"Using the KEGG Database Resource". In: Current Protocols in
... d. The Gene name line lists the general gene names by which this entry is known. e. The Definition line describes this entry in human-readable terms. f. The KO line contains a hyperlink to the KO (KEGG Ortholog) entry to which this gene belongs. It also contains links to its corresponding “OC search ...
... d. The Gene name line lists the general gene names by which this entry is known. e. The Definition line describes this entry in human-readable terms. f. The KO line contains a hyperlink to the KO (KEGG Ortholog) entry to which this gene belongs. It also contains links to its corresponding “OC search ...
Comparative genomics of unintrogressed Campylobacter coli clades 2 and 3
... [56]. The OrthoMCL output was filtered to produce different lists of ortholog/paralog groups which contained: (i) tCDSs from all C. coli strains (core genome); (ii) tCDS from all the genomes of a clade; (iii) tCDSs from all the genomes of a clade and missing in the other clades; (iv) tCDSs from at l ...
... [56]. The OrthoMCL output was filtered to produce different lists of ortholog/paralog groups which contained: (i) tCDSs from all C. coli strains (core genome); (ii) tCDS from all the genomes of a clade; (iii) tCDSs from all the genomes of a clade and missing in the other clades; (iv) tCDSs from at l ...
Isolation, Characterization and Complementation
... In summary, only two of the mutant classes described by Abou-JaoudC et al. (1978a) were deficient in their ability to reduce nitrite and only the nirD strain was defective in NADHdependent nitrite reductase activity. The phenotype of LCB82 was identical to that of strain JCB203, but although both of ...
... In summary, only two of the mutant classes described by Abou-JaoudC et al. (1978a) were deficient in their ability to reduce nitrite and only the nirD strain was defective in NADHdependent nitrite reductase activity. The phenotype of LCB82 was identical to that of strain JCB203, but although both of ...
Genetics of the shaded American Shorthair
... orange gene) than it does on black pigment in all breeds. Because of this complexity, this paper deals predominantly with black pigmented (shaded silver) cats. The effect of the silver gene in combination with the red can be exaggerated. To Stripe or Not to Stripe - the major unpatterned tabby gene ...
... orange gene) than it does on black pigment in all breeds. Because of this complexity, this paper deals predominantly with black pigmented (shaded silver) cats. The effect of the silver gene in combination with the red can be exaggerated. To Stripe or Not to Stripe - the major unpatterned tabby gene ...
Protein Purification by Inverse Transition Cycling
... ions and their concentrations). Examples of the effects of these two factors on the Tt for a given ELP construct are shown in Figures 2 and 3. Because the Tt decreases logarithmically with increasing concentration (Fig. 2), the effect of ELP concentration is of greatest practical importance at conce ...
... ions and their concentrations). Examples of the effects of these two factors on the Tt for a given ELP construct are shown in Figures 2 and 3. Because the Tt decreases logarithmically with increasing concentration (Fig. 2), the effect of ELP concentration is of greatest practical importance at conce ...
Premature stop codons involved in muscular dystrophies
... muscular dystrophy (CMD) patients, using a very sensitive dual reporter gene system.16 This experimental model closely corresponds to the physiological situation, in which a given mutation is embedded in a unique nucleotide context, and differs between patients. Several reasons indicated an investig ...
... muscular dystrophy (CMD) patients, using a very sensitive dual reporter gene system.16 This experimental model closely corresponds to the physiological situation, in which a given mutation is embedded in a unique nucleotide context, and differs between patients. Several reasons indicated an investig ...
Genetics of the shaded American Shorthair
... and chinchilla patterns are grouped together as shaded cats in this paper, since the difference between the shaded and chinchilla cats varies only in one pattern attribute, the width of the white undercoat. Evidence of a pattern or barring on the legs, neck, and tail or, worse, on the body is effec ...
... and chinchilla patterns are grouped together as shaded cats in this paper, since the difference between the shaded and chinchilla cats varies only in one pattern attribute, the width of the white undercoat. Evidence of a pattern or barring on the legs, neck, and tail or, worse, on the body is effec ...
Auxin signals — turning genes on and turning cells around
... auxin-response genes [4]. In Arabidopsis, these include several families of well-characterized genes [5], including many of the 29 members of the Aux/IAA gene family. Aux/ IAA genes encode small nuclear proteins that have a common four-domain (I–IV) structure (Figure 1a). They are not only subject t ...
... auxin-response genes [4]. In Arabidopsis, these include several families of well-characterized genes [5], including many of the 29 members of the Aux/IAA gene family. Aux/ IAA genes encode small nuclear proteins that have a common four-domain (I–IV) structure (Figure 1a). They are not only subject t ...
