Full Text - Archives of Pediatric Infectious Diseases
... which stands for New Delhi metallo-beta-lactamase-1. NDM-1 producing bacteria are resistant to nearly all antibiotics, including carbapenem antibiotics which are also known as antibiotics of the last resort. Because, NDM-1 gene makes the bacterium produce an enzyme which neutralizes the activity of ...
... which stands for New Delhi metallo-beta-lactamase-1. NDM-1 producing bacteria are resistant to nearly all antibiotics, including carbapenem antibiotics which are also known as antibiotics of the last resort. Because, NDM-1 gene makes the bacterium produce an enzyme which neutralizes the activity of ...
Discovery of Cyclotide-Like Protein Sequences in Graminaceous
... a range of plants with the aim of discovering and identifying new peptides belonging to the cyclotide family. To date, cyclotides have been identified in every Violaceae plant screened as well as in a few Rubiaceae species. The Rubiaceae and Violaceae are not closely related phylogenetically, with t ...
... a range of plants with the aim of discovering and identifying new peptides belonging to the cyclotide family. To date, cyclotides have been identified in every Violaceae plant screened as well as in a few Rubiaceae species. The Rubiaceae and Violaceae are not closely related phylogenetically, with t ...
Caspary T, Anderson KV. Dev Dyn. 2006 Sep;235(9):2412-23. Uncovering the uncharacterized and unexpected: unbiased phenotype-driven screens in the mouse. (Review)
... other elements of the genome. As a bonus, the sequence of the non-coding portions of the genome has greatly aided in positional cloning efforts because that sequence increases the number of DNA polymorphisms available that can be used for genetic mapping. Now, armed with the complete genome sequence ...
... other elements of the genome. As a bonus, the sequence of the non-coding portions of the genome has greatly aided in positional cloning efforts because that sequence increases the number of DNA polymorphisms available that can be used for genetic mapping. Now, armed with the complete genome sequence ...
Analysis of Biological Networks: Genetic Interaction Networks
... Figure 4: Source: [4]. Connections between gene functions based on synthetic genetic interaction. Colored cells in this matrix represent pairs of GO attributes that are associated with genetic interactions more than would be expected by chance (p < 0.05). 2. Two GO annotations A and B are considere ...
... Figure 4: Source: [4]. Connections between gene functions based on synthetic genetic interaction. Colored cells in this matrix represent pairs of GO attributes that are associated with genetic interactions more than would be expected by chance (p < 0.05). 2. Two GO annotations A and B are considere ...
bb2013_03 - Territory Stories
... condition in breeders, and reduced branding rates. The Dunnicliffs and Armstrongs at Beetaloo had noticed that the traditional set stocking regime was impacting on their land condition and animal performance. Previous experience in both temperate and tropical environments convinced them that a rotat ...
... condition in breeders, and reduced branding rates. The Dunnicliffs and Armstrongs at Beetaloo had noticed that the traditional set stocking regime was impacting on their land condition and animal performance. Previous experience in both temperate and tropical environments convinced them that a rotat ...
Document
... Visualization Using IGV The Integrative Genomics Viewer (IGV) is a tool that supports the visualization of mapped reads to a reference genome, among other functionalities. We will use it to observe where hits were called for the de-novo alignment (Run 1A) for the two samples (control and experimenta ...
... Visualization Using IGV The Integrative Genomics Viewer (IGV) is a tool that supports the visualization of mapped reads to a reference genome, among other functionalities. We will use it to observe where hits were called for the de-novo alignment (Run 1A) for the two samples (control and experimenta ...
Virulence gene regulation in Salmonella enterica
... gastroenteritis is much higher (2). Salmonella infection follows ingestion of contaminated food, water or beverages and requires survival in the stomach and colonization of the small intestine. At this stage, the bacteria are seen to start multiplying and adhering to the intestinal mucosa. In the mo ...
... gastroenteritis is much higher (2). Salmonella infection follows ingestion of contaminated food, water or beverages and requires survival in the stomach and colonization of the small intestine. At this stage, the bacteria are seen to start multiplying and adhering to the intestinal mucosa. In the mo ...
