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Viruses (Ch. 18) Scene from the 1918 influenza pandemic. Scene from the 2003 SARS Scare Comparing the size of a virus, a bacterium, and an animal cell Virus Bacterium Animal cell Animal cell nucleus 0.25 m T4 bacteriophage infecting an E. coli cell 0.5 m Infection by tobacco mosaic virus (TMV) Viral infection of plants Viral structure Capsomere of capsid RNA Capsomere Membranous envelope DNA Head Capsid Tail sheath RNA DNA Tail fiber Glycoprotein 18 250 mm 20 nm (a) Tobacco mosaic virus Glycoprotein 70–90 nm (diameter) 80–200 nm (diameter) 50 nm 50 nm (b) Adenoviruses (c) Influenza viruses 80 225 nm 50 nm (d) Bacteriophage T4 Classes of Animal Viruses A simplified viral reproductive cycle Entry into cell and uncoating of DNA DNA VIRUS Capsid Transcription Replication HOST CELL Viral DNA mRNA Viral DNA Capsid proteins Self-assembly of new virus particles and their exit from cell The lytic cycle of phage T4, a virulent phage 1 Attachment. The T4 phage uses 2 its tail fibers to bind to specific receptor sites on the outer surface of an E. coli cell. 5 Release. The phage directs production of an enzyme that damages the bacterial cell wall, allowing fluid to enter. The cell swells and finally bursts, releasing 100 to 200 phage particles. Entry of phage DNA and degradation of host DNA. The sheath of the tail contracts, injecting the phage DNA into the cell and leaving an empty capsid outside. The cell’s DNA is hydrolyzed. Phage assembly 4 Head Tails Tail fibers Assembly. Three separate sets of proteins self-assemble to form phage heads, tails, and tail fibers. The phage genome is packaged inside the capsid as the head forms. 3 Synthesis of viral genomes and proteins. The phage DNA directs production of phage proteins and copies of the phage genome by host enzymes, using components within the cell. The lytic and lysogenic cycles of phage , a temperate phage Phage DNA The phage attaches to a host cell and injects its DNA. Many cell divisions produce a large population of bacteria infected with the prophage. Phage DNA circularizes Phage Occasionally, a prophage exits the bacterial chromosome, initiating a lytic cycle. Bacterial chromosome Lytic cycle Lysogenic cycle Certain factors determine whether The cell lyses, releasing phages. Lytic cycle is induced New phage DNA and proteins are synthesized and assembled into phages. or Lysogenic cycle is entered Prophage The bacterium reproduces normally, copying the prophage and transmitting it to daughter cells. Phage DNA integrates into the bacterial chromosome, becoming a prophage. SARS (severe acute respiratory syndrome), a recently emerging viral disease (a) Young ballet students in Hong Kong wear face masks to protect themselves from the virus causing SARS. (b) The SARS-causing agent is a coronavirus like this one (colorized TEM), so named for the “corona” of glycoprotein spikes protruding from the envelope. The reproductive cycle of an enveloped RNA virus 1 Glycoproteins on the viral envelope Capsid bind to specific receptor molecules (not shown) on the host cell, promoting viral entry into the cell. RNA Envelope (with glycoproteins) 2 Capsid and viral genome enter cell HOST CELL The viral genome (red) functions as a template for synthesis of complementary RNA strands (pink) by a viral enzyme. 3 Viral genome (RNA) Template 5 Complementary RNA strands also function as mRNA, which is translated into both capsid proteins (in the cytosol) and glycoproteins for the viral envelope (in the ER). mRNA Capsid proteins ER Glycoproteins New copies of viral genome RNA are made using complementary RNA strands as templates. 4 Copy of genome (RNA) Vesicles transport 6 envelope glycoproteins to the plasma membrane. 8 New virus 7 A capsid assembles around each viral genome molecule. The structure of HIV, the retrovirus that causes AIDS Glycoprotein Viral envelope Capsid Reverse transcriptase RNA (two identical strands) The reproductive cycle of HIV, a retrovirus HIV Membrane of white blood cell 1 The virus fuses with the cell’s plasma membrane. The capsid proteins are removed, releasing the viral proteins and RNA. 2 Reverse transcriptase catalyzes the synthesis of a DNA strand complementary to the viral RNA. HOST CELL Viral RNA 3 Reverse transcriptase catalyzes the synthesis of a second DNA strand complementary to the first. RNA-DNA hybrid 4 Reverse transcriptase The double-stranded DNA is incorporated as a provirus into the cell’s DNA. 0.25 µm HIV entering a cell DNA NUCLEUS Chromosomal DNA Provirus 5 Proviral genes are transcribed into RNA molecules, which serve as genomes for the next viral generation and as mRNAs for translation into viral proteins. RNA genome for the next viral generation mRNA 6 The viral proteins include capsid proteins and reverse transcriptase (made in the cytosol) and envelope glycoproteins (made in the ER). 8 9 New HIV leaving a cell New viruses bud off from the host cell. Capsids are assembled around viral genomes and reverse transcriptase molecules. 7 Vesicles transport the glycoproteins from the ER to the cell’s plasma membrane. Potato Viroids Model for how prions propagate Prion Original prion Many prions Normal protein New prion Viruses and Cancer Mechanisms of Gene Transfer • Transformation- take up foreign DNA from the environment • Let’s check out the animations! Mechanisms of Gene Transfer • Transduction – bacteriophages carry bacterial genes from host cells to another cell • Let’s check out the animations! Mechanisms of Gene Transfer • Conjugation- direct transfer of genetic material (segment of DNA or plasmid) between 2 bacterial cells that are temporally joined. • “bacteria sex” • Sex pili – bacteria has F factor • Let’s watch the animation! Mechanisms of Gene Transfer • Transposition – movement of a chromosome or plasmid within a bacteria • Transposable elements – a sequence of DNA that can move its position • Barbara McClintock 1983 –Jumping Genes won her a Nobel Prize. She worked with maize (corn). Genes don’t really jump! They change locations due to folding of DNA. • Animations! Review Questions 1. Viruses are not classified as prokaryotes because: A. B. C. D. E. They contain membrane bound organelles They are multicellular They are unicellular They are acellular They lack genetic material 2. Which of the following can be found in all viruses: A. B. C. D. E. Ribosomes RNA DNA A Protein Coat Cell membrane 3. The virus HIV replicates using reverse transcriptase. Thus it can be inferred that the virus A. Uses only DNA B. Uses only RNA C. Uses RNA as a template for DNA D. Uses DNA as a template for RNA E. Replicates continuously Viral Defenses Dengue Invasion Video