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P3- Biochemical Processes
P3- Biochemical Processes

... amount of substrate present in a reaction can limit the amount of product produced.  More substrate will result in more product until all enzymes are working at their maximum capacity (enzyme saturation) ...
Genes required for Lactococcus garvieae survival in a fish host
Genes required for Lactococcus garvieae survival in a fish host

... Despite the importance of this syndrome, there is little information about the precise pathogenic mechanisms by which this bacterium is able to defeat the host defences and cause disease. Up to now, it has only been established that virulence of this bacterium is, in part, dependent upon its ability ...
Amino Acid Sequences containing Cysteine or Cystine Residues in
Amino Acid Sequences containing Cysteine or Cystine Residues in

... by subtilisin (Ottesen 1958) which cleaves relatively few peptide bonds and releases only small molecular weight peptides (Ottesen and Wollen berger 1952). It also enables dissociation in acid-urea solution, of a 33-residue fragment (Smith 1968) called plakalbumin S-peptide that contains two of the ...
Regulation of pyruvate, orthophosphate dikinase by ADP
Regulation of pyruvate, orthophosphate dikinase by ADP

... enzyme activity and phosphorylatability (Table 2). Alternatively, the inactivation mechanism may also include a steric component in addition to an electrostatic one since substitution of Thr by Tyr or Phe (but not Val), two neutral amino acids with bulky side chains, also dramatically inhibits dikin ...
Correlations between the Amino Acid and Nucleotide Composition
Correlations between the Amino Acid and Nucleotide Composition

... less convincing; there are reports (Clark et al. I965; van Ravenswaay-Claasen et aL I967) that some plant virus nucleic acids, when put into Escherischia coli cell-free protein-producing systems (Nirenberg & Matthaei, I960, induce the formation of proteins like those produced in the host plant. Thes ...
Analysis of Binary Relations and Hierarchies of Enzymes in the
Analysis of Binary Relations and Hierarchies of Enzymes in the

... by KEGG are helpful for predicting and checking functional assignments of newly determined genes. In this paper, we have demonstrated how basic manipulations of binary relations and hierarchies of enzymes are used in the pathway analysis. Since the systematic analysis of reaction pathways is a new s ...
draft safety assessment report - Food Standards Australia New
draft safety assessment report - Food Standards Australia New

... FSANZ is responsible for developing, varying and reviewing standards and for developing codes of conduct with industry for food available in Australia and New Zealand covering labelling, composition and contaminants. In Australia, FSANZ also develops food standards for food safety, maximum residue l ...
Title: Author - Department of Biochemistry and Molecular Biology
Title: Author - Department of Biochemistry and Molecular Biology

... Human proteins are built up by 20 different amino acids (Figure 1). These amino acids commonly found in proteins as residues have L-configuration (except glycine) and are α-amino acids (except proline, which is imino acid). All of these amino acid contains a carboxyl-group and an amino group attache ...
Dynamics of Plasmodium falciparum enoyl‐ACP reductase and
Dynamics of Plasmodium falciparum enoyl‐ACP reductase and

... the double bond of ACP-bound fatty acids (between C2 and C3 of enoyl-ACP5; see Fig. 1 in Ref. 2). This reduction converts a trans-2-enoyl-ACP to acyl-ACP, with NADH serving as the reductant (sometimes also referred to as a coenzyme or cofactor).2 In the process of elongation, a growing fatty acid ge ...
Fatty acid productivity of Scenedesmus obliquus under nitrogen
Fatty acid productivity of Scenedesmus obliquus under nitrogen

...  The protein contents of all the three ...
This Article Abstract Full Text (PDF) Alert me when this article is cited
This Article Abstract Full Text (PDF) Alert me when this article is cited

... systems, the Wzc homologue consists of two separate polypeptides. One protein contains the two transmembrane domains and the periplasmic loop (corresponding to the Wzc N terminus), while the other protein corresponds to the C terminus and contains the Walker A ATP-binding motif as well as the C-term ...
T - Florida Tech Department of Computer Sciences
T - Florida Tech Department of Computer Sciences

... Basic Concepts of Molecular Biology Nucleic Acids – Nucleic Acids encode information necessary to produce proteins They are responsible for passing recipe to subsequent generations. 2 types of nucleic acids present in living organisms, RNA (ribonucleic acid) DNA (deoxyribonucleic acid). ...
Ecological and molecular investigations of cyanotoxin production
Ecological and molecular investigations of cyanotoxin production

