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Mendelian Genetics Figure 14.1 Figure 14.3-1 EXPERIMENT P Generation (true-breeding parents) Purple flowers White flowers Figure 14.3-2 EXPERIMENT P Generation (true-breeding parents) F1 Generation (hybrids) Purple flowers White flowers All plants had purple flowers Self- or cross-pollination Figure 14.3-3 EXPERIMENT P Generation (true-breeding parents) Purple flowers White flowers F1 Generation (hybrids) All plants had purple flowers Self- or cross-pollination F2 Generation 705 purpleflowered plants 224 white flowered plants Table 14.1 Figure 14.4 Allele for purple flowers Locus for flower-color gene Pair of homologous chromosomes Allele for white flowers Figure 14.5-3 P Generation Appearance: Purple flowers White flowers Genetic makeup: pp PP p Gametes: P F1 Generation Appearance: Genetic makeup: Gametes: Purple flowers Pp 1/ 1/ 2 p 2 P Sperm from F1 (Pp) plant F2 Generation P Eggs from F1 (Pp) plant p 3 P p PP Pp Pp pp :1 Figure 14.6 3 Phenotype Genotype Purple PP (homozygous) Purple Pp (heterozygous) 1 2 1 Purple Pp (heterozygous) White pp (homozygous) Ratio 3:1 Ratio 1:2:1 1 Figure 14.7 TECHNIQUE Dominant phenotype, unknown genotype: PP or Pp? Predictions If purple-flowered parent is PP Sperm p p Recessive phenotype, known genotype: pp or If purple-flowered parent is Pp Sperm p p P Pp Eggs P Pp Eggs P p Pp Pp Pp Pp pp pp RESULTS or All offspring purple 1/ 2 offspring purple and 1/ offspring white 2 Figure 14.10-1 P Generation White CWCW Red CRCR Gametes CR CW Figure 14.10-2 P Generation White CWCW Red CRCR Gametes CR CW F1 Generation Gametes 1/2 CR Pink CRCW 1/ 2 CW Figure 14.10-3 P Generation White CWCW Red CRCR CR Gametes CW F1 Generation Pink CRCW 1/ Gametes 1/2 CR 2 CW Sperm F2 Generation 1/ 2 CR 1/ 2 CW Eggs 1/ 2 CR 1/ 2 CW CRCR CRCW CRCW CWCW Figure 14.11 (a) The three alleles for the ABO blood groups and their carbohydrates IA Allele Carbohydrate IB i none B A (b) Blood group genotypes and phenotypes Genotype IAIA or IAi IBIB or IBi IAIB ii A B AB O Red blood cell appearance Phenotype (blood group) Figure 14.14 Figure 14.13 AaBbCc AaBbCc Sperm 1/ 1/ 8 8 1/ 1/ Eggs 8 1/ 1/ 8 8 1/ 8 1/ 1/ 8 8 8 8 1/ 8 1/ 8 1/ 1/ 8 1/ 8 1/ 8 1/ 8 Phenotypes: Number of dark-skin alleles: 1/ 64 0 6/ 64 1 15/ 64 2 20/ 64 3 15/ 64 4 6/ 64 5 1/ 64 6 Figure 14.12 BbEe Eggs 1/ 4 BE 1/ 4 bE 1/ 4 Be 1/ 4 be Sperm 1/ BE 4 1/ BbEe 4 bE 1/ 4 Be 1/ 4 be BBEE BbEE BBEe BbEe BbEE bbEE BbEe bbEe BBEe BbEe BBee Bbee BbEe bbEe Bbee bbee 9 : 3 : 4 Figure 14.9 Rr Segregation of alleles into eggs Rr Segregation of alleles into sperm Sperm 1/ R 2 2 Eggs 4 r 2 r R R 1/ 1/ r 2 R R 1/ 1/ 1/ 4 r r R r 1/ 4 1/ 4 Figure 14.8 EXPERIMENT YYRR P Generation yyrr yr Gametes YR F1 Generation Predictions YyRr Hypothesis of dependent assortment Hypothesis of independent assortment Sperm or Predicted offspring of F2 generation 1/ Sperm 1/ 2 YR 1/ 2 2 YR YyRr YYRR Eggs 1/ 2 1/ 4 YR 4 Yr 4 yR 4 yr Eggs yr YyRr 3/ yyrr 1/ 4 YR 1/ 4 1/ Yr 4 yR 1/ 4 yr yr 1/ 1/ 4 1/ YYRR YYRr YyRR YyRr YYRr YYrr YyRr Yyrr YyRR YyRr yyRR yyRr YyRr Yyrr yyRr yyrr 4 Phenotypic ratio 3:1 1/ 9/ 16 3/ 16 3/ 16 1/ 16 Phenotypic ratio 9:3:3:1 RESULTS 315 108 101 32 Phenotypic ratio approximately 9:3:3:1 Figure 14.UN01 Probability of YYRR 1/4 (probability of YY) 1/4 (RR) 1/16 Probability of YyRR 1/2 (Yy) 1/4 (RR) 1/8 Figure 14.UN02 ppyyRr ppYyrr Ppyyrr PPyyrr ppyyrr 1/ (yy) 1/ (Rr) (probability of pp) 4 2 2 1/ 1/ 1/ 4 2 2 1/ 1/ 1/ 2 2 2 1/ 1/ 1/ 4 2 