Functional genomics and drug discovery: use of alternative model
... resulted in the generation of enormous sequence database comprising of the genome sequences of the various model organisms such as E coli, yeast, C. elegans, Drosophila, Arabidopsis, mouse, etc. One of the most exciting milestone in this sequencing effort has been the complete sequencing of human ge ...
... resulted in the generation of enormous sequence database comprising of the genome sequences of the various model organisms such as E coli, yeast, C. elegans, Drosophila, Arabidopsis, mouse, etc. One of the most exciting milestone in this sequencing effort has been the complete sequencing of human ge ...
Molecular identification of the bacterial microbiome resident in the hindgut... North American Beaver (Castor canadensis)
... method. DNA was PCR amplified from each animal using the primer set 27F and 519R to amplify only the bacterial V1-V3 region of the 16S rRNA gene. Samples were then sent to Molecular Research DNA (Stilwater, TX) for sequencing. A total of 61,614 sequences were obtained and ranged from 3,762 to 33,114 ...
... method. DNA was PCR amplified from each animal using the primer set 27F and 519R to amplify only the bacterial V1-V3 region of the 16S rRNA gene. Samples were then sent to Molecular Research DNA (Stilwater, TX) for sequencing. A total of 61,614 sequences were obtained and ranged from 3,762 to 33,114 ...
Statistical Applications in Biology and Genetics
... n experiments (patients, types of cell lines, types of cancer tissues, etc) p genes on one array Subtracted and normalized gene expression ...
... n experiments (patients, types of cell lines, types of cancer tissues, etc) p genes on one array Subtracted and normalized gene expression ...
Aalborg Universitet Using metagenomics and metatranscriptomics to study specific bacterial species
... anaerobic feast and aerobic famine conditions of the EBPR process. ...
... anaerobic feast and aerobic famine conditions of the EBPR process. ...
Certificate of Analysis MicroSeq(R) 500 16S rDNA
... The combined forward and reverse sequencing accuracy is at least 99.5 % for the amplified product from E. coli genomic DNA. The combined forward and reverse sequencing clear read is at least 476 base pairs for the fragment sequenced using the amplified PCR product from E. coli genomic DNA ...
... The combined forward and reverse sequencing accuracy is at least 99.5 % for the amplified product from E. coli genomic DNA. The combined forward and reverse sequencing clear read is at least 476 base pairs for the fragment sequenced using the amplified PCR product from E. coli genomic DNA ...
ISVEE/181 Molecular characterization of indigenous peste des petits
... goats, endemic in India. The study was undertaken to characterize the local PPRV by the detection of antigen by IcELISA and sequencing of fusion (F) protein and nucleoprotein (N) gene segments and phylogenetic analysis, so as to focus on genetic variation in the field viruses. A total of 64 clinical ...
... goats, endemic in India. The study was undertaken to characterize the local PPRV by the detection of antigen by IcELISA and sequencing of fusion (F) protein and nucleoprotein (N) gene segments and phylogenetic analysis, so as to focus on genetic variation in the field viruses. A total of 64 clinical ...
Scientific researcher for the project `Metagenetic upgrading of
... Project: Mangroves are located at the boundary between marine and terrestrial environments and provide shelter for important fish species. Unfortunately mangroves are also strongly impacted by coastal development, altering biodiversity and ecosystem functioning. Nematodes are often used as bioindica ...
... Project: Mangroves are located at the boundary between marine and terrestrial environments and provide shelter for important fish species. Unfortunately mangroves are also strongly impacted by coastal development, altering biodiversity and ecosystem functioning. Nematodes are often used as bioindica ...
Human genomics
... • Bioinformatics is the use of computer technology to identify DNA sequences. • Systematics compares human genome sequence data and genomes of other species to provide information on evolutionary relationships and origins. • Personalised medicine is based on an individual’s genome. Analysis of an in ...
... • Bioinformatics is the use of computer technology to identify DNA sequences. • Systematics compares human genome sequence data and genomes of other species to provide information on evolutionary relationships and origins. • Personalised medicine is based on an individual’s genome. Analysis of an in ...
Lecture
... Fosmid/Cosmid----Artificially constructed cloning vector containing the cos gene of phage lambda. Cosmids can be packaged in lambda phage particles for infection into E. coli; this permits cloning of larger DNA fragments (up to 45kb) than can be introduced into bacterial hosts in plasmid vectors. ...
... Fosmid/Cosmid----Artificially constructed cloning vector containing the cos gene of phage lambda. Cosmids can be packaged in lambda phage particles for infection into E. coli; this permits cloning of larger DNA fragments (up to 45kb) than can be introduced into bacterial hosts in plasmid vectors. ...
to - Stud Game Breeders
... Nguni genome variation • To provide the first resources to facilitate the understanding of the genetic value of Nguni cattle • Target: 10 genomes at 10x coverage • Progress: 9 genomes at 10-12x coverage ...
... Nguni genome variation • To provide the first resources to facilitate the understanding of the genetic value of Nguni cattle • Target: 10 genomes at 10x coverage • Progress: 9 genomes at 10-12x coverage ...
