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Supplementary material for “Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18” Nature, V413, 848 1. 2. 3. 4. Functional classification of genes Pseudogenes detected in the S. typhi sequence Genes unique to S. typhi w.r.t. E. coli Genes unique to S. typhi w.r.t. S. typhimurium 1. Functional classification of genes Classification Scheme (from GenProtEC http://genprotec.mbl.edu/start) FC number 0.0.0 category Headings Superheading Unknown function Unknown proteins, no known homologs Open reading frames 0.0.1 0.0.2 Conserved in Escherichia coli Conserved in organism other than Escherichia coli 1.1.1 1.2.1 1.3.1 Chemotaxis and mobility Chromosome replication Chaperones Chemotaxis, motility Chromosome replication Folding and ushering proteins Cell processes Cell processes Cell processes 1.4.1 1.4.2 1.4.3 1.4.4 Cell killing Detoxification Drug/analog sensitivity Radiation sensitivity Protection responses Protection responses Protection responses Protection responses Cell processes Cell processes Cell processes Cell processes 1.5.0 Transport/binding proteins 1.5.01 1.5.02 1.5.03 1.5.42 1.5.43 1.5.04 1.5.05 1.5.06 1.5.07 1.5.08 1.5.09 1.5.10 1.5.11 1.5.12 1.5.13 1.5.14 1.5.15 1.5.16 1.5.17 1.5.18 1.5.19 1.5.20 1.5.21 1.5.22 1.5.23 1.5.24 ABC superfamily (atp_bind) ABC superfamily (membrane) ABC superfamily (peri_perm) APC family of transport protein ArAAP family Ars family BCCT superfamily CDF family CNT family CPA1 family CPA2 family DAACS family DASS family Dcu family DcuC FNT family FeoB family GPH family General PTS family GltS family GntP family MATE family MFS family MIP family Mechanism not stated Membrane-bound ATP synthase Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes 1.5.25 1.5.26 1.5.27 1.5.28 1.5.29 1.5.30 1.5.31 1.5.32 1.5.33 1.5.34 1.5.35 1.5.36 1.5.37 1.5.38 1.5.39 1.5.40 1.5.41 NCS1 family NCS2 family NhaA family NhaB family Outer membrane channel P-type ATPase family POT family PiT family RNDfamily SMR family SSS family STP family Sugar-specific PTS system SulP family Trk system Uptake of DNA VIC family Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Transport/binding proteins Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes Cell processes 1.6.1 1.6.2 1.6.3 Adaptations, atypical conditions Osmotic adaptation Fe storage Adaptation Adaptation Adaptation Cell processes Cell processes Cell processes 1.7.1 Cell division Cell division Cell processes 2.1.1 2.1.2 2.1.3 2.1.4 Degradation of DNA Degradation of RNA Degradation of polysaccharides Degradation of proteins, peptides, glyco Macromolecule degradation Macromolecule degradation Macromolecule degradation Macromolecule degradation Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism 2.2.01 2.2.05 Lipopolysaccharide 2.2.06 Lipoprotein 2.2.07 Phospholipids 2.2.08 Polysaccharides - (cytoplasmic) 2.2.09 Protein modufication 2.2.10 2.2.12 Proteins - translation and modification RNA synthesis, modification, DNA transcript'n tRNA Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule synthesis, modification Macromolecule metabolism 2.2.04 Amino acyl tRNA syn; tRNA modific'n Basic proteins - synthesis, modification DNA - replication, repair, restr./modific'n Glycoprotein 3.1.01 3.1.02 3.1.03 3.1.04 3.1.05 3.1.06 Alanine Arginine Asparagine Aspartate Chorismate Cysteine Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules 2.2.02 2.2.03 2.2.11 Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism 3.1.07 3.1.08 3.1.09 3.1.10 3.1.11 3.1.12 3.1.13 3.1.14 3.1.15 3.1.16 3.1.17 3.1.18 3.1.19 3.1.20 3.1.21 Glutamate Glutamine Glycine Histidine Isoleucine Leucine Lysine Methionine Phenylalanine Proline Serine Threonine Tryptophan Tyrosine Valine Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Amino acid biosynthesis Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules 3.2.01 3.2.02 3.2.03 3.2.04 3.2.05 3.2.06 3.2.07 3.2.08 3.2.09 3.2.10 3.2.11 3.2.12 3.2.13 3.2.14 3.2.15 Acyl carrier protein (ACP) Biotin Cobalamin Enterochelin Folic acid Heme, porphyrin Lipoate Menaquinone, ubiquinone Molybdopterin Pantothenate Pyridine nucleotide Pyridoxine Riboflavin Thiamin Thioredoxin, glutaredoxin, glutathione biotin carboxyl carrier protein (BCCP) Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Biosynthesis of cofactors, carriers Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Biosynthesis of cofactors, carriers Metabolism of small molecules 2'-Deoxyribonucleotide metabolism Amino sugars Entner-Douderoff Gluconeogenesis Glyoxylate bypass Incorporation metal ions Misc. glucose metabolism Misc. glycerol metabolism Non-oxidative branch, pentose pwy Nucleotide hydrolysis Nucleotide interconversions Oligosaccharides Phosphorus compounds Polyamine biosynthesis Pool, multipurpose conversions of intermed. met'm S-adenosyl methionine Salvage of nucleosides and nucleotides Sugar-nucleotide biosynthesis, conversions Sulfur metabolism amino acids other Central intermediary metabolism Metabolism of small molecules Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Central intermediary metabolism Central intermediary metabolism Metabolism of small molecules Metabolism of small molecules Central intermediary metabolism Metabolism of small molecules Central intermediary metabolism Central intermediary metabolism Central intermediary metabolism Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules 3.2.16 3.3.01 3.3.02 3.3.03 3.3.04 3.3.05 3.3.06 3.3.07 3.3.08 3.3.09 3.3.10 3.3.11 3.3.12 3.3.13 3.3.14 3.3.15 3.3.16 3.3.17 3.3.18 3.3.19 3.3.20 3.3.00 3.4.1 3.4.2 3.4.3 3.4.4 3.4.5 3.4.0 Amines Amino acids Carbon compounds Fatty acids Other ATP-proton motive force interconversion Degradation of small molecules Degradation of small molecules Degradation of small molecules Degradation of small molecules Degradation of small molecules Degradation of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules 3.5.1 3.5.2 3.5.3 3.5.4 3.5.5 3.5.6 3.5.7 3.5.8 Aerobic respiration Anaerobic respiration Electron transport Fermentation Glycolysis Oxidative branch, pentose pwy Pyruvate dehydrogenase TCA cycle Energy metabolism, carbon Energy metabolism, carbon Energy metabolism, carbon Energy metabolism, carbon Energy metabolism, carbon Energy metabolism, carbon Energy metabolism, carbon Energy metabolism, carbon Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules Metabolism of small molecules 3.6.1 Fatty acid and phosphatidic acid biosynth Fatty acid biosynthesis Metabolism of small molecules 3.7.1 Purine ribonucleotide biosynthesis Pyrimidine ribonucleotide biosynthesis Nucleotide biosynthesis Metabolism of small molecules Nucleotide biosynthesis Metabolism of small molecules 3.7.2 4.1.0 Periplasmic/exported/lipoproteins 4.1.1 4.1.2 4.1.3 4.1.4 Inner membrane Murein sacculus, peptidoglycan Outer membrane constituents Surface polysaccharides & antigens Surface structures Cell envelop Cell envelop Cell envelop Cell envelop Structural elements Structural elements Structural elements Structural elements Cell envelop Structural elements Ribosomal and stable RNAs Ribosomal proteins - synthesis, modificationRiboso Ribosomes - maturation and modification Ribosome constituents Ribosome constituents Structural elements Structural elements Ribosome constituents Structural elements Laterally acquirred elements Laterally acquirred elements Extrachromosomal Extrachromosomal 5.1.3 5.1.4 Colicin-related functions Phage-related functions and prophages Plasmid-related functions Transposon-related functions Laterally acquirred elements Laterally acquirred elements Extrachromosomal Extrachromosomal 