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Molecular Basis Of Inheritance Timothy G. Standish, Ph. D. ©2000 Timothy G. Standish Transformation Of Bacteria Two Strains Of Streptococcus Rough Strain (Harmless) Capsules Smooth Strain (Virulent) ©2000 Timothy G. Standish Transformation Of Bacteria The Griffith Experiment OUCH! + Control - Control - Control Experimental ©2000 Timothy G. Standish Avery, MacLeod and McCarty 1944 Avery, MacLeod and McCarty repeated Griffith’s 1928 experiment with modifications designed to discover the “transforming factor” Extracts from heat-killed cells were digested with hydrolytic enzymes specific for different classes of macro molecules: Enzyme Transformation? Lippase Yes Protease Yes Saccharase Yes Nuclease No ©2000 Timothy G. Standish The Hershey-Chase Experiment The Hershey-Chase experiment showed definitively that DNA is the genetic material Hershey and Chase took advantage of the fact that T2 phage is made of only two classes of macromolecules: Protein and DNA H H2N C C CH2 CH2 S CH3 H O H2N C C OH Methionine CH2 SH OH O OH Cysteine Some amino acids contain sulfur, thus proteins contain sulfur, but not phosphorous. HO P NH2 O O OH H Nucleotides contain phosphorous, thus DNA contains phosphorous, but not sulfur. ©2000 Timothy G. Standish S35 T2 grown in containing media incorporate S35 into their proteins Using S35 Bacteria grown in T2 attach to bacteria and inject genetic material normal nonradioactive media When centrifuged, phage protein coats remain in the supernatant while bacteria form a pellet The supernatant is radioactive, but the pellet is not. Blending causes phage protein coat to fall off Did protein enter the bacteria? Is protein the genetic material? P32 T2 grown in containing media incorporate P32 into their DNA Using P32 Bacteria grown in T2 attach to bacteria and inject genetic material normal nonradioactive media When centrifuged, phage protein coats remain in the supernatant while bacteria form a pellet The pellet is radioactive, but the supernatant is not. Blending causes phage protein coat to fall off Did DNA enter the bacteria? Is DNA the genetic material? A Nucleotide Adenosine Mono Phosphate (AMP) Phosphate HO H+ Nucleotide OH P O Base N H O 5’CH2 4’ NH2 H N O 1’ Sugar 3’ OH 2’ H OH N N Nucleoside Purines NH2 Adenine N N N O CH3 (DNA) N Guanine NH N Thymine O NH2 Uracil (RNA) NH N O N N Pyrimidines NH O N O NH2 Cytosine N N O Base Pairing Guanine And Cytosine - + + + - Base Pairing Adenine And Thymine + - Adenine - + Thymine Base Pairing Adenine And Cytosine + - - Base Pairing Guanine And Thymine + + P HO NH2 O N O CH2 OH N N O H N O CH2 O HO P O O N O CH2 OH H H2O NH N O OH P O H O NH2 N O CH2 O H O H H2O N O CH2 N O O O CH2 O P HO H O OH HO P NH2 OH P O H O HO O D N A OH - - - - - - G - 3.4 nm 1 nm - - Minor groove C G C T A A T - The Watson - Crick Model Of DNA G C T A C G A T Major groove A T C G G C 0.34 nm T A - - - - - - - - - - - ©2000 Timothy G. Standish - B DNA Forms of the Double Helix G T A Minor groove Z DNA A T C G C A DNA 3.9 nm 0.8 nm Minor groove G C T A C G A T Major groove A T G T A A T C G G C T A A T 1.2 nm 2.8 nm G C T A C Major groove G T A G C C G C C G A T A T G C 0.26 nm 0.34 nm 10.4 Bp/turn +34.6o Rotation/Bp 11 Bp/turn +34.7o Rotation/Bp 12 Bp/turn -30.0o Rotation/Bp ©2000 Timothy G. Standish Supercoiling Open circle DNA with no supercoiling Negatively (twisting to the left) supercoiled DNA Opened negatively supercoiled DNA Opening negatively supercoiled DNA may contribute to strand separation ©2000 Timothy G. Standish Distribution Of Negative Charge Prevents DNA Annealing O - -O P NH2 O N O CH2 OH N N O H N O CH2 O -O P O O N O CH2 O H NH N O O- P O H O NH2 N O CH2 O H O N O CH2 N O O O CH2 O OH H O P NH2 O- P O -O O H O P O- O- Salts Allow DNA Annealing O-O P NH2 O N O CH2 OH N N O H N NaCl O CH2 O H O H O -O P NH2 N NH2 O N O CH2 N O OH H O O Cat ions can cancel out the negative charge carried on the sugar phosphate backbone. CH2 O- P O O CH2 O N Na+ O CH2 NH H N O O H O O O P O- P O O O -O Cl- P O- O- Salts Allow DNA Annealing Na+ ONa+ -O P NH2 O N O CH2 OH N N O H N O CH2 O Na+ -O P O O N O CH2 N O NH2 N Na+ O H NH O- P O H O Na+ O CH2 O O N O CH2 N O O O CH2 O OH H O P NH2 H -O Na+ O- P O Na+ O H O P O- ONa+ Na+ Salts Allow DNA Annealing Na+ ONa+ -O P NH2 O N O CH2 OH N N O H N O CH2 O Na+ -O P O O N O CH2 Na+ O H NH N O O- P O H O NH2 N O CH2 O O N O CH2 N O O O CH2 O OH H O P NH2 H -O Na+ O- P O Na+ O H O P O- ONa+ Na+ 5’AA3’ Base Stacking 3’UU5’ ©2000 Timothy G. Standish Base Stacking 5’AU3’ 3’UA5’ ©2000 Timothy G. Standish AZT 3’-Azido-3’-deoxythymidine O CH3 Thymine NH OH N CH2 O O Deoxy ribose N3 H ©2000 Timothy G. Standish ©2000 Timothy G. Standish