Survey
* Your assessment is very important for improving the work of artificial intelligence, which forms the content of this project
* Your assessment is very important for improving the work of artificial intelligence, which forms the content of this project
LOCUS DEFINITION Exported 9377 bp ds-DNA circular SYN 29-JAN-2014 Lentiviral Gateway(R) destination vector with a blasticidin resistance marker and a V5 epitope tag, for strong expression and improved plasmid yield and viral titer. ACCESSION . VERSION . KEYWORDS pLX304 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 9377) AUTHORS Yang X, Boehm JS, Yang X, Salehi-Ashtiani K, Hao T, Shen Y, Lubonja R, Thomas SR, Alkan O, Bhimdi T, Green TM, Johannessen CM, Silver SJ, Nguyen C, Murray RR, Hieronymus H, Balcha D, Fan C, Lin C, Ghamsari L, Vidal M, Hahn WC, Hill DE, Root DE. TITLE A public genome-scale lentiviral expression library of human ORFs. JOURNAL Nat. Methods 2011;8:659-61. PUBMED 21706014 REFERENCE 2 (bases 1 to 9377) AUTHORS Root Lab TITLE Direct Submission JOURNAL Exported Monday, Mar 31, 2014 from SnapGene 2.3.2 http://www.snapgene.com FEATURES Location/Qualifiers source 1..9377 /organism="synthetic DNA construct" /lab_host="Mammalian Cells" /mol_type="other DNA" enhancer 65..368 /note="CMV enhancer" /note="human cytomegalovirus immediate early enhancer" promoter 369..572 /note="CMV promoter" /note="human cytomegalovirus (CMV) immediate early promoter" protein_bind 595..719 /gene="mutant version of attR" /bound_moiety="LR Clonase(TM)" /note="attR1" /note="recombination site for the Gateway(R) LR reaction" promoter 744..774 /note="lac UV5 promoter" /note="E. coli lac promoter with an ""up"" mutation" CDS 828..1487 /codon_start=1 /gene="cat" /product="chloramphenicol acetyltransferase" /note="CmR" /note="confers resistance to chloramphenicol" /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA" CDS 1829..2134 /codon_start=1 /gene="ccdB" /product="CcdB, a bacterial toxin that poisons DNA gyrase" /note="ccdB" /note="Plasmids containing the ccdB gene cannot be propagated in standard E. coli strains." /translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI" protein_bind complement(2175..2299) /gene="mutant version of attR" /bound_moiety="LR Clonase(TM)" /note="attR2" /note="recombination site for the Gateway(R) LR reaction" CDS 2301..2342 /codon_start=1 /product="epitope tag from simian virus 5" /note="V5 tag" /translation="GKPIPNPLLGLDST" misc_feature 2343..2351 /note="stop codons" misc_feature 2384..2972 /note="WPRE" /note="woodchuck hepatitis virus posttranscriptional regulatory element" LTR 3044..3277 /note="3' LTR (Delta-U3)" /note="self-inactivating 3' long terminal repeat (LTR) from HIV-1" polyA_signal 3355..3476 /note="SV40 poly(A) signal" /note="SV40 polyadenylation signal" rep_origin 3516..3651 /note="SV40 ori" /note="SV40 origin of replication" rep_origin 3858..4313 /direction=RIGHT /note="f1 ori" /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" promoter 4339..4443 /gene="bla" /note="AmpR promoter" CDS 4444..5304 /codon_start=1 /note="AmpR" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" rep_origin promoter LTR misc_feature misc_feature promoter CDS 5475..6063 /direction=RIGHT /note="ori" /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" 6530..6758 /note="RSV promoter" /note="Rous sarcoma virus enhancer/promoter" 6759..6939 /note="5' LTR (truncated)" /note="truncated 5' long terminal repeat (LTR) from HIV-1" 6986..7111 /note="HIV-1 Psi" /note="packaging signal of human immunodeficiency virus type 1" 7604..7837 /note="RRE" /note="The Rev response element (RRE) of HIV-1 allows for Rev-dependent mRNA export from the nucleus to the cytoplasm." 8241..8741 /note="hPGK promoter" /note="human phosphoglycerate kinase 1 (PGK1) promoter" 8753..9148 /codon_start=1 /gene="Aspergillus terreus BSD" /product="blasticidin S deaminase" /note="BSD" /note="confers resistance to blasticidin" /translation="MAKPLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTG VNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGI KAIVKDSDGQPTAVGIRELLPSGYVWEG" misc_feature 9208..9325 /note="cPPT/CTS" /note="central polypurine tract and central sequence of HIV-1" ORIGIN 1 cccggggtta ttaatagtaa tcaattacgg ggtcattagt tcatagccca 61 tccgcgttac ataacttacg gtaaatggcc cgcctggctg accgcccaac 121 cattgacgtc aataatgacg tatgttccca tagtaacgcc aatagggact 181 gtcaatgggt ggagtattta cggtaaactg cccacttggc agtacatcaa 241 tgccaagtac gccccctatt gacgtcaatg acggtaaatg gcccgcctgg 301 agtacatgac cttatgggac tttcctactt ggcagtacat ctacgtatta 361 ttaccatggt gatgcggttt tggcagtaca tcaatgggcg tggatagcgg 421 ggggatttcc aagtctccac cccattgacg tcaatgggag tttgttttgg 481 aacgggactt tccaaaatgt cgtaacaact ccgccccatt gacgcaaatg 541 gtgtacggtg ggaggtctat ataagcagag ctctctggct aactgtcggg 601 ttgtacaaaa aagctgaacg agaaacgtaa aatgatataa atatcaatat 661 attttgcata aaaaacagac tacataatac tgtaaaacac aacatatcca 721 cggccgcatt aggcacccca ggctttacac tttatgcttc cggctcgtat 781 ttttgagtta ggatccgtcg agattttcag gagctaagga agctaaaatg 841 tcactggata taccaccgtt gatatatccc aatggcatcg taaagaacat termination tatatggagt gacccccgcc ttccattgac gtgtatcata cattatgccc gtcatcgcta tttgactcac caccaaaatc ggcggtaggc atcaacaagt attaaattag gtcactatgg aatgtgtgga gagaaaaaaa tttgaggcat 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 ttcagtcagt taaagaccgt gcctgatgaa gggatagtgt tctggagtga cgtgttacgg tctcagccaa acttcttcgc tgccgctggc ttaatgaatt gcttactaaa tatatactga tacagtgaca tccggtctgg aaagcggaaa tttgctgacg gagccgttat gatggtgatc cccggtggtg gccggtctcc aaacgccatt gtctgcaggt ttttatgcaa ctttcttgta cgtagtaatg caaaatttgt atacgctgct ctccttgtat acgtggcgtg cacctgtcag catcgccgcc cgtggtgttg gattctgcgc ttcccgcggc gagtcggatc gcagctgtag tcccaacgaa tgagcctggg ccttgagtgc ctcagaccct cttattattc tttattgcag gcattttttt gtctggctct ccgcccattc cctcggcctc acccaattcg tcgtgactgg cgccagctgg cctgaatggc tacgcgcagc cccttccttt tttagggttc tggttcacgt tgctcaatgt aaagaaaaat tgctcatccg tcacccttgt ataccacgac tgaaaacctg tccctgggtg ccccgttttc gattcaggtt acaacagtac