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Molecular bases of Down syndrome: differential gene
Molecular bases of Down syndrome: differential gene

... Until now, there are no available data on the metabolic effects of the three copies of the CBS gene combined to polymorphisms of genes of the sulfur amino acid and folate pathway in patients with DS. An imbalance of the cell redox activity was suggested as another key player in DS pathogenesis. In f ...
Warren, ST and Nelson, DL: Trinucleotide repeat expansions in neurological disease. Current Opinion in Neurobiology 3:752-759 (1993).
Warren, ST and Nelson, DL: Trinucleotide repeat expansions in neurological disease. Current Opinion in Neurobiology 3:752-759 (1993).

... expanding trinucleotide repeats. However, much remains to be understood, in particular the mechanisms responsible for this unprecedented mutational change. Below are short descriptions of the genetic diseases currently recognized to exhibit these mutations and what is known about each trinucleotide ...
Phylogenetic Portrait of the Saccharomyces cerevisiae Functional
Phylogenetic Portrait of the Saccharomyces cerevisiae Functional

... By combining publicly available data for yeast gene annotation (www. yeastgenome.org) and for ortholog prediction (www.orthomcl.org), we created a clustered map of the yeast genome based on gene conservation. After organizing the data so that yeast genes with similar patterns of gene conservation we ...
Mucopolysaccharides
Mucopolysaccharides

... non-isotopic  Used for testing for  B-thalassaemia Cystic Fibrosis alpha-1-antitrysin sickle-cell anaemia Phenylketonuria Apolipoprotein E, etc ...
Fifty Years Ago: The Neurospora Revolution
Fifty Years Ago: The Neurospora Revolution

... Beadle-Tatum paper were twofold. First, the authors introduced what was for most geneticists a new kind of experimental organism-a microorganism that was ideally suited for classical genetic studies, but which differed from the classical organisms in that its nutritional requirements were explicitly ...
R - Genetics
R - Genetics

... The technical procedure for measuring the relative frequency of SIII-N and SIII-2 transformants in a reaction from which both types may appear (reactions 10 or 11) is somewhat complicated. The complication is due to the necessity of providing in the reaction mixture antibodies against the untransfor ...
Cytogenetic and Molecular Delineation of a Region of Chromosome
Cytogenetic and Molecular Delineation of a Region of Chromosome

... origin of each YAC clone on 7q was confirmed by hybridization to normal metaphase cells.23These studies showed that both the proximal and distal breakpoints were heterogeneous at the molecular level. YAC yWSS1668 and all clones centromeric of this YAC were proximal to the commonly deleted segment an ...
Full Text  - Genes | Genomes | Genetics
Full Text - Genes | Genomes | Genetics

... By combining publicly available data for yeast gene annotation (www. yeastgenome.org) and for ortholog prediction (www.orthomcl.org), we created a clustered map of the yeast genome based on gene conservation. After organizing the data so that yeast genes with similar patterns of gene conservation we ...
Integrons: natural tools for bacterial genome evolution
Integrons: natural tools for bacterial genome evolution

... self-transposition, but they are often found associated with transposons and/or conjugative plasmids that can serve as vehicles for the intra- and interspecies transmission of genetic material. The Tn21 and Tn7 transposon families provide examples of this [7,8]. As such, they have been found in a va ...
A novel mutation of the Keratin 12 gene responsible for a severe
A novel mutation of the Keratin 12 gene responsible for a severe

... studied. Unaffected family members and 100 normal controls were negative for this mutation. Conclusions: We have identified a novel mutation in the KRT12 gene that is associated with a symptomatic phenotype of Meesmann’s corneal dystrophy. This mutation results in a substitution of proline for argin ...
Mouse mutants and phenotypes - Case Transgenic And Targeting
Mouse mutants and phenotypes - Case Transgenic And Targeting

... other resources that report on mutant ES cells or mice for the gene of interest, with the number of, and links to, corresponding entries at the respective sites. If you are interested in IKMC products, follow the ‘Details’ link in the ‘IKMC Knockout Attempts’ column. This brings you to a page that l ...
l(1)sc
l(1)sc

... • bHLH transcription factors • Control neuroblast formation and cell fate in the lateral CNS ...
Analyzing stochastic transcription to elucidate the nucleoid`s
Analyzing stochastic transcription to elucidate the nucleoid`s

... intensities, or correlations, vary in function of the intergene distance along the megaplasmid pSymA when it is actively transcribed (data set A) and when only the stochastic transcription takes place (data set B). We calculated the Kendall tau coefficient for all pairs of genes in the replicon and ...
I = -[1/3*log 2 (1/3)+ 1/3*log 2 (1/3)+ 1/3*log 2 (1/3)] + 4.32 = 2.73
I = -[1/3*log 2 (1/3)+ 1/3*log 2 (1/3)+ 1/3*log 2 (1/3)] + 4.32 = 2.73

... • BLAT (2002) • Very fast searches (MySQL database) • Handle introns in RNA/DNA alignments • Data for more that 30 genomes (human, mouse, rat…) ...
Appendix: Fusion Gene Plasmid Construction
Appendix: Fusion Gene Plasmid Construction