6.1.1 Global regulatory functions Global regulatory functions Global functions 7.1.1 7.0.0 DNA sites, no gene product Not classified (included putative assignments) DNA sites Some information, but not classifiable Miscellaneous Miscellaneous 4.1.5 4.2.1 4.2.2 4.2.3 5.1.1 5.1.2 Classification of genes Gene Name Functio nal Clasifi cation Start End Function 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 1106421 118231 1224135 1252901 1314180 1319944 1320252 1323331 1343754 1350926 1363893 1377205 1412563 1435416 1456097 1467383 1473676 1575901 1702923 1758799 1760830 1764189 1764423 1776622 1777746 1778669 1779297 1779441 1780271 1780996 1782112 1782326 1786270 1804670 1831532 1873161 1875739 1877393 1877792 1882051 1883033 1886884 1933756 1987711 1996817 1996951 1999008 1999201 20004 2003441 1107359 118650 1225469 1253230 1315562 1320117 1320752 1323468 1345052 1351264 1365452 1377654 1413513 1436048 1456801 1468555 1475232 1576260 1703129 1759110 1761015 1764344 1764671 1777665 1777895 1778896 1779386 1779530 1780444 1781166 1782240 1782490 1786647 1805935 1831669 1873325 1876215 1877659 1877968 1882209 1883224 1887057 1933872 1987827 1996933 1997142 1999208 1999338 21155 2003596 hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein Unknown function STY1143 STY0117 STY1268 STY1293 STY1353 STY1359 STY1360 STY1367 STY1392 STY1398 STY1413 STY1426 STY1462 STY1482 STY1499 STY1509 STY1518 STY1648 STY1779a STY1842 STY1847 STY1853 STY1854 STY1869 STY1870 STY1873 STY1874a STY1874b STY1876 STY1877 STY1879 STY1880 STY1887 STY1911 STY1940 STY1986 STY1990 STY1993 STY1994 STY2001 STY2003 STY2006 STY2078 STY2135 STY2147 STY2148 STY2151 STY2152 STY0019 STY2156 pqaA STY2207 STY2209 STY2210 STY2212 STY2213 STY2214 STY2215 STY2217 STY0020 STY2345 STY2346 STY2347 STY2348 STY2352 STY2356 STY2357 STY2359 STY2362 STY2363 STY2368 STY2391 STY2403 STY2445 STY2457 STY2471 STY2559 STY2606 STY2671 STY2690 STY2712 STY2745 STY2746 STY2750 STY2780 STY2867 STY2905 STY2919 STY2929 STY2958 STY3031 STY3032 STY3034 STY3067 STY3068 STY3069 STY3070 STY3092 STY3093 STY3172 STY3173 STY3174 STY3188 STY3189 STY3191 STY3192 STY3208 STY3242 STY3294 STY3296 STY3309 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 2045298 2046987 2047166 2049539 2049689 2050009 2050392 2052806 21198 2183491 2183793 2184687 2185405 2189768 2191545 2191793 2193190 2194958 2195153 2199396 2222741 2236039 2275995 2288775 2302361 2394916 2441934 2508137 2522798 2545770 2584610 2584818 2587425 2638216 2736857 2787537 2799906 2804478 2834395 2900066 2900260 2903367 2928569 2929304 2930385 2931004 2956439 2957978 3042198 3042943 3043600 3054094 3055153 3056352 3057550 3073310 3107037 3140728 3142971 3156513 2045459 2047163 2047339 2049700 2050015 2050395 2050472 2052976 23060 2183793 2184677 2185394 2187516 2190217 2191823 2192488 2193492 2195056 2195350 2199512 2222848 2236236 2276117 2288873 2302621 2395068 2442302 2508376 2524075 2546000 2584747 2585078 2587583 2638884 2737414 2787656 2800031 2804654 2834508 2900251 2900586 2903663 2929294 2930368 2930987 2932539 2957269 2958334 3042956 3043455 3044676 3055077 3055644 3057005 3058080 3074149 3107228 3141252 3143237 3157568 hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein STY3312 STY3328 STY3329 STY3345 STY3645 STY3739a STY3765 STY3766 STY3773 STY3799 STY3801 STY3803 STY3814 STY3834 STY3844 STY3863 STY3864 STY3865 STY3866 STY3867 STY3869 STY3879 STY3948 STY3949 STY3950 STY3980 STY3991 STY0375 STY3998 STY0378 STY0385 STY0386 STY4074 STY4075 STY4108 STY4128 STY0391 STY4163 STY4165 STY0394 STY4175 STY4216 STY4246 STY4263 STY4338 STY0413 STY4408 STY4414 STY4435 STY4448 STY0045 STY4474 STY4500a STY4512 STY4513 STY4516 STY4686 STY4728a STY0450 STY4746 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 3161255 3173337 3173764 3189433 3503465 3591183 3628564 3630256 3638730 3664919 3665446 3666475 3677105 3693242 3703089 3720474 3721335 3721752 3722353 3723230 3724468 3734979 3816148 3817167 3818303 3846843 3856485 386344 3864375 389375 392809 393222 3932390 3932797 3968743 3990801 400126 4022831 4024116 402769 4035104 4083203 4111579 4127315 4217480 426228 4277151 4280699 4306483 4317425 43198 4360977 4393711 4404478 4404849 4406494 4548908 4591934 459365 4605780 3161968 3173747 3174138 3190416 3503893 3591356 3630120 3631380 3639392 3665116 3665592 3667515 3677500 3693487 3703463 3721322 3721619 3722360 3723228 3724471 3725346 3735203 3817170 3818306 3819430 3847928 3857498 386673 3864755 389923 393276 393377 3932773 3933465 3968949 3991733 400227 4022962 4025240 402993 4035235 4083319 4111713 4128076 4217704 426941 4277252 4281538 4306593 4317763 44181 4361123 4393977 4404861 4405046 4406712 4549030 4592185 459691 4605986 hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein (pseudogene) hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein (pseudogene) hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein (pseudogene) hypothetical protein hypothetical protein STY4781 STY4785 STY4786 STY4792 STY4810 STY4852 STY4853 STY4854 STY4857 STY4864 STY4878 STY4887 STY4912 STY0478 STY0059 STY0599 STY0615 STY0616 STY0705 STY0755 STY0758 STY0770 STY0774 STY0832 STY0861 STY0945 STY0947 STY0965 STY0970 STY0099 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 4640729 4643662 4644777 4650973 4670244 4716299 4716616 4717653 4720737 4727150 4740315 4750276 4773172 483689 58943 604191 614326 614791 701827 756978 758250 768519 772118 831359 854511 936885 937728 959804 964234 97351 4641031 4644780 4645517 4651143 4670399 4716538 4717491 4717928 4720994 4727302 4740458 4750578 4773351 483973 60145 604502 614766 615501 702207 757109 758990 768671 772363 831532 854651 937082 937934 959911 964431 97662 hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein (pseudogene) hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein 1051463 1052477 1057174 1057716 1072136 1079407 10841 1108783 1115065 1116294 1136364 1142423 1142881 1156543 1157928 1159941 1163401 1182681 1201437 1203322 1225509 1230346 1278795 1279375 1279968 1292665 1311666 1052164 1052755 1057719 1058825 1072741 1079724 11245 1109088 1115292 1116461 1137101 1142749 1143201 1156656 1158185 1160567 1164048 1182929 1202261 1203864 1226630 1230993 1279301 1279878 1280150 1292916 1312586 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein Conserved in Escherichia coli STY1076 STY1077 STY1080 STY1081 STY1094 STY1102 STY0011 STY1147 STY1154 STY1156 STY1173 STY1182 STY1183 STY1197 STY1199 STY1202 STY1206 STY1226a STY1248 STY1250 STY1269 STY1273 STY1321 STY1322 STY1323 STY1335 STY1351 yaaI yccD yceB 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 STY1354 STY1406 STY1420 STY1429 STY1433 STY1440 STY1449 STY1452 STY1461 STY1464 STY1470 STY1471 STY1472 STY1473 STY1496 STY1535 STY1548 STY1552 STY1562 STY0155 STY1679 STY1684 STY1732 STY0161 STY1751 STY1756 STY1766 STY1786 STY1804 STY1835 STY1849 STY1850 STY1926 STY1937 STY1938 STY1957 STY1968 STY1981 STY1982 STY1988 STY2083 STY2088 STY2105 STY0189 STY2144 STY2157 STY2192 STY2195 STY2252 STY2253 STY2263 STY2360 STY2377 STY2382 STY2387 STY2446 STY2456 STY0021 STY2517 STY2518 srfC srfB srfA yacA ydhZ yacF yebG yebB yacC yecH yecF yodD pduL pduM pduX yohN yehE yehS yejG 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 1316029 1357108 1371928 1382423 1384141 1391326 1400355 1402777 1412059 1414473 1419337 1421481 1424467 1426016 1453776 1489739 1500132 1504583 1511563 159617 1607046 1611708 1652636 165611 1670260 1676194 1689176 1707695 1723228 1755011 1762007 1762192 1818871 1830754 1831167 1846482 1857374 1870173 1871727 1875015 1936029 1940883 1957586 198171 