Genome Analysis of Cyanobacteria
... still uncertain, cyanobacteria are believed to be genetically related to gram-positive bacteria. Cyanobacteria are capable of photosynthesis but are distinct from other photosynthetic bacteria, such as purple and green bacteria, in that they utilize H2O as an electron donor and produce oxygen. Strik ...
... still uncertain, cyanobacteria are believed to be genetically related to gram-positive bacteria. Cyanobacteria are capable of photosynthesis but are distinct from other photosynthetic bacteria, such as purple and green bacteria, in that they utilize H2O as an electron donor and produce oxygen. Strik ...
Hemophilia B (F9) Sequencing and Deletion/Duplication
... • Hemophilia B is not clinically distinguishable from hemophilia A • Diagnosis of hemophilia B is established by deficiency of factor IX coagulation activity o Lower activity levels correspond with earlier age of diagnosis and higher frequency of bleeding episodes • First-line testing in most indivi ...
... • Hemophilia B is not clinically distinguishable from hemophilia A • Diagnosis of hemophilia B is established by deficiency of factor IX coagulation activity o Lower activity levels correspond with earlier age of diagnosis and higher frequency of bleeding episodes • First-line testing in most indivi ...
Supplementary Table 2 (doc 106K)
... Legendre A, Miao X-X, Da Lage J-L, Wicker-Thomas C (2008). Evolution of a desaturase involved in female pheromonal cuticular hydrocarbon biosynthesis and courtship behavior in Drosophila. Insect Biochem Mol Biol 38(2): 244-255. Rice AH, Duffy JB (2001). Characterization of baldspot, a putative gene ...
... Legendre A, Miao X-X, Da Lage J-L, Wicker-Thomas C (2008). Evolution of a desaturase involved in female pheromonal cuticular hydrocarbon biosynthesis and courtship behavior in Drosophila. Insect Biochem Mol Biol 38(2): 244-255. Rice AH, Duffy JB (2001). Characterization of baldspot, a putative gene ...
Myotonic dystrophy DM
... to extensions of tandem repeats above a critical size. -Yet the theories as to how large repeat arrays can cause such highly variable diseases are unresolved. ...
... to extensions of tandem repeats above a critical size. -Yet the theories as to how large repeat arrays can cause such highly variable diseases are unresolved. ...
Gene Expression Profiles and Microarray Data Analysis - BIDD
... • Cells are of many different types (blood, skin, nerve), but all arose from a single cell (the fertilized egg) • Each* cell contains a complete copy of the genome (the program for making the organism), encoded in DNA. ...
... • Cells are of many different types (blood, skin, nerve), but all arose from a single cell (the fertilized egg) • Each* cell contains a complete copy of the genome (the program for making the organism), encoded in DNA. ...
Document
... the occurrence of one crossover tends to inhibit additional crossovers in the same region of the chromosome, and so double crossovers are less frequent than expected. • The degree to which one crossover interferes with additional crossovers in the same region is termed the interference. To calculate ...
... the occurrence of one crossover tends to inhibit additional crossovers in the same region of the chromosome, and so double crossovers are less frequent than expected. • The degree to which one crossover interferes with additional crossovers in the same region is termed the interference. To calculate ...
1 DNA was extracted from blood sample ... San Diego, CA, USA). DNA concentration and quality was...
... Assay the signature of selection: the fixation index (Fst) HapMap Phase II samples include 60 Utah residents with ancestry from northern and western Europe (CEU), 45 Han Chinese in Beijing (CHB), 45 Japanese in Tokyo (JPT), and 60 Yoruba in Ibadan, Nigeria (YRI) were included. We pooled the data of ...
... Assay the signature of selection: the fixation index (Fst) HapMap Phase II samples include 60 Utah residents with ancestry from northern and western Europe (CEU), 45 Han Chinese in Beijing (CHB), 45 Japanese in Tokyo (JPT), and 60 Yoruba in Ibadan, Nigeria (YRI) were included. We pooled the data of ...
Tutorial - Ensembl
... An Ensembl gene may have multiple transcripts reflecting alternative splicing, in this case the EPO gene only shows one transcript in Ensembl. ...
... An Ensembl gene may have multiple transcripts reflecting alternative splicing, in this case the EPO gene only shows one transcript in Ensembl. ...
Lec-GenomeAllignment2010
... Figure 1. The difference between positional homology alignment and glocal alignment. Three example linear genomes are broken into genes labeled A,B,C,D, and R. R is a multicopy (repetitive) gene, with different copies labeled using numeric subscripts. Each copy of R is assumed to be identical in se ...
... Figure 1. The difference between positional homology alignment and glocal alignment. Three example linear genomes are broken into genes labeled A,B,C,D, and R. R is a multicopy (repetitive) gene, with different copies labeled using numeric subscripts. Each copy of R is assumed to be identical in se ...
Bioinfogrid_EGAAP
... Data source: Gene Ontology (GO) and gene association 18800 GO-terms, ~ 1.3M gene products, 7.1M associations Selection: only well described gene products are considered (>15 go terms) (≈1 million gene products) Processing: one gene against all others 1 CPU hour ...
... Data source: Gene Ontology (GO) and gene association 18800 GO-terms, ~ 1.3M gene products, 7.1M associations Selection: only well described gene products are considered (>15 go terms) (≈1 million gene products) Processing: one gene against all others 1 CPU hour ...
- CSHL Institutional Repository
... data, presented by category. The central panel shows that we are looking at a Sequence Feature of Type ‘gene’. The score in this case is that provided by Genoscope’s automated annotation (14). For sequence features of type ‘match’, i.e. for UniProt matches, it is the match score. All names and synon ...
