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UNIT 3 Chapter 9: Cellular Respiration Chapter 10: Photosynthesis Chapter 11: Cell Communication The Basics The sun is the ultimate source of energy for all living things Light energy trapped in organic molecules Trapped energy available to autotrophs and heterotrophs Cellular Respiration & Fermentation Catabolic pathways can proceed with or without oxygen present Fermentation occurs when oxygen is NOT present Cellular respiration occurs with oxygen and is much more efficient than fermentation Most of cellular respiration occurs in the mitochondria Organic molecules + O2 CO2 + H20 + energy ATP Hydrolysis & Redox Reactions The removal of a phosphate group from ATP releases energy Phosphorylation is a common tool used to power reactions Redox (reduction-oxidation) reactions release energy when electrons are moved Loss of electrons = oxidation Gain of electrons = reduction Redox reactions are used to synthesize ATP Creating NaCl (table salt) is a redox reaction: Na + Cl Na+ + Cl- The electron donor is called the reducing agent and the electron recipient is called the oxidizing agent Na + Cl Na+ + Cl- The Function of Coenzymes Glucose is not simply broken down in a single step to yield energy Steps to break down components of glucose using specific enzymes Hydrogen atoms and electrons ripped off of glucose and given to coenzymes like NAD+ Nicotinamide Adenine Dinucleotide H-C-OH + NAD+ CO2 + NADH + H+ Steps of Cellular Respiration Cellular respiration involves three steps: Glycolysis The Krebs cycle The Electron transport chain and oxidative phosphorylation Glycolysis – An Overview Glycolysis occurs in the cytoplasm Glucose is split into two three-carbon sugars Sugars are oxidized and rearranged to form pyruvate 10 steps of glycolysis are catalyzed by specific enzymes Energy phase investment phase and energy payoff Energy investment ATP provides energy to phosphorylate glucose 2 ATP per glucose Energy payoff 4 ATP and 2 NADH are produced per glucose Glycolysis produces a net of 2 ATP and 2 NADH Happens with or without oxygen and no CO2 is produced However, if oxygen is present, pyruvate molecules can move in to the Krebs cycle NADH will play a role later in the process (the electron transport chain) The Krebs Cycle Pyruvate still holds a lot of the original glucose molecule’s chemical energy Pyruvate enters the mitochondria and is modified CO2 removed to produce acetyl CoA Each pyruvate used to produce: 1 acetyl CoA, which is used to produce: 1 ATP 3 NADH 1 FADH2 (an electron transport carrier similar to NADH) The Electron Transport Chain (E.T.C.) Respiration ultimately produces 38 ATP (max), but so far, only 4 have been produced 8 NADH and 2 FADH2 molecules enter the electron transport chain The electrons are used to power ATP synthesis Each mitochondrion has thousands of sets of the E.T.C. in the cristae The electron transport chain shuttles electrons from NADH towards increasingly more electronegative atoms, ultimately to oxygen Process occurs in inner membrane of mitochondria Oxygen “captures” eand H+ to make water Electrons from NADH and FADH2 are ultimately passed off to oxygen For every two electron carriers (4 electrons), one O2 molecule is reduced 2 H2O The electrons moving down the E.T.C. are used to pump H+ ions into the inter membrane space of the mitochondrion H+ ion gradient is created and is referred to as proton-motive force An H+ ions diffuse back into the mitochondrial matrix through ATP Synthase As H+ ions move through ATP Synthase, that protein shifts its conformation Shift joins a phosphate group to ADP That entire process is called chemiosmosis Chemiosmosis occurs in plants also, but it is driven by light energy Intermembrane Space + + + + + + + + NAD+ O + + Matrix + + + + + + H P P P P H + + Summary of Cellular Respiration Fermentation Some cells can produce ATP whether oxygen is present (aerobic) or not (anaerobic) Two types of fermentation exist: Alcoholic fermentation Lactic acid fermentation In alcoholic fermentation, pyruvate is ultimately converted to ethanol In lactic acid fermentation, pyruvate is converted into lactic acid Some organisms, like bacteria and yeast can produce enough ATP to survive These organisms are called facultative anaerobes Human muscle cells can behave as facultative anaerobes, for a very short time Cori Cycle The presence of oxygen allows for the production of up to 38 ATP molecules, but without oxygen, only 2 ATP are created END Chloroplasts Make Photosynthesis Possible Any green part of a plant possesses chloroplasts which contain a green photopigment: chlorophyll Chloroplasts are found mainly in the mesophyll cells in the interior of the plant’s leaves O 2 exits and CO2 enters through pores called stomata on the leaf ’s surface Chloroplasts are doublemembrane organelles around a central space: stroma In the stroma are membranous sacs called thylakoids Internal space called thylakoid space Stacked into grana The Basics of Photosynthesis The general reaction of photosynthesis: SUN 6CO2 + 12H2O C6H12O6 + 6H2O + 6O2 Basically, carbon is extracted from carbon dioxide to make sugar, while oxygen is released into the atmosphere The Light Reactions & The Calvin Cycle Photosynthesis is a two step process Light reactions Converts solar energy into chemical energy Calvin cycle Incorporates CO2 into organic molecules and uses chemical energy from light reactions to create sugar The light reactions – an overview Water is split, hydrogen and electrons used to reduce NADP+ to NADPH (an electron carrier) ATP is generated