1994161 2003593 2032030 2035229 2080580 2081209 2089486 2193988 2207838 2213488 2218812 2276572 2288135 23341 2352415 2353461 1316736 1357671 1372083 1383223 1384578 1392426 1401161 1403895 1412289 1414703 1421484 1424462 1425666 1426249 1453991 1490098 1500314 1504786 1512273 160045 1607282 1611947 1652848 166354 1671531 1676421 1689889 1707985 1724136 1755538 1762189 1762554 1819605 1831095 1831340 1848083 1857517 1871612 1871966 1875410 1936685 1941173 1958185 198518 1994400 2003817 2032257 2035474 2081212 2081700 2090388 2194134 2208152 2213769 2219279 2276976 2288479 24045 2353368 2353631 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (partial CDS) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein STY2542 STY0233 STY2611 STY2638 STY2648 STY2652 STY2653 STY2659 STY2662 STY2714 STY2720 STY0263 STY0264 STY2915 STY2924 STY2925 STY3064 STY3065 STY3066 STY3071 STY3080 STY0279 STY3108 STY0283 STY3178 STY3202 STY3203 STY3241 STY3262 STY3323 STY3332a STY3358 STY3360 STY3361 STY3381 STY3393 STY3400 STY3401 STY3402 STY3409 STY3411 STY3417 STY3418 STY3429 STY3451 STY3454 STY3456 STY3546a STY3561 STY3588 STY3603 STY3605 STY3609 STY3611 STY3617 STY3788 STY3847 STY3848 STY3862 STY0363 yaeH yfeC yfeD yfeN ypeB yffH yffB yaeP yaeQ ygaU ygaC ygbF yafD ygdH icc ygjO ygjQ yigP yigI yigB yigA yiiQ ygjN ygjM yafA 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 2376369 244326 2447067 2473697 2483942 2489963 2490327 2496555 2499389 2547296 2557647 277885 278283 2798046 2801705 2802217 2926652 2926948 2927865 2932897 2943509 296065 2974380 299977 3049366 3068542 3068924 3106596 3123111 3169843 3176418 3201025 3203384 3203965 3224502 3237661 3245856 3247078 3247727 3254294 3254997 3259244 3259521 3272367 3294153 3295898 3296699 3386511 3405637 3440842 3458035 3459465 3464088 3465703 3470496 3653687 3704925 3705233 3719625 372529 2376680 244712 2447342 2473939 2484268 2490325 2490719 2497316 2499616 2547871 2558003 278103 278828 2798495 2802055 2802543 2926945 2927865 2928569 2935104 2944180 296844 2975744 300699 3049965 3068889 3069190 3106727 3123830 3170130 3176567 3201339 3203965 3204792 3225803 3238305 3246992 3247575 3248419 3254599 3255296 3259408 3260831 3273512 3294788 3296215 3297223 3386714 3405879 3441447 3458502 3459923 3464804 3466410 3470858 3654283 3705236 3705679 3720317 373773 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein STY3870 STY3900 STY3934 STY4020 STY4107 STY4155 STY4178 STY4179 STY4180 STY4247 STY4289 STY4304 STY4307 STY4316 STY0406 STY4325 STY4329 STY4337 STY4342 STY4385 STY4393 STY4397 STY4409 STY4411 STY0415 STY4436 STY0422 STY0424 STY4509 STY0441 STY4692 STY4706 STY0449 STY4727 STY4729 STY4731 STY4732 STY4734 STY4736 STY4738 STY4743 STY4745 STY4764 STY4880 STY4888 STY4889 STY4905 STY4909 STY4916 STY4917 STY4922 STY4934 STY4948 STY0517 STY0053 STY0524 STY0542 STY0574 STY0578 STY0579 yieE yibL yiaF yhjS yhjQ yhhK yhgG yrfD yrfA yhfL yhfG yhfK yheV yhdN smg yrdB yaiB yaiA yaiE yajB yjeJ yjeN yajD yjfI yjfK yjfM yjfC yjfN yjfP yjfR sgaU yjfY ytfK yjiW yafM creA ybaJ ybaM 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 3725331 3761467 3797363 3881221 3968090 4013855 4037181 4038997 4039201 4111691 4163888 4184063 4185828 4194492 419711 4208489 4211189 4217086 4222304 4246732 4253794 4256233 4277287 4278739 428600 4306612 432918 434108 4400812 451090 4553896 4565301 458765 4590817 4592158 4593267 4593908 4596823 4597742 4599348 4603641 4605311 4621690 4741439 4750653 4751620 4766926 4769681 4775351 4776186 4782631 4795360 4807787 521239 52646 531785 549108 581149 586253 587512 3726065 3762918 3798118 3882162 3968452 4014565 4038752 4039200 4039953 4112074 4164124 4184842 4186229 4194662 420334 4208656 4213276 4217397 4222504 4247100 4254267 4256490 4277826 4279011 428866 4306824 433109 434392 4401498 451671 4554753 4565678 459112 4591221 4592841 4593905 4595071 4597146 4598491 4600412 4604495 4605586 4621962 4741834 4751609 4751823 4767162 4770361 4776214 4777736 4783116 4795833 4807927 521613 52861 531952 549902 581934 587500 588321 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein STY0648 STY0649 STY0704 STY0733 STY0880 STY0893 STY0909 STY0935 STY0948 STY0991 ybeL ybfE 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 0.0.1 650170 650760 701315 733795 871266 887419 901973 927559 938216 986132 650787 651995 701788 734088 872531 887802 902449 929217 938893 987025 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein Conserved in organism other than Escherichia coli STY0010 STY1082 STY1089 STY1090 STY1101 STY1103 STY1166 STY1167 STY1174 STY1184 STY1185 STY1193 STY1228 STY1229 STY1241 STY1283 STY1295 STY1296 STY1311 STY1313 STY1318 STY1320 STY1329 STY1330 STY1342 STY1343 STY1383 STY1399 STY1403 STY1412 STY1416 STY0139 STY0140 STY1484 STY1491a STY1547 STY1563 STY1569 STY1650 STY1656 STY1661 STY1667 STY1668 STY1676 STY1689 STY0016 STY0160 trpH yabB yabC ydgQ ydhD yacG 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 10092 1058924 1067533 1069479 1078946 1079782 1128367 1129554 1137125 1143268 1143764 1154032 1184161 1184943 1194941 1237565 1254184 1254751 1271018 1273201 1276435 1277897 1287419 1288308 1302709 1303024 1335976 1351292 1354289 1362270 1366390 141361 141821 1437212 1448758 1499485 1512377 1519345 1577621 1586436 1591397 1596454 1597077 1604502 1615107 16499 165410 10805 1061032 1069293 1069931 1079362 1080993 1129047 1130708 1137679 1143828 1145251 1155084 1184745 1185464 1195738 1237918 1254642 1255656 1271347 1273497 1276839 1278775 1288300 1288928 1303017 1304193 1336704 1351978 1355236 1363205 1366824 141819 142762 1438105 1449193 1500012 1512686 1519959 1579327 1587944 1591612 1597074 1597769 1605623 1615454 17032 165601 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein STY0162 STY1749 STY1753 STY1754 STY1757 STY1762 STY1764 STY1765 STY1787 STY1790 STY1796 STY1823 STY1824 STY1827 STY1831 STY1832 STY1843 STY1858 STY1859 STY1889 STY1928 STY1933 STY1941 STY1943 STY1950 STY1952 STY1953 STY1955 STY1978 STY1980 STY2005 STY0182 STY0184 STY2086 STY2098 STY2107 STY2111 STY2113 STY2114 STY2116 STY2120 STY2136 STY2140 STY2146 STY2174 STY2193 STY2201 STY2208 STY0197 STY2255 STY2264 STY2279 STY2338 STY2358 STY2366 STY2369 STY2383 STY2404 STY2448 STY2465 yacE yeaD ygbK yebE yebA yebC yecE yecG yecA yedF yedJ yadE pduO yegD mrp yohI yeiR yejL 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 166354 1668614 1672269 1673765 1676481 1685253 1687445 1687672 1708092 1710486 1716184 1742489 1742809 1744888 1749484 1751541 1759179 1767478 1768322 1786795 1820401 1825912 1832021 1833269 1839365 1842160 1842510 1844138 1865584 1867456 1885617 191791 193338 1939709 1950720 1958745 1962730 1964037 1964777 1966751 1971404 1987824 1991102 1995913 2018610 2032567 2039442 2045940 206675 2081988 2090422 2105221 2170454 2192559 2198158 2199596 2214047 2236307 2277896 2295048 166974 1669030 1673756 1674133 1676873 1686086 1687636 1689114 1708952 1711085 1716942 1742767 1743252 1745772 1751418 1752827 1759430 1768128 1768648 1787337 1821315 1827444 1832482 1833601 1840060 1842504 1842689 1844716 1866168 1870095 1886747 192153 194609 1940368 1952039 1959485 1963548 1964780 1965748 1967320 1972540 1988219 1991659 1996578 2018843 2033382 2040137 2046737 207898 2082998 2090757 2106045 2171806 2193059 2198574 2200495 2215156 2237245 2278882 2295275 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein STY2523 STY2524 STY2525 STY2530 STY0226 STY2538 STY2543 STY2565 STY2566 STY2576 STY2577 STY2580 STY2588 STY0232 STY2608 STY2610 STY2613 STY2618 STY2622 STY2683 STY2685 STY2723 STY2730 STY2732 STY2737 STY2749 STY2763a STY2770 STY2783 