... containing promoter sequence from -911 to + 3, in the pCAT(An) expression vector, has been previously described (3). This plasmid was digested with BamH I and Bgl II to remove the IGRP promoter sequence between -911 and -508. A fragment of the IGRP gene promoter from -1342 to -508 was isolated from ...
Chlorophyll
Chlorophyll

... However, the reaction of LOO radical with chlorophyllin was slow and the yield of one-electron oxidized species of chlorophyllin was also small. This indicates that inhibition of lipid peroxidation observed with chlorophyllin may involve other mechanisms. Introduction In recent years there has been ...
Chapter 12
Chapter 12

... • Cancer formation is a sequential process • A series of mutations causes progressive loss of cellular controls on growth and death • Cancer is a genetic disease – inherited mutations may predispose to cancer formation – acquired DNA damage leads to mutations in particular cells ...
Angelman Syndrome: Genotype, Phenotype and Differential
Angelman Syndrome: Genotype, Phenotype and Differential

... Vasomotor instability in RS Hypopigmentation in AS with deletion Tremor prominent in RS RS girls are anxious, not always happy Rett syndrome progressive with poorer ...
Evolution of cis-regulatory elements in duplicated genes of yeast
Evolution of cis-regulatory elements in duplicated genes of yeast

2 - GEP Community Server
2 - GEP Community Server

... 2. An initial report describing the annotation of one gene found in each student’s data set is required on Feb. 4. This is worth 10 points. 3. The complete annotation report is due on March 4. This is worth 28points. 4. The simulations report is due on March 25. This is worth 10 points. 5. The compl ...
Document
Document

...  encodes one protein (structural gene) or tRNA and rRNA Allele = concrete form of gene How many alleles can have gene? Locus (plural loci) = fixed position of gene on chromosome GENOTYPE - the genetic (allelic) constitution of organism with respect to trait Homozygous - two alleles of certain gene ...
Tumours-of-the
Tumours-of-the

... patterns possible. May produce bile if well differentiated. Spread to regional lymph nodes, lungs and less often elsewhere. Alpha-fetoprotein - raised plasma levels a useful but non-specific marker. Extremely poor prognosis. (Better in sub-type fibrolamellar carcinoma). ...
Genetic Mutations
Genetic Mutations

... Triple X syndrome is associated with an increased risk of learning disabilities and delayed development of speech and language skills. Delayed development of motor skills (such as sitting and walking), weak muscle tone (hypotonia), and behavioral and emotional difficulties are also possible, but the ...
Bottlenecks in molecular testing for rare genetic diseases
Bottlenecks in molecular testing for rare genetic diseases

... number of exons (beta thalassemia). Also, screening for SCA is very common, although mutations in SCA genes are uncommon. Apart from these handful of easy tests, for the majority of genetic disorders every patient has its own private mutation. As the average number of exons in the human genome is ap ...
8.2 Human Inheritance
8.2 Human Inheritance

... Mendelian Inheritance in Humans Mendelian inheritance refers to the inheritance of traits controlled by a single gene with two alleles, one of which may be dominant to the other. Not many human traits are controlled by a single gene with two alleles, but they are a good starting point for understand ...
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Oncogenomics



Oncogenomics is a relatively new sub-field of genomics that applies high throughput technologies to characterize genes associated with cancer. Oncogenomics is synonymous with ""cancer genomics"". Cancer is a genetic disease caused by accumulation of mutations to DNA leading to unrestrained cell proliferation and neoplasm formation. The goal of oncogenomics is to identify new oncogenes or tumor suppressor genes that may provide new insights into cancer diagnosis, predicting clinical outcome of cancers, and new targets for cancer therapies. The success of targeted cancer therapies such as Gleevec, Herceptin, and Avastin raised the hope for oncogenomics to elucidate new targets for cancer treatment.Besides understanding the underlying genetic mechanisms that initiates or drives cancer progression, one of the main goals of oncogenomics is to allow for the development of personalized cancer treatment. Cancer develops due to an accumulation of mutations in DNA. These mutations accumulate randomly, and thus, different DNA mutations and mutation combinations exist between different individuals with the same type of cancer. Thus, identifying and targeting specific mutations which have occurred in an individual patient may lead to increased efficacy of cancer therapy.The completion of the Human Genome Project has greatly facilitated the field of oncogenomics and has increased the abilities of researchers to find cancer causing genes. In addition, the sequencing technologies now available for sequence generation and data analysis have been applied to the study of oncogenomics. With the amount of research conducted on cancer genomes and the accumulation of databases documenting the mutational changes, it has been predicted that the most important cancer-causing mutations, rearrangements, and altered expression levels will be cataloged and well characterized within the next decade.Cancer research may look either on the genomic level at DNA mutations, the epigenetic level at methylation or histone modification changes, the transcription level at altered levels of gene expression, or the protein level at altered levels of protein abundance and function in cancer cells. Oncogenomics focuses on the genomic, epigenomic, and transcript level alterations in cancer.
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