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10.1.1.1 Molecules for life Basic nutrients (elements and compounds) for life: Introduction Copyright © R. Botha (2011) Introduction • Living organisms consist of elements and compounds that are part of the natural elements of the earth. • About 22 of the 92 natural elements are essential for life. • Plants and animals have basically the same consistence although they differ considerably from one another. They comprise of the same compounds namely proteins, carbohydrates, lipids and nucleic acids. (Introduction) Most living organisms are comprised of the following elements: • hydrogen (H): ± 60%, • oxygen (O): ± 25%, • carbon (C): ± 10%, • nitrogen (N): ± 2%, • sodium (Na) ± 0.7%, en • very small quantities of sulphur (S), phosphorus (P), magnesium (Mg), chlorine (Cl), iron (Fe), etc. What is the source of all the different elements and compounds that living organisms need? Nutrients • Nutrients are all the different material (organic and inorganic: we will look at the meaning of these words a bit later) that is essential to maintain the life of organisms. • Animals do not make their own nutrients, but get their nutrients from other sources (the food that they eat). • Plants make their own organic nutrients and get their inorganic nutrients from the soil by taking it up through their roots. • Chemical reactions are constantly taking place in living cells and the chemical material participating in these reactions are found in and around the cells. • Nutrients are the source of these chemical material. What do you think are the functions of nutrients in the body? Quickly discuss it with one another. Functions of nutrients Elements and compounds has the following functions as nutrients in living cells: • Some elements are building material (structural components) for important organic molecules of which the organism comprises. • Certain compounds and elements are a source of energy for the processes of life. • The ions of some elements have an electrical charge that influences the colloidal properties of the cytoplasm, eg. the potential to take up water and other materials. • Co-enzymes, in the form of single ions, have an influence on the activity of enzymes, vitamins and hormones. Classification of nutrients Nutrients Organic • Carbohydrates • Fats and Lipids • Proteins • Enzymes • Vitamins • Hormones • Nucleic acids Inorganic Mineral elements Macro elements Micro elements For all organisms: K, Ca, Mg, P, S For all organisms: Fe, Mn, Zn, Cu, Co For animals: Na, Cl. For animals: I, Cr For plants: Mo, B, Cl, Na, Ni Other • Water • Carbon dioxide • Nitrogen containing compounds • Oxygen Inorganic nutrients • Inorganic material are traditionally seen as material derived from mineral sources with no biologic origin. • We will look at the following inorganic material: – mineral elements – water (H2O) – carbon dioxide (CO2) Inorganic nutrients: Mineral elements • The original meaning of minerals is material that naturally occurs in the earth’s crust and is exploited by mining. • True minerals are crystalline solids. • Nutrient mineral elements are those mineral elements required by living organisms except the four elements commonly found in all living organisms namely carbon (C), hydrogen (H), nitrogen (N) en oxygen (O). Macronutrient mineral elements • Some mineral elements are required in large quantities by living organisms (> 200 mg/day). • These elements are called macronutrient elements and are mainly required as building material for compounds such as: – – – – – carbohydrates, proteins, nucleic acids, hormones, chlorophyll in plants, etc. Micronutrient mineral elements • Often only very small quantities of certain mineral elements are required (< 200 mg/day). • These mineral elements are called micro mineral elements, or simply trace elements. • Trace elements are used in molecules of certain enzymes, vitamins and hormones. Think about mineral uptake in plants and animals. What do you think is the mechanism of uptake? Mineral uptake • Mineral uptake in plants is mainly via the roots after which the mineral elements are transported to the cells by the vascular tissue