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F215: Control, Genome and the Environment
F215: Control, Genome and the Environment

... Homeobox sequences control the development of body plans in plants, animals and fungi in similar ways. Homeotic genes contain homeobox sequences (a length of DNA which codes for approximately 60 amino acids), which code for the homeodomain, which acts as a transcription factors in developmental gene ...
KOD -Plus- Mutagenesis Kit
KOD -Plus- Mutagenesis Kit

... In this kit, template plasmids are digested through treatment with the restriction enzyme Dpn I. The template plasmid should be methylated, since Dpn I recognizes the Gm6ATC (m6 methylated) site. The “GATC” recognition sites of plasmid DNA purified from ordinary host cells (e.g., E. coli JM109 or DH ...
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Supplementary Figure Legends - Word file
Supplementary Figure Legends - Word file

... gene (control) and the episomal hdhfr gene. The positions of restriction sites are shown above each plasmid map. The lengths of the detected fragments are indicated to the right of the Southern blots. The average plasmid copy number per parasite was determined by densitometry comparing the signal s ...
Biotechnology Lectures (PowerPoints)
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Note 8.2 - DNA Sequencing
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Explain what genetic recombination is, why it is important and ho it

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ecole doctorale des sciences de la vie et de la sante
ecole doctorale des sciences de la vie et de la sante

... and North America, we have isolated and characterized 23 different viruses of the Archaea. The viruses have double-stranded and single-stranded DNA genomes and exceptionally diverse morphotypes, including spindle-shaped, two-tailed, bottle-shaped, ovoid, coil-shaped forms, which differ dramatically ...
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CHAPTER 27

... Among pathogenic bacteria, gram-negative species are generally more deadly than gram-positive species. ○ The lipopolysaccharides on the walls of gram-negative bacteria are often toxic, and the outer membrane protects the pathogens from the defenses of their hosts. ○ Gram-negative bacteria are common ...
EDVOTEK® Professional Development Workshop Literature
EDVOTEK® Professional Development Workshop Literature

... Avery and his colleagues purified DNA, RNA and protein from a virulent strain of S. pneumonia to determine which was responsible for transformation. Each component was mixed each with a non-pathogenic strain of bacteria. Only those recipient cells exposed to DNA became pathogenic. These transformati ...
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DNA Profiling - Miss Jan`s Science Wikispace

... production of animal derived insulin. These factors led researchers to consider synthesising Humulin by inserting the insulin gene into a suitable vector, the E. coli bacterial cell, to produce an insulin that is chemically identical to its naturally produced counterpart through Gene Cloning. (a) ...
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... Mutant 1 will encode a truncated protein. The codon corresponding to the amino acid 302 in the PKA transcript of this mutant is a stop codon. Thus the PKA protein produced by mutant 1 will only be 301 amino acids long instead of 305. In comparison, the mutation in mutant 2 is a silent mutation and h ...
chapter 8 and 9
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... Phenotype - the observable characteristics of an organism Genotype - the sequence of nucleotides in the DNA of an organism Wild type - characteristics similar to the organism as it occurs in nature. Prototroph - requires the same nutrients as the wild type. Auxotroph - a strain that has lost the abi ...
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pSAT vectors: a modular series of plasmids for autofluorescent

... Assembly of several pSAT expression cassettes into single plasmids For expression of two autofluorescently-tagged proteins from a single plasmid, we first produced pSAT1-ECFP-C1-VIP1 by cloning the VIP1 ORF as a SalI-BamHI fragment from pSAT6EGFP-C1-VIP1 into pSAT1-ECFP-C1. The ECFP-VIP1 expression ...
Assaying … promoter activity
Assaying … promoter activity

... nimB and ORF5468 gene. A true breeding experiment of potential knockouts showed that the rate of plasmid loss after integration is very low. Either explain the “true breeding experiment” fully in Materials and Methods or include more detail here. …the plasmid integrated into the genome by homologous ...
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DNA cloning by homologous recombination in Escherichia coli

... includes the chloramphenicol resistance gene (example 3). In example 1, a part of the lac operon was ...
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... The Harlow laboratory at Harvard Medical School would like to automate their plasmid DNA purification process to increase throughput, improve purity, and reduce cost. Our focus was to design and demonstrate the feasibility of an improved single unit operation which meets the purity and yield require ...
DNA - Our eclass community
DNA - Our eclass community

... Many bacteria however, also contain plasmids naturally ...
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Plasmid



A plasmid is a small DNA molecule within a cell that is physically separated from a chromosomal DNA and can replicate independently. They are most commonly found in bacteria as small, circular, double-stranded DNA molecules; however, plasmids are sometimes present in archaea and eukaryotic organisms. In nature, plasmids often carry genes that may benefit the survival of the organism, for example antibiotic resistance. While the chromosomes are big and contain all the essential information for living, plasmids usually are very small and contain only additional information. Artificial plasmids are widely used as vectors in molecular cloning, serving to drive the replication of recombinant DNA sequences within host organisms.Plasmids are considered replicons, a unit of DNA capable of replicating autonomously within a suitable host. However, plasmids, like viruses, are not generally classified as life. Plasmids can be transmitted from one bacterium to another (even of another species) via three main mechanisms: transformation, transduction, and conjugation. This host-to-host transfer of genetic material is called horizontal gene transfer, and plasmids can be considered part of the mobilome. Unlike viruses (which encase their genetic material in a protective protein coat called a capsid), plasmids are ""naked"" DNA and do not encode genes necessary to encase the genetic material for transfer to a new host. However, some classes of plasmids encode the conjugative ""sex"" pilus necessary for their own transfer. The size of the plasmid varies from 1 to over 200 kbp, and the number of identical plasmids in a single cell can range anywhere from one to thousands under some circumstances.The relationship between microbes and plasmid DNA is neither parasitic nor mutualistic, because each implies the presence of an independent species living in a detrimental or commensal state with the host organism. Rather, plasmids provide a mechanism for horizontal gene transfer within a population of microbes and typically provide a selective advantage under a given environmental state. Plasmids may carry genes that provide resistance to naturally occurring antibiotics in a competitive environmental niche, or the proteins produced may act as toxins under similar circumstances, or allow the organism to utilize particular organic compounds that would be advantageous when nutrients are scarce.
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