... data, presented by category. The central panel shows that we are looking at a Sequence Feature of Type ‘gene’. The score in this case is that provided by Genoscope’s automated annotation (14). For sequence features of type ‘match’, i.e. for UniProt matches, it is the match score. All names and synon ...
View PDF - CiteSeerX
... coding for 30 transfer RNAs, 4 ribosomal RNAs and 78 proteins. One pseudogene (c-infA) and one pseudo-ycf (c-ycf15) were identified. The chloroplast genome of E. globulus is essentially co-linear with that of another hardwood tree species, Populus trichocarpa, except that the latter lacks rps16 and r ...
... coding for 30 transfer RNAs, 4 ribosomal RNAs and 78 proteins. One pseudogene (c-infA) and one pseudo-ycf (c-ycf15) were identified. The chloroplast genome of E. globulus is essentially co-linear with that of another hardwood tree species, Populus trichocarpa, except that the latter lacks rps16 and r ...
1 Characterization of the p.Q189X nonsense mutation in dpy
... analyzing mutant phenotypes in C. elegans in forward genetic experimentation are therefore highly applicable in analyzing and possibly treating human diseases. One of the most important structural component in nematodes, such as C. elegans, is collagen. C. elegans has over 100 genes that encode for ...
... analyzing mutant phenotypes in C. elegans in forward genetic experimentation are therefore highly applicable in analyzing and possibly treating human diseases. One of the most important structural component in nematodes, such as C. elegans, is collagen. C. elegans has over 100 genes that encode for ...
Predicting TF affinities to Promoters of tissue specific genes
... strength. Assessing the Pearson correlation between PET size and 〈N〉 yielded a low but highly significant correlation of 0.184. This value is smaller than expected based on the very successful ranking. The reason for this lies in part in a group of PET clusters that are composed of centromeric and t ...
... strength. Assessing the Pearson correlation between PET size and 〈N〉 yielded a low but highly significant correlation of 0.184. This value is smaller than expected based on the very successful ranking. The reason for this lies in part in a group of PET clusters that are composed of centromeric and t ...
The evolutionary history of the stearoyl
... genome [21]. As a consequence, numerous gene families have specifically expanded up to four copies in the vertebrate lineage. An extra genome duplication in teleosts (3R) [22] contributed further to gene number increase. With respect to the SCD gene family, while the two SCD1 teleost isoforms have c ...
... genome [21]. As a consequence, numerous gene families have specifically expanded up to four copies in the vertebrate lineage. An extra genome duplication in teleosts (3R) [22] contributed further to gene number increase. With respect to the SCD gene family, while the two SCD1 teleost isoforms have c ...
length of exons and introns in genes of some human chromosomes
... number of introns in genes and a ratio of exon and intron length varied for different organisms (Duetsch, Long, 1999; Ivashchenko, Atambaeva, 2004). The relationship between exon and intron lengths that depend on number of introns in genes and gene density of DNA region in some chromosomes of H. sap ...
... number of introns in genes and a ratio of exon and intron length varied for different organisms (Duetsch, Long, 1999; Ivashchenko, Atambaeva, 2004). The relationship between exon and intron lengths that depend on number of introns in genes and gene density of DNA region in some chromosomes of H. sap ...
ParameciumDB - Nucleic Acids Research
... Every page of ParameciumDB contains a top row of navigation tabs (Home, Search, Gbrowse, Blast, Tools, Help) and a sidebar. The sidebar on the home page (and some information pages) contains internal and external links for community news, downloads and information about specific topics such as the g ...
... Every page of ParameciumDB contains a top row of navigation tabs (Home, Search, Gbrowse, Blast, Tools, Help) and a sidebar. The sidebar on the home page (and some information pages) contains internal and external links for community news, downloads and information about specific topics such as the g ...
Dragon Genetics
... Assume that the wing, fire-breathing and fang genes are so close together on Chromosome 1 that there is no crossing over within this region of the chromosome. ...
... Assume that the wing, fire-breathing and fang genes are so close together on Chromosome 1 that there is no crossing over within this region of the chromosome. ...
Hogart A, Leung KN, Wang NJ, Wu DJ, Driscoll J
... 13 dosage. Our findings demonstrate different epigenetic outcomes of the two brain samples and suggest that the imbalance of 15q11–13 dosage can disrupt normal parental homologue pairing, DNA methylation patterns, and gene expression patterns within 15q11–13. ...
... 13 dosage. Our findings demonstrate different epigenetic outcomes of the two brain samples and suggest that the imbalance of 15q11–13 dosage can disrupt normal parental homologue pairing, DNA methylation patterns, and gene expression patterns within 15q11–13. ...
Copy-number variation
Copy-number variations (CNVs)—a form of structural variation—are alterations of the DNA of a genome that results in the cell having an abnormal or, for certain genes, a normal variation in the number of copies of one or more sections of the DNA. CNVs correspond to relatively large regions of the genome that have been deleted (fewer than the normal number) or duplicated (more than the normal number) on certain chromosomes. For example, the chromosome that normally has sections in order as A-B-C-D might instead have sections A-B-C-C-D (a duplication of ""C"") or A-B-D (a deletion of ""C"").This variation accounts for roughly 13% of human genomic DNA and each variation may range from about one kilobase (1,000 nucleotide bases) to several megabases in size. CNVs contrast with single-nucleotide polymorphisms (SNPs), which affect only one single nucleotide base.