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Principles of BIOCHEMISTRY Third Edition HORTON MORAN Prentice Hall c2002 OCHS Chapter 8 RAWN SCRIMGEOUR 1 Chapter 8 - Carbohydrates • Carbohydrates (“hydrate of carbon”) have empirical formulas of (CH2O)n , where n ≥ 3 • Monosaccharides one monomeric unit • Oligosaccharides ~2-20 monosaccharides • Polysaccharides > 20 monosaccharides • Glycoconjugates linked to proteins or lipids Prentice Hall c2002 Chapter 8 2 8.1 Most Monosaccharides are Chiral Compounds • Aldoses - polyhydroxy aldehydes • Ketoses - polyhydroxy ketones • Most oxidized carbon: aldoses C-1, ketoses usually C-2 • Trioses (3 carbon sugars) are the smallest monsaccharides Prentice Hall c2002 Chapter 8 3 Aldoses and ketoses • Aldehyde C-1 is drawn at the top of a Fischer projection • Glyceraldehyde (aldotriose) is chiral (C-2 carbon has 4 different groups attached to it) • Dihydroxyacetone (ketotriose) does not have an asymmetric or chiral carbon and is not a chiral compound Prentice Hall c2002 Chapter 8 4 Fig 8.1 Fischer projections of: (a) L- and Dglyceraldehyde, (b) dihydroxyacetone Prentice Hall c2002 Chapter 8 5 Fig 8.2 Stereo view of L- and D-glyceraldehyde (L) Prentice Hall c2002 (D) Chapter 8 6 Fig 8.3 Fisher projections of 3 to 6 carbon D-aldoses • D-sugars have the same configuration as D-glyceraldehyde in their chiral carbon most distant from the carbonyl carbon • Aldoses shown in blue (next slide) are most important in biochemistry Prentice Hall c2002 Chapter 8 7 Fig. 8.3 Prentice Hall c2002 Chapter 8 8 Fig. 8.3 (continued) Prentice Hall c2002 Chapter 8 9 Fig 8.3 (continued) Prentice Hall c2002 Chapter 8 10 Enantiomers and epimers • D-Sugars predominate in nature • Enantiomers - pairs of D-sugars and L-sugars • Epimers - sugars that differ at only one of several chiral centers • Example: D-galactose is an epimer of D-glucose at C-4 Prentice Hall c2002 Chapter 8 11 Fig 8.4 Fisher projections of L- and D-glucose Prentice Hall c2002 Chapter 8 12 Fig 8.5 Fisher projections of the 3 to 6 carbon D-ketoses (blue structures are most common) Prentice Hall c2002 Chapter 8 13 Fig. 8.5 (continued) Prentice Hall c2002 Chapter 8 14 Fig 8.5 (continued) Prentice Hall c2002 Chapter 8 15 8.2 Cyclization of Aldoses and Ketoses Fig. 8.6 Reaction of an alcohol with: (a) An aldehyde to form a hemiacetal (b) A ketone to form a hemiketal Prentice Hall c2002 Chapter 8 16 Fig 8.7 (a) Pyran and (b) furan ring systems • (a) Six-membered sugar ring is a “pyranose” • (b) Five-membered sugar ring is a “furanose” Prentice Hall c2002 Chapter 8 17 Fig 8.8 Cyclization of D-glucose to form glycopyranose • Fischer projection (top left) • Threedimensional figure (top right) • C-5 hydroxyl close to aldehylde group (lower left) Prentice Hall c2002 Chapter 8 18 Fig. 8.8 (continued) • Reaction of C-5 hydroxyl with one side of C-1 gives a, reaction with the other side gives b Prentice Hall c2002 Chapter 8 19 Fig 8.9 Cyclization of D-ribose to form a- and b-D-ribopyranose and a- and b-D-ribofuranose Continued on next slide Prentice Hall c2002 Chapter 8 20 Fig. 8.9 (continued) Continued next slide Prentice Hall c2002 Chapter 8 21 Fig 8.9 (continued) Prentice Hall c2002 Chapter 8 22 8.3 Conformations of Monosaccharides Fig. 8.10 Conformations of b-D-ribofuranose Prentice Hall c2002 Chapter 8 23 Fig 8.11 Conformations of b-D-glucopyranose Haworth projection Chair conformation Boat conformation (b) Stereo view of chair (left), boat (right) Prentice Hall c2002 Chapter 8 24 Fig 8.12 Conformations of b-D-glucopyranose • Top conformer is more stable because it has the bulky hydroxyl substituents in equatorial positions (less steric strain) Prentice Hall c2002 Chapter 8 25 8.4 Derivatives of Monosaccharides • Many sugar derivatives are found in biological systems • Some are part of monosaccharides, oligosaccharides or polysaccharides • These include sugar phosphates, deoxy and amino sugars, sugar alcohols and acids Prentice Hall c2002 Chapter 8 26 Table 8.1 Prentice Hall c2002 Chapter 8 27 A. Sugar Phosphates Fig 8.13 Some important sugar phosphates Prentice Hall c2002 Chapter 8 28 B. Deoxy Sugars • In deoxy sugars an H replaces an OH Fig 8.14 Deoxy sugars Prentice Hall c2002 Chapter 8 29 C. Amino Sugars • An amino group replaces a monosaccharide OH • Amino group is sometimes acetylated • Amino sugars of glucose and galactose occur commonly in glycoconjugates Prentice Hall c2002 Chapter 8 30 Fig 8.15 Several amino sugars • Amino and acetylamino groups are shown in red Prentice Hall c2002 Chapter 8 31 Fig. 8.15 (continued) Prentice Hall c2002 Chapter 8 32 D. Sugar Alcohols (polyhydroxy alcohols) • Sugar alcohols: carbonyl oxygen is reduced Fig 8.16 Several sugar alcohols Prentice Hall c2002 Chapter 8 33 E. Sugar Acids • Sugar acids are carboxylic acids • Produced from aldoses by: (1) Oxidation of C-1 to yield an aldonic acid (2) Oxidation of the highest-numbered carbon to an alduronic acid Prentice Hall c2002 Chapter 8 34 Fig 8.17 Sugar acids derived from glucose Prentice Hall c2002 Chapter 8 35 Fig. 8.17 (continued) Prentice Hall c2002 Chapter 8 36 F. Ascorbic Acid (Vitamin C) • L-Ascorbic acid is derived from D-glucuronate Fig 8.18 L-Ascorbic acid Prentice Hall c2002 Chapter 8 37 8.5 Disaccharides and Other Glycosides • Glycosidic bond - primary structural linkage in all polymers of monosaccharides • An acetal linkage - the anomeric sugar carbon is condensed with an alcohol, amine or thiol • Glucosides - glucose provides the anomeric carbon Prentice Hall c2002 Chapter 8 38 Fig 8.19 Glucopyranose + methanol yields a glycoside Prentice Hall c2002 Chapter 8 39 A. Structures of Disaccharides Fig 8.20 Structures of (a) maltose, (b) cellobiose Prentice Hall c2002 Chapter 8 40 Fig. 8.20 (continued) Structures of (c) lactose, (d) sucrose Prentice Hall c2002 Chapter 8 41 B. Reducing and Nonreducing Sugars • Monosaccharides and most disaccharides are hemiacetals (contain a reactive carbonyl group) • Called reducing sugars because they can reduce metal ions (Cu2+, Ag+) • Examples: glucose, maltose, cellobiose, lactose Prentice Hall c2002 Chapter 8 42 C. Nucleosides and Other Glycosides • Anomeric carbons of sugars can form glycosidic linkages with alcohols, amines and thiols • Aglycones are the groups attached to the anomeric sugar carbon • N-Glycosides - nucleosides attached via a ring nitrogen in a glycosidic linkage Prentice Hall c2002 Chapter 8 43 Fig 8.21 Structures of three glycosides Prentice Hall c2002 Chapter 8 44 8.6 Polysaccharides • Homoglycans - homopolysaccharides containing only one type of monosaccharide • Heteroglycans - heteropolysaccharides containing residues of more than one type of monosaccharide • Lengths and compositions of a polysaccharide may vary within a population of these molecules Prentice Hall c2002 Chapter 8 45 Prentice Hall c2002 Chapter 8 46 A. Starch