... methods and toxin analyses employed by the various laboratories. Toxins (or toxicity) have commonly been measured via mouse bioassays, activity inhibition assays (for microcystin and nodularin) or HPLC. These methods cannot distinguish between all the di¡erent chemical isomers of the toxins. Structu ...
MSAs, SSPs, DBSs and a PHD
MSAs, SSPs, DBSs and a PHD

... K-nearest neighbour Sequence fragments from database of known structures (exemplars) ...
Enzymes
Enzymes

... process until more enzyme can be made. The availability of cofactors also dictate enzyme action. Too little cofactors will slow enzyme action until more cofactors are added. An influx of competitive or non-competitive inhibitors will not necessarily slow the enzyme process, but will slow the amount ...
D. Tetracyclines
D. Tetracyclines

...  Are bacteriostatic antibiotics having broad spectrum ...
Self-Subunit Swapping Occurs in Another Gene Type of Cobalt
Self-Subunit Swapping Occurs in Another Gene Type of Cobalt

... AKTA purifier (GE Healthcare UK Ltd.). Potassium phosphate buffer (KPB) (10 mM, pH 7.5), containing 0.5 mM dithiothreitol (DTT), was used in all purification steps. Cell extract preparation was performed as previously described. Centrifugation was conducted for 20 min at 180006g. NHase was partially ...
METABOLIC DISEASES
METABOLIC DISEASES

ch24a_wcr
ch24a_wcr

... Institute Of Medicine (USA), 2002/2005, for adults. Recommended daily protein intake per kg is higher for children & pregnant & lactating women. ...
Document
Document

... a. Proline is converted to the citric acid cycle intermediate α-ketoglutarate. The reactions in the remaining part of the citric acid cycle from α-ketoglutarate to oxaloacetate produce two NADH, one GTP, and one FADH2. The two NADH provide five ATP, one GTP provides one ATP, and one FADH2 provides 1 ...
Dreze et al, Methods Enzymol 2010
Dreze et al, Methods Enzymol 2010

... Systematic mapping of protein–protein, protein–DNA, protein–RNA, and protein–metabolite interactions at the scale of the whole proteome can advance understanding of interactome networks with applications ranging from single protein functional characterization to discoveries on local and global syste ...
User`s Guide - Structural Bioinformatics Group
User`s Guide - Structural Bioinformatics Group

Enzyme
Enzyme

... catalysts (eg mRNA translation) - Enzymes differ from chemical catalysts in reaction rate, reaction conditions, reaction specificity, and regulatory control - The unique physical and chemical properties of the active site limit an enzyme’s activity to specific substrates and reactions - Enzymes may ...
Topic guide 1.2: Enzymes
Topic guide 1.2: Enzymes

... that allow reactions to occur many times faster than uncatalysed reactions. Enzymes act on specific molecules called substrates. These substrate molecules bind to a region of the enzyme known as the active site. The specificity of the enzyme is due to the fact that the substrate and active site have ...
Cell-Free Phospholipid Biosynthesis by Gene
Cell-Free Phospholipid Biosynthesis by Gene

... PURE system and be incorporated in the membrane of liposomes we then explored the potential of mass spectrometry (MS) combined with liquid chromatography (LC) to detect the products of the GPAT and LPAAT enzymatic reactions in a background of the lipids comprising the liposomes and to quantify their ...
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Proteolysis



Proteolysis is the breakdown of proteins into smaller polypeptides or amino acids. Uncatalysed, the hydrolysis of peptide bonds is extremely slow, taking hundreds of years. Proteolysis is typically catalysed by cellular enzymes called proteases, but may also occur by intra-molecular digestion. Low pH or high temperatures can also cause proteolysis non-enzymatically.Proteolysis in organisms serves many purposes; for example, digestive enzymes break down proteins in food to provide amino acids for the organism, while proteolytic processing of a polypeptide chain after its synthesis may be necessary for the production of an active protein. It is also important in the regulation of some physiological and cellular processes, as well as preventing the accumulation of unwanted or abnormal proteins in cells. Consequently, dis-regulation of proteolysis can cause diseases, and is used in some venoms to damage their prey.Proteolysis is important as an analytical tool for studying proteins in the laboratory, as well as industrially, for example in food processing and stain removal.
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