STY2787 STY2790 STY2814 STY2835 STY2839 STY2843 STY2846 STY2848 STY2850 STY2855 STY2869 STY2872 STY2873 STY0260 STY2916 STY2918 STY2928 STY2946 STY0270 STY2951 STY2982 STY0275 STY3039 STY3042 STY3047 STY3048 STY3053 STY3056 STY3057 STY3078 STY3083 yadR yfbB yaeG yfgB yfhJ yfhF yfhP yfhC yfiC yfiD yfiM yfiH yfjB yaeB ygaD ygbA yaeD ygbE 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 2358062 2359373 2360194 2365663 237127 2372462 2376729 2401589 2402166 2413430 2414041 2416206 2423668 243080 2442887 2444955 2447375 2451780 2456709 2517843 2519474 2559389 2566467 2568948 2573576 2586659 2615397 2622919 2641676 2644800 2646961 2678079 2697638 2701506 2704746 2709655 2711380 2720699 2725258 2738209 2741487 2741767 275810 2798595 2799245 2804050 2821885 282594 2828899 2858736 286542 2907509 2910026 2913358 2914796 2918791 2921045 2921547 2942231 2947562 2359258 2360020 2360619 2366562 237516 2373220 2377190 2402083 2402621 2413984 2414592 2417099 2424771 244237 2443543 2447015 2447924 2452331 2456993 2518742 2519923 2561404 2567606 2570135 2574301 2587348 2615618 2624085 2641876 2645123 2647455 2678630 2698375 2701889 2705426 2709978 2711835 2721430 2726166 2739087 2741762 2742243 276199 2798753 2799772 2804481 2822451 283301 2829396 2859080 287108 2908459 2910700 2914785 2915032 2919840 2921356 2921903 2943025 2948362 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein undefined product conserved hypothetical protein STY3097 STY3102 STY3104 STY3107 STY3120 STY3121 STY3125 STY3127 STY3136 STY3145 STY3159 STY3166 STY3168 STY3169 STY3186 STY3204 STY3206 STY3215 STY3216 STY3217 STY3221 STY3229 STY3237 STY3245 STY3247 STY3249 STY3250 STY3253 STY3255 STY3256 STY3258 STY3263 STY3264 STY3266 STY0298 STY3300 STY3302 STY3341 STY3342 STY3356 STY3362 STY3363 STY3366 STY3367 STY3375 STY3392 STY3413 STY3416 STY3446 STY3448 STY3452 STY3453 STY3458 STY3462 STY3469 STY3476 STY3487 STY3494 STY3495 STY3497 yqcC ygdE ygdD ygdB ygeA yraN yhbV 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 2964858 2970615 2971865 2973418 2988303 2989396 2992699 2994381 3011941 3018413 3031938 3038850 3040734 3041128 3052722 3069440 3071359 3083507 3084252 3084875 3089273 3096533 3102604 3110497 3111874 3113788 3114351 3116628 3117914 3118212 3120025 3123880 3124206 3126160 312685 3146822 3148033 3183611 3184202 3200413 3204817 3205236 3208434 3209659 3216384 3236659 3256004 3258519 3289558 3292494 3294919 3295417 3298444 3304064 3313654 3321965 3330734 3335488 3336495 3337638 2966000 2971064 2972194 2974266 2989403 2989791 2993142 2995187 3012348 3018943 3032645 3039332 3041006 3041988 3053522 3070420 3071670 3084091 3084581 3085423 3090019 3096958 3103362 3110994 3112605 3114351 3114767 3117332 3118204 3118805 3121032 3124206 3124925 3126435 314193 3147307 3148956 3184066 3186373 3200993 3205239 3205868 3209597 3210489 3216740 3237426 3256990 3259220 3290421 3292889 3295437 3295860 3299322 3304948 3314076 3322297 3331027 3336474 3337061 3338156 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein STY3502 STY3504 STY3506 STY3508 STY3512 STY3515 STY3518 STY3527 STY3542 STY3543 STY3544 STY3551 STY3557 STY3564 STY3575 STY3581 STY3597 STY3628 STY3650 STY3651 STY3707 STY3714 STY3716 STY3719 STY3782 STY0356 STY3791 STY3815 STY3821 STY0359 STY3831 STY3850 STY3857 STY3858 STY3878 STY3884 STY3885 STY3899 STY3923 STY3933 STY3947 STY3974 STY3975 STY3976 STY4007 STY4018 STY4059 STY4090 STY4117 STY4129 STY4150 STY4188 STY4192 STY4206 STY4210 STY4228 STY4233 STY4239 STY4267 STY4278 yhdE yhdG yigZ yigC yigL yifE yjaH yjaG yjaD yiiU yafJ yiiM yiiL yihZ yihS yihR yihI yihE yihD yieN yidA yidH yidG yidF yiaL yhjK yhjH yhhP yhhF glpE 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 3341334 3342702 3344134 3347443 3355140 3358962 3360298 3368465 3382461 3382828 3383154 3394908 3401700 3408993 3425869 3434427 3451801 3483851 3507263 3507601 3551123 3564849 3566012 3568430 3648077 365369 3656029 3677512 3682192 368371 3691531 3706680 3712481 3713726 3734345 3741156 3742219 3759977 3785633 3796779 3815134 3841645 3841982 3842341 3869661 3880242 3919913 3948736 3980242 3991757 4010780 4049730 4056066 4071684 4076233 4094749 4099246 4105054 4131687 4148814 3342188 3343334 3344787 3348372 3356243 3359429 3360977 3368869 3382724 3383094 3383426 3395501 3402704 3409838 3426483 3435905 3452601 3484930 3507604 3507963 3551461 3565541 3566602 3569203 3648316 366136 3656358 3678264 3682875 369510 3691845 3707117 3713722 3714478 3734860 3742142 3742488 3761473 3787390 3797363 3815946 3841992 3842344 3842871 3870046 3880985 3920776 3950019 3982197 3992221 4011067 4051703 4056833 4072526 4076991 4095327 4099491 4105650 4132382 4149140 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein STY4285 STY4288 STY4332 STY4334 STY4335 STY4344 STY4346 STY4347 STY4348 STY4349 STY4392 STY4394 STY4395 STY4413 STY4439 STY4446 STY0420 STY4447 STY4487 STY4488 STY4517 STY4537 STY4693 STY4713 STY0447 STY4714 STY4724 STY4728 STY4752 STY4757 STY0453 STY4759 STY4760 STY4770 STY4772 STY4776 STY4779 STY4780 STY4784 STY4789 STY4798 STY4806 STY4808 STY4855 STY4856 STY4858 STY4859 STY4861 STY4865 STY4886 STY4902 STY4906 STY4914 STY4915 STY4931 STY0474 STY0477 STY0480 STY0496 STY0497 yhfA yheU yheT slyX yheO yheN yheM yheL yrdD yrdC yjbN yaiI phnB phnA yjeK yjeF yjeE yjeB yjfJ ytfB ytfE ybaD ytfG ytfH ytfP yjga relE yjgF yjjX ybaX 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 4160566 4162727 4214265 4215686 4215901 4223376 4224909 4225631 4226017 4226381 4252698 4254294 4254841 4279819 4309084 4316649 431706 4317068 4374722 4375285 4407033 4422753 4555035 4574716 457512 4576235 4586962 4591236 4608620 4614741 461599 4616552 4617488 4630671 4632274 4637257 4640018 4640367 4642545 4647757 4659111 4667299 4668995 4717972 4719101 4721482 4722451 4724051 4727571 4750002 4764093 4767703 4773475 4774545 4793252 480008 483048 484300 503315 503820 4161141 4163653 4214669 4215904 4216780 4223594 4225631 4226017 4226373 4226668 4253822 4254836 4255413 4280682 4310082 4317065 432161 4317424 4375165 4375620 4407326 4423703 4556063 4576263 457877 4576696 4587387 4591934 4609255 4615403 462049 4617400 4617874 4631015 4633437 4637808 4640356 4640729 4643678 4648041 4659497 4667751 4669411 4718697 4720729 4722090 4723362 4724716 4728101 4750289 4764551 4768731 4774548 4775318 4793587 480517 483593 485454 503713 504515 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein STY0499 STY0005 STY0523 STY0529 STY0541 STY0583 STY0587 STY0621 STY0626 STY0630 STY0643 STY0645 STY0658 STY0662 STY0669 STY0687 STY0692 STY0693 STY0696 STY0714 STY0729 STY0751 STY0752 STY0753 STY0754 STY0765 STY0767 STY0768 STY0790 STY0817 STY0818 STY0825 STY0835 STY0848 STY0863 STY0881 STY0891 STY0900 STY0926 STY0929 STY0942 STY0009 STY0960 STY0975 STY0987 STY0989 STY0999 yaaA ybaB ybbF ybcJ ybdF ybdZ ybdB ybdQ citX ybeD ybeA ybeB ybgC ybhA ybhE ybhB ybhP ybiN yliG yaaH ycaJ ycaQ ycbL 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 0.0.2 506380 5114 530792 535731 548428 590950 594450 621896 623796 629366 644797 647561 657980 662201 668145 682792 688704 689175 691595 709510 729838 753589 754348 754998 755920 764172 766138 766975 787814 812795 813777 822856 833899 842149 855280 872793 885863 894194 917067 919323 934046 9376 952706 969211 983712 984996 998214 507198 5887 531715 536060 548907 591672 594662 622264 624914 629584 645210 647758 658462 662629 668564 683055 689171 689492 692236 709983 731241 754332 755004 755930 756654 765945 766971 768451 788218 813613 814772 823332 834807 842907 856201 873602 887188 895009 917390 920756 934366 9942 954049 970980 984944 985178 998861 conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein conserevd hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein 1.1.1 1.1.1 1.1.1 1.1.1 1.1.1 1.1.1 1.1.1 1.1.1 1.1.1 1.1.1 1358082 1976588 1977243 1977650 1978696 1979723 1981621 1982145 1984165 1985091 1359236 1977232 1977632 1978699 1979562 1981384 1982124 1984160 1985094 1985978 putative chemo-receptor protein chemotaxis protein CheZ chemotaxis protein CheY protein-glutamate methylesterase chemotaxis protein methyltransferase methyl-accepting chemotaxis protein II purine binding chemotaxis protein chemotaxis protein CheA motility protein B motility protein A Chemotaxis and mobility STY1408 STY2124 STY2125 STY2126 STY2127 STY2128 STY2129 STY2130 STY2131 STY2132 cheZ cheY cheB cheR tar cheW cheA motB motA STY3325 1.1.1 3170215 3171858 STY3394 STY3395 STY4234 cheM air, aer 1.1.1 1.1.1 1.1.1 3238302 3240258 4099515 3239870 3241778 4101158 STY4892 tsr 1.1.1 4754435 4756095 methyl-accepting chemotaxis protein (pseudogene) methyl-accepting chemotaxis protein II aerotaxis receptor protein methyl-accepting chemotaxis citrate transducer methyl-accepting chemotaxis protein (pseudogene) STY1691 STY1793 STY2115 STY2736 sodB katE cutC 1.4.2 1.4.2 1.4.2 1.4.2 1616737 1713175 1965952 2573190 1617318 1715427 1966731 2573549 STY0266 cutF 1.4.2 279279 279980 STY3760 STY3811 katG cpxP 1.4.2 1.4.2 3621018 3674335 3623198 3674835 STY3812 STY3813 STY3816 STY3937 STY0440 STY0609 STY0610 cpxR cpxA sodA thdF silA 1.4.2 1.4.2 1.4.2 1.4.2 1.4.2 1.4.2 1.4.2 3674986 3675681 3678271 3800574 450278 610081 610695 3675684 3677054 3678891 3801938 450880 610326 610835 STY0653 STY0655 ahpC ahpF 1.4.2 1.4.2 654566 655371 655129 656936 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 102467 1365999 1397817 1405735 1406735 1447243 1472365 1494534 1494880 1495343 173061 1766581 2245810 2288870 2366559 2368909 2553752 2814016 103288 1366337 1398335 1406748 1407331 1448730 1473606 1494911 1495314 1495558 173915 1767369 2246529 2290060 2368205 2369166 2556865 2814546 dimethyladenosine transferase putative multidrug transporter aminoglycoside 6'-N-acetyltransferase tellurite resistance protein TehA tellurite resistance protein TehB methyl viologen resistance protein SmvA putative multidrug efflux protein multiple antibiotic resistance protein MarR multiple antibiotic resistance protein MarA multiple antibiotic resistance protein MarB AmpE protein aminoglycoside-resistance protein vancomycin resistance protein bicyclomycin resistance protein melittin resistance protein PqaB polymyxin B resistance protein PmrD putative efflux pump putative transcriptional regulator 1.4.3 1.4.3 1.4.3 1.4.3 2814673 2815862 294737 3228068 2815845 2817400 295912 3228889 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 1.4.3 3249773 3413104 3413541 3847855 427110 522109 525281 526616 621146 676919 3250741 3413529 3416655 3849039 428309 525258 526474 527269 621799 677491 1.4.3 737499 737984 multidrug resistance protein A multidrug resistance protein B putative drug efflux protein bacitracin resistance protein (putative undecaprenol kinase) possible drug efflux protein acriflavin resistance protein E (pseudogene) acriflavin resistance protein F (pseudogene) multidrug resistance protein D possible efflux pump acriflavin resistance protein B acriflavin resistance protein A precursor potential acrAB operon repressor oxygen-insensitive NAD(P)H nitroreductase antimicrobial peptide resistance and lipid A acylation protein possible 5-nitroimidazole antibiotic Chromosome replication STY3903 STY3904 STY3905 STY4896 STY4897 STY4933 STY0577 mioC gidA gidB dnaC dnaT rob fdrA 1.2.1 1.2.1 1.2.1 1.2.1 1.2.1 1.2.1 1.2.1 3764614 3765436 3767428 4759357 4760097 4794279 584567 3765057 3767325 3768051 4760094 4760636 4795148 586231 MioC protein glucose inhibited division protein glucose inhibited division protein probable DNA replication protein primosomal protein I right origin-binding protein FdrA protein Chaperones STY0109 STY1148 STY0012 STY0013 STY1871 STY1881 STY2785 STY2786 STY2868 djlA cbpA dnaK dnaJ cspH hscA yfhE, hscB grpE 1.3.1 1.3.1 1.3.1 1.3.1 1.3.1 1.3.1 1.3.1 1.3.1 108222 1109088 11594 13596 1778004 1782934 2642225 2644088 109034 1110008 13510 14735 1778474 1783146 2644075 2644603 DnaJ-like protein curved DNA-binding protein DnaK protein (heat shock protein 70) DnaJ protein putative heat shock protein putative cold shock protein chaperone protein HscA chaperone protein HscB 1.3.1 2737496 2738086 4176228 4551268 4551605 4557993 4609433 4177106 4551561 4553251 4558310 4610095 STY4298 STY4689 STY4690 STY4698 STY4753 groES groEL sugE fklB 1.3.1 1.3.1 1.3.1 1.3.1 1.3.1 STY0531 htpG 1.3.1 536752 538650 heat shock protein GrpE (heat shock protein b25.3) (hsp24) heat shock protein GroES protein GroEL protein SugE protein probable FkbP-type peptidyl-prolyl cis-trans isomerase heat shock protein HtpG hlyE ecnA ecnB mukF mukE 1.4.1 1.4.1 1.4.1 1.4.1 1.4.1 1455055 4556731 4556973 988713 990043 1455972 4556865 4557119 990035 990720 haemolysin HlyE entericidin A precursor entericidin B precursor killing factor KicB KicA protein Cell killing STY1498 STY4695 STY4696 STY0994 STY0995 Detoxification STY1149 scsA 1.4.2 1110244 1110606 STY1150 scsB 1.4.2 1110655 1112541 STY1151 scsC 1.4.2 1112538 1113161 STY1152 scsD 1.4.2 1113151 1113657 STY1381 STY1682 tpx sodC 1.4.2 1.4.2 1334414 1610160 1334920 1610681 membrane protein, suppressor for coppersensitivity A membrane protein, suppressor for coppersensitivity B precursor secreted protein, suppressor for coppersensitivity C precursor secreted protein, suppressor for coppersensitivity D thiol peroxidase copper-zinc superoxide dismutase superoxide dismutase catalase HPII putative copper homeostasis protein putative arsenate reductase (arsenical pump modifier) copper homeostasis protein CutF precursor (lipoprotein nlpE) catalase (hydroperoxidase I) extracytoplasmic stress protein for proteinmediated toxicities two-component response regulatory protein two-component sensor kinase protein manganese superoxide dismutase thiophene and furan oxidation protein probable peroxidase possible copper-binding protein putative inner membrane proton/cation antiporter SilA (pseudogene) alkyl hydroperoxide reductase c22 protein alkyl hydroperoxide reductase F52A protein (subunit F) Drug/analog sensitivity STY0105 STY1415 STY1445 STY1455 STY1456 STY1491 STY1517 STY1540 STY1541 STY1542 STY0169 STY1857 STY2414 STY2458 STY2531 STY2534 STY2719 STY2939 STY2940 STY2941 STY0278 STY3384 STY3404 STY3569 STY3570 STY3981 STY0414 STY0519 STY0520 STY0521 STY0620 STY0677 STY0737 ksgA aac tehA tehB smvA marR marA marB ampE aadA sanA bcr pqaB pmrD acrD emrR, mprA emrA emrB bacA acrE acrF emrD acrB acrA acrR nfnB pagP, ybeG resistance Radiation sensitivity STY4597 STY4598 samB samA 1.4.4 1.4.4 4472479 4473753 4473753 4507730 UV protection protein UV protection protein (pseudogene) Transport/binding proteins STY1009 STY1141 STY1164 STY1165 STY1204 STY1244 STY0164 STY0165 STY0166 1005836 1104125 1126533 1127503 1161336 1197551 168274 169466 170861 1007269 1105501 1127390 1128030 1162544 1199726 169476 170851 171298 1.5.0 1.5.0 1.5.0 174957 1934303 1952055 176363 1935178 1953014 1.5.0 1990631 1990873 1.5.0 1.5.0 1.5.0 1.5.0 1992209 1993618 2102617 2222829 1992712 1994115 2103981 2223560 1.5.0 1.5.0 1.5.0 2240981 2261543 2274082 2242339 2262865 2275263 STY2501 1.5.0 2335636 2336961 STY2509 STY2520 STY2587 STY2589 STY0235 STY2637 STY2649 STY2731 STY2805 STY2820 STY2901 STY2938 STY2942 STY3421 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 2342844 2354466 2422315 2424773 244959 2472067 