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Table S14
Expression of genes positively regulated by FGF signalling
Gene
Affymetrix
probe set
Expression at early
gastrula stage
Brachyury
Egr1
FoxD5A
SIP1
Cdx4
Esr5
Purine phosphorylase
Marginal coil
Paraxial protocadherin
Glycogen phosphorylase
NADH dehydrogenase sub-unit
Xl.514.1.S1_at
Xl.637.1.A1_at
Xl.642.1.S1_at
Xl.958.1.S2_at
Xl.10269.1.S1_at
Xl.14524.1.S1_at
Xl.16206.1.A1_at
Xl.5454.1.S1_at
Xl.6173.1.A1_at
Xl.7815.1.A1_at
Xl.12993.1.A1_at
See Figure 1H
Mesoderm with dorsal enrichment*
See Figure 4B
Dorsal neuroectoderm*
See Figure 1H
See Figure 2F
See Figure 2F
Mesoderm with dorsal enrichment*
Mesoderm with dorsal enrichment*
See Figure 2F
FoxD3A
G-coupled receptor P2Y5
Xl.525.1.S1_at
Xl.19933.1.S1_at
Dorsal mesoderm*
Related to DC-STAMP domain receptor
Xl.15270.1.A1_at
Meso05
Xl.7720.1.A1_at
Gene
Affymetrix
probe set
Expression at early
gastrula stage
Uncharacterised protein C2orf32
Xl.25136.1.A1_at
Frzb1
XPO
Ephrin receptor A4
XSpr2
Xl.212.2.S1_a_at
Xl.5908.1.S1_s_at
Xl.13.2.A1_at
Xl.2755.1.S1_a_at
See Figure 4B
Mesoderm*
See Figure 2F
Zic3a
Xl.7969.1.S1_at
Xiro3
Gravin-like
Xl.4522.1.S1_at
Xl.3468.1.S1_at
Dorsal mesoderm and
neuroectoderm*
Dorsal neuroectoderm*
Alkaline phosphatase
Apobec2
p75-like fullback receptor
Wnt8
Fructokinase-related protein
Crescent
Pinhead
Wnt5b
Unknown
Retrotransposon protein 1a11
FoxA4
Mitotic phosphoprotein 67
Cdx1
Xl.1299.1.S1_at
Xl.5876.1.A1_a
Xl.3540.1.S1_at
Xl.49.1.S1_at
Xl.15623.1.A1_at
Xl.619.1.S1_at
Xl.3529.1.A1_at
Xl.11619.1.S1_at
Xl.5479.1.A1_at
Xl.3352.1.S1_at
Xl.1082.1.S1_at
Xl.20772.1.A1_at
Xl.23739.1.A1_at
Sprouty2
DUSP5
Chordin
MKP1
Unknown
Xom
Xl.11965.1.S1_at
Xl.15374.1.A1_at
Xl.3549.1.S1_at
Xl.2803.1.S1_at
Xl.18179.1.S1_at
Xl.37.1.S1_at
Unknown**
See Figure 2F
Mesoderm*
Ventro-lateral mesoderm*
Unknown**
Dorsal mesoderm*
Mesoderm*
Unknown**
See Figure 2F
Mesoderm*
Dorsal mesoderm*
Unknown**
Mesoderm with ventro-lateral
enrichment*
Mesoderm*
See Figure 2F
Dorsal mesoderm*
See Figure 2F
Unknown**
Mesoderm with ventro-lateral
enrichment*
Gene
Affymetrix
probe set
Putative nucleolar GTP binding protein
Xl.14776.1.A1_at
Lin28a homologue
Xl.3418.1.A1_at
Glut1 transporter
Unknown
Dkk1
Unknown
RALDH2
Prickle
ADMP
Unknown
Cytochrome B561
Goosecoid
FoxC1
Noggin
Sprouty1
Oct1
Rexp52
Grb10 interacting protein2
Putative methyltransferase
Connexin 29
SMCT
Weakly similar to Rab1
Unknown
Moderately similar to Brain protein 44
Ephrin receptor A2
Xl.24121.1.A1_at
Xl.15382.1.A1_at
Xl.251.1.S1_at
Xl.11594.1.A1_at
Xl.18999.1.A1_at
Xl.7556.1.S1_at
Xl.3809.1.A1_at
Xl.1521.1.A1_at
Xl.11917.1.S1_at
Xl.801.1.S1_at
Xl.180.1.S1_at
Xl.834.1.S1_at
Xl.10087.1.A1_Fat
Xl.1265.1.S1_at
Xl.3023.1.A1_at
Xl.14208.1.A1_at
Xl.20056.1.S1_a_at
Xl.8924.1.A1_at
Xl.6392.1.A1_at
Xl.3365.1.A1_at
Xl.19961.1.S1_at
Xl.15887.1.S1_x_at
Xl.14496.1.A1_at
*=Based upon published expression data.
**=Expression pattern not investigated.
Expression at early
gastrula stage
Mesoderm with dorsal enrichment*
Unknown**
Dorsal mesoderm*
Unknown**
Mesoderm with dorsal enrichment*
Mesoderm with dorsal enrichment*
Dorsal mesoderm*
Unknown**
Unknown**
Dorsal mesoderm*
Mesoderm with dorsal exclusion*
Dorsal mesoderm*
Mesoderm*
Ectoderm and mesoderm*
General
Unknown**
See Figure 2F
Unknown**
Unknown**
Unknown**
Unknown**
Unknown**
Unknown**
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