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Nitrogen Metabolism Overview
Nitrogen Metabolism Overview

... the same as the first step of fatty acid  oxidation. The fourth step involves an ATP‐ dependent carboxylation, the fifth step is a  hydration, and the last step is a cleavage  reaction to give products. Draw the  intermediates of leucine degradation. ...
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... bifunctional S-adenosylmethionine decar boxy lase / Orni thine decar boxy lase (AdoMetD C/ O D C) enzyme, represents one such target. Within this enzyme reside the two main regulatory activities for the biosyn­ thesis of polyamines. Furthermore, the bifunctional arrangement does not occur in the hum ...
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View Full PDF

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Catalytic triad



A catalytic triad refers to the three amino acid residues that function together at the centre of the active site of some hydrolase and transferase enzymes (e.g. proteases, amidases, esterases, acylases, lipases and β-lactamases). An Acid-Base-Nucleophile triad is a common motif for generating a nucleophilic residue for covalent catalysis. The residues form a charge-relay network to polarise and activate the nucleophile, which attacks the substrate, forming a covalent intermediate which is then hydrolysed to regenerate free enzyme. The nucleophile is most commonly a serine or cysteine amino acid, but occasionally threonine. Because enzymes fold into complex three-dimensional structures, the residues of a catalytic triad can be far from each other along the amino-acid sequence (primary structure), however, they are brought close together in the final fold.As well as divergent evolution of function (and even the triad's nucleophile), catalytic triads show some of the best examples of convergent evolution. Chemical constraints on catalysis have led to the same catalytic solution independently evolving in at least 23 separate superfamilies. Their mechanism of action is consequently one of the best studied in biochemistry.
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