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The Florida State University College of Arts and Sciences
The Florida State University College of Arts and Sciences

... paramutation, where paramutation is the trans interaction of two alleles that results in alteration of the expression level of one allele in a meiotically heritable manner (Chandler 2010). The epigenetic transcriptional silencing of BTG occurs independently of paramutation and is therefore dependent ...
Whole-genome expression analysis of snf swi mutants of
Whole-genome expression analysis of snf swi mutants of

... Therefore, several fundamental issues remain unresolved concerning Snf兾Swi function. The introduction of methods to measure the mRNA levels for every S. cerevisiae gene (27) has provided the tools to answer some of these questions. We have used whole-genome DNA microarrays to identify the entire set ...
CHARACTERIZATION OF MOCR, A GNTR TRANSCRIPTIONAL
CHARACTERIZATION OF MOCR, A GNTR TRANSCRIPTIONAL

... the most agriculturally significant microbial species due to its ability to form nodules on the soybean from which it differentiates into nitrogen-fixing bacteriods (22). In fact, the relationship between B. japonicum and its host, Glycine max, is one of the most thoroughly investigated microbial sy ...
PCB5065 Exam 2 - UF Plant Pathology
PCB5065 Exam 2 - UF Plant Pathology

... chromosomes with respect to their centromeres and with respect to each other? Draw map. There is one unusual tetrad. What happened to the thi gene? Since there are no NPDs, almost all PDs, the genes are tightly linked (3 pts). 1/2 of 8 TTs =4/817 = 0.5 cM distance (6 pts). Since second division patt ...
Andrew Farmer NCGR Paul Scott Iowa State Bill
Andrew Farmer NCGR Paul Scott Iowa State Bill

... Knox 1 ELK Pyruvate dehydrogenase Transketolase Tubby ...
Chromosome mapping of the sweet potato little leaf
Chromosome mapping of the sweet potato little leaf

The insect cytochrome oxidase I gene: evolutionary
The insect cytochrome oxidase I gene: evolutionary

Nitrogen Fixation In Methanogens: The Archaeal
Nitrogen Fixation In Methanogens: The Archaeal

... operator has not yet been identified, but one may speculate that it has dimeric nature and that each of two identical subunits binds to one half of the inverted repeat on the same face of the helix, as in the paradigm of bacterial repression. The evidence provided by the methanogen nif system, that ...
Glucocorticoid-remediable aldosteronism
Glucocorticoid-remediable aldosteronism

... in GRA, they have been found in rodents to have only weak mineralocorticoid activity [8]. However, it is possible that these hybrid compounds possesssignificant mineralocorticoid activity in humans. The molecular basis of GRA was discovered by applying a candidategene approachin a pedigree where aff ...
1 Gene trees and species trees The lines of organismal descent that
1 Gene trees and species trees The lines of organismal descent that

... Everything I have described so far applies equally to asexual and sexual population. In both cases each nucleotide position has an underlying tree involving coalescence as one looks backwards through time (and lineage sorting as one looks forward). The fundamental difference between an asexual and a ...
The Detection of Carbapenemases in Carbapenem
The Detection of Carbapenemases in Carbapenem

... Multidrug-resistant Gram-negative (MDRGN) bacteria are increasing in prevalence worldwide and are associated with an increase in morbidity and mortality. The most prevalent resistance mechanisms are carbapenemases. The different carbapenemases have different epidemiology and therapeutic options. The ...
snpGalaxyEx.new
snpGalaxyEx.new

... Selecting known coding SNPs predicted to be damaging, then finding their genes and associated pathways. a. Import a public library file containing pre-computed results from running PolyPhen-2 on the dbSNP database. b. Join our input file with the PolyPhen-2 results row-by-row, based on interval over ...
3_platform
3_platform

... 768 clones have been fully sequenced: • 192 genes, 2 systems, 2 separate isolates each • Sequencing done to at least 1 in 10,000 accuracy ...
Mendelian Genetics
Mendelian Genetics

... Mendel’s work, plant and animal breeders based their work on the theory of “Blending”. ...
PDF file
PDF file