by photophosphorylation The Calvin cycle – an overview CO2 is incorporated into what will become sugar during carbon fixation NADPH and ATP are used to create the new organic molecule The light reactions & Calvin cycle: The Photopigments of Photosynthesis A number of pigments exist in plants, but only one, chlorophyll a, is directly involved in the photosynthetic reactions Accessory pigments can funnel light energy to chlorophyll a Chlorophyll b Carotenoids Xanthophylls Photons of light are absorbed by pigments in thylakoid membranes In the thylakoid membrane, a “light antenna” called a photosystem channels light energy Energy transferred from molecule to molecule until it reaches the reaction center chlorophyll a Photosystems Two types of photosystems work in the light reactions of photosynthesis Photosystem I & Photosystem II Photosystem I (P700) absorbs light best at 700nm (far red) Photosystem II (P680) absorbs light best at 680nm 1. An P680 isis hit by lightare and 2 electrons, 2. 3. Water Excited electrons split creating passed ½excites O2, which down an is joined E.T.C. 4. electron acceptor in P700 captures the + sending itand to the electron acceptor with (which another creates ½ ATP) Oprimary to to form P700 O electrons uses them to reduce NADP 2 2 Electron flow takes electrons from water, and uses them to reduce NADP+ ATP created on the way through E.T.C. O2 is a byproduct of splitting water ATP Synthesis Chloroplasts and mitochondria both create ATP using chemiosmosis Chloroplasts transform light energy into chemical energy The Calvin Cycle The Calvin cycle uses ATP and NADPH to create sugar Not actually “glucose,” but glyceraldehyde-3phosphate (G3P), a 3-Carbon sugar Each turn through the Calvin cycle fixes one carbon There are three phases to the Calvin cycle Carbon fixation, Reduction, Regeneration of the CO2 acceptor ATP isG3P used to add another phosphate group Net new cost per G3P 9 3modified ATP + 6into NADPH + 3 to COby Some sugars are by 3the ATP NADPH isattached used to= remove one ofsugars phosphates 3CO to 5-Carbon (RuBP) The sugars split 6,more 3-carbon 2 2 are6-Carbon EACH of to the 3-Carbon sugars molecules regenerate from each sugar, creatingRuBP a G3P sugar rubisco sugars The Calvin Cycle: CARBON FIXATION ADP P P C C C ATP P C C C C C P P C C C P ATPRuBP ADP P C C C ATP P ADP P C C C C C P RuBP ATPP C C C P ADP rubisco O C O O C O rubisco rubisco O C O ATP P C C C P ADP P C C C C C P P C C C P ATP RuBP ADP The Calvin Cycle: REDUCTION G3P G3P P C NADP+ C C P G3P G3P P C NADP+ C C P P C NADP+ C C P G3P P C NADP+ C C P EXITS CYCLE P C NADP+ C C P G3P P C NADP+ C C P NADPH NADPH NADPH NADPH NADPH NADPH The Calvin Cycle: REGENERATION OF THE CO2 ACCEPTOR (RuBP) ADP P P C C C C C P ADP P C C C P C C C P C C C C C P ADP P C C C C C P P C C C P C C C P C C C 15 Carbons 5 Phosphates P Two G3P molecules will be combined to form one glucose molecule. G3P P C C C 15 Carbons 6 Phosphates 3 RuBP molecules The Need for Alternative Methods of Carbon Fixation The Calvin cycle is not the only way plants fix carbon Dehydration is a huge problem for plants since water can evaporate through the stomata Hot dry days plants close stomata Most plants, called C3 plants, fix CO2 to RuBP using rubisco On hot, dry days, C3 plants close their stomata CO2 levels drop as it’s used in the Calvin cycle O2 levels rise as it cannot escape the leaf Rubisco will then fix O2 to RuBP, which then degrades and produces no G3P This process is called photorespiration and can severely affect the productivity of photosynthesis in a plant Avoiding Photorespiration A number of plants, called C4 plants, will first fix CO2 to a 4-carbon compound (organic acid) PEP carboxylase has a high affinity for CO2 and is much more efficient than rubisco 4-carbon compound moved to bundle sheath cells where the Calvin cycle can take place C4 plants are usually found in very hot regions with intense sunlight A second strategy for avoiding photorespiration can be found in CAM plants Cacti, pineapples, succulents CAM plants close their stomata during the day, and open them at night Night: plants fix CO2 into organic acids in the mesophyll cells Day: CO2 released from organic acids and light reactions create ATP and NADPH In C4 plants, carbon fixation and the Calvin cycle are spatially separated In CAM plants, carbon fixation and the Calvin cycle are temporally separated END Stages of Signal Transduction • The three stages of signal transduction are: • Reception, transduction, response • Cells can communicate with other cells they are physically connected to • Across great distances using hormones • Target cell is intended recipient for signal Reception • A Chemical signal called a ligand binds to protein in the target cell’s membrane • Protein changes conformation • Change in conformation sets in motion a series of other changes inside the cell Transduction • Transduction relays signals from reception to cellular responses • At each step, the signal is transduced in a different form • Usually a protein changing its comformation • Kinases are a common group of intracellular proteins Cellular Response • Response can include activities within the cell or stimulate transcription in the nucleus • Can increase or decrease metabolism within a cell • Protein synthesis may be induced to create proteins needed • Certain pathways help to amplify responses • Various cells may receive the same signal, but have different responses • Ex. adrenalin in heart muscle cells triggers rapid heartbeat; adrenalin in liver cells triggers release of glucose into the blood END