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Human Tumor Explants are Better Predictors of Clinical Trial Outcome than Solid Tumor Cell Line Xenografts for the KSP Inhibitor ARRY-520 Michael J. Humphries, Richard Woessner, Cheryl Napier, Christine Lemieux, Duncan Walker and Shannon L. Winski Abstract # 1782 Array BioPharma Inc., Boulder, CO Available at www.arraybiopharma.com ARRY-520 in vivo activity: Solid tumor cell line xenografts and patient-derived explants Tumor Type Colon Solid tumor cell line xenograft Pancreas Ovarian Colon Patient-derived explant model Biliary ARRY-520 in vitro potency 1.6 nM median (mean 2.8 ± 4.4) Solid Tumor Cell EC50s • • In vitro viability: Cancer cell lines in log phase growth were treated with ARRY-520 for 72-96 hours. Cell viability was assessed using an Alamar Blue metabolic reagent. EC50 values are shown representing three or more independent experiments. Model Type Model Name ANBL-6 H929 JJN3 RPMI8226 KAS-6 Increasing the confidence of clinical success Multiple myeloma cell line xenograft Cell line xenograft models have limitations Cell Line • • • • CRC2598 CRC2598 Retain heterogeneity Retain microenvironment Retain architecture Genetic alterations reflect primary tumor • Reflect prior treatment All in vivo studies were performed in accordance with IACUC guidelines and in harmony with the Guide for Laboratory Animal Care and Use. -30 -40 -50 -60 -70 -80 -90 -100 KAS-6 Primary tumor -20 RPMI-8226 Primary tumor explants are closer to the patient -10 JJN3 Colo205 0 H929 Colo205 • Selected for growth in artificial environment • Lack complex microenvironment • Lack heterogeneity • Excessive genetic alterations multiple myeloma cell line xenografts Other* 3 5 4 5 3 3 11 • 2 patients experienced prolonged SD at 2.5 mg/m2 0 1) Malignant melanoma pt. • SD for 9.3 months • 5 prior therapies mg/m2/day, 2.5 Day 1 q 3 wks 3.3 mg/m2/day, Day 1 q 3 wks 1.25 mg/m2/day, Day 1, 2 q 2 wks 1.6 mg/m2/day, Day 1, 2 q 2 wks 1.6 mg/m2/day+ G-CSF Day 1, 2 q 2 wks -20 Not active 2) Ovarian cancer pt. • SD for 4.0 months • 10 prior therapies -40 0 2 4 6 8 10 • Goncalves et al. 2010. ASCO Abst. #2570 Time On Study (Months) -60 A2780 N87 HCT116 LoVo HT-29 Colo205 CRC13B2 BxPC3 LOX -100 PR • 32 patients were evaluable for response • Median of 6 prior therapies • 19% response rate (>MR) • 4 PR • 2 MR • 1 unconfirmed PR: (progressed with skeletal lesions) PR MR PR MR PR In vivo efficacy: All studies were performed in female SCID-Beige mice bearing growthstaged tumors. ARRY-520 was administered as an intraperitoneal bolus using the indicated dose and schedule. All regimens were welltolerated. Best anti-tumor responses are displayed as maximal tumor regression. Models exhibiting tumor regression were considered active. unconfirmed PR • Lonial, S. et al. 2011. ASH Abst. #2935 1.5 mg/m2/day+ G-CSF, D1, 2 q2wks On Study 0.0 GEJ / Esophagus 20 schedule Days 1, 2 Days 1, 2 Days 1, 2 Days 1, 2 Days 1, 2 Phase 2 study of ARRY-520 in patients with relapsed and refractory multiple myeloma: An open label, single arm, multicenter study was conducted to assess the safety and efficacy of ARRY-520. 32 evaluable patients were administered 1.5 mg/m2 ARRY-520 as an IV infusion on days 1, 2, q2w. Prophylactic G-CSF was administered starting D3 or 4 for 5-7 days. PANC Active ARRY-520 Phase 2: Relapsed and refractory multiple myeloma Dose (mg/kg) 12.5 12.5 12.5 12.5 12.5 CRC • 30 patients were evaluable for response by modified RECIST criteria Broad and potent activity of ARRY-520 in solid tumor cell line xenografts was not reflected in clinical trials Modest activity in solid tumor explants closely reflected the clinical activity of this drug ARRY-520 in vivo activity: Multiple myeloma cell line xenografts MEL 7 / 11 cell line xenografts displayed activity 1 / 8 patient-derived explants displayed activity 40 Hematologic Tumor Cell EC50s 1 .6 nM median (mean 1.8 ± 1.6) No evidence of enriched ARRY-520 sensitivity within specific tumor cell types NSCLC * Cholangiocarcinoma, ACUP, Mesothelioma, Ovarian, Thyroid, Sarcoma, mixed NSCLC/SCLC, Breast -80 In vivo efficacy: All studies were performed in female nude or SCID-Beige mice bearing growth-staged tumors. ARRY-520 was administered as an intraperitoneal bolus using the indicated dose and schedule. All regimens were well-tolerated. Best anti-tumor responses, either