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differential gene expression
differential gene expression

... 1. Eukaryotic cells have many more genes (23,700 in human cells) in their genomes than prokaryotic cells (average 3000). 2. Physically there are more obstacles as eukaryotic chromatin is wrapped around histone proteins. ...


... multiple times on the same chromosome. The number of tandem repeats differs from one individual to another, causing the length of the PCR product to differ. For example one chromosome could look like this, with three tandem repeat (see above), while a chromosome might have four, giving a larger PCR ...
Freshman Seminar
Freshman Seminar

... 5’ TAGCCA* 3’ 5’ TA* 3’ ...
mcb122 tutorial kit - Covenant University
mcb122 tutorial kit - Covenant University

... 10. Nucleic acid hybridization tests the ability of DNA from different sources to base pair with each other. The more similar the DNA sequence is, the greater the amount of pairing, or hybridization. The more hybridization that occurs, the greater the degree of relationship. This technique is used f ...
High Resolution Melt: species identification in theory and practice
High Resolution Melt: species identification in theory and practice

... describes well the theoretical expectations and the practical reality of High Resolution Melt (HRM) method, especially from the aspect of species identification in two-case-studies described here. HRM is a post PCR technique based on real-time detection of dissociation (melt) of dsDNA molecules by r ...
Introduction to Biotechnology
Introduction to Biotechnology

... Sodium dodecyl sulfate polyacrylamide gel electrophoresis, is a technique used in biochemistry, genetics and molecular biology to separate proteins according to their electrophoretic mobility ...
Document
Document

... • Two synthetic oligonucleotides complementary to the 3’ ends of the segment of interest are added in great excess to the denatured DNA, then the temperature is lowered • The genomic DNA remains denatured since the complementary strands are at too low a concentration to encounter each other during t ...
Prostate cancer stem cells Ongoing Projects 3
Prostate cancer stem cells Ongoing Projects 3

... sequences.
This
can
lead
to
genes
being
gained
or
lost
or
being
 under
 the
 control
 of
 the
 wrong
 elements.
 Increased
 expression
 of
 oncogenes
 or
 decreseed
 expression
 of
 tumour
 suppressor
 genes
can
lead
to
cancer.
 We
 use
 a
 method
 called
 FISH
 (fluorescent
 in
 situ
 hybridisa-on)
 ...
Analysis of 3 dimensional interactions in DNA and chromatin
Analysis of 3 dimensional interactions in DNA and chromatin

... Human genome is composed of approximately 22 000 protein coding genes. All the somatic cells in the human body contain exactly the same genes, so why do we have various different cell types and tissues? The answer lies on strictly regulated gene expression. During the differentiation some genes are ...
population_genetics_and_human_evolution_final2
population_genetics_and_human_evolution_final2

... At every genetic locus, the size of each Short Tandem Repeat (STR) is determined by use of a genetic analyzer, which separates the DNA that has been copied (by a technique of gel electrophoresis). The genetic analyzer also detects the fluorescent at every Short Tandem Repeat Profile Matching A calcu ...
Chapter 11e
Chapter 11e

Microbial diversity in different fields of conventional and biological
Microbial diversity in different fields of conventional and biological

... diversity of bacterial functional communities is greater in soils from organic farms, while species diversity is similar. The propagule numbers of Trichoderma has been shown to be higher in soils from conventional farms (Liu et al., 2007). Other investigations clearly indicate that the potential fun ...
Cladogram ppt Intro to cladograms
Cladogram ppt Intro to cladograms

... • These provide evidence that all ...
Recently genetic tests for DNA markers for marbling and tenderness
Recently genetic tests for DNA markers for marbling and tenderness

... All individuals receive one copy (allele) of each gene from their mother, and one from their father. The DNA sequence of a gene inherited from each parent may be identical in which case the individual is said to be homozygous for that gene, or the sequence of a gene inherited from each parent may v ...
MIDTAL MICROARRAYS FOR THE DETECTION OF HARMFUL ALGAE: A  COMMERCIAL REALITY AND μAQUA NOT FAR BEHIND FOR DIATOMS IN 
MIDTAL MICROARRAYS FOR THE DETECTION OF HARMFUL ALGAE: A  COMMERCIAL REALITY AND μAQUA NOT FAR BEHIND FOR DIATOMS IN 

... In  the  EU  FP7  project  MIDTAL  (microarrays  for  the  detection  of  toxic  algae),  we  targeted  rapid  species  identification  using  rRNA  genes  to  generate  “barcodes”  specific  for  probe  design  to  recognize  species  or  even  strains.  A  toxin‐based  microarray  includes  antibo ...
3/27
3/27

... • Robot moves pins with DNA to slides • Robot “prints” DNA onto slide – DNA sticks to slide by hydrostatic interactions ...
CS 6293 Advanced Topics: Translational Bioinformatics
CS 6293 Advanced Topics: Translational Bioinformatics

... • The first metagenomic studies conducted using highthroughput sequencing used massively parallel. • Three other technologies commonly applied to environmental sampling are the Ion Torrent Personal Genome Machine, the Illumina Genome Analyzer II and the Applied Biosystems solid system. • These techn ...
A simple and improved PCR-based technique for white
A simple and improved PCR-based technique for white

... cross-species application of similar zinc-finger based techniques (Morin et al. 2005; Shaw et al. 2003; Wilson and White 1998). Although previous studies have provided more complicated protocols to distinguish sexes of whitetailed deer tissue samples, this technique provides several advantages for r ...
Ch. 19 The Organization and Control of Eukaryotic Genomes
Ch. 19 The Organization and Control of Eukaryotic Genomes

... There are several presence/absence polymorphisms that are diagnostic for different human populations Can be used to infer time and order of sequence duplication events ...
DNA PROFILING
DNA PROFILING

... enzymes, which cut the DNA at a specific base sequence ...
medical genetics what is medical genetics?
medical genetics what is medical genetics?

... 2. Deletion/ insertion : a loss / gain of DNA sequence that range from single Bp to large part of chromosome. If no. of Bp affected is no multiple of 3 ------ Frame shift mutation i.e. it can alter all the downstream codons. 3. Duplication / Deletion of whole gene : may result in more than 2 copies ...
Cloning and functional analysis of
Cloning and functional analysis of

... dissolved with the TE buffer. The digested pOJ446 and the partially digested chromosomal DNA were ligated using a DNA ligation kit ver. 2 (Takara Bio Inc.) at 4°C overnight. After ethanol precipitation, the ligated DNA was dissolved with the TE buffer. The resulting ligation mixture was packaged in ...
Lecture 5
Lecture 5

...  When there is enough methyl groups attached, it turns the gene off and makes it difficult to transcribe  Some (but not all) methylations are reversible  Abnormal methylation can lead to problems - Ex: FMR1 – hypermethylation leads to Fragile X syndrome; which is the leading Mendelian (single gen ...
Dairy Jepoardy 3
Dairy Jepoardy 3

... Term that describes a gene or DNA fragment known to be linked to a gene of interest. ...
F - cell
F - cell

... Ammonium (NH4+) is used as the sole N source by most microorganisms. Ammonium could be produced from N2 by nitrogen fixation, or from reduction of nitrate and nitrite. ...
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