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Supplementary Table 2. Summary of the fifty-seven gene-function correlated schizophrenia susceptibility genes in context of thalamic neurons. “+” in “association result”: positive finding of at least one SNP in at least one association study attempted for the target gene. “+” in “qPCR result”: pvalue < 0.05 by Welch test. NA: not assayed. Chromosome Gene Symbol ADSS 1 Locus ID 159 Protein Name Association Result qPCR Result adenylosuccinate synthase - NA 1 ASTN1 460 astrotactin + - 1 GCLM 2730 glutamate-cysteine ligase regulatory protein + - 1 TSNAX 7257 translin-associated factor X + - 2 ACP1 52 acid phosphatase 1 - NA 2 CTNNA2 1496 catenin, alpha 2 + + 2 GLS 2744 glutaminase C - NA 2 INPP1 3628 inositol polyphosphate-1-phosphatase - NA 2 IRS1 3667 insulin receptor substrate 1 - NA 2 PPP3R1 5534 protein phosphatase 3, regulatory subunit B, alpha isoform 1 - NA 2 SLC25A12 8604 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 - NA 3 CHL1 10752 cell adhesion molecule with homology to L1CAM + + 3 GAP43 2596 growth associated protein 43 - NA 3 MAP4 4134 microtubule-associated protein 4 + - 3 PIK3CB 5291 phosphoinositide-3-kinase, catalytic, beta polypeptide - NA 4 PDLIM5 10611 PDZ and LIM domain 5 + NA 5 CANX 821 calnexin - NA 5 CARTPT 9607 cocaine- and amphetamine-regulated transcript - NA 5 KIF2A 3796 kinesin heavy chain member 2 - NA 5 NR3C1 2908 nuclear receptor subfamily 3, group C, member 1 - NA 5 PPP2R2B 5521 beta isoform of regulatory subunit B55, protein phosphatase 2 - NA 5 RAPGEF6 51735 6 C4A/C4B 6 SLC25A27 9481 6 TCP1 8 PDZ domain-containing guanine nucleotide exchange factor I + - + + solute carrier family 25, member 27 + + 6950 T-complex protein 1 + + FZD3 7976 frizzled 3 + NA 8 NEFL 4747 neurofilament, light polypeptide 68kDa - NA 8 NEFM 4741 neurofilament 3 - NA 8 PCM1 5108 pericentriolar material 1 + - 8 PPP3CC 5533 protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform (calcineurin A gamma) + NA 9 SLC1A1 6505 solute carrier family 1, member 1 - NA 9 SMARCA2 6595 SWI/SNF-related matrix-associated actindependent regulator of chromatin a2 - NA 10 BLOC1S2 282991 biogenesis of lysosome-related organelles complex1, subunit 2 - NA 10 INPP5A 3632 inositol polyphosphate-5-phosphatase A - NA 10 NRG3 10718 neuregulin 3 + - 10 PGAM1 5223 phosphoglycerate mutase 1 (brain) - NA 10 SLC18A2 6571 solute carrier family 18 (vesicular monoamine), member 2 + + 11 GRIA4 2893 glutamate receptor, ionotrophic, AMPA 4 + - 12 CNTN1 1272 contactin 1 - NA 13 ESD 2098 esterase D/formylglutathione hydrolase + + 13 FGF14 2259 fibroblast growth factor 14 + NA 14 DAAM1 23002 dishevelled-associated activator of morphogenesis 1 - NA 14 EIF2B2 8892 eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa - NA 15 NTRK3 4916 neurotrophic tyrosine kinase, receptor, type 3 + - 720/721 complement component 4A/4B 15 PLDN 26258 pallidin - NA 16 HP 3240 haptoglobin + NA 17 PAFAH1B1 5048 platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit - NA 18 ADCYAP1 116 adenylate cyclase activating polypeptide + - 18 GNAL 2774 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type + - 20 CHGB 1114 chromogranin B + + 20 DPM1 8813 dolichyl-phosphate mannosyltransferase polypeptide 1 - NA 20 PRNP 5621 prion protein - NA 21 SYNJ1 8867 synaptojanin 1 - NA 22 ST13 6767 heat shock 70kD protein binding protein - NA 22 UBE2L3 7332 ubiquitin-conjugating enzyme E2L 3 - NA 23 SLC25A14 9016 solute carrier family 25, member 14 - NA