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Principal Components Analysis
Principal Components Analysis

... placed into a matrix. This is where PCA becomes useful. PCA will find Eigenvectors and eigenvalues relevant to the data using a covariance matrix. Eigenvectors can be thought of as “preferential directions” of a data set, or in other words, main patterns in the data. For PCA on genes, an eigenvector ...
Pre-made tetracycline regulator (TetR) expression lentiviral
Pre-made tetracycline regulator (TetR) expression lentiviral

... that integrated with two copies of tetracycline regulator binding sequences. This modification does not change promoter’s constitutive expression status. The GOI (gene of interest) can be expressed in high level as regular promoter without any induction. However, optionally, lentiviral particles can ...
Lesson Plan - Colorado FFA
Lesson Plan - Colorado FFA

... dominant gene from on parent unites with the gamete carrying the dominant gene from the other parent, the offspring produced are homozygous dominant. If the gamete carrying the dominant gene from one parent unites with the gamete carrying the recessive gene form the other parent, the offspring are ...
A possible association between panic disorder
A possible association between panic disorder

SIGNATURES OF NATURAL SELECTION IN THE HUMAN GENOME
SIGNATURES OF NATURAL SELECTION IN THE HUMAN GENOME

Role for CCG-trinucleotide repeats in the pathogenesis of chronic
Role for CCG-trinucleotide repeats in the pathogenesis of chronic

... Chronic lymphocytic leukemia (CLL) is characterized by a clonal proliferation of mature B-lymphocytes increasing in incidence logarithmically with age in adults.1 Sporadic CLL may have a hereditary component because several studies report an elevated risk for hematologic malignancy2,3 and other canc ...
signatures of natural selection in the human
signatures of natural selection in the human

... doi:10.1038/nrg999 ...
Adaptive Evolution of Proteins Secreted during Sperm Maturation
Adaptive Evolution of Proteins Secreted during Sperm Maturation

... was greater than 1.1; 4) at least 1% of the codons belonged to this additional class of dN/dS; and 5) at least one codon showed significant evidence (P , 0.10) of positive selection (dN/dS . 1.1) in an FEL framework. As further quality control, we estimated pairwise dS between mouse and each of the ...
Lecture 3 - Montefiore Institute ULg
Lecture 3 - Montefiore Institute ULg

... traced to specific locations on the chromosomes and associated with particular traits.  They demonstrate polymorphism, which means that the genetic markers in different organisms of the same species are different.  A classic example of a genetic marker: the area of the DNA which codes for blood ty ...
Volume 11 - Número 6 - Novembro / Dezembro de 2001
Volume 11 - Número 6 - Novembro / Dezembro de 2001

... seen by electron microscopy as beaded strings. They subsequently may interact with other microfibrillar components into thread-like filaments which will give rise to macroaggregates with or without elastin(27). Fibrillin-1 and fibrillin-2 are encoded by different genes, FBN1 and FBN2, located at chr ...
Lesson Plan - Colorado FFA
Lesson Plan - Colorado FFA

... dominant gene from on parent unites with the gamete carrying the dominant gene from the other parent, the offspring produced are homozygous dominant. If the gamete carrying the dominant gene from one parent unites with the gamete carrying the recessive gene form the other parent, the offspring are ...
File
File

... • Genome lies within nucleus of cell Comprised of 22 pairs of chromosomes During mitosis all pairs are copied During meiosis only one member of each pair are copied Karyotype © 2007 Thomson - Wadsworth ...
Topic 10.1 PowerPoint
Topic 10.1 PowerPoint

... (Sunderland, MA: Sinauer Associates and W. H. Freeman & Company), 198. Used with permission. All rights reserved ...
Shedding the Myths - Pomeranian Club of Canada
Shedding the Myths - Pomeranian Club of Canada

... linked recessive inheritance, the gene is present on the X chromosome. in other genes in the Male dogs only have one X chromosome inherited from the mother. There- caused by a defect in patient have been fore a male cannot inherit the disease from the father, but can by a carrier a single non-Xident ...
A method for finding molecular signatures from gene expression data
A method for finding molecular signatures from gene expression data

... particular biological response.” (Rosenwald et al., 2002, N. Eng. J. Med., 346, p. 1942) Often used as independent variables to model clinically relevant information (cancer vs. healthy, survival time, etc). Provide insight into biological mechanisms and processes and have potential diagnostic use. ...
LAB 5: Breeding Bunnies - Ms Kim`s Biology Class
LAB 5: Breeding Bunnies - Ms Kim`s Biology Class

