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0.008
0.006
0.004
0.002
0.000
Probability
0.010
0.012
0.014
Fragment Length Distribution
200
400
600
800
Fragment Length
Mode = 186, Mean = 207.1, and Std = 73.7
1000
1.0
0.8
0.6
Probability
1.2
1.4
Read Length Distribution
50
60
70
80
90
Read Length
Mode = 75, Mean = 75.0, and Std = 0.0
100
0.04
0.02
0.00
Probability
0.06
0.08
Read Start Position Distribution
1
2
3
4
5
6
7
8
9
10
11
Bin #
12
13
14
15
16
17
18
19
20
●
A
C
G
T
●
●
15
●
●
5
10
●
0
Observed Quality
20
25
Observed Quality vs. Phred Quality Score
●
5
10
15
20
Phred Quality Score
25
30
35
1e+07
Alignment statistics
8e+06
Unique 39%
6e+06
Unalignable 13%
2e+06
4e+06
Filtered 0%
0e+00
Number of reads
Multi 48%
0 2 4 6 8
11
14
17
20
23
26
29
32
Number of alignments per read
35
38
41
Inf