2 1/ 1/ 1/ 4 2 2 1/ Chance of at least two recessive traits 1/16 1/16 2/16 1/16 1/16 6/16 or 3/8 Figure 15.6 44 XY 44 XX Parents 22 22 X or Y 22 X Sperm Egg 44 XX or 44 XY (a) The X-Y system Zygotes (offspring) 22 XX 22 X 76 ZW 76 ZZ 32 (Diploid) 16 (Haploid) (b) The X-0 system (c) The Z-W system (d) The haplo-diploid system Figure 15.8 X chromosomes Allele for orange fur Early embryo: Two cell populations in adult cat: Allele for black fur Cell division and X chromosome inactivation Active X Inactive X Active X Black fur Orange fur Figure 15.7 XNXN Sperm Xn XNXn XnY Sperm XN Y XNY XNXn Sperm Xn Y XnY Y Eggs XN XNXn XNY Eggs XN XNXN XNY Eggs XN XNXn XNY XN XNXn XNY Xn XNXn XnY Xn XnXn XnY (a) (b) (c) Figure 14.15 Key Male 1st generation Affected male Female Affected female Mating 1st generation Ww ww Ww ww 2nd generation Ww ww 3rd generation WW or Ww Widow’s peak ff ff (a) Is a widow’s peak a dominant or recessive trait? Ff Ff Ff ff ff FF or Ff 3rd generation ww No widow’s peak ff Ff 2nd generation FF or Ff Ww ww ww Ww Ff Offspring Attached earlobe Free earlobe b) Is an attached earlobe a dominant or recessive trait? Figure 15.3 Figure 15.4a EXPERIMENT P Generation F1 Generation RESULTS F2 Generation All offspring had red eyes. Figure 15.4b CONCLUSION P Generation X X w X Y w w Eggs F1 Generation Sperm w w w w w Eggs F2 Generation w w w Sperm w w w w w w Figure 15.9-1 EXPERIMENT P Generation (homozygous) Wild type (gray body, normal wings) Double mutant (black body, vestigial wings) b b vg vg b b vg vg Figure 15.9-2 EXPERIMENT P Generation (homozygous) Wild type (gray body, normal wings) Double mutant (black body, vestigial wings) b b vg vg b b vg vg F1 dihybrid (wild type) b b vg vg TESTCROSS Double mutant b b vg vg Figure 15.9-3 EXPERIMENT P Generation (homozygous) Wild type (gray body, normal wings) Double mutant (black body, vestigial wings) b b vg vg b b vg vg F1 dihybrid (wild type) Double mutant TESTCROSS b b vg vg b b vg vg Testcross offspring Eggs b vg b vg Wild type Black(gray-normal) vestigial b vg Grayvestigial b vg Blacknormal b vg Sperm b b vg vg b b vg vg b b vg vg b b vg vg Figure 15.9-4 EXPERIMENT P Generation (homozygous) Wild type (gray body, normal wings) Double mutant (black body, vestigial wings) b b vg vg b b vg vg F1 dihybrid (wild type) Double mutant TESTCROSS b b vg vg b b vg vg Testcross offspring Eggs b vg b vg b vg Wild type Black(gray-normal) vestigial b vg Blacknormal Grayvestigial b vg Sperm b b vg vg b b vg vg b b vg vg b b vg vg PREDICTED RATIOS If genes are located on different chromosomes: 1 : 1 : 1 : 1 If genes are located on the same chromosome and parental alleles are always inherited together: 1 : 1 : 0 : 0 965 : 944 : 206 : 185 RESULTS Figure 15.10a Gray body, normal wings (F1 dihybrid) Testcross parents Black body, vestigial wings (double mutant) b vg b vg b vg b vg Replication of chromosomes Replication of chromosomes Meiosis I b vg b vg b vg b vg b vg b vg b vg b vg b vg Meiosis I and II b vg b vg b vg Meiosis II bvg Eggs Recombinant chromosomes b vg b vg b vg b vg Sperm Figure 15.10b Recombinant chromosomes Eggs Testcross offspring bvg 965 Wild type (gray-normal) b vg b vg b vg 944 Blackvestigial 206 Grayvestigial 185 Blacknormal b vg b vg b vg b vg b vg b vg b vg b vg Parental-type offspring Recombinant offspring Recombination 391 recombinants 100 17% frequency 2,300 total offspring b vg Sperm Figure 15.11 RESULTS Recombination frequencies 9% Chromosome 9.5% 17% b cn vg Figure 15.12 