Gentile, Margaret: Computational Methods for the Design of PCR Primers for the Amplification of functional Markers from Environmental Samples
... and highly conserved amino acid sequences. This is an improvement over other mentioned primer design algorithms that preformed global alignments and then looked for conserved regions. The program then allows for sequences to be weighted for importance in the design. Using a position specific scoring ...
... and highly conserved amino acid sequences. This is an improvement over other mentioned primer design algorithms that preformed global alignments and then looked for conserved regions. The program then allows for sequences to be weighted for importance in the design. Using a position specific scoring ...
Wide-spread polyploidizations during plant evolution Dicot
... Figure 2. Cart oon showing t he rearrangem ent s ind icat ed b y lowercase let t ers in Figure 1. Monocolored chromosomes belong to the WGD Ancestor. Chromosomes in gray boxes are extant L. kluyveri chromosomes. Events encircled by a color correspond to events on branches of the same color in Figure ...
... Figure 2. Cart oon showing t he rearrangem ent s ind icat ed b y lowercase let t ers in Figure 1. Monocolored chromosomes belong to the WGD Ancestor. Chromosomes in gray boxes are extant L. kluyveri chromosomes. Events encircled by a color correspond to events on branches of the same color in Figure ...
Genome Mapping in the Horse
... denaturated and then hybridised to let the probe anneal to the complementary sequence. Unbound probe is then washed off to allow the visualisation of the specific hybridisation signal using appropriate detection methods. The probes used can vary considerably in size, and range from a few bases to se ...
... denaturated and then hybridised to let the probe anneal to the complementary sequence. Unbound probe is then washed off to allow the visualisation of the specific hybridisation signal using appropriate detection methods. The probes used can vary considerably in size, and range from a few bases to se ...
Determining the cause of patchwork HBA1 and HBA2 genes
... the latter interestingly being a characteristic of the wildtype HBA2 IVSII sequence. The nucleotide at IVSII,55, however, remained wildtype HBA1. We therefore conclude that we have identified a variant allele of HBA1 in the heterozygous state in patient AP, whereby a short stretch of IVSII has been ...
... the latter interestingly being a characteristic of the wildtype HBA2 IVSII sequence. The nucleotide at IVSII,55, however, remained wildtype HBA1. We therefore conclude that we have identified a variant allele of HBA1 in the heterozygous state in patient AP, whereby a short stretch of IVSII has been ...
Depth-stratified functional and taxonomic niche
... through mortality, horizontal gene transfer, and metabolic reprogramming by viral-encoded auxiliary metabolic genes (AMGs). However, our knowledge of viral roles in the oceans is primarily limited to surface waters. Here we assess the depth distribution of protein clusters (PCs) in the first largesc ...
... through mortality, horizontal gene transfer, and metabolic reprogramming by viral-encoded auxiliary metabolic genes (AMGs). However, our knowledge of viral roles in the oceans is primarily limited to surface waters. Here we assess the depth distribution of protein clusters (PCs) in the first largesc ...
Mammals Differences between the Chicken and Antagonist in the
... The human IL-1 family contains 11 genes encoded at three separate loci. Nine, including IL-1R antagonist (IL-1RN), are present at a single locus on chromosome 2, whereas IL-18 and IL-33 lie on chromosomes 11 and 9, respectively. There are currently only two known orthologs in the chicken, IL-1b and ...
... The human IL-1 family contains 11 genes encoded at three separate loci. Nine, including IL-1R antagonist (IL-1RN), are present at a single locus on chromosome 2, whereas IL-18 and IL-33 lie on chromosomes 11 and 9, respectively. There are currently only two known orthologs in the chicken, IL-1b and ...
use of genomic tools to discover the cause of
... Three sire families were identified as segregating for this trait. Genome wide linkage analysis using 104 microsatellite DNA markers was used to map the gene to ECA14 (LOD > 11.0). Four genes, namely SPARC, SLC36A1, SLC36A2 and SLC36A3, were selected from the region implicated by linkage and their e ...
