differential effects on the expression of a continuously distributed phenotypic trait. Usually it is detecte ...
... In its contemporary incarnations, the most commonly practiced form of quantitative genetics is quantitative trait locus (QTL) analysis. A QTL is a polymorphic locus that contains alleles with differential effects on the expression of a continuously distributed phenotypic trait. Usually it is detecte ...
Assaying … promoter activity
... …the plasmid integrated into the genome by homologous recombination with the nimB and ORF5468 gene. We tested the stability of the integrated plasmid via a true breeding experiment. In this experiment, recombinant cells were grown at the non-permissive temperature in the absence of antibiotic select ...
... …the plasmid integrated into the genome by homologous recombination with the nimB and ORF5468 gene. We tested the stability of the integrated plasmid via a true breeding experiment. In this experiment, recombinant cells were grown at the non-permissive temperature in the absence of antibiotic select ...
Lecture 9
... It is a group of remote islands in the south Atlantic Ocean, inbetween South Africa and South America (but closest to the former). It is a colony of Saint Helena which is 2173 kilometres to its north. This territory contains mostly Tristan da Cunha (the largest island in the territory - which is inh ...
... It is a group of remote islands in the south Atlantic Ocean, inbetween South Africa and South America (but closest to the former). It is a colony of Saint Helena which is 2173 kilometres to its north. This territory contains mostly Tristan da Cunha (the largest island in the territory - which is inh ...
DNA structure and replication_AP Bio
... DNA Replication and Repair 1.During DNA replication, base pairing enables existing DNA strands to serve as templates for new complementary strands 2. A large team of enzymes and other proteins carries out DNA replication 3. Enzymes proofread DNA during its replication and repair damage to existing ...
... DNA Replication and Repair 1.During DNA replication, base pairing enables existing DNA strands to serve as templates for new complementary strands 2. A large team of enzymes and other proteins carries out DNA replication 3. Enzymes proofread DNA during its replication and repair damage to existing ...
activator
... • When tryptophan is present, it binds to the trp repressor protein, which turns the operon off • The repressor is active only in the presence of its corepressor tryptophan; thus the trp operon is turned off (repressed) if tryptophan levels are ...
... • When tryptophan is present, it binds to the trp repressor protein, which turns the operon off • The repressor is active only in the presence of its corepressor tryptophan; thus the trp operon is turned off (repressed) if tryptophan levels are ...
Site-specific recombinase technology
Nearly every human gene has a counterpart in the mouse (regardless of the fact that a minor set of orthologues had to follow species specific selection routes). This made the mouse the major model for elucidating the ways in which our genetic material encodes information. In the late 1980s gene targeting in murine embryonic stem (ES-)cells enabled the transmission of mutations into the mouse germ line and emerged as a novel option to study the genetic basis of regulatory networks as they exist in the genome. Still, classical gene targeting proved to be limited in several ways as gene functions became irreversibly destroyed by the marker gene that had to be introduced for selecting recombinant ES cells. These early steps led to animals in which the mutation was present in all cells of the body from the beginning leading to complex phenotypes and/or early lethality. There was a clear need for methods to restrict these mutations to specific points in development and specific cell types. This dream became reality when groups in the USA were able to introduce bacteriophage and yeast-derived site-specific recombination (SSR-) systems into mammalian cells as well as into the mouse