and Glycogen • D-Glucose is stored intracellularly in polymeric forms • Plants and fungi - starch • Animals - glycogen • Starch is a mixture of amylose (unbranched) and amylopectin (branched) Prentice Hall c2002 Chapter 8 47 Fig 8.22 Structure of amylose (a) Amylose is a linear polymer (b) Assumes a left-handed helical conformation in water Prentice Hall c2002 Chapter 8 48 Fig 8.23 Structure of amylopectin Prentice Hall c2002 Chapter 8 49 Fig 8.24 Action of a- and b-amylase on amylopectin • a-Amylase cleaves random internal a-(1-4) glucosidic bonds • b-Amylase acts on nonreducing ends Prentice Hall c2002 Chapter 8 50 B. Cellulose and Chitin Fig 8.25 Structure of cellulose (a) Chair conformation (b) Haworth projection Prentice Hall c2002 Chapter 8 51 Fig 8.26 Stereo view of cellulose fibrils • Intra- and interchain H-bonding gives strength Prentice Hall c2002 Chapter 8 52 Fig 8.27 Structure of chitin • Repeating units of b-(1-4)GlcNAc residues Prentice Hall c2002 Chapter 8 53 8.7 Glycoconjugates • Heteroglycans appear in three types of glycoconjugates: Proteoglycans Peptidoglycans Glycoproteins Prentice Hall c2002 Chapter 8 54 A. Proteoglycans • Proteoglycans - glycosaminoglycan-protein complexes • Glycosaminoglycans - unbranched heteroglycans of repeating disaccharides (many sulfated hydroxyl and amino groups) • Disaccharide components include: (1) amino sugar (D-galactosamine or D-glucosamine), (2) an alduronic acid Prentice Hall c2002 Chapter 8 55 Fig 8.28 Repeating disaccharide of hyaluronic acid • GlcUA = D-glucuronate • GlcNAc= N-acetylglucosamine Prentice Hall c2002 Chapter 8 56 Fig 8.29 Proteoglycan aggregate of cartilage Prentice Hall c2002 Chapter 8 57 B. Peptidoglycans • Peptidoglycans - heteroglycan chains linked to peptides • Major component of bacterial cell walls • Heteroglycan composed of alternating GlcNAc and N-acetylmuramic acid (MurNAc) • b-(1 4) linkages connect the units Prentice Hall c2002 Chapter 8 58 Fig 8.30 Glycan moiety of peptidoglycan Prentice Hall c2002 Chapter 8 59 Fig 8.31 Structure of the peptidoglycan of S. aureus (a) Repeating disaccharide unit, (b) Cross-linking of the peptidoglycan macromolecule (to tetrapeptide, next slide) Prentice Hall c2002 Chapter 8 60 Fig. 8.31 (continued) (to disaccharide, previous slide) Prentice Hall c2002 Chapter 8 61 Penicillin inhibits a transpeptidase involved in bacterial cell wall formation • Fig 8.32 Structures of penicillin and -D-Ala-D-Ala • Penicillin structure resembling -D-AlaD-Ala is shown in red Prentice Hall c2002 Chapter 8 62 C. Glycoproteins • Proteins that contain covalently-bound oligosaccharides • O-Glycosidic and N-glycosidic linkages • Oligosaccharide chains exhibit great variability in sugar sequence and composition • Glycoforms - proteins with identical amino acid sequences but different oligosaccharide chain composition Prentice Hall c2002 Chapter 8 63 Four subclasses of O-glycosidic linkages (1) GalNAc-Ser/Thr (most common) (2) 5-Hydroxylysine (Hyl) to D-galactose (unique to collagen) (3) Gal-Gal-Xyl-Ser-core protein (4) GlcNAc to a single serine or threonine Prentice Hall c2002 Chapter 8 64 Fig. 8.33 O-Glycosidic and N-glycosidic linkages Prentice Hall c2002 Chapter 8 65 Fig 8.34 Four subclasses of O-glycosidic linkages Prentice Hall c2002 Chapter 8 66 Fig 8.35 Structures of N-linked oligosaccharides Prentice Hall c2002 Chapter 8 67 Fig. 8.35 (continued) Prentice Hall c2002 Chapter 8 68