end of study tumor growth inhibition or maximal tumor regression, are displayed. Models exhibiting tumor regression were considered active. Head and Neck # of patients 60 U87 Cell Line RPMI8226 JJN3 H929 MV4-11 HL-60 K562 KU812 KG1 Molt3 Molt4 K562 ADR patient-derived explants solid tumor cell line xenografts CRC25B2 Tumor Type Multiple myeloma Multiple myeloma Multiple myeloma Leukemia Leukemia Leukemia Leukemia Leukemia Leukemia Leukemia Leukemia Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Days 1, 2 Days 1, 2 Days 1, 2 Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles Q4D x 3 cycles CRC2598 Cell Viability EC50, nM 2.5 1.4 1.6 1.2 1.6 1.4 1.1 2.1 1.1 2.1 4.2 20 27 20 20 20 15 27 20 20 25 20 20 20 20 20 20 20 20 20 Disease AMP38B9 Cell Viability EC50, nM 0.8 0.4 2 3.7 0.9 2.2 0.8 0.8 0.7 3.1 0.6 2.1 0.7 2 14 0.9 2.3 1.6 14 HT-29 HCT116 HCT-15 LoVo Colo205 BXPC3 A2780 R182 N87 U87 LOX CRC13B2 CRC18B2 CRC2598 CRC25B2 CRC25B3 CHL38B11 AMP38B9 PAN38B4 ARRY-520 Phase 1: Advanced solid malignancies 80 R182 Tumor Type Colon Colon Colon Colon Pancreas Pancreas Pancreas Breast Breast Breast Breast Prostate Prostate Ovarian Ovarian Cervical Epidermoid Melanoma Glioblastoma schedule CHL38B11 Cell Line HT-29 HCT-116 CRC13B2-AP2 HCT-15 PANC-1 BxPC3 MiaPaCa SKBR3 MDA-MB-468 MDA-MB-231 MCF7 DU145 PC-3 A2780 NCI/ADR-RES HeLa A431 LOX-IMVI U87-MG Pancreas Dose (mg/kg) CRC25B3 To probe the disparity between preclinical and clinical activity in solid tumors, we have retrospectively evaluated the ability of preclinical models to inform clinical success by comparing ARRY-520 clinical activity in solid tumors, to preclinical activity in cell line xenograft and patient-derived explants. Gastric Brain Melanoma ANBL-6 • ARRY-520 is a novel kinesin spindle protein inhibitor that has demonstrated significant preclinical activity in solid tumor and hematologic cell line models. In clinical studies, while ARRY-520 has demonstrated significant single-agent activity in multiple myeloma, activity in solid tumors has been modest. Tumor size in response to treatment • Model Name PAN38B4 Patient-derived explant models have significant potential to inform clinical direction by better reflecting the primary cancer in patients. These models have been treated with current standards of care, they have not undergone genetic drift or selection for growth in culture, and they retain the infrastructure of the tumor microenvironment. Model Type HCT-15 • Human tumor cell line xenografts have served as standard models for selecting and optimizing anticancer drugs. Despite wide use, cell line models are poor predictors of clinical activity of drugs, particularly cytotoxic agents. CRC18B2 • Tumor size in response to treatment Introduction 2.0 4.0 6.0 8.0 Off Study 10.0 Time on Study (Months) • Multiple myeloma xenografts are the most sensitive cell line models to ARRY-520 • Mirrors the clinical activity of this drug in heavily pretreated relapsed and refractory multiple myeloma patients Phase 1 study of ARRY-520 in patients with advanced solid malignancies: An open label, multi-arm, multicenter, dose escalation study was conducted to assess the safety, pharmacokinetics, and pharmacodynamics of ARRY-520. 34 patients were administered ARRY-520 as an IV infusion using the indicated doses and schedules. Summary • Preclinical activity in solid tumor cell lines and xenografts rarely correlates with clinical activity (Johnson et al. 2001. BJC. 84: 1424) • ARRY-520 has been investigated in preclinical and clinical settings, enabling an analysis of correlations between clinical and preclinical activity • Patient-derived solid tumor explants accurately predicted clinical outcome while solid tumor cell line xenografts did not • Multiple myeloma cell line xenografts reflected the potential clinical activity of ARRY-520 • Patient-derived explants better represent the primary cancer in patients and thus may allow for improved predictions of clinical activity. • Further work is required to understand the differences in solid tumor and hematological cell line models for predicting clinical outcome • Patient-derived solid tumor explants have potential to improve clinical decision making • Identify preferred indications/settings for clinical development • Model system to identify markers for patient response/resistance Thanks to the patients and their families