2484329 2567612 2662623 2683501 2784279 2812335 2817449 3260857 2344034 2355755 2423604 2426194 246261 2473458 2485570 2568880 2663954 2684697 2785289 2813519 2818819 3262124 1.5.0 1.5.0 3267539 3679220 3268869 3680202 1.5.0 1.5.0 1.5.0 3680221 3680729 3750269 3680736 3682036 3751696 1.5.0 1.5.0 3855157 393469 3856473 394722 STY0171 STY2080 STY2099 fhuE hofC hofB ppdD STY2139 yebL, znuA araH STY2141 STY2143 STY2277 STY2392 yecI ftnA yeeF yehW STY2409 STY2432 STY2443 STY3426 STY3817 STY3819 STY3820 STY3889 STY3990 STY0387 yeiO, setB pgtP mntH cadB tdcC yieO secB sapB 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 3952633 3963524 4025298 404257 406388 4242144 3953100 3966847 4026622 406347 407020 4243475 protein-export protein SecB putative autotransporter putative permease (pseudogene) ferrioxamine B receptor precursor RhtC-like transporter preprotein translocase subunit 1.5.0 4351271 4352620 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 436395 4381279 4549751 4563791 4600742 4735982 4788953 50447 513755 527388 574305 575648 578601 5966 633715 437567 4382616 4550992 4565293 4602172 4737223 4790620 51820 515041 530750 575552 577102 579899 7396 634851 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 63545 645392 64859 665734 66650 67048 679335 64846 647497 66634 667239 66889 68388 679538 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 698273 727357 847486 891987 952082 699226 728661 848481 892595 952696 1.5.0 1.5.0 1.5.00 1.5.00 960124 961490 1270134 1336894 961272 962911 1270970 1338507 STY1409 STY1519 STY1538 STY1574 1.5.00 1.5.00 1.5.00 1.5.00 1359382 1475409 1492316 1523846 1360365 1476695 1493506 1525135 STY1645 STY1670 STY1694 STY1697 STY1755 STY1791 STY1851 STY1863 STY1864 STY1865 STY1929 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1573199 1599005 1619853 1623395 1674560 1711222 1762727 1771432 1772234 1773208 1821412 1574581 1600510 1621058 1624768 1675906 1712613 1763365 1772244 1773211 1774842 1823145 putative xanthine/uracil permeases family protein AraJ protein (pseudogene) putative amino acid permease putative permease putative amino acid permease putative transport protein SgaT putative sugar transport protein conserved hypothetical ABC transporter putative transport protein probable ammonium transporter integral membrane protein AefA probable metabolite transport protein putative allantoin permease (pseudogene) putative permease protein putative amino-acid transport protein ferric enterobactin transport protein FepE (pseudogene) oxaloacetate decarboxylase beta chain carbon starvation protein A oxaloacetate decarboxylase alpha chain citrate carrier oxaloacetate decarboxylase gamma chain citrate-sodium symporter sec-independent protein translocase protein TatE probable permease citrate-proton symporter HlyD-family secretion protein putative permease protein outer membrane lipoprotein carrier protein precursor probable transport protein probable transport protein possible membrane transport protein periplasmic murein peptide-binding protein MppA putative membrane transport protein membrane transport protein putative membrane transport protein putative voltage gated chloride channel protein putative amino acid permease putative proton/oligopeptide symporter putative integral membrane transport protein hypothetical integral membrane protein putative transporter putative sodium:dicarboxylate symporter putative membrane transport protein putative inner membrane transport protein putative inner membrane transport protein putative substrate-binding transport protein putative Na+/H+ exchanger foxA prlA, secY STY4466 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 1.5.0 hpaX STY4094 STY4105 STY4166 STY0396 STY0397 STY4378 putative ion:amino acid symporter putative 4-hydroxyphenylacetate permease putative membrane transporter putative membrane transporter putative membrane transporter FhuE receptor precursor (pseudogene) protein transport protein HofC protein transport protein HofB prepilin peptidase dependent protein D precursor putative symporter putative cation transporter high-affinity zinc uptake system periplasmic binding protein L-arabinose transport system permease (pseudogene) ferritin-like protein ferritin putative amino acid transporter protein putative permease transmembrane component putative n-hydroxybenzoate transporter putative transport protein (pseudogene) sugar efflux transporter putative transmembrane transpot protein (pseudogene) putative transmembrane transport protein putative transport protein putative amino acid permease putative amino acid transporter probable sugar transporter (pseudogene) phosphoglycerate transporter protein manganese transport protein MntH putative permease probable cadaverine/lysine antiporter putative transmembrane transport protein putative cation transporter (pseudogene) putative transmembrane transport protein putative glycoporin conserved hypothetical transport protein (pseudogene) threonine/serine transporter (pseudogene) probable transport system periplasmic binding protein (pseudogene) possible membrane transport protein possible integral membrane transport protein putative transmembrane efflux protein (pseudogene) probable permease putative metabolite transport protein STY0428 STY4493 STY4688 STY4705 STY4739 STY4874 STY4928 STY0050 STY0507 STY0522 STY0568 STY0569 STY0572 STY0006 STY0632 araJ STY0063 STY0644 STY0064 STY0667 STY0065 STY0066 STY0682 oadB cstA oadA citT oadG citC tatE, ybeC STY0702 STY0727 STY0853 STY0898 STY0959 STY0966 STY0967 STY1310 STY1384 yjeH yjeM sgaT amtB ybbW yaaJ fepE citA ybjG lolA ycaD ycaM mppA ydhC ydhE STY1974 STY3036 STY3100 STY3106 STY3222 STY3252 STY3295 STY3313 STY3340 STY3460 STY3471 STY3531 STY3532 STY3533 STY3536 STY3584 STY3585 STY3586 STY3599 STY3600 STY3625 STY3738 STY3932 STY3936 STY3946 STY3978 STY4008 STY4046 STY4754 ygcZ syd pilT secG oadB oadA oadG tatC tatB tatA rhtB rhtC yifK secE yieG yidY dsdX cycA 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1860238 2903746 2968776 2972804 3090113 3115630 3141263 3161965 1861610 2904954 2970134 2973349 3090748 3116610 3142762 3163017 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 3182112 3300598 3316375 3372342 3373656 3375447 3377394 3437411 3438193 3438745 3453744 3183566 3301842 3316707 3373643 3375431 3375689 3378746 3438190 3438741 3438999 3454364 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 1.5.00 3454404 3480167 3588809 3795271 3799204 3813583 3844293 3870217 3906477 4610391 3455024 3481552 3589192 3796734 3800391 3814845 3845630 3871410 3907868 4611794 1061045 1213359 1221515 1062952 1214060 1222651 putative export protein (pseudogene) possible membrane transport protein probable glucarate transporter syd protein possible membrane transport protein Type II secretion, ATP-binding, protein possible amino acid transport protein possible ABC-transport protein, periplasmicbinding component possible membrane transport protein probable amino acid permease protein-export membrane protein oxaloacetate decarboxylase beta chain oxaloacetate decarboxylase alpha chain oxaloacetate decarboxylase gamma chain possible membrane transport protein sec-independent protein translocase protein sec-independent protein translocase protein sec-independent protein translocase protein homoserine/homoserine lactone efflux protein threonine efflux protein probable amino acid permease preprotein translocase SecE subunit putative membrane transport protein putative membrane transport protein putative membrane transport protein DsdX permease putative inner membrane transport protein putative purine