Faber: Sequence resources
... Contain STSs, many corresponding to genes or ESTs One clone per MB on every chromosome, excellent coverage Reproducibly prepared subsets of the genome from several individuals, each containing a manageable number of loci ...
... Contain STSs, many corresponding to genes or ESTs One clone per MB on every chromosome, excellent coverage Reproducibly prepared subsets of the genome from several individuals, each containing a manageable number of loci ...
Title: GeneWiz browser: An Interactive Tool for Visualizing
... Binnewies, Craig J. Benham, and David W. Ussery Published on Standards in Genomic Sciences (2009) 1: 204-215 Citation count: 35 ...
... Binnewies, Craig J. Benham, and David W. Ussery Published on Standards in Genomic Sciences (2009) 1: 204-215 Citation count: 35 ...
Slide 1
... Archibald Garrod, observes that the disease alkaptonuria has a genetic cause and is inherited as a recessive condition. ...
... Archibald Garrod, observes that the disease alkaptonuria has a genetic cause and is inherited as a recessive condition. ...
here
... Microbial diversity at different stages of wine making has been studied for many years in the quest to understand the wine ecology and the role of different microorganisms in grape must fermentation. However, none of the methods used provide comprehensive genetic information to allow for detailed an ...
... Microbial diversity at different stages of wine making has been studied for many years in the quest to understand the wine ecology and the role of different microorganisms in grape must fermentation. However, none of the methods used provide comprehensive genetic information to allow for detailed an ...
Diapositive 1 - Master 1 Biologie Santé
... organism • Comprehensive analysis of mutations present in cancer clones. ...
... organism • Comprehensive analysis of mutations present in cancer clones. ...
PowerPoint Presentation - The GS FLX Sequencer. What is it and
... • Achieve longer reads, averaging 200 - 300 bases. • Attain higher throughput with over 400,000 reads per run. • Generate single-read accuracy that is greater than 99.5% over 200+ base pair reads. • Benefit from consensus accuracy that is greater than 99.99%. *from Roche Genome Sequencer FLX System ...
... • Achieve longer reads, averaging 200 - 300 bases. • Attain higher throughput with over 400,000 reads per run. • Generate single-read accuracy that is greater than 99.5% over 200+ base pair reads. • Benefit from consensus accuracy that is greater than 99.99%. *from Roche Genome Sequencer FLX System ...
IntroBio520 - Nematode bioinformatics. Analysis tools and data
... science (derived from applied math, computer science, and statistics) to make the vast, diverse, and complex life sciences data more understandable and useful. It automates simple but repetitive types of analysis. ...
... science (derived from applied math, computer science, and statistics) to make the vast, diverse, and complex life sciences data more understandable and useful. It automates simple but repetitive types of analysis. ...
article here - Virus-X – A Horizon2020 project
... to look into the specific problems of this kind and possible solutions." To reach its goals, Virus-X will call on the expertise of investigators from Icelandic biotech firm Matis; Saromics Biostructures and Lund University in Sweden; the University of Bergen in Norway; the University of Durham in th ...
... to look into the specific problems of this kind and possible solutions." To reach its goals, Virus-X will call on the expertise of investigators from Icelandic biotech firm Matis; Saromics Biostructures and Lund University in Sweden; the University of Bergen in Norway; the University of Durham in th ...
Chapter 10: Microbial Systematics and the Domains Bacteria and
... Humans catalog these organisms using sets of characteristics based on similarities and differences Systematics has two major goals • Taxonomy • Phylogeny Microbial evolution is very difficult to understand without an ability to interpret phylogenetic trees. Many systematic studies rely on th ...
... Humans catalog these organisms using sets of characteristics based on similarities and differences Systematics has two major goals • Taxonomy • Phylogeny Microbial evolution is very difficult to understand without an ability to interpret phylogenetic trees. Many systematic studies rely on th ...
TruSight One Sequencing Panel Workflow
... panel—covering 12 Mb of genomic content, including 4,813 genes associated with known clinical phenotypes. ...
... panel—covering 12 Mb of genomic content, including 4,813 genes associated with known clinical phenotypes. ...
Metagenomics
Metagenomics is the study of genetic material recovered directly from environmental samples. The broad field may also be referred to as environmental genomics, ecogenomics or community genomics. While traditional microbiology and microbial genome sequencing and genomics rely upon cultivated clonal cultures, early environmental gene sequencing cloned specific genes (often the 16S rRNA gene) to produce a profile of diversity in a natural sample. Such work revealed that the vast majority of microbial biodiversity had been missed by cultivation-based methods. Recent studies use either ""shotgun"" or PCR directed sequencing to get largely unbiased samples of all genes from all the members of the sampled communities. Because of its ability to reveal the previously hidden diversity of microscopic life, metagenomics offers a powerful lens for viewing the microbial world that has the potential to revolutionize understanding of the entire living world. As the price of DNA sequencing continues to fall, metagenomics now allows microbial ecology to be investigated at a much greater scale and detail than before.