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PROTEASE Inhibitors P roteases are a family of naturally occurring regulatory enzymes that cleave the peptide bonds between the amino acids of polypeptide chains. They can be classified into six broad groups depending on the amino acid at which they cleave. These include Serine proteases, Threonine proteases, Cysteine proteases, Aspartate proteases, Metalloproteases, and Glutamic acid proteases. Based on the optimal pH of their activity, they are sub-classified into acid proteases, neutral proteases and alkaline proteases. Protease inhibitors are compounds that inhibit specific proteases (mentioned above). A delicate equilibrium of these proteases and their respective inhibitors can control proteolytic cascades, thereby regulating key events like coagulation, inflammation and acute phase response in the body. During protein expression and isolation, endogenous cellular proteases can rapidly digest cellular proteins resulting in substantially diminished quality and quantity of protein samples needed for characterization and analysis. BioVision has introduced a new and exciting line of general, as well as specific protease inhibitors and cocktails which can prevent in vitro proteolysis events. These protease inhibitors and cocktails are provided in an easy-to-use form and can be employed for inhibition of a broad range of proteases. The inhibitor cocktail kits are designed to include various combinations of inhibitors at their optimum concentrations, providing researchers with a number of options to specifically choose from, including the EDTA-free form. Some commonly used Protease Inhibitors and their Properties Product Cat. No. Sizes Target Protease Solubility/Suggested working concentration Comments AEBSF, hydrochloride 1644-200, 1644-1000 200 mg 1g Serine proteases • Soluble in H2O • Working concentration: 0.1 -5 mM in cell culture; in other applications: 0.1 -0.25 µM Aqueous solutions are stable for several months between pH 5.0 – 6.0; limited stability above pH 7.5 Aprotinin, bovine lung 4690-5 4690-100 4690-1000 5 mg 100 mg 1g Serine proteases and esterases • Soluble in H2O, aqueous buffers • Working concentration: In cell culture: 0.01-3 µg/ ml; in other applications: 10-250 µg/ml Sterile filtered solutions at pH 5.0-8.0 are stable for several months. Denatures at pH>12. Avoid repeated freeze thawing Bestatin 1733-25 1733-100 25 mg 100 mg Aminopeptidases • Soluble in MeOH • Working concentration: 1-10 µM Does not inhibit carboxypeptidases E-64 1739-5 1739-25 5 mg 25 mg Cysteine proteases • Soluble in H2O • Working concentration: 1-10 µM - Leupeptin, hemisulfate 1648-25 1648-50 1648-100 25 mg 50 mg 100 mg Serine and thiol proteases • Soluble in H2O • Working concentration: 1-100 µM Stable for several months when stored in aliquots at -20°C Nafamostat mesylate 1760-10 1760-50 10 mg 50 mg Serine proteases • Soluble in H2O or DMSO • Working concentration: 50 µg/ml Stable for 4 weeks if stored at 4°C and several months if stored at -80°C Pepstatin A 1732-25 1732-100 25 mg 100 mg Aspartic proteases •Soluble in DMSO or MeOH • Working concentration: 1-10 µM - PMSF 1548-5 5 mg Serine proteases • Soluble in isopropanol • Working concentration: 0.1-1 µM Unstable in aqueous solutions; add fresh at each step EZBlock™ Protease Inhibitor Cocktails Product Cat. No. Sizes Inhibitors Target Proteases Application/Comments Protease Inhibitor Cocktail, EDTA-Free K271-500 1 kit Aprotinin, bovine lung, Leupeptin hemisulfate, Pepstatin A, and PMSF Aspartic, Cysteine, Serine proteases, and esterases A general use cocktail. Reconstitution in DMSO provides a 500X stock solution EZBlock™ Protease Inhibitor Cocktail, EDTA-Free K272-1 K272-5 K272-1EA 1 ml AEBSF