agccagataa tatgtatacc gttgacagcg taagcacaac atcaggaagg agaacagggg cgtctgtttg cccctggcca catatcgggg gttatcgggg aacctgatgt cgaccatagt aatctaattt caaagtggtt agctagcgct gaaagattga ttaatgcctt aaatcctggt gtgtgcactg ctcctttccg tgccttgccc tcggggaaat gggacgtcct ctgctgccgg tccctttggg atcttagcca gacaagatct agctctctgg ttcaagtagt tttagtcagt agtatttata cttataatgg cactgcattc agctatcccg tccgccccat tgagctattc ccctatagtg gaaaaccctg cgtaatagcg gaatgggacg gtgaccgcta ctcgccacgt cgatttagtg agtgggccat acctataacc aagcacaagt gaattccgta tacaccgttt gatttccggc gcctatttcc agtttcacca accatgggca catcatgccg tgcgatgagt cagtatgcgt cgaagtatgt acagctatca catgcagaat gatggctgag ctggtgaaat tggatgtaca gtgcacgtct atgaaagctg aagaagtggc tctggggaat gactggatat aatatattga ggtaagccta aaccggtggc ctggtattct tgtatcatgc tgctgtctct tgtttgctga ggactttcgc gctgctggac catcgtcctt tctgctacgt ctctgcggcc ccgcctcccc ctttttaaaa gctttttgct ctaactaggg gtgtgcccgt gtggaaaatc acttgcaaag ttacaaataa tagttgtggt cccctaactc ggctgactaa cagaagtagt agtcgtatta gcgttaccca aagaggcccg cgccctgtag cacttgccag tcgccggctt ctttacggca cgccctgata agaccgttca tttatccggc tggcaatgaa tccatgagca agtttctaca ctaaagggtt gttttgattt aatattatac tttgtgatgg ggcagggcgg atttgcgcgc caaaaagagg gttgctcaag gaagcccgtc gtcgcccggt gcagtttaag gagtgatatt gctgtcagat gcgcatgatg tgatctcagc ataaatgtca gttgtgtttt tatttatatc tccctaaccc gcgttaagtc taactatgtt tattgcttcc ttatgaggag cgcaaccccc tttccccctc aggggctcgg tccttggctg cccttcggcc tcttccgcgt gcgtcgactt gaaaaggggg tgtactgggt aacccactgc ctgttgtgtg tctagcagta aaatgaatat agcaatagca ttgtccaaac cgcccatccc ttttttttat gaggaggctt cgcgcgctca acttaatcgc caccgatcgc cggcgcatta cgccctagcg tccccgtcaa cctcgacccc gacggttttt gctggatatt ctttattcac agacggtgag aactgaaacg catatattcg tattgagaat aaacgtggcc gcaaggcgac cttccatgtc ggcgtaaaga tgatttttgc tatgctatga gcatatatga gtctgcgtgc ttattgaaat gtttacacct attgacacgc aaagtctccc accaccgata caccgcgaaa ggctccctta acagtattat attttacgtt tctcctcggt gacaatcaac gctcctttta cgtatggctt ttgtggcccg actggttggg cctattgcca ctgttgggca ctcgcctgtg ctcaatccag cttcgccttc taagaccaat gactggaagg ctctctggtt ttaagcctca actctggtaa cgtatagtag cagagagtga tcacaaattt tcatcaatgt gcccctaact ttatgcagag ttttggaggc ctggccgtcg cttgcagcac ccttcccaac agcgcggcgg cccgctcctt gctctaaatc aaaaaacttg cgccctttga acggcctttt attcttgccc ctggtgatat ttttcatcgc caagatgtgg atgtttttcg aatatggaca aaggtgctga ggcagaatgc tctggatccg ggtataagaa agcagcgtat tgtcaatatc cgaacgctgg gaacggctct ataaaagaga ccgggcgacg gtgaacttta tggccagtgt atgacatcaa tacacagcca gtagtctgtt tctcgttcag ctcgattcta ctctggatta cgctatgtgg tcattttctc ttgtcaggca gcattgccac cggcggaact ctgacaattc ttgccacctg cggaccttcc gccctcagac gacttacaag gctaattcac agaccagatc ataaagcttg ctagagatcc ttcatgtcat gaggaacttg cacaaataaa atcttatcat ccgcccagtt gccgaggccg ctagggacgt ttttacaacg atcccccttt agttgcgcag gtgtggtggt tcgctttctt gggggctccc attagggtga cgttggagtc 4141 4201 4261 4321 4381 4441 4501 4561 4621 4681 4741 4801 4861 4921 4981 5041 5101 5161 5221 5281 5341 5401 5461 5521 5581 5641 5701 5761 5821 5881 5941 6001 6061 