of the plant. • Animals get minerals from the food and fluids that they eat and drink. The food is then digested and broken down into simple compounds and elements. Biological importance of minerals • The biological importance of mineral elements includes the following: – They are basic components of organic molecules. – They have an influence on the colloidal state of the cytoplasm. – They have an influence on the activity of enzymes. – They have an influence on the pH of the protoplasm. • Mineral deficiencies cause specific deficiency symptoms in plants and animals. Let’s look at the functions of minerals in plants and animals and some of the deficiency symptoms. The information in the following tables is only to let you know how important nutrition and nutrients are. You do NOT have to remember it for tests and exams! Minerals: functions in plants and animals Minerals Functions and deficiency symptoms Sodium (Na+ ions) Animals: Macroelement; one of the main cations in extracellular fluid; essential for the co-regulation of ATP with potassium; serves as conductor of electrical impulses in muscles and nerves. Deficiency symptoms: cellular dehydration and abnormal blood pressure. Plants: Trace element; serves as partial substitute for potassium. Bluegreen bacteria require sodium for normal growth and development. Chlorine (Cl– ions) Animals: Macroelement; main anion in extracellular fluid; part of the hydrochloric acid molecule in the digestive system of some animals (including humans); electrical activity of cells controlled by Cl– ions (cellular pump actions). Deficiency symptoms: Pleural inflammation (pleurisy). Plants: Trace element; necessary for the oxidation of H2O during photosynthesis. (Minerals: functions in plants and animals) Minerals Functions and deficiency symptoms Magnesium (Mg++ ions) Animals: Macroelement; important in cell membrane stability, nerve functions and muscle contractions and in the processing of ATP; component of bones. Deficiency symptoms: abnormal hart rhythm and tetany (intense, involuntary contraction of muscles). Plants: Macroelement; necessary for carbohydrate metabolism and the synthesis of chlorophyll; important component of the middle lamella of cell walls and of certain co-enzymes. Deficiency symptoms: chlorosis (yellowing of leaves). Calsium (Ca++ ions) Animals: Macroelement; necessary for the control of cell membrane stability, translocation of nerve impulses; muscle tone, healthy heart, digestion and the clogging of blood; important component of the sceleton. Deficiency symptoms: tetany and abnormal muscle cramps. Plants: Macroelement; part of the pectin molecule and therefore important for the middle lamella of cell walls; influences the selective permeability of cell membranes and the hydration of protoplasm. Deficiency symptoms: death of the growing tips. Calsium is absent in some algae and fungi. (Minerals: functions in plants and animals) Minerals Functions and deficiency symptoms Potassium (K+ ions) Animals: Macroelement; main cation in extracellular fluid; systemic electrolyte; essential for the co-regulation of ATP with sodium; coconductor of impulses in muscles and nerves. Deficiency symptoms: muscle weakness and cramps; high blood pressure; arrhythmia; tetany. Overdose: dehydration and kidney failure; arrhythmia; muscle weakness. Plants: Macroelement; control osmotic potential of cells, selective permeability of cell membranes and assimilation (uptake) of CO2 during photosynthesis. Iron (Fe++ of Fe+++ ions) Animals: Macroelement; essential for proteins and enzymes; integral part of the haemaglobin and cytochrome molecule which is essential for the assimilation and transport of oxygen in the body. Deficiency symptoms: anaemia. Plants: Trace element; component of respiratory enzymes; present in the stroma of the chloroplast; essential co-enzyme during the synthesis of chlorophyll. Deficiency symptoms: chlorosis; short and thin twigs. (Minerals: functions in plants and animals) Minerals Functions and deficiency symptoms Nitrogen (NO3 – ions or NH4+ ions) Animals: Macroelement; component of important molecules such as amino acids and nucleic acids. Plants: Macroelement; starting