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Finding biologically relevant information using ADIOS
Finding biologically relevant information using ADIOS

... Chong had a presentation in CBB545 # on Tuesday Chong had a presentation # next Thursday Laura has a presentation # ThaiBinh has a presentation in CBB545 # ThaiBinh has a presentation today # today ThaiBinh has a presentation # Chong had a presentation # Hugo has a presentation in CBB545 today # Tha ...
13_lecture_meiosis
13_lecture_meiosis

... FERTILIZATION ...
The genomic landscape of meiotic crossovers and gene
The genomic landscape of meiotic crossovers and gene

... Figure 1. Experimental design and summary of recombination events within 62 recombinants. (A) 13 complete tetrads were generated by crossing qrt1 in a Col background to qrt1 in a Ler background, and then using single pollen tetrads from the F1 hybrids to fertilize a Cvi male sterile pollen receptor. ...
Genes and Genetic Testing in Hereditary Ataxias
Genes and Genetic Testing in Hereditary Ataxias

... less than 2 to over 100 fold, depending on the gene. The most common repeat expansions are CAG expansions. As CAG encodes glutamine, these are also referred to as a polyglutamine or polyQ repeats, as these repeats form strings of glutamines (Q) in the coding region. There are currently seven known A ...
A Study on Swarm Intelligence Techniques in Intrusion Detection
A Study on Swarm Intelligence Techniques in Intrusion Detection

... Among the discovered rules the best one is selected and augmented to the discovered rules. This is done iteratively until a large base of rules is constructed which can be later on used in test sets as criteria for classifying network connections into intrusive or normal. The experimental results sh ...
Full Text - Digital Access to Scholarship at Harvard
Full Text - Digital Access to Scholarship at Harvard

Two concepts of natural selection and their explanatory powers
Two concepts of natural selection and their explanatory powers

... informative definition of replication, which is also quite weak. They claim that any entity can count as a replicator that can come to existence "only if there is a pre-existing structure of the same kind in the vicinity" (Maynard Smith-Szathmary 1995: 41). In other words, replicator is "an entity t ...
RECIPROCAL CHROMOSOME TRANSLOCATIONS IN 437
RECIPROCAL CHROMOSOME TRANSLOCATIONS IN 437

Genetics of mammalian meiosis: regulation, dynamics and impact
Genetics of mammalian meiosis: regulation, dynamics and impact

... axial elements (AEs) from cohesin proteins (for example, REC8 and structural maintenance of chromosomes 1B (SMC1B)) and synaptonemal complex (SC)-specific proteins, such as SYCP3 and SYCP2. The chromatids experience genetically programmed double-strand DNA breaks (induced by SPO11), which provide th ...
Optimizing selection for quantitative traits with information on an
Optimizing selection for quantitative traits with information on an

... generations when information on a quantitative trait locus (major gene) is available were developed to investigate and optimize response to selection in mixed inheritance models. Deterministic models with and without gametic phase disequilibrium between the major gene and other genes that affect the ...
Unifying Instance-Based and Rule
Unifying Instance-Based and Rule

... 1992; see also Michalski & Tecuci, 1993). The expression “empirical multi-strategy learning” will therefore be used to distinguish the case where all the components are empirical. Ideally, an empirical multi-strategy learning algorithm would always perform as well as the best of its “parents,” obvia ...
Automatic conversion of sentence-end expressions for utterance
Automatic conversion of sentence-end expressions for utterance

... event-denoting expressions are presented as corresponding to real-world situations, situations that have not occurred, or situations of uncertain status (Saurı́ and Pustejovsky, 2007). According to them, event factuality is impacted by polarity (positive vs. negative) and degree of certainty of what ...
Dia 1
Dia 1

... very large expansions of repeats outside coding sequences ...
PolyP | a polytypic programming language extension
PolyP | a polytypic programming language extension

... in the near future. In the future PolyP will be able to handle mutual recursive datatypes with an arbitrary number of type arguments and in which function spaces may occur. ...
Introduction - Department of Computer Science
Introduction - Department of Computer Science