Variant Effect Predictor Web interface Documentation
... CCDS - add the Consensus CDS transcript identifier where available. Equivalent to --ccds Protein - add the Ensembl protein identifer (ENSP). Equivalent to --protein Uniprot - add identifiers for translated protein products from three UniProt -related databases (SWISSPROT, TREMBL and UniParc). Equiva ...
... CCDS - add the Consensus CDS transcript identifier where available. Equivalent to --ccds Protein - add the Ensembl protein identifer (ENSP). Equivalent to --protein Uniprot - add identifiers for translated protein products from three UniProt -related databases (SWISSPROT, TREMBL and UniParc). Equiva ...
Interleukin?1 gene cluster variants with innate cytokine production
... OA contributes to symptoms and augments many pathologic changes has become generally accepted (16,17); however, it is unclear whether this is a causal association or marks the ongoing disease process. Furthermore, the interplay between secreted IL-1 and IL-1Ra levels must be taken into account, sin ...
... OA contributes to symptoms and augments many pathologic changes has become generally accepted (16,17); however, it is unclear whether this is a causal association or marks the ongoing disease process. Furthermore, the interplay between secreted IL-1 and IL-1Ra levels must be taken into account, sin ...
documentation in PDF format
... CCDS - add the Consensus CDS transcript identifier where available. Equivalent to --ccds Protein - add the Ensembl protein identifer (ENSP). Equivalent to --protein Uniprot - add identifiers for translated protein products from three UniProt -related databases (SWISSPROT, TREMBL and UniParc). Equivale ...
... CCDS - add the Consensus CDS transcript identifier where available. Equivalent to --ccds Protein - add the Ensembl protein identifer (ENSP). Equivalent to --protein Uniprot - add identifiers for translated protein products from three UniProt -related databases (SWISSPROT, TREMBL and UniParc). Equivale ...
Charles K. Wairuri , Jacquie E. van der Waals
... of a eukaryotic cell is an important step for successful infection, and also a prerequisite for ...
... of a eukaryotic cell is an important step for successful infection, and also a prerequisite for ...
Document
... (complete sequencing by NGS) As experts in human genetic testing, with more than 25 years of experience, we have developed NextGeneDx®, a new NGS-based technology designed to obtain the complete and specific DNA sequence of a simultaneous number of genes involved in inherited diseases. ...
... (complete sequencing by NGS) As experts in human genetic testing, with more than 25 years of experience, we have developed NextGeneDx®, a new NGS-based technology designed to obtain the complete and specific DNA sequence of a simultaneous number of genes involved in inherited diseases. ...
THE GENETICS AND REPRODUCTIVE ISOLATING MECHANISMS
... and ochsenheimeri Stgr., but in Pieris melete Men. too. Spring napi females which show a more marked gray suffusion along the veins than is usual in this species are also distinguishable by the lack of this streak. The distinction between a slightly marked heterozygous bryonice female and a more str ...
... and ochsenheimeri Stgr., but in Pieris melete Men. too. Spring napi females which show a more marked gray suffusion along the veins than is usual in this species are also distinguishable by the lack of this streak. The distinction between a slightly marked heterozygous bryonice female and a more str ...
Thiele et al.: `Genome-scale reconstruction of E. coli`s transcriptional
... formula of C10H8O5 and C9H9O4. Such compounds were not found in the SimPheny or other databases nor reported in literature. If the conversion is from glutamine to glutamate and is mediated by chorismate the OH group is replaced by a NH2 group. This might be a possibility. It has at least been demons ...
... formula of C10H8O5 and C9H9O4. Such compounds were not found in the SimPheny or other databases nor reported in literature. If the conversion is from glutamine to glutamate and is mediated by chorismate the OH group is replaced by a NH2 group. This might be a possibility. It has at least been demons ...
Histological classification and molecular genetics of meningiomas
... diagnosed in pathology specimens are meningothelial, fibrous, and transitional meningioma (figure 1, panel 1). Meningothelial meningiomas are histologically composed of characteristic uniform tumour cells that form lobules surrounded by thin collagenous septae. Within the lobules, epithelioid tumour c ...
... diagnosed in pathology specimens are meningothelial, fibrous, and transitional meningioma (figure 1, panel 1). Meningothelial meningiomas are histologically composed of characteristic uniform tumour cells that form lobules surrounded by thin collagenous septae. Within the lobules, epithelioid tumour c ...
Genetics of asthma and atopy Koppelman, Gerard
... coworkers hypothesised that bacterial signals play a functional role in the maturation of the TH-1 type immune response, thereby suppressing the TH-2 type response, which may produce an atopic phenotype. Microbial products, such as lipopolysaccharides (LPS), can provide activation signals for TH-1 m ...