permease D-serine/D-alanine/glycine transporter STY2223 cbiO 1.5.01 2057930 2058745 STY2393 STY2422 yehX mglA 1.5.01 1.5.01 2223544 2251323 2224491 2252841 STY2455 yejF 1.5.01 2286542 2288131 STY0219 fhuC 1.5.01 230387 231184 STY2480 STY2489 ccmA1 yojI 1.5.01 1.5.01 2309996 2317713 2310613 2319356 STY2581 STY2678 hisP cysA 1.5.01 1.5.01 2417151 2512849 2417927 2513943 STY2934 proV 1.5.01 2808847 2810048 STY0274 abc 1.5.01 285321 286352 STY3232 1.5.01 3098252 3098935 STY3233 1.5.01 3098929 3099585 STY3492 1.5.01 3333472 3334284 STY3498 1.5.01 3338163 3338888 STY3796 1.5.01 3660392 3661927 STY3896 STY3929 STY3959 STY4171 rbsA pstB ccmA2 dppD 1.5.01 1.5.01 1.5.01 1.5.01 3755612 3792955 3830135 4030884 3757117 3793728 3830752 4031867 ABC transporter ATP-binding protein ABC transporter ATP-binding subunit spermidine/putrescine transport ATPbinding protein PotA (ABC superfamily) hypothetical ABC transporter oligopeptide transport ATP-binding protein OppD oligopeptide transport ATP-binding protein OppF peptide transport system ATP-binding protein SapF peptide transport system ATP-binding protein SapD ABC transporter ATP-binding subunit putative ABC transporter ATP/GTP-binding protein putative ABC transport ATP-binding subunit vitamin B12 ABC transport ATP-binding protein putative ABC transport ATP-binding subunit putative ABC transport ATP-binding protein high-affinity zinc uptake system ATPbinding protein putative ABC-transport ATP-binding protein hypothetical ABC transporter ATP-binding protein STY4172 dppF 1.5.01 4031864 4032877 1.5.01 4090292 4093033 ABC superfamily (atp_bind) STY1083 STY1258 STY1266 potA 1.5.01 1.5.01 1.5.01 STY0123 STY1308 yabJ oppD 1.5.01 1.5.01 124825 1268078 125532 1269085 STY1309 oppF 1.5.01 1269082 1270086 STY1355 sapF 1.5.01 1316752 1317558 STY1356 sapD 1.5.01 1317560 1318552 1.5.01 1.5.01 1387631 1522562 1388362 1523710 btuD 1.5.01 1.5.01 1671506 1690744 1672252 1691493 znuC 1.5.01 1.5.01 1.5.01 1770057 1770641 1953078 1770647 1771438 1953833 yadG 1.5.01 1.5.01 2004839 204369 2005591 205295 STY1436 STY1573 STY1752 STY1768 STY1861 STY1862 STY2100 STY2159 STY0194 STY4224 STY4251 livG 1.5.01 4115862 4116629 STY4252 livF 1.5.01 4116631 4117344 STY4257 ugpC 1.5.01 4121171 4122241 STY4339 yheS 1.5.01 4217765 4219672 STY4426 malK 1.5.01 4296002 4297111 STY0467 phnT 1.5.01 473232 474341 STY0503 mdlA, mdlA mdlB 1.5.01 509626 511398 1.5.01 511391 513172 1.5.01 555710 556387 STY0504 STY0548 STY0553 ybbA 1.5.01 559663 560349 STY0559 STY0634 sfbB fepC 1.5.01 1.5.01 565203 634904 566219 635698 putative cobalt transport ATP-binding protein CbiO ABC transporter ATP-binding protein galactoside transport ATP-binding protein MglA (pseudogene) putative ABC-transporter ATP-binding protein ferrichrome transport ATP-binding protein FhuC heme exporter protein A1 putative ABC transporter ATP-binding protein histidine transport ATP-binding protein sulphate transport ATP-binding protein CysA glycine betaine/L-proline transport ATPbinding protein (pseudogene) putative ABC transporter ATP-binding protein possible ABC-transport protein, ATPbinding component possible ABC-transport protein, ATPbinding component possible ABC-transport protein, ATPbinding component probable ABC transport protein, ATPbinding component putative ABC transporter ATP-binding protein high affinity ribose transport protein phosphate transport ATP-binding protein heme exporter protein A2 dipeptide transport ATP-binding protein DppD dipeptide transport ATP-binding protein DppF hypothetical ABC transporter ATP-binding protein high-affinity branched-chain amino acid transport ATP-binding protein high-affinity branched-chain amino acid transport ATP-binding protein sn-Glycerol-3-phosphate transport ATPbinding protein probable ABC transporter ATP-binding protein maltose/maltodextrin transport ATP-binding protein probable ATP-binding component of 2aminoethylphosphonate transporter putative ABC transporter ATP-binding membrane protein putative ABC transporter ATP-binding membrane protein putative ABC transporter ATP-binding protein hypothetical ABC transporter ATP-binding protein ABC transporter ATP-binding protein ferric enterobactin transport ATP-binding STY0707 gltL 1.5.01 703291 704016 STY0803 STY0811 modF 1.5.01 1.5.01 800092 807495 800868 808970 STY0816 modC 1.5.01 811736 812794 STY0852 ybhF 1.5.01 845757 847493 STY0866 glnQ 1.5.01 858539 859261 STY0879 STY0887 ybiT 1.5.01 1.5.01 869549 880435 871144 882306 STY0911 potG 1.5.01 903998 905131 STY0924 STY0938 STY0954 STY0955 STY0985 artP ybjZ cydC cydD msbA 1.5.01 1.5.01 1.5.01 1.5.01 1.5.01 915467 931425 942163 943885 980946 916195 933371 943884 945651 982694 protein FepC glutamate/aspartate transport ATP-binding protein GltL ABC transporter ATP-binding protein putative molybdenum transport ATP-binding protein ModF (photorepair protein PhrA) molybdenum transport ATP-binding protein ModC hypothetical ABC transporter ATP-binding protein glutamine transport ATP-binding protein GlnQ ABC transporter ATP-binding protein hypothetical ABC transporter ATP-binding protein putrescine transport ATP-binding protein PotG arginine transport ATP-binding protein ArtP conserved hypothetical ABC transporter transport ATP-binding protein CydC transport ATP-binding protein CydD probable transport ATP-binding protein MsbA ABC superfamily (membrane) STY1257 STY1259 STY1263 potC 1.5.02 1.5.02 1.5.02 1212056 1214060 1218234 1213366 1215304 1219013 STY1265 potB 1.5.02 1220668 1221531 STY0124 yabK 1.5.02 125516 127126 STY1305 oppB 1.5.02 1266224 1267144 STY1306 oppC 1.5.02 1267159 1268066 STY1357 sapC 1.5.02 1318552 1319442 STY1368 sapB 1.5.02 1323500 1324465 1.5.02 1.5.02 1.5.02 1.5.02 1520264 1521915 1692136 1953830 1520974 1522562 1693116 1954615 1.5.02 1.5.02 1.5.02 1.5.02 2005588 205292 2058754 2224484 2006256 206062 2059431 2225653 STY1570 STY1572 STY1770 STY2101 STY2160 STY0195 STY2224 STY2394 btuC yebI, znuB yecS yadH cbiQ yehY STY2421 mglC 1.5.02 2250297 2251307 STY2453 yejB 1.5.02 2284421 2285515 STY2454 yejE 1.5.02 2285515 2286540 STY2478 STY2479 ccmC1 ccmB1 1.5.02 1.5.02 2308551 2309340 2309288 2309999 ABC transporter integral membrane subunit ABC transporter integral membrane subunit spermidine/putrescine transport system permease protein PotC spermidine/putrescine transport system permease protein PotB putative ABC transporter integral membrane protein oligopeptide transport system permease protein OppB oligopeptide transport system permease protein OppC (pseudogene) peptide transport system permease protein SapC peptide transport system permease protein SapB putative ABC transporter membrane protein putative ABC transporter membrane protein vitamin B12 transport system permease high-affinity zinc uptake system membrane protein putative ABC transporter membrane protein ABC transporter integral membrane protein putative cobalt transport protein CbiQ putative permease transmembrane component galactoside transport system permease protein MglC putative binding-protein-dependent transporter putative binding-protein-dependent transporter heme exporter protein C1 heme exporter protein B1 STY0221 STY2582 STY2583 STY2679 fhuB hisM hisQ cysW 1.5.02 1.5.02 1.5.02 1.5.02 232071 2417938 2418642 2513933 234128 2418645 2419328 2514808 STY2680 cysU 1.5.02 2514808 2515641 STY2936 proW 1.5.02 2810041 2811105 STY0273 STY3794 yaeE ydeZ 1.5.02 1.5.02 284675 3658357 285313 3659358 STY3795 STY3895 STY3927 STY3928 STY3960 STY3961 STY4169 rbsC pstC pstA ccmB2 ccmC2 dppB 1.5.02 1.5.02 1.5.02 1.5.02 1.5.02 1.5.02 1.5.02 3659355 3754641 3791019 3791978 3830752 3831451 4028942 3660398 3755606 3791978 