hydrochloride, Aprotinin, 5 ml bovine lung, Bestatin, E-64, 1 set (5 x 1 ml) Leupeptin hemisulfate, and Pepstatin A Aspartic , Cysteine, Serine, Trypsin-like proteases, Aminopeptidases and Esterases For use in mammalian cell and tissue extracts and for bacterial cell extracts using metal chelation chromatography. Provided as a 200X stock solution EZBlock™ Protease Inhibitor Cocktail II K277- 1EA Cysteine, Serine, Trypsin-like 1 set ( 1x 5 ml) AEBSF hydrochloride, Aprotinin, bovine lung, E-64, EDTA, Disodium, proteases, Aminopeptidases, and Leupeptin hemisulfate Metalloproteases, and Esterases EZBlock™ Protease Inhibitor Cocktail III K278- 1EA 1 set ( 1x 5 ml) AEBSF hydrochloride, Bestatin, E-64, EDTA, Disodium, and Pepstatin A EZBlock™ Protease Inhibitor Cocktail IV K279- 1 K279-1EA 1 ml, AEBSF hydrochloride, E-64, Aspartic, Cysteine, Serine 1 set ( 5 x 1 ml) Pepstatin A, and o-Phenanthroline proteases, and Metalloproteases www.biovision.com | 800-891-9699 A general use cocktail. Reconstitution in DMSO provides a 100X stock solution Aspartic, Cysteine, Serine For use in bacterial cell extracts (where proteases, Aminopeptidases, and no metal ion chromatography is used). Metalloproteases The cocktail should be reconstituted in DMSO: water mixture For use in fungal and yeast cell extracts PHOSPHATASE Inhibitors P rotein phosphorylation is the most common and important form of reversible protein posttranslational modification (PTM), with up to 30% of all proteins being phosphorylated at any given time. Protein kinases (PKs) are the effectors of phosphorylation and catalyze the transfer of a γ-phosphate group from ATP to specific amino acids on proteins. Proteins are phosphorylated predominantly on Ser, Thr and Tyr residues, which account for 86, 12 and 2% respectively of the phosphoproteome, at least in mammals. In contrast, protein phosphatases (PPs) are the primary effectors of dephosphorylation, and are responsible for restoring the protein to its original dephosphorylated state. Phosphatases can be classified as non-specific phosphatases (e.g. acid or alkaline phosphatases), serine/threonine-specific, tyrosine-specific and dual-specific phosphatases (Ser/Thr & Tyr). A wide range of biological processes are controlled by phosphorylation and dephosphorylation of proteins. In order to understand the accurate phosphorylated status of a protein, it is important to preserve the phosphorylation state of the proteins during the extraction of phosphoproteins from tissue and cell sample lysates. BioVision introduces four different EZBlock™ Phosphatase Inhibitor Cocktails and two new Universal Protease and Phosphatase inhibitor cocktails which would provide protection against both proteases and phosphatases during protein extraction and purification. Phosphatase Inhibitors Product Cat. No. Sizes Target Phosphatase Solubility bpV(phen) 1793-5 5 mg Protein Tyrosine Phosphatase (PTP) and PTEN DMSO or H2O bpV(pic) 1794-5 5 mg Protein Tyrosine Phosphatase (PTP) and PTEN DMSO or H2O Calyculin A 1562-025 25 µg Ser/Thr phosphatases (PP1 and PP2) DMSO or EtOH Cyclosporine A 1522-100, 1522-1G 100 mg, 1 g Cyclosporine-Cyclophilin complex inhibits PP2B (Calcineurin) DMSO or EtOH FK-506 1563-1, 1563-10 1 mg, 10 mg Protein phosphatase 2B DMSO or EtOH Okadaic Acid 1543-025 25 µg Ser/Thr phosphatases (PP1, PP2A and PP2B) DMSO or EtOH Okadaic Acid Ammonium Salt 1766-025 25 µg Ser/Thr phosphatases (PP1, PP2A and PP2B) DMSO or EtOH Okadaic Acid Potassium Salt 1765-025 25 µg Ser/Thr phosphatases (PP1, PP2A and PP2B) DMSO or EtOH Okadaic Acid Sodium Salt 1764-025 25 µg Ser/Thr phosphatases (PP1, PP2A and PP2B) DMSO or EtOH VO-OHpic 1801-5, 1801-25 5 mg, 25 mg PTEN H2O EZBlock™ Phosphatase Inhibitor Cocktails Product