... Three sire families were identified as segregating for this trait. Genome wide linkage analysis using 104 microsatellite DNA markers was used to map the gene to ECA14 (LOD > 11.0). Four genes, namely SPARC, SLC36A1, SLC36A2 and SLC36A3, were selected from the region implicated by linkage and their e ...
Life: The Science of Biology, 8e
... genes for unusual metabolic functions such as breaking down hydrocarbons. Fertility factors (F factors) have genes needed for conjugation; F factor can be transferred during conjugation. ...
... genes for unusual metabolic functions such as breaking down hydrocarbons. Fertility factors (F factors) have genes needed for conjugation; F factor can be transferred during conjugation. ...
Learning objectives for Sequence Analysis 1
... 19. DNA and protein sequences of different organisms are often related. Genes with similar function are conserved across widely divergent species. 20. Through simultaneous alignment of the sequences of these genes, sequence patterns that have been subject to conservation and alteration may be analyz ...
... 19. DNA and protein sequences of different organisms are often related. Genes with similar function are conserved across widely divergent species. 20. Through simultaneous alignment of the sequences of these genes, sequence patterns that have been subject to conservation and alteration may be analyz ...
Supplement Figures
... X-axis is the relative location, Y-axis the relative strength and the color is the % of genes having a bottleneck matching the parameters. A all E. coli genes longer than 100 (well above region size and still maintain 90% of the E. coli genes) codons were plotted. B only the highest expressed genes ...
... X-axis is the relative location, Y-axis the relative strength and the color is the % of genes having a bottleneck matching the parameters. A all E. coli genes longer than 100 (well above region size and still maintain 90% of the E. coli genes) codons were plotted. B only the highest expressed genes ...
100 Antibiotic.p65
... Many known antibiotics affect processes within human and animal cells and so are normally too toxic for use as medicines. However, some may have to be used, with great care, in special cases where other less aggressive treatments are not available. Even penicillin and its derivatives must be used wi ...
... Many known antibiotics affect processes within human and animal cells and so are normally too toxic for use as medicines. However, some may have to be used, with great care, in special cases where other less aggressive treatments are not available. Even penicillin and its derivatives must be used wi ...
Microarray Data Analysis
... expression data. While softwares to analyze the data are freely available from academic institutions; open source softwares are not. In the present project, I have developed a Microarray Data Analysis (MDA) application to analyze raw gene expression data, which provides a basic framework for develop ...
... expression data. While softwares to analyze the data are freely available from academic institutions; open source softwares are not. In the present project, I have developed a Microarray Data Analysis (MDA) application to analyze raw gene expression data, which provides a basic framework for develop ...
Research Note Identification of a co
... Leaf rust, caused by Puccinia triticina (Pt), is an important disease of wheat worldwide. New leaf rust resistance loci from diverse germplasm including wild relatives of wheat are continuously being identified. Many leaf rust resistance genes produce similar infection types and therefore are diffic ...
... Leaf rust, caused by Puccinia triticina (Pt), is an important disease of wheat worldwide. New leaf rust resistance loci from diverse germplasm including wild relatives of wheat are continuously being identified. Many leaf rust resistance genes produce similar infection types and therefore are diffic ...
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... statistic of an SNP combination is defined by the number of times it is selected from all the training sets. The higher the CVC, the more robust the SNP combination as a predictive interaction model. By default, in this step, only those SNP combinations with CVCs.(K/2)/K are outputted as possible G6 ...
... statistic of an SNP combination is defined by the number of times it is selected from all the training sets. The higher the CVC, the more robust the SNP combination as a predictive interaction model. By default, in this step, only those SNP combinations with CVCs.(K/2)/K are outputted as possible G6 ...
Leptosiphon - Florida Museum of Natural History
... allow for better mapping of floral characteristics. To refine phylogenetic relationships, plant material was obtained from field, herbaria, and greenhouse collections for 197 accessions, representing all 38 species, plus Phlox as an outgroup. We selected 96 samples, including all species and each co ...
... allow for better mapping of floral characteristics. To refine phylogenetic relationships, plant material was obtained from field, herbaria, and greenhouse collections for 197 accessions, representing all 38 species, plus Phlox as an outgroup. We selected 96 samples, including all species and each co ...