Mutant phenotypes Short aristae 0 Long aristae (appendages on head) Black body Cinnabar Vestigial eyes wings 48.5 57.5 Gray body Red eyes Brown eyes 67.0 104.5 Normal wings Red eyes Wild-type phenotypes Figure 15.13-1 Meiosis I Nondisjunction Figure 15.13-2 Meiosis I Nondisjunction Meiosis II Nondisjunction Figure 15.13-3 Meiosis I Nondisjunction Meiosis II Nondisjunction Gametes n1 n1 n1 n1 n1 n1 n n Number of chromosomes (a) Nondisjunction of homologous chromosomes in meiosis I (b) Nondisjunction of sister chromatids in meiosis II “Normal” Which phase of meiosis is this? Nondisjunction Figure 15.15 Figure 15.15b Figure 14.19 (a) Amniocentesis 1 (b) Chorionic villus sampling (CVS) Ultrasound monitor Amniotic fluid withdrawn Ultrasound monitor Fetus 1 Placenta Chorionic villi Fetus Placenta Uterus Cervix Cervix Uterus Suction tube inserted through cervix Centrifugation Fluid Fetal cells Several hours 2 Several weeks Biochemical and genetic tests Several hours Fetal cells 2 Several hours Several weeks 3 Karyotyping Edward’s Syndrome Clenched fists, small jaw, severe mental handicap, unlikely to survive past 3 months What causes Edward’s Syndrome? Turner’s Syndrome • Short female, most often sterile (infertile), no female development at puberty, no mental retardation • Treatment with growth hormone (increase height) and estrogen replacement (promote female development) • No treatment for sterility What causes Turner’s Syndrome? Klinefelter’s Syndrome Male with female secondary sex characteristics (wide hips, breasts, etc…) Usually tall and slender, no retardation Usually sterile (cannot reproduce) What causes Klinefelter’s Syndrome? Figure 15.14a (a) Deletion A B C D E F G H A deletion removes a chromosomal segment. A B C E F G H (b) Duplication A B C D E F G H A duplication repeats a segment. A B C B C D E F G H Figure 15.14b (c) Inversion A B C D E F G H An inversion reverses a segment within a chromosome. A D C B E F G H (d) Translocation A B C D E F G H M N O P Q R A translocation moves a segment from one chromosome to a nonhomologous chromosome. M N O C D E F G H A B P Q R Figure 15.16 Normal chromosome 9 Normal chromosome 22 Reciprocal translocation Translocated chromosome 9 Translocated chromosome 22 (Philadelphia chromosome) Cri du Chat Syndrome Larynx (voicebox) malformed, high pitched voice (cry of the cat), mental handicap What causes Cri du Chat? Figure 16.2 EXPERIMENT Living S cells (control) Living R cells (control) Heat-killed S cells (control) Mixture of heat-killed S cells and living R cells RESULTS Mouse dies Mouse healthy Mouse healthy Mouse dies Living S cells Figure 16.4-1 EXPERIMENT Phage Radioactive protein Bacterial cell Batch 1: Radioactive sulfur (35S) DNA Radioactive DNA Batch 2: Radioactive phosphorus (32P) Figure 16.4-2 EXPERIMENT Phage Radioactive protein Empty protein shell Bacterial cell Batch 1: Radioactive sulfur (35S) DNA Phage DNA Radioactive DNA Batch 2: Radioactive phosphorus (32P) Figure 16.4-3 EXPERIMENT Phage Radioactive protein Empty protein shell Radioactivity (phage protein) in liquid Bacterial cell Batch 1: Radioactive sulfur (35S) DNA Phage DNA Centrifuge Pellet (bacterial cells and contents) Radioactive DNA Batch 2: Radioactive phosphorus (32P) Centrifuge Radioactivity Pellet (phage DNA) in pellet Figure 16.UN04 Figure 16.6 (a) Rosalind Franklin (b) Franklin’s X-ray diffraction photograph of DNA Figure 16.1 Figure 16.7b (c) Space-filling model Figure 16.7a C Hydrogen bond G 3 end C G