6121 6181 6241 6301 6361 6421 6481 6541 6601 6661 6721 6781 6841 6901 6961 7021 7081 7141 7201 7261 7321 cacgttcttt ctattctttt gatttaacaa acttttcggg atgtatccgc agtatgagta cctgtttttg gcacgagtgg cccgaagaac tcccgtattg ttggttgagt ttatgcagtg atcggaggac cttgatcgtt atgcctgtag gcttcccggc cgctcggccc tctcgcggta tacacgacgg gcctcactga gatttaaaac atgaccaaaa atcaaaggat aaaccaccgc aaggtaactg ttaggccacc ttaccagtgg tagttaccgg ttggagcgaa acgcttcccg gagcgcacga cgccacctct aaaaacgcca atgttctttc gctgataccg gaagagcgcc tggcacgaca tagctcactc ggaattgtga cgcgcaatta atgcaatact gagagaaaaa taggaaggca gagatattgt tctgagcctg tgccttgagt ccctcagacc gaaagcgaaa cacggcaaga ctagaaggag atgggaaaaa atgggcaagc aggctgtaga tagatcatta aatagtggac gatttataag aaatttaacg gaaatgtgcg tcatgagaca ttcaacattt ctcacccaga gttacatcga gttttccaat acgccgggca actcaccagt ctgccataac cgaaggagct gggaaccgga caatggcaac aacaattaat ttccggctgg tcattgcagc ggagtcaggc ttaagcattg ttcattttta tcccttaacg cttcttgaga taccagcggt gcttcagcag acttcaagaa ctgctgccag ataaggcgca cgacctacac aagggagaaa gggagcttcc gacttgagcg gcaacgcggc ctgcgttatc ctcgccgcag caatacgcaa ggtttcccga attaggcacc gcggataaca accctcacta cttgtagtct gcaccgtgca acagacgggt atttaagtgc ggagctctct gcttcaagta cttttagtca gggaaaccag ggcgaggggc agagatgggt attcggttaa agggagctag caaatactgg tataatacag tcttgttcca ggattttgcc cgaattttaa cggaacccct ataaccctga ccgtgtcgcc aacgctggtg actggatctc gatgagcact agagcaactc cacagaaaag catgagtgat aaccgctttt gctgaatgaa aacgttgcgc agactggatg ctggtttatt actggggcca aactatggat gtaactgtca atttaaaagg tgagttttcg tccttttttt ggtttgtttg agcgcagata ctctgtagca tggcgataag gcggtcgggc cgaactgaga ggcggacagg agggggaaac tcgatttttg ctttttacgg ccctgattct ccgaacgacc accgcctctc ctggaaagcg ccaggcttta atttcacaca aagggaacaa tgcaacatgg tgccgattgg ctgacatgga ctagctcgat ggctaactag gtgtgtgccc gtgtggaaaa aggagctctc ggcgactggt gcgagagcgt ggccaggggg aacgattcgc gacagctaca tagcaaccct aactggaaca gatttcggcc caaaatatta atttgtttat taaatgcttc cttattccct aaagtaaaag aacagcggta tttaaagttc ggtcgccgca catcttacgg aacactgcgg ttgcacaaca gccataccaa aaactattaa gaggcggata gctgataaat gatggtaagc gaacgaaata gaccaagttt atctaggtga ttccactgag ctgcgcgtaa ccggatcaag ccaaatactg ccgcctacat tcgtgtctta tgaacggggg tacctacagc tatccggtaa gcctggtatc tgatgctcgt ttcctggcct gtggataacc gagcgcagcg cccgcgcgtt ggcagtgagc cactttatgc ggaaacagct aagctggagc taacgatgag tggaagtaag ttggacgaac acataaacgg ggaacccact gtctgttgtg tctctagcag tcgacgcagg gagtacgcca cagtattaag aaagaaaaaa agttaatcct accatccctt ctattgtgtg acactcaacc tattggttaa acgcttacaa ttttctaaat aataatattg tttttgcggc atgctgaaga agatccttga tgctatgtgg tacactattc atggcatgac ccaacttact tgggggatca acgacgagcg ctggcgaact aagttgcagg ctggagccgg cctcccgtat gacagatcgc actcatatat agatcctttt cgtcagaccc tctgctgctt agctaccaac ttcttctagt acctcgctct ccgggttgga gttcgtgcac gtgagctatg gcggcagggt tttatagtcc caggggggcg tttgctggcc gtattaccgc agtcagtgag ggccgattca gcaacgcaat ttccggctcg atgaccatga tgcaagctta ttagcaacat gtggtacgat cactgaattg gtctctctgg gcttaagcct tgactctggt tggcgcccga actcggcttg aaaattttga