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Classification of Biological Diversity Slide 2 Classification systems serve a number of important roles. Firstly, they allow us to recognize and interpret similarities and differences among organisms and arrange them into groups according to specific traits. Secondly, having similar organisms classified into a group also allows predictions of a specific trait that is consistent with the group. For example, a secondary metabolite isolated from a particular plant species may have pharmaceutical properties. The same molecule may be found in higher concentrations in other plant species in the same group. Thirdly, when organisms are classified into groups they are given a unique name according to their genera and species. The language used in naming organisms is universal and people throughout the world are able to recognize a specific organism from its scientific name. Slide 3 Carl Linnaeus, a Swedish professor, physician and naturalist devised the binomial system for classifying organisms into the hierarchical system that we use today. Evolution was not an accepted component of biology in 1758; hence there is no consideration of evolutionary relationships between organisms classified by this system. It is useful however, in that an organism classified by this system can be identified anywhere in the world and by anyone. Much of the classification was done on morphological characteristics and many organismal relationships have been confirmed after analyzing molecular traits. Slide 4 Classification of organisms into their highest taxonomic rank is an ongoing process. Linnaeus (1758) divided all known forms of life between two kingdoms, the plant and animal kingdoms. Since then, the five kingdom system was adopted in 1969 and has been the standard for the past twenty years or so. Recent evidence has divided the kingdom Monera (prokaryotes) into two separate kingdoms, the Bacteria and the Archaea resulting in the three-domain system. The organisms in the Archaea domain are prokaryotes that are adapted to live in extreme environments. The remaining four kingdoms in the five kingdom system are included in the Eukarya domain. Currently, there is much controversy over the classification of the Protista kingdom which includes an assortment of organisms. Sometime in the not too distant future the classification system will undergo another change as this kingdom is subdivided into more closely related groups. Slide 5 The binomial nomenclature, devised by Linnaeus, names organisms according to genus and species. In addition, he grouped similar species into hierarchical categories. Organisms are ranked by kingdom, phylum, class, order, family, genus and species. The kingdom classification is the most general category in which to place an organism; the species is more specific sometimes being further reduced into subspecies. Each of the subsequent groups (or taxa) becomes more specific, the organisms in each grouping having more characteristics in common. In this example, the two organisms classified are Dendroica fusca, the blackburnian warbler and Rosa gallica the moss rose. The genus name is always capitalized and both genus and species names should be italicized. Slide 6 Ancestral traits that show anatomical similarities between species are considered as homologous structures. For example, the forelimbs of humans, cats, bats, whales and birds all have similar skeletal structures even though these appendages have evolved different functions. Sometimes the trait being examined is not always obvious in the adult form of an organism therefore, early stages of development are often observed for homologies. On the other hand, a derived trait is different from its ancestral form in that similarities within a group are distinguished. Derived traits are often more difficult to classify since they change over the course of evolution. Also, identification of derived traits is often complicated by the occurrence of homoplastic traits i.e. traits that are similar in different individuals but they are not descended from a common ancestor. For example, convergent evolution produces organisms that evolve independently but have similar features. Some plants that evolved in desert habitats have features similar to cactus, i.e. succulent and prickly, but they do not belong to the cactus family. These organisms occupy similar habitats and are influenced by similar selective pressures producing similar phenotypes. Slide 7 Fossil records of extinct organisms are useful in distinguishing ancestral and derived traits. These records also provide an evolutionary time line of events on which to base the history of life. In extant or living organisms, structural traits such as morphology and development are an important resource in classifying organisms. Organisms possessing similar characteristics are arranged in the same group. The fossil record does not provide all the answers to the history of life, hence molecular structure has become a powerful tool in determining the relationship between organisms. Proteins such as cytochrome c and nucleic acids are particularly useful in identifying relationships. Mitochondrial DNA is often used to investigate the evolutionary relationships in animals whereas chloroplast DNA is often chosen to investigate the relationships between plants. Many different heritable traits are analyzed in order to classify organisms in relation to one another and in the reconstruction of phylogenetic trees. Slide 8 Systematists analyze evolutionary changes within a group of organisms and reconstruct phylogenetic trees showing the relationship of organisms to one another and their common ancestor. Phylogenetic trees show the sequential order of evolutionary change; in this example the oldest split is to the left of the tree, the youngest to the right. Each taxonomic unit is a monophyletic group (also known as a clade) containing all the descendants of a particular ancestor. Phylogenetic trees represent monophyletic groups nested within monophyletic groups. In this example mosses, ferns and flowering plants are each monophyletic groups but they all belong to the monophyletic group Plantae since they are all descended from a common ancestor believed to be a green algae. We will be investigating the classification of biological diversity in more detail in the next course BIO 116, “Organisms and Environments”.