Cat. No. Sizes Inhibitors Target Phosphatases Comments EZBlock™ Phosphatase Inhibitor Cocktail I K273-1 K273-1EA 1 ml Sodium fluoride, Sodium orthovanadate, Acid phosphatases, Alkaline Provided as a 50X stock 1 set (5 x 1 ml) Sodium pyrophosphate decahydrate, and phosphatases, Ser/Thr phosphatases, solution in H2O b-Glycerophosphate and Protein Tyrosine Phosphatases EZBlock™ Phosphatase Inhibitor Cocktail II K275-1 K275-1EA 1 ml Imidazole, Sodium fluoride, Sodium 1 set (5 x 1 ml) molybdate, Sodium orthovanadate, and Sodium tartrate Acid phosphatases, Alkaline Provided as a 100X phosphatases, Ser/Thr phosphatases, stock solution in H2O and Protein Tyrosine Phosphatases EZBlock™ Phosphatase Inhibitor Cocktail III K276-1 K276-1EA 1 ml p-Bromotetramisole oxalate, Cantharidin, Alkaline phosphatases and Ser/Thr 1 set (5 x 1 ml) and Calyculin A phosphatases (PP1 and PP2A) Provided as a 50X stock solution in DMSO EZBlock™ Phosphatase Inhibitor Cocktail IV K282-1 K282-1EA 1 ml Imidazole, b-Glycerophosphate, Sodium Acid phosphatases, Alkaline Provided as a 100X 1 set (5 x 1 ml) fluoride, Sodium molybdate, Sodium phosphatases, Ser/Thr phosphatases, stock solution in H2O orthovanadate, and Sodium tartrate and Protein Tyrosine Phosphatases EZBlock™ Universal Protease and Phosphatase Inhibitor Cocktails Product Cat. No. Sizes EZBlock™ Universal Protease and Phosphatase Inhibitor Cocktail K283-1 K283-1EA EZBlock™ Universal Protease and Phosphatase Inhibitor Cocktail, EDTA-Free K284-1 K284-1EA Inhibitors Target Proteases/Phosphatases Application/Comments 1 ml Aprotinin, Bestatin, E-64, Leupeptin, 1 set (5 x 1 ml) b-Glycerophosphate, Sodium fluoride, Sodium orthovanadate, Sodium pyrophosphate and EDTA, Disodium. Cysteine proteases, Serine proteases, trypsin-like proteases, esterases, Aminopeptidases, Metalloproteases, Acid phosphatases, alkaline phosphatases, Ser/Thr phosphatases, and Protein Tyrosine Phosphatases Provided as a 10X aqueous solution. This cocktail does not contain AEBSF and thus should be mass spectrometry (MS) compatible. 1 ml, Aprotinin, Bestatin, E-64, Leupeptin 1 set (5 x 1 ml) hemisulfate, b-Glycerophosphate, Sodium fluoride, Sodium orthovanadate, and Sodium pyrophosphate Cysteine proteases, Serine proteases, trypsin-like proteases, esterases, Aminopeptidases, Acid phosphatases, alkaline phosphatases, Ser/Thr phosphatases, and Protein Tyrosine Phosphatases Provided as a 10X aqueous solution. This cocktail does not contain AEBSF and thus should be mass spectrometry (MS) compatible. www.biovision.com | 800-891-9699 www.biovision.com USA BioVision, Inc. 155 South Milpitas Blvd. Milpitas, CA 95035 Phone: 800-891-9699 Customer Service [email protected] Technical Support [email protected] To Place an Order [email protected] OEM or Bulk Order Inquiries [email protected] BioVision’s EZBlock™ Phosphatase Inhibitor Cocktail I (50X), Cat# K273-1 was used to test it’s ability to inhibit purified Alkaline Phosphatase (Calf thymus) and Acid Phosphatase (wheat germ) using methylumbelliferyl phosphate disodium (MUP) as a substrate. In each reaction, MUP was used at 500 pmol/well and our EZBlock™ Phosphatase Inhibitor Cocktail I (50X) was added at 0, 50-fold (50X), 25-fold (25X) or 10-fold (10X) dilution into the final reaction volume. Equal amounts of Alkaline Phosphatase or Acid Phosphatase were added to their respective wells and the amount of MUP hydrolyzed was detected fluorometrically (Ex/ Em = 360/440 nm). BioVision’s EZBlock™ Phosphatase Inhibitor Cocktail I (50X) used at 50X, 25X and 10X dilutions inhibited Alkaline Phosphatase activity by 85 %, 90 % and 96 %, respectively and that of Acid Phosphatase activity by 80 %, 85% and 96 %, respectively. Vehicle Control (DMSO) had no effect (data not shown).