... coworkers hypothesised that bacterial signals play a functional role in the maturation of the TH-1 type immune response, thereby suppressing the TH-2 type response, which may produce an atopic phenotype. Microbial products, such as lipopolysaccharides (LPS), can provide activation signals for TH-1 m ...
Distribution and phylogenies of enzymes of the Embden
... has gained wide acceptance, although it has detractors. However, even a putative RNA-based “organism” could have arisen only from a prebiotic chemical environment conducive to its existence (Poole et al. 1999). Although these theories and their associated predictions have done much to provide explan ...
... has gained wide acceptance, although it has detractors. However, even a putative RNA-based “organism” could have arisen only from a prebiotic chemical environment conducive to its existence (Poole et al. 1999). Although these theories and their associated predictions have done much to provide explan ...
Distribution and structural variation of the she pathogenicity island in
... A third putative virulence gene, pic, encoding a mucinase with haemagglutinin activity [7], is also carried on the PAI [1]. The complete nucleotide sequence and genetic organisation of the she PAI was determined recently and revealed that it has many of the features that are characteristic of PAIs f ...
... A third putative virulence gene, pic, encoding a mucinase with haemagglutinin activity [7], is also carried on the PAI [1]. The complete nucleotide sequence and genetic organisation of the she PAI was determined recently and revealed that it has many of the features that are characteristic of PAIs f ...
CCA Summer 2004 Newsletter - Children`s Craniofacial Association
... (spontaneous gene mutation), and 70 percent of people with CCD have an affected parent. The condition is highly variable from one affected person to another. A brief review of chromosomes and genes may be helpful at this point. Genes are the basic units of heredity, and they are present in almost ev ...
... (spontaneous gene mutation), and 70 percent of people with CCD have an affected parent. The condition is highly variable from one affected person to another. A brief review of chromosomes and genes may be helpful at this point. Genes are the basic units of heredity, and they are present in almost ev ...
Lopes2012 - Edinburgh Research Archive
... Lopes, B., A. Hamouda, S. Amyes. The role of IS30 in the expression of the blaADC gene in Acinetobacter baumannii (Poster, ECCMID 2011, Milan, Italy) Lopes, B., A. Hamouda, S. Amyes. The utilisation of gluconic acid in certain strains of Acinetobacter baumannii (Abstract, ECCMID 2011, Milan, Italy) ...
... Lopes, B., A. Hamouda, S. Amyes. The role of IS30 in the expression of the blaADC gene in Acinetobacter baumannii (Poster, ECCMID 2011, Milan, Italy) Lopes, B., A. Hamouda, S. Amyes. The utilisation of gluconic acid in certain strains of Acinetobacter baumannii (Abstract, ECCMID 2011, Milan, Italy) ...
Using the braille Science code
... Circuit diagram symbols . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5. Genetics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ...
... Circuit diagram symbols . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5. Genetics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ...
by Vanessa Di Gioacchino A thesis submitted to the Department of Biology
... Mental illness is prevalent in our population and has been studied for decades but is still poorly understood. Understanding the genetic and biological mechanisms underlying these disorders can lead to significant improvements in diagnosis, treatment, and quality of life for patients suffering from ...
... Mental illness is prevalent in our population and has been studied for decades but is still poorly understood. Understanding the genetic and biological mechanisms underlying these disorders can lead to significant improvements in diagnosis, treatment, and quality of life for patients suffering from ...
Regulation of Cytochrome bd Expression in Mycobacterium
... Rhodococcus and Nocardia have related properties. There are over 100 species that belong to the genus Mycobacterium and 16S rRNA sequence analyses reveals that all mycobacterial species are closely related (143, 159). Mycobacteria have been found to be widely distributed in the environment and most ...
... Rhodococcus and Nocardia have related properties. There are over 100 species that belong to the genus Mycobacterium and 16S rRNA sequence analyses reveals that all mycobacterial species are closely related (143, 159). Mycobacteria have been found to be widely distributed in the environment and most ...
Identification of a Cis-Acting Element of ART1, a
... we prepared the narrowest 30-bp probe STAR1-cis1 (2358 to 2329) and a series of probes (STAR1-M1 to -M9) by substitution of two or six bases at the position between 2352 and 2329 in STAR1-cis1 (Fig. 3A). The binding ability of ART1 protein with these substituted probes was examined by the competitio ...
... we prepared the narrowest 30-bp probe STAR1-cis1 (2358 to 2329) and a series of probes (STAR1-M1 to -M9) by substitution of two or six bases at the position between 2352 and 2329 in STAR1-cis1 (Fig. 3A). The binding ability of ART1 protein with these substituted probes was examined by the competitio ...