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Table S3. Differentially upregulated genes in LS-matrigel compared to BM-MSC.
Gene Symbol
Gene Name
Genbank Accession
FC([LS-matrigel] vs [BM-MSC])
WNT2
wingless-type MMTV integration site family member 2
NM_003391
116.163155
WISP2
WNT1 inducible signaling pathway protein 2
NM_003881
103.98407
RCAN2
regulator of calcineurin 2
NM_005822
91.014725
IRX1
iroquois homeobox 1
NM_024337
65.25024
IGFBP2
insulin-like growth factor binding protein 2, 36kDa
NM_000597
60.87173
IGFBP5
insulin-like growth factor binding protein 5
NM_000599
57.479874
CPZ
carboxypeptidase Z
NM_001014448
51.587616
RAMP1
receptor (G protein-coupled) activity modifying protein 1
NM_005855
49.492893
AQP1
aquaporin 1 (Colton blood group)
NM_198098
47.68956
CMKLR1
chemokine-like receptor 1
NM_001142343
47.164062
GAS1
growth arrest-specific 1
NM_002048
44.514366
RGS16
regulator of G-protein signaling 16
NM_002928
44.092167
FBN2
fibrillin 2
NM_001999
43.543026
PCSK9
proprotein convertase subtilisin/kexin type 9
NM_174936
39.846733
IGDCC4
immunoglobulin superfamily, DCC subclass, member 4
NM_020962
38.72163
OSR2
odd-skipped related 2 (Drosophila)
NM_053001
34.215805
FBLN1
fibulin 1
NM_001996
33.81331
TMEM130
transmembrane protein 130
NM_152913
33.61986
SEMA3B
sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B
NM_004636
33.126236
FBLN1
fibulin 1
NM_001996
30.188076
hCG_1994695
similar to hCG1994695
NR_026913
29.96652
JAM2
junctional adhesion molecule 2
NM_021219
29.720497
ARHGAP28
Rho GTPase activating protein 28
NM_001010000
26.640345
EXPH5
exophilin 5
NM_015065
26.30286
FMOD
fibromodulin
NM_002023
26.207024
PITX2
paired-like homeodomain 2
NM_153426
23.72219
FBLN1
fibulin 1
NM_006486
23.1944
ADM
adrenomedullin
NM_001124
22.93511
SULF2
sulfatase 2
NM_018837
22.92587
CRABP2
cellular retinoic acid binding protein 2
NM_001878
22.573261
C10orf10
chromosome 10 open reading frame 10
NM_007021
22.004457
IL17RD
interleukin 17 receptor D
NM_017563
21.870169
OGN
osteoglycin
NM_033014
21.806427
CUGBP2
CUG triplet repeat, RNA binding protein 2
NM_001025077
19.699055
SLIT3
slit homolog 3 (Drosophila)
NM_003062
19.293352
COL14A1
collagen, type XIV, alpha 1
NM_021110
18.272284
ADAM33
ADAM metallopeptidase domain 33
NM_025220
17.959604
FAM174B
family with sequence similarity 174, member B
NM_207446
17.270542
CYP27A1
cytochrome P450, family 27, subfamily A, polypeptide 1
NM_000784
16.833443
MAP2K6
mitogen-activated protein kinase kinase 6
NM_002758
16.517181
CYB5R2
cytochrome b5 reductase 2
NM_016229
16.309109
MSX2P1
msh homeobox 2 pseudogene 1
NR_002307
16.186678
CLDN23
claudin 23
NM_194284
15.727608
CYB5R2
cytochrome b5 reductase 2
NM_016229
15.632573
IRX2
iroquois homeobox 2
NM_033267
15.422464
FAM46C
family with sequence similarity 46, member C
NM_017709
15.37971
CUGBP2
CUG triplet repeat, RNA binding protein 2
NM_001025076
14.707707
ASS1
argininosuccinate synthetase 1
NM_000050
14.5275755
SGCD
sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
NM_000337
14.356614
CAND2
cullin-associated and neddylation-dissociated 2 (putative)
NM_012298
14.288822
GPNMB
glycoprotein (transmembrane) nmb
NM_001005340
14.0712185
ASS1
argininosuccinate synthetase 1
NM_000050
13.892227
IRX2
iroquois homeobox 2
NM_033267
13.4494095
CDON
Cdon homolog (mouse)
NM_016952
12.851442
TMEM119
transmembrane protein 119
NM_181724
12.299345
PDK4
pyruvate dehydrogenase kinase, isozyme 4
NM_002612
12.107496
ADAMTSL4
ADAMTS-like 4
NM_019032
11.8018
COLEC12
collectin sub-family member 12
NM_130386
11.321659
NOVA1
neuro-oncological ventral antigen 1
NM_002515
11.0360365
PCDH18
protocadherin 18
NM_019035
10.957617
CNTN3
contactin 3 (plasmacytoma associated)
NM_020872
10.944424
MTMR9L
myotubularin related protein 9-like
NR_026850
10.895938
C1R
complement component 1, r subcomponent
NM_001733
10.602338
DPP4
dipeptidyl-peptidase 4
NM_001935
10.319492
DIRC3
disrupted in renal carcinoma 3
NR_026597
10.124143