... map, which then needs further work to convert it into a possible phenotype. Finally, the possible phenotype can only become a real phenotype when all relevant kinetic and regulatory properties are taken into account, together with information about how all the components are organized into a three-d ...
Mutations in Escherichiu coZi that Mutations Distant
Mutations in Escherichiu coZi that Mutations Distant

... replicated to such plates. This surprising result suggests that the mutations in strains ~ ~ 2 and 3 6 ~ ~ 2 are 4 2extremely closely linked to ilv, the locus in which valine-resistance lies. However, when some of the transductants were streaked on indole+g-methyltryptophan plates with either glycer ...
Fighting the good cause: meaning, purpose
Fighting the good cause: meaning, purpose

... An  LTR  retrotransposon  can  serve  as  a  paradigm.  In  its  guise  as  double-­‐‑stranded   genomic  DNA,  the  retrotransposon  is  transcribed  by  host-­‐‑encoded  RNA  polymerase   from  an  antisense-­‐‑strand  of  DNA  into  a  sense-­‐‑strand  of  RNA.  The  resulting  RNA  can   have  t ...
Occurrence of phosphate acquisition genes in Prochlorococcus cells
Occurrence of phosphate acquisition genes in Prochlorococcus cells

... Recently, it was shown that the distribution of P acquisition genes among Prochlorococcus strains was not consistent with their 16S rRNA phylogeny. Instead, the distribution of these nutrient uptake genes suggested that Prochlorococcus cells from P-limited regions contained more P acquisition gene c ...
here - Genomes Unzipped
here - Genomes Unzipped

A program for annotating and predicting the effects of single
A program for annotating and predicting the effects of single

... genome sequences. Once a genome is sequenced, the SnpEff program can be used to annotate and classify genetic polymorphisms based on their effects on annotated genes, such as synonymous or non-synonymous SNPs, start codon gains or losses, stop codon gains or losses; or based on their genomic locatio ...
Mycobacterium kyorinense sp. nov., a novel, slow
Mycobacterium kyorinense sp. nov., a novel, slow

... INTRODUCTION The advent of new molecular techniques has evoked great interest in the identification and classification of nontuberculous mycobacteria that cause infectious diseases in mammals. Currently, there are more than 100 species of nontuberculous mycobacteria, of which approximately 60 are co ...
Poster - University of British Columbia
Poster - University of British Columbia

... 800 mcg BID by inhalation. After two rounds of linear amplification of the extracted RNA, the gene expression profiles were analyzed using the Affymetrix U133A microarray chip. Results: Using Principal Component Analysis, the effect of active smoking was found to be stronger than the effect of budes ...
The Birth- and- Death Evolution of Multigene Families Revisited
The Birth- and- Death Evolution of Multigene Families Revisited

... fragmented. This is a very important problem since repetitive DNA regions are usually the worst assembled and, therefore, often incompletely represented in a genome annotation; this limitation is more critical for tandemly distributed repetitive regions than for those showing a more dispersed distri ...
F 1
F 1

... VIII, the clotting factor, is carried on the X chromosome. The affected males inherited their single X chromosome from their mothers—if the mutated form of the gene was present, they would develop the disease. Daughters would inherit a normal X chromosome as well and would not express the recessive ...
Free Full Text ( Final Version , 339kb )
Free Full Text ( Final Version , 339kb )

... thesaurus we derived from LocusLink2, one of the more comprehensive genetic databases. Although this has several restrictions, we assume that the symbols in the thesaurus are referring (among others), to genes. Disambiguation algorithms need data to be trained and tested for accuracy. The manual com ...
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Pathogenomics

Pathogen infections are among the leading causes of infirmity and mortality among humans and other animals in the world. Until recently, it has been difficult to compile information to understand the generation of pathogen virulence factors as well as pathogen behaviour in a host environment. The study of Pathogenomics attempts to utilize genomic and metagenomics data gathered from high through-put technologies (e.g. sequencing or DNA microarrays), to understand microbe diversity and interaction as well as host-microbe interactions involved in disease states. The bulk of pathogenomics research concerns itself with pathogens that affect human health; however, studies also exist for plant and animal infecting microbes.
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