point of protein metabolism; component of amino acids, nucleic acids, chlorophyll, etc. Deficiency symptoms: pale green leaves; retarded growth. Overdose: dark green leaves; large number of leaves; underdeveloped root system; inhibition of flowering. Phosphorus (PO43– ions) Animals and plants: Macroelement; component of nucleotides and nucleic acids; part of the prosthetic groups of many enzymes; the phosphorus bonds in many organic molecules are carriers of energy in respiratory metabolism; essential component of cell membranes and bones; functional in the regulation of the pH of body fluids in animals. Deficiency symptoms in plants: stems and leaves turn red or purple. (Minerals: functions in plants and animals) Minerals Functions and deficiency symptoms Sulphur (SO42– ions) Animals and plants: Macroelement; sulphur ions are essential for the synthesis of certain important amino acids and proteins; sulphur is also a component of vitamin B1 and biotin. Deficiency symptoms in plants: young leaves are pale green. Zinc (Zn++ ions) Animals and plants: Trace element; component of many enzymes involved in cell metabolism. Plants: Component of growth hormones and the co-enzymes involved in photosynthesis. Deficiency symptoms: dots on stems; short nodes. Iodine (I– ions) Animals: Trace element; part of the thyroxine molecule which controls important metabolic cellular functions. Deficiency symptoms: enlarged thyroid gland (goiter). Manganese (Mn++ ions) Animals and plants: Trace element; necessary for nitrogen reduction; cofactor in the functioning of certain enzymes; co-enzyme in cellular respiration reactions. (Minerals: functions in plants and animals) Minerals Functions and deficiency symptoms Borium (B) Plants: Some plants require borium as a trace element; influences the development of meristematic tissue; plays an important role in the development of the pollen tube and the translocation of sugar. Deficiency symptoms: causes heart rot in sugar beet and other similar crops. Molibdenium Trace element for some bacteria where it is essential for the fixation of (Mo) atmospheric nitrogen and the assimilation of nitrate and is a component of several enzymes. Cobalt (Co++ ions) A component of vitamin B12 and trace amounts are found in blue green bacteria. (Minerals: functions in plants and animals) Minerals Functions and deficiency symptoms Copper (C++ en C+++ ions) Animals and plants: Trace element; essential component of several redox enzymes; a component of haemocyanis in some animals; an oxidation catalyst for several mitochondric reactions in plants and animals; essential for photosynthesis in plants. Deficiency symptoms in plants: wilting of young leaves and a low crop yield. Chromium (Cr+++ ions) Essential trace element for normal sugar and fat metabolism because chromium enhances the activity of insulin; present in the entire body with the highest concentrations in the liver, kidneys, spleen and bones. Deficiency symptoms: anxiety; fatigue, glucose intolerance, insufficient amino acid metabolism; higher risk for arteriosclerosis. Certain other trace elements are required in plants. Their functions probably include coenzymes in metabolic reactions and integral components of certain enzymes. These minerals include: aluminium, silicon, vanadium, fluorine and selenium. Bemesting van plante • Ons het in die vorige tabel gesien dat minerale elemente verskeie funksies in plante het, en daarom baie belangrike voedingstowwe is. • Grond is dikwels arm aan minerale en boere en tuiniers moet dan hierdie minerale aanvul deur bemestingstowwe (kunsmis). • Die bemesting van plante is baie kompleks en daarom is dit nodig dat boere ‘n goeie kennis van die samestelling van die grond asook die behoeftes van die oesgewasse het wat hulle verbou. Bemesting van plante: Stikstof (N) as voorbeeld • In die vorige tabel het ons gesien dat stikstof baie belangrik is vir plante, want dit is ‘n: – ‘n Makro-element en die beginpunt van proteïenmetabolisme; – ‘n komponent van aminosure, nukleïensure, chlorifl, ens. • Molekulêre stikstof (N2) kan egter nie direk deur plante opgeneem word nie. Die stikstof moet dus in ‘n ander vorm aan plante