cgggggagaa tataaattaa ggcctgttag cagacaggat catcaaagga ctatctcggt aaaatgagct tttaggtggc acattcaaat aaaaaggaag attttgcctt tcagttgggt gagttttcgc cgcggtatta tcagaatgac agtaagagaa tctgacaacg tgtaactcgc tgacaccacg acttactcta accacttctg tgagcgtggg cgtagttatc tgagataggt actttagatt tgataatctc cgtagaaaag gcaaacaaaa tctttttccg gtagccgtag gctaatcctg ctcaagacga acagcccagc agaaagcgcc cggaacagga tgtcgggttt gagcctatgg ttttgctcac ctttgagtga cgaggaagcg ttaatgcagc taatgtgagt tatgttgtgt ttacgccaag atgtagtctt gccttacaag cgtgccttat ccgcattgca ttagaccaga caataaagct aactagagat acagggactt ctgaagcgcg ctagcggagg ttagatcgcg aacatatagt aaacatcaga cagaagaact tagagataaa 7381 7441 7501 7561 7621 7681 7741 7801 7861 7921 7981 8041 8101 8161 8221 8281 8341 8401 8461 8521 8581 8641 8701 8761 8821 8881 8941 9001 9061 9121 9181 9241 9301 9361 // agacaccaag acagcaagcg gtgaattata caaagagaag ggttcttggg ccagacaatt cgcaacagca tggctgtgga aactcatttg agatttggaa taatacactc tggaattaga atataaaatt tactttctat tcccaacccc gcggctgctc tcttcacgtc cgacgcttcc cgtgacaaac caatggcagc ccgagagcag ccctgttcct tcggctccct gcctttgtct ccccatctct cactggtgtc cactgctgct caggggcatc gatcaaagcc gctgccctct gagacaaatg tgcaggggaa acaaattaca gcgccggctc gaagctttag gccgctgatc taaatataaa agtggtgcag agcagcagga attgtctggt tctgttgcaa aagataccta caccactgct tcacacgacc cttaattgaa taaatgggca attcataatg agtgaataga gaggggaccc tgggcgtggt cgttcgcagc tgctccgccc ggaagccgca gcgccgaccg cggccgggaa gcccgcgcgg cgttgaccga caagaagaat gaagactaca aatgtatatc gctgcggcag ttgagcccct atagtgaagg ggttatgtgt gcagtattca agaatagtag aaaattcaaa gaggggg acaagataga ttcagacctg gtagtaaaaa agagaaaaaa agcactatgg atagtgcagc ctcacagtct aaggatcaac gtgccttgga tggatggagt gaatcgcaaa agtttgtgga atagtaggag gttaggcagg ttgcgccttt tccgggaaac gtcacccgga ctaagtcggg cgtctcacta cgatgggctg ggggcggtgc tgttccgcat atcaccgacc ccaccctcat gcgtcgccag attttactgg ctggcaacct gcggacggtg acagtgatgg gggagggcct tccacaattt acataatagc attttcgggt ggaagagcaa gaggaggaga ttgaaccatt gagcagtggg gcgcagcgtc agcagaacaa ggggcatcaa agctcctggg atgctagttg gggacagaga accagcaaga attggtttaa gcttggtagg gatattcacc tccaaggcag gcagcggcgc tcttcgccgc aaggttcctt gtaccctcgc tggccaatag gggaggcggg tctgcaagcc tctctcccca tgaaagagca cgcagctctc gggaccttgt gacttgtatc ccgacaggtg acagccgacg gcagctgcag taaaagaaaa aacagacata ttattacagg aacaaaagta tatgagggac aggagtagca aataggagct aatgacgctg tttgctgagg gcagctccag gatttggggt gagtaataaa aattaacaat aaagaatgaa cataacaaat tttaagaata attatcgttt ccctgggttt cgaccctggg tacccttgtg gcggttcgcg agacggacag cggctgctca gtgtggggcg tccggagcgc gggggtacca acggctacaa tctagcgacg gcagaactcg gtcgcgatcg cttctcgatc gcagttggga tagtaagaat ggggggattg caaactaaag gacagcagag agaccaccgc aattggagaa cccaccaagg ttgttccttg acggtacagg gctattgagg gcaagaatcc tgctctggaa tctctggaac tacacaagct caagaattat tggctgtggt gtttttgctg cagacccacc gcgcagggac tctcgcacat ggccccccgg gcgtgccgga cgccagggag gcagggcgcg gtagtgtggg acgtcggcag ccatggccaa tcaacagcat gccgcatctt tggtgctggg gaaatgagaa tgcatcctgg ttcgtgaatt tctagatctt gggggtacag aattacaaaa atccactttg