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LAB 4: ASEPTIC TECHNIQUE AND ISOLATION OF BACTERIA Microorganisms to be used this semester: Many of the microorganisms we will use this semester will be Biosafety Level 1 (not shown to cause disease in humans) but several will be Biosafety Level 2 (can cause disease in humans). Because of this potential risk we ask that you treat ALL bacterial cultures as if they cause infection! ASEPTIC TECHNIQUE TERMS • Aseptic Technique: – Procedure to prevent contamination of medium or bench surface. • Pure culture: – Contains only 1 type of microorganism • Mixed culture: – Contains 2 or more types of microorganisms living/growing together ASEPTIC TECHNIQUE TERMS • Inoculation: – Act of placing bacteria (and other microorganisms) onto culture medium. • Contaminant: – Unwanted microbes present in culture medium or lab bench surface. • Sterile Media: – Media prepared and then sterilized prior to use. – Always inspect media to ensure no visible contaminants are present prior to use. – Media is sterilized by autoclaving or filtration during preparation DEVICES FOR PERFORMING ASEPTIC TECHNIQUE Inoculating Loop (a)/Needle (b): Metal wire used to transfer organisms. Incinerator: Heat source that is used to remove any unwanted microorganisms on the inoculating loop/needle. TYPES OF MEDIA ENRICHED – selects for certain microorganisms by including a nutrient that the desired microorganism or group can use and its competitors can not SELECTIVE – selects for growth of certain microorganisms in a mixed population by using an ingredient that inhibits the growth of other microorganisms, but not the desired species or group DIFFERENTIAL – does not select for any particular group by inhibiting or enhancing their growth over competitors, but it does show a visible difference between or among groups of microorganisms NOTE: MEDIA CAN BE 1, 2, OR ALL OF THE ABOVE MEDIA TYPES AND USES • BROTH: a liquid medium. Advantage: tube is easy to store and transport. Disadvantage: can not see colony morphology. • SLANT: tube of solid medium at an angle. Advantage: tube is easy to store and transport, can see colony morphology. Disadvantage: small surface area. • AGAR DEEP: tube of solid or semi-solid medium. Good for organisms that prefer reduced O2 and to evaluate motility. Broth Slant Agar deep MEDIA TYPES AND USES • PETRI DISH/PLATE: SOLID MEDIUM ON A FLAT SURFACE. • This is the MOST COMMON METHOD TO OBSERVE COLONY MORPHOLOGY AND TO WORK WITH INDIVIDUAL COLONIES FOR DIAGNOSTIC METHODS. Removing inoculum from broth: Removing inoculum from a solid medium: INOCULATING BACTERIA ON AN AGAR SLANT DO NOT gouge the agar with the inoculating loop, instead gently graze the surface. INOCULATING BACTERIA INTO A DEEP AGAR Stab the needle containing bacteria directly into and straight out of the deep agar. INOCULATING A PLATE: THE STREAK PLATE TECHNIQUE URINE PLATE TECHNIQUE CALIBRATED LOOP: 0.001 uL vs. 0.01 uL Inoculation: dip calibrated loop in urine, streak down middle of agar plate, then with the same loop go back and streak across the center inoculum to dilute URINE TYPE Non-invasive urine examples: • Clean-voided • Foley catheter • Ileal loop Invasive urine examples: •Straight catheter •Cystoscopic • Kidney LOOP COLONY COUNT (cfu/mL) Green LOOP •0.001 mL •1/1000th of a mL 1 colony = 1,000 cfu/mL Blue LOOP • 0.01 mL • 1/100th of a mL 1 colony = 100 cfu/ml THE STREAK PLATE TECHNIQUE THE PURPOSE IS TO DILUTE OUT AND SEPARATE THE BACTERIA PRESENT TO GET ISOLATED COLONIES. WHY IS THE STREAK PLATE ISOLATION METHOD IMPORTANT • SAMPLES FROM PATIENTS OR THE ENVIRONMENT ARE NOT ‘PURE’, I.E. ONE TYPE OF MICROORGANISM PRESEND. SAMPLES USUALLY CONTAIN MIXTURES OF MULTIPLE TYPES OF BACTERIA. • LABORATORY IDENTIFICATION AND SUSCEPTIBILITY TECHNIQUES REQUIRE A PURE CULTURE OF A SINGLE MICROORGANISM. • THE STREAK PLATE ISOLATION METHOD ALLOWS ONE TO SEPARATE OUT INDIVIDUAL BACTERIAL COLONIES. IMPROPER STREAK PLATE TECHNIQUE PATTERNS OF GROWTH IN BROTH PATTERNS OF GROWTH ON A SLANT PATTERNS OF GROWTH IN AGAR DEEP PATTERNS OF GROWTH ON AN AGAR PLATE The 0.001 calibrated loop was used. Given the selections, what is the number of cfu/mL in the original sample? A. 1000 - 9000 B. 10,000 – 50,000 C. >10,000 The 0.01 calibrated loop was used. What is the number of cfu/mL in the original sample? A. 10 B. 100 C. 1,000 D. 10,000