beskikbaar gestel word. Bemesting van plante: Stikstof (N) as voorbeeld • Ammonium (NH4+) en nitraat (NO3-) kan wel deur plante opgeneem word en is beide goeie bronne van stikstof vir plante. • Kunsmis soos KAN (Kalksteen ammoniumnitraat) word dikwels gebruik om stikstof in die grond aan te vul sodat plante beter groei. • Ons het ook in die boonste tabel gesien dat die tekortsimptome van stikstof vertraagde groei en vergeling van blare (chlorose) by plante is. Bemesting van plante: Stikstof (N) as voorbeeld • Kunsmis soos KAN word dus gebruik om vertraagde groei en vergeling van blare te behandel deur ‘n ekstra bron van stikstof aan plante beskikbaar te stel. Vergeling van blare a.g.v. stikstortekort Vertraagde groei by koring a.g.v. stikstoftekort Bemesting van plante: Stikstof (N) as voorbeeld • Die toediening van kunsmis het dikwels nadelige uitwerking vir die omgewing. • Oortollige kunsmis word weggewas (deur besproeiing en reën) en belang sodoende in riviere, damme en mere. • Te veel voedingstowwe in die water verooksaak die oormatige groei van mikro-organismes (bakterieë en alge) in die water. • Die oormatige groei van mikro-organismes verwyder suurstof uit die water en skei baie koolstofdioksied in die water uit. • Die waterdiere (visse, krappe, insekte, ens.) het dan te min suurstof om te oorleef en vrek. Die oormatige koolstofdioksied is ook giftig vir die waterdiere. • Die totale ekostelsel in die riviere en damme word sodoende versteur. • Hierdie verskynsel staan bekend as die verryking van water deur kunsmis, of eutrofikasie. Bemesting van plante: Stikstof (N) as voorbeeld • ‘n Beter manier om stikstof (en enige ander minerale voedingstof) aan plante toe te dien, is dus deur natuurlikebemestingstowwe soos kompos en beesmis. • Die kompos en beesmis bevat ook baie ammonial en nitraat asook ureum, aminosure en nukleotiede, wat alles goeie bronne van stikstof vir plante is. Water, koolstofdioksied, suurstof en stikstof is alles anorganiese verbindings en elemente wat ‘n baie belangrike rol in lewe speel. Kom ons kyk heel eerste na water. Anorganiese voedingstowwe: Water (H2O) Water is die grootste komponent van lewende organismes. • Water is ‘n integrale deel en die grootste komponent van alle vorms van lewe • Water is die verspreidingsmedium van die protoplasma. • Water tree op as oplosmiddel vir en as noodsaaklike reagens in metaboliese prosesse. (Water) • Water is sentraal in fotosintese en selrespirasie. • Water is sentraal in suur-basis neutraliteit en ensiemreaksies. • Water is ‘n hoofkomponent van die omgewing van alle lewende organismes, veral akwatiese organismes. (Water) Fisiese en chemiese eienskappe wat water geskik maak om lewe te onderhou: 1. Water is ‘n kleurlose, geurlose, smaaklose vloeistof met die allotropiese vorms van ys (vaste stof) en stoom (gas). 2. Die watermolekuul is effens polêr wat maak dat stowwe met ‘n lading (ione) in water kan oplos. 3. Waterstofbindings (kragte tussen watermolekules) is verantwoordelik vir die oppervlakspanning en kapillariteit van water. (Water) 4. Water het ‘n hoë – – – kookpunt smeltpunt spesifieke hitte van verdamping. 5. Dit verskil van die meeste ander vloeistowwe in dié opsig dat die soliede vorm nl. ys minder dig is as die vloeistofvorm. Ys dryf dus op water. 6. Water is ‘n swak geleier van hitte. 7. Suiwer water is neutraal met ‘n pH van 7. As ons die woord koolsuurgas of koolstofdioksied (CO2) hoor, dan sien ons ‘n klomp uitroeptekens en dink ons net aan een dink: AARDVERWARMING. Tog is lewe nie moontlik sonder koolstofdioksied nie. Hoekom? Anorganiese voedingstowwe: Koolstofdioksied (CO2) • Koolstofdioksied maak ongeveer 0,03% van die atmosfeer uit. • Hoë konsentrasies koolstofdioksied in die atmosfeer is toksies en selfs dodelik vir mense en die meeste diere. • Koolstofdioksied is die belangrikste anorganiese bron van koolstof en koolstof is die hoof boustof van molekules vir lewe. • Tydens fotosintese in groen plante word koolstofdioksied gebruik om komplekse organiese molekules soos koolhidrate, proteïene, lipiede, nukleïensure, ens. te vorm. (Koolstofdioksied) • Hierdie organiese molekules is noodsaaklike boublokke en bronne van energie vir alle