G 5 end G C A T C 3.4 nm A T G C G G C A T 1 nm C T C C A G T A T 3 end A T G A G G C C T A (a) Key features of DNA structure 0.34 nm 5 end (b) Partial chemical structure Figure 16.UN01 Purine purine: too wide Pyrimidine pyrimidine: too narrow Purine pyrimidine: width consistent with X-ray data Figure 16.8 Sugar Sugar Adenine (A) Thymine (T) Sugar Sugar Guanine (G) Cytosine (C) Figure 16.9-3 A T A T A T A T C G C G C G C G T A T A T A T A A T A T A T A T G C G C G C G C (a) Parent molecule (b) Separation of strands (c) “Daughter” DNA molecules, each consisting of one parental strand and one new strand Figure 16.10 Parent cell (a) Conservative model (b) Semiconservative model (c) Dispersive model First Second replication replication Figure 16.11a EXPERIMENT 1 Bacteria cultured in medium with 15N (heavy isotope) RESULTS 3 DNA sample centrifuged after first replication 2 Bacteria transferred to medium with 14N (lighter isotope) 4 DNA sample centrifuged after second replication Less dense More dense Figure 16.11b CONCLUSION Predictions: First replication Conservative model Semiconservative model Dispersive model Second replication Figure 16.12a (a) Origin of replication in an E. coli cell Origin of replication Parental (template) strand Daughter (new) strand Doublestranded DNA molecule Replication bubble Replication fork Two daughter DNA molecules 0.5 m Figure 16.12b (b) Origins of replication in a eukaryotic cell Double-stranded Origin of replication DNA molecule Parental (template) strand Bubble Daughter (new) strand Replication fork Two daughter DNA molecules 0.25 m Figure 16.13 Primase 3 Topoisomerase 3 5 RNA primer 5 3 Helicase 5 Single-strand binding proteins Figure 16.15a Leading strand Overview Origin of replication Lagging strand Primer Lagging strand Overall directions of replication Leading strand Figure 16.15b Origin of replication 3 5 RNA primer 5 3 3 Sliding clamp DNA pol III Parental DNA 5 3 5 5 3 3 5 Figure 16.16a Overview Leading strand Origin of replication Lagging strand Lagging strand 2 1 Overall directions of replication Leading strand Figure 16.16b-1 3 Template strand 5 3 5 Figure 16.16b-2 3 5 Template strand 3 5 3 5 1 RNA primer for fragment 1 3 5 Figure 16.16b-3 3 5 Template strand 3 5 3 5 3 1 RNA primer for fragment 1 3 5 Okazaki fragment 1 5 1 3 5 Figure 16.16b-4 3 5 Template strand 3 5 3 5 1 3 RNA primer for fragment 2 RNA primer for fragment 1 3 5 Okazaki fragment 1 5 1 5 3 3 5 2 Okazaki fragment 2 1 3 5 Figure 16.16b-5 3 5 Template strand 3 5 3 5 1 3 RNA primer for fragment 2 RNA primer for fragment 1 3 5 Okazaki fragment 1 5 1 3 5 5 3 2 Okazaki fragment 2 1 5 3 3 5 2 1 5 3 3 5 Figure 16.16b-6 3 5 Template strand 3 5 3 5 1 3 RNA primer for fragment 2 RNA primer for fragment 1 3 5 Okazaki fragment 1 5 1 3 5 5 3 2 Okazaki fragment 2 1 3 5 5 3 2 1 5 3 3 5 2 1 3 5 Overall direction of replication Figure 16.17 Overview Origin of replication Leading strand Leading strand Lagging strand Overall directions of replication Lagging strand Leading strand DNA pol III 5 3 3 Parental DNA Primer 5 3 Primase 5 DNA pol III 4 Lagging strand DNA pol I 35 3 2 DNA ligase 1 3 5 Figure 16.22a Nucleosome (10 nm in diameter) DNA double helix (2 nm in diameter) H1 Histones DNA, the double helix Histones Histone tail Nucleosomes, or “beads on a string” (10-nm fiber) Figure 16.22b Chromatid (700 nm) 30-nm fiber Loops Scaffold 300-nm fiber 30-nm fiber Replicated chromosome (1,400 nm) Looped domains Metaphase (300-nm fiber) chromosome