... 1." For instance, if you draw one brown and one white bean, place a tally mark in the chart under "Number of Ff individuals." 4. Continue drawing pairs of beans and recording the results in your chart until all beans have been selected and sorted. Place the "rabbits" into the appropriate cups: FF, F ...
15_Lecture_Stock
15_Lecture_Stock

... The Chromosomal Basis of Sex • In humans and other mammals, there are two varieties of sex chromosomes: a larger X chromosome and a smaller Y chromosome • Only the ends of the Y chromosome have regions that are homologous with corresponding regions of the X chromosome • The SRY gene on the Y chromo ...
Alpha -antitrypsin  alleles  in  patients  with ... emphysema,  detected  by  DNA  amplification ...
Alpha -antitrypsin alleles in patients with ... emphysema, detected by DNA amplification ...

... for detection of specific point-mutations and the specificlty is high. However, mistyping is possible when nonexpected point-mutations are present. A pointmutation at the site of hybridization with the probes will give rise to unstable binding of both probes, and a point-mutation at the hybridizatio ...
Detailed Genetic and Physical Map of the 3p
Detailed Genetic and Physical Map of the 3p

... location of the critical 3p region(s) harboring the target gene(s) had been hampered by the paucity of well-localized, widely available molecular probes. Recently, efforts to isolate and localize large num bers of 3p molecular probes have been undertaken (25-28). As the probe density on 3p increased ...
Myotonic dystrophy DM
Myotonic dystrophy DM

... Haploinsufficiency of DMPK -Early expression studies were consistent with the hypothesis that the mutation interfered with DMPK production, in that mRNA and protein levels were reduced in patient muscle and cell culture. -However, DMPK knockout mice showed only a very mild, late-onset myopathy with ...
Natural Selection, Infectious Transfer and the Existence Conditions
Natural Selection, Infectious Transfer and the Existence Conditions

... total conjugation rate is appropriately bounded to ensure that under the best of conditions the plasmid does not transfer at a rate high enough to overcome its costs of carriage. Similarly, we assume for simplicity that segregation does not generate viable plasmid-free cells, due to postsegregationa ...
Genetic Optimization of Electric Machines, a State of the Art Study.
Genetic Optimization of Electric Machines, a State of the Art Study.

... – to the extreme a probability of 0 for crossover and mutation would result in no selection pressure but also no useful search – crossover does not introduce new alleles to the population – when a solution starts to converge, effect of crossover starts to diminish – mutation introduce new alleles – ...
Daisy quorum drives for the genetic restoration of wild
Daisy quorum drives for the genetic restoration of wild

... cannot be located in cis to the nucleases might be placed in trans if they encode guide RNAs targeting the wild-type ribosomal genes and their own wild-type locus is targeted by the daisy elements in position B. Since there will be at least two CRISPR nuclease genes present, with one or more copy ad ...
PPT - Bruce Blumberg
PPT - Bruce Blumberg

... • how to do recombinant DNA manipulations • I may begin each lecture with discussion of an important technique – present a practical introduction to techniques • library construction and use • gene identification • functional analysis – point out some of the pitfalls of various methods and why certa ...
Increased carrier prevalence of deficient CYP2C9, CYP2C19 and
Increased carrier prevalence of deficient CYP2C9, CYP2C19 and

... and splicing defects. Deficient alleles have subfunctional enzymatic activity due to nucleotide substitutions resulting in amino acid changes in the protein, and these variants may manifest subnormal enzymatic activity for some drug substrates. The functional allele refers to the genetic wild-type, ...
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Site-specific recombinase technology



Nearly every human gene has a counterpart in the mouse (regardless of the fact that a minor set of orthologues had to follow species specific selection routes). This made the mouse the major model for elucidating the ways in which our genetic material encodes information. In the late 1980s gene targeting in murine embryonic stem (ES-)cells enabled the transmission of mutations into the mouse germ line and emerged as a novel option to study the genetic basis of regulatory networks as they exist in the genome. Still, classical gene targeting proved to be limited in several ways as gene functions became irreversibly destroyed by the marker gene that had to be introduced for selecting recombinant ES cells. These early steps led to animals in which the mutation was present in all cells of the body from the beginning leading to complex phenotypes and/or early lethality. There was a clear need for methods to restrict these mutations to specific points in development and specific cell types. This dream became reality when groups in the USA were able to introduce bacteriophage and yeast-derived site-specific recombination (SSR-) systems into mammalian cells as well as into the mouse
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