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IB Biology / IHS / Rev 16-17 Way to Go, Indigo! The Basic Assay Adapted from Diane Sweeney, “Way to Go, Indigo!” Exploring Life Lab Manual © 2002 Special thanks to Mr. Art Roberson, Technical Sales Manager at Genencor International, for donating IndiAge Super GX Plus enzyme and providing technical assistance! Materials Equipment Reagents & consumables Part 1. Part 1. Sharpie™ marker two 250-mL beakers two graduated cylinders two forceps PPE: goggles, aprons Part 2. two plastic wash basins and 400-mL beakers two scrubbers PPE: goggles, aprons magnifier or dissecting microscope fabric cutting station: dark denim fabric & scissors IndiAge solution (2% IndiAge in pH 5 buffer) pH 5 buffer Ziploc™ bags label tape envelope Part 2. paper towels PPE: nitrile gloves 55oC water (~1200 mL/group), heated in water bath Part 1. 1. Cut a 3 in. x 9 in.* piece of dark denim. Then, cut it into thirds, giving you three 3 in. x 3 in. swatches. 2. To distinguish the experimental denim swatch (the one you will treat with IndiAge), cut off one of its corners. Leave a 2nd swatch (it will be Control 1) uncut. Write “C2” (for Control 2) on the back of the 3rd denim swatch with a Sharpie™ and save it in an envelope labeled with your team letter until Day 2. 3. Label one beaker or large cup, “Buffer with IndiAge.” Label a second beaker or cup, “Buffer Only.” 4. In each beaker stand up a small Ziploc™ bag. Pour 200 mL of buffer with IndiAge solution into the bag in the “Buffer with IndiAge” beaker, and 200 mL of pH 5 buffer into the “Buffer Only” bag. 5. Using forceps, lower the denim swatch with the cut corner into the “Buffer with IndiAge” bag. Lower the Control 1 swatch in the beaker labeled “Buffer Only.” Push air out and zip both bags closed. 6. Allow the two denim swatches to incubate at room temperature for 3-4 days. Part 2. 7. Remove both swatches from their beakers. Keeping them SEPARATE, rinse the swatches WELL under HOT running water. NOTE: The baggies’ liquids must be neutralized with baking soda before disposal. In denim processing facilities, jeans are placed in industrial washers to break the hydrolyzed cellulose fibers and release indigo molecules. We’ll hand wash our swatches with scrubbers to simulate this process! 8. Put on nitrile gloves so your hands don’t turn blue. 9. Put the denim swatches in separate basins with 400 mL hot (55oC) water each. Scrub each of the swatches with a scrubber underneath the water. Lift them out and squeeze repeatedly. Continue scrubbing the swatches for 12 full minutes, changing the water every 4 min. Try to give both swatches the same all-over scrubbing and squeezing treatment. 10. Wring out the swatches one last time and lay them flat on layers of paper towel to dry overnight. 11. Compare all three denim swatches when dry. If time permits, use a magnifying glass or stereoscope to look for differences in the fibers. What macroscopic or microscopic effect(s) did IndiAge have?