... New zygote rapidly divides etc creating many cells all with the same genetic contents Although all cells contain the same genes, depending on, for example where they are in the organism, they will behave differently This process of differential behaviour during development is called ontogenesis All ...
Molecular Evolution, Functional Variation, and Proposed
Molecular Evolution, Functional Variation, and Proposed

... Taxonomic Sampling and Collection The representation of taxa in different analyses is summarized in table 2. Our goal was to capture the breadth of diversity within Sicariidae, guided by previous phylogenetic work (Binford et al. 2008, fig. 1). To do this, we include at least one representative of e ...
Gene Section KLK4 (kallikrein-related peptidase 4) Atlas of Genetics and Cytogenetics
Gene Section KLK4 (kallikrein-related peptidase 4) Atlas of Genetics and Cytogenetics

... expression. It has also been shown that KLK4 specific antibodies can be detected in sera from prostate cancer patients. In prostate cancer cells, KLK4 has been shown to be up-regulated by androgens at both the mRNA and protein level. In two expression studies using Northern blot analysis, KLK4 mRNA ...


... The Atlas of Genetics and Cytogenetics in Oncology and Haematology is a peer reviewed on-line journal in open access, devoted to genes, cytogenetics, and clinical entities in cancer, and cancer-prone diseases. It presents structured review articles (“cards”) on genes, leukaemias, solid tumours, canc ...
[pdf]
[pdf]

Gene Section HDAC2 (histone deacetylase 2) Atlas of Genetics and Cytogenetics
Gene Section HDAC2 (histone deacetylase 2) Atlas of Genetics and Cytogenetics

... the desacetylation of lysine residues present at the N-terminal tail of histone proteins (H2A, H2B, H3 and H4). HDAC2 heterodimerise with HDAC1, but the heterodimer cannot bind to DNA, so they have to be recruited by transcription factors such as YY1, SP1/SP3, the tumor suppressor genes p53 and BRCA ...
The mitochondrial genome of the soybean cyst nematode
The mitochondrial genome of the soybean cyst nematode

... infest a number of indicator soybean cultivars. Genetic approaches for distinguishing H. glycines populations could provide a means of rapidly distinguishing these types. However, such genetic markers have not yet been developed. The mitochondrial genome of H. glycines may provide such genetic marke ...
::: Gene Set Enrichment Analysis - GSEA
::: Gene Set Enrichment Analysis - GSEA

... into a single gene vector, which is identified by its HUGO gene symbol. In this case, you are using HUGO gene symbols for the analysis. The gene sets that you use for the analysis must use HUGO gene symbols to identify the genes in the gene sets. 2. Choose false to use your expression dataset "as is ...
Natural Genetic Variation Shapes Root System Responses
Natural Genetic Variation Shapes Root System Responses

ch 11_4
ch 11_4

... frequency of crossing-over between genes during meiosis might be a clue to the genes’ locations. Sturtevant reasoned that the farther apart two genes were on a chromosome, the more likely it would be that a crossover event would occur between them. If two genes are close together, then crossovers be ...
The Breast Cancer Polygene and Longevity Genes: The Implications
The Breast Cancer Polygene and Longevity Genes: The Implications

... The Punnet square for parental genotypes AaBbCc × AaBbCc. The 23 possible gamete formations for the parents are shown along the top and down the left. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . The matrix for parental polygenotypes AaBbCc×AaBbCc showing the genotypes’ influence on can ...
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Gene expression programming

In computer programming, gene expression programming (GEP) is an evolutionary algorithm that creates computer programs or models. These computer programs are complex tree structures that learn and adapt by changing their sizes, shapes, and composition, much like a living organism. And like living organisms, the computer programs of GEP are also encoded in simple linear chromosomes of fixed length. Thus, GEP is a genotype-phenotype system, benefiting from a simple genome to keep and transmit the genetic information and a complex phenotype to explore the environment and adapt to it.
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