vorms van lewe. • Tydens selrespirasie word hierdie komplekse verbindings afgebreek en water en koolstofdioksied word weer in die atmosfeer vrygestel. • Koolstofdioksied los maklik op in die klam oppervlakke van plantselle en word dus maklik deur plante direk uit die atmosfeer opgeneem. Anorganiese voedingstowwe: Suurstof (O2) • Suurstof beslaan ongeveer 25% van die atmosfeer. • Die meeste lewende organismes benodig suurstof tydens selrespirasie (aërobiese respirasie) om bruikbare energie uit voedingstowwe te verkry. • Beide plante en diere verkry suurstof direk uit die omgewing (atmosfeer of opgelos in water). (Suurstof) • Fotosinterende organismes (hoofsaaklik groen plante en alge) stel in die daglig voortdurend suurstof in die omgewing (atmosfeer of water) vry deur fotosintese. • Drie anorganiese verbindings wat suurstof bevat nl. water (H2O), koolstofdioksied (CO2) en molekulêre suurstof (O2) is deurentyd in sirkulasie tussen die eksterne omgewing en lewende organismes deur die prosesse van fotosintese, respirasie en transpirasie. Anorganiese voedingstowwe: Stikstofbevattende verbindings • Stikstofbevattende verbindings is basiese boublokke in lewende organismes. • Stikstof is 'n integrale deel van aminosure en nukleïensure. • Molekulêre stikstof in die atmosfeer kan nie direk deur plante of diere gebruik word nie, maar moet omgeskakel word in 'n ander vorm of “gefikseer” word voordat dit gebruik kan word. (Stikstofbevattende verbindings) • Reënwater besit dikwels groot hoeveelhede ammonium (NH4+) en nitraat (NO3-) wat 'n gevolg is van stikstofaksies deur weerlig. • Rhizobium is ‘n bakterie wat simbioties in wortels van sekere plante lewe en kan stikstof fikseer wat dan beskikbaar is vir die plante. • Herbivore (plantvreters) gebruik stikstofbevattende aminosure uit plante as oorsprong van alle stikstofhoudende verbindings en karnivore (vleisvreters) kry hulle stikstof hoofsaaklik uit die proteïene in die vleis wat hulle eet. Organiese voedingstowwe • Organiese verbindings is koolstofverbindings wat koolstof en waterstof bevat maar bevat ook dikwels suurstof, stikstof, ens. • Die unieke eienskappe van koolstof (C) is verantwoordelik vir die groot aantal en groot variasie in organiese verbindings. • Daar is meer as 3 miljoen organiese molekules bekend en feitlik alle verbindings wat vanaf lewende organismes verkry word, is organiese verbindings. Koolstof (C) vorm die basis van molekules in alle organismes. Kom ons kyk in van nader na hierdie merkwaardige element. Koolstof (C): Boustof van alle organiese verbindings • Koolstof het ‘n kovalente bindingsvermoë en kan bind aan ander koolstofatome en niemetale soos waterstof, suurstof of stikstof. • Hierdie bindings kan enkel, dubbel of trippel wees. • Koolstofatome wat bind kan ‘n lang ketting vorm soos in vetsure, ‘n vertakte ketting soos in aminosure, of ringe soos in purine van nukleïensure. Voorbeelde van verskillende vorms van koolstofbindings Ketting bv. propaan Ring bv. adenien Vertakte ketting bv. isopentaan Kombinasie van ‘n ring en ‘n ketting bv. ATP Voorbeelde van organiese verbindings met enkel- dubbel- en trippelbindings Enkelbinding bv. etaan Dubbelbinding bv. etileen Trippelbinding bv. asetileen Belangrike chemiese eienskappe van koolstof vir lewe 1. Koolstof is ‘n relatiewe klein atoom met ‘n lae atoommmassa. 2. Koolstof het die vermoë om vier sterk, stabiele kovalente bindings te vorm. 3. Dit het die vermoë om koolstof tot koolstof bindings te vorm en kan dus lang "koolstofgeraamtes” met ring- en/of kettingstrukture vorm. 4. Koolstof het die vermoë om veelvuldige kovalente bindings met ander koolstof-, suurstof- en stikstofatome te vorm. (Belangrike chemiese eienskappe van koolstof vir lewe) • Die bogenoemde eienskappe is verantwoordelik vir die groot verskeidenheid van moontlike organiese molekules. • Variasie kom hoofsaaklik op die volgende maniere voor: – grootte, wat bepaal word deur die aantal koolstofatome in die geraamte; – chemie, wat bepaal word deur die elemente en chemiese groepe wat aan die koolstof-atome geheg is, en hoe versadig die koolstofgeraamte is; – vorm, wat bepaal word deur geometrie wat ‘n gevolg is van die hoeke tussen die bindings.