3792868 3831408 3832197 4029961 STY4170 dppC 1.5.02 4029971 4030873 1.5.02 4093033 4094257 STY4225 STY4249 livH 1.5.02 4113665 4114591 STY4250 livM 1.5.02 4114588 4115865 STY4255 ugpA 1.5.02 4119439 4120326 STY4256 ugpE 1.5.02 4120323 4121168 STY0408 sbmA 1.5.02 421872 423092 STY4423 STY4424 STY0465 malG malF phnV 1.5.02 1.5.02 1.5.02 4291869 4292774 471575 4292759 4294318 472366 STY0466 phnU 1.5.02 472360 473229 STY0560 STY0635 STY0636 STY0708 sfbC fepG fepD gltK 1.5.02 1.5.02 1.5.02 1.5.02 566212 635695 636684 704016 566871 636684 637691 704690 STY0709 gltJ 1.5.02 704690 705430 STY0802 STY0815 modB 1.5.02 1.5.02 799013 811044 800092 811733 STY0889 yliC 1.5.02 883938 884858 STY0890 yliD 1.5.02 884861 885772 STY0912 potH 1.5.02 905141 906094 STY0913 potI 1.5.02 906091 906936 STY0922 artQ 1.5.02 913995 914711 ferrichrome transport protein FhuB precursor histidine transport system permease histidine transport system permease protein sulphate transport system permease protein CysW sulphate transport system permease protein CysT glycine betaine/L-proline transport system permease protein P putative ABC transporter permease protein putative ABC transporter, membrane component putative ABC transporter permease protein high affinity ribose transport protein phosphate transport system permease protein phosphate transport system permease protein heme exporter protein B2 heme exporter protein C2 dipeptide transport system permease protein DppB dipeptide transport system permease protein DppC hypothetical ABC transporter membrane protein (pseudogene) high-affinity branched-chain amino acid transport system permease protein high-affinity branched-chain amino acid transport system permease protein glycerol-3-phosphate transport system permease protein sn-Glycerol-3-phosphate transport system permease protein probale ABC-transporter inner membrane protein SbmA, SbmA protein maltose transport inner membrane protein maltose transport inner membrane protein probable membrane component of 2aminoethylphosphonate transporter probable membrane component of 2aminoethylphosphonate transporter ABC transporter integral membrane protein ferric enterobactin transport protein FepG ferric enterobactin transport protein FepD glutamate/aspartate transport system permease protein GltK glutamate/aspartate transport system permease protein GltJ ABC transporter permease (FecCD_family) molybdenum transport system permease protein ModB hypothetical ABC transporter permease protein hypothetical ABC transporter permease protein putrescine transport system permease protein PotH putrescine transport system permease protein PotI arginine transport system permease protein ArtQ CPA1 family ABC superfamily (peri_perm) STY4467 STY1262 potD 1.5.03 1217163 1218209 STY1304 oppA 1.5.03 1264354 1266102 STY0127 yabN 1.5.03 128263 129921 STY1369 sapA 1.5.03 1324462 1326111 1.5.03 1521003 1521905 1.5.03 2007417 2008217 STY2424 fliY, fliY mglB 1.5.03 2252975 2253973 STY2452 yejA 1.5.03 2282606 2284411 STY2477 STY0228 STY2584 STY2681 STY2937 ccmD1 btuF hisJ cysP proX 1.5.03 1.5.03 1.5.03 1.5.03 1.5.03 2308342 238277 2419511 2515641 2811175 2308554 239077 2420293 2516657 2812170 1.5.03 3657306 3658328 STY1571 STY2162 STY3793 STY3926 STY3962 STY4168 pstS ccmD2 dppA 1.5.03 1.5.03 1.5.03 3789843 3832194 4027178 3790883 3832406 4028785 STY4254 ugpB 1.5.03 4118018 4119334 STY4425 STY0468 malE phnS 1.5.03 1.5.03 4294450 474347 4295640 475360 STY0638 fepB 1.5.03 639109 640065 STY0710 ybeJ 1.5.03 705590 706516 STY0814 modA 1.5.03 810271 811044 STY0888 yliB 1.5.03 882339 883877 STY0910 potF 1.5.03 902798 903910 spermidine/putrescine-binding periplasmic protein precursor periplasmic oligopeptide-binding protein precursor putative ABC transporter periplasmic solute binding protein peptide transport periplasmic protein SapA precursor putative ABC transporter periplasmic binding protein cystine-binding periplasmic protein precursor D-galactose-binding periplasmic protein precursor putative transport system periplasmic binding protein heme exporter protein D1 cobalamin periplasmic binding protein histidine-binding periplasmic protein thiosulphate-binding protein precursor glycine betaine-binding periplasmic protein precursor putative ABC transport protein, solutebinding component periplasmic phosphate-binding protein heme exporter protein D2 periplasmic dipeptide transport protein precursor glycerol-3-phosphate-binding periplasmic protein periplasmic maltose-binding protein probable periplasmic binding component of 2-aminoethylphosphonate transporter ferrienterobactin-binding periplasmic protein precursor ABC transporter periplasmic binding protein (glutamate/aspartate?) molybdate-binding periplasmic protein precursor putative ABC transporter periplasmic binding protein putrescine-binding periplasmic protein precursor Ars family STY0544 ybaR 1.5.04 551169 553670 copper-transporting ATPase CDF family STY3810 STY0799 yiiP ybgR 1.5.06 1.5.06 3673291 796053 3674187 796991 putative transmembrane efflux protein probable cation transport protein CNT family STY2650 1.5.08 4352725 4354416 putative sodium/hydrogen exchanger family protein 1.5.09 1.5.09 543376 98592 545052 100454 putative transport protein glutathione-regulated potassium-efflux system protein KefC dctA gltP 1.5.10 1.5.10 1.5.10 3250996 4051861 4368150 3252240 4053147 4369460 probable membrane transport protein C4-dicarboxylate transport protein proton glutamate symport protein dcuB dcuA 1.5.12 1.5.12 4392224 4546023 4393564 4547324 anaerobic C4-dicarboxylate transporter anaerobic C4-dicarboxylate transporter dcuC 1.5.13 675155 676540 C4-dicarboxylate anaerobic carrier nirC focA 1.5.14 1.5.14 4202176 967949 4202985 968806 putative nitrite transporter probable formate transporter (formate channel) feoB 1.5.15 4164137 4166455 ferrous iron transport protein B STY0125 tbpA 1.5.16 127102 128085 STY3860 STY3861 STY4043 STY4498 yihP 1.5.16 1.5.16 1.5.16 1.5.16 3716708 3718136 3900832 4388954 3718090 3719557 3902214 4390384 thiamine-binding periplasmic protein precursor putative membrane permease putative membrane permease sodium:galactoside family symporter melibiose carrier protein CPA2 family STY0536 STY0101 ybaL kefC DAACS family STY3405 STY4189 STY4482 Dcu family STY4500 STY4684 DcuC STY0676 FNT family STY4320 STY0974 FeoB family STY4290 GPH family yicJ melB General PTS family STY1657 malX 1.5.17 1588113 1588283 STY3144 ptsP 1.5.17 3016154 3018400 STY3437 1.5.17 3281569 3282996 STY3438 1.5.17 3282983 3283789 1.5.18 3908095 3909300 PTS system, maltose and glucose-specific IIABC component (pseudogene) phosphoenolpyruvate-protein phosphotransferase PTS system, sugar phosphotransferase enzyme IIBC component PTS-transport family phosphoryl transfer protein GltS family nupC 1.5.07 2485913 2487115 nucleoside permease NupC STY4047 gltS glutamate permease GntP family STY3038 STY3823 STY4284 rhaT gntT 1.5.19 1.5.19 1.5.19 2906016 3683494 4158873 2907512 3684528 4160189 possible permease L rhamnose-proton symporter high-affinity gluconate transporter dinF 1.5.20 4305158 4306483 putative DNA-damage-inducible membrane protein 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1131729 1151523 1444944 1506463 1528279 2179688 2201854 2439613 2656457 2709975 2982410 3032758 3109024 1133009 1152737 1446332 1507842 1529532 2181100 2203125 2440791 2657596 2711276 2983726 3034173 3110418 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 1.5.21 3127850 3150313 3361024 3955101 4059043 4376088 480564 3129106 3151617 3362514 3956411 4060365 4377590 481928 1.5.21 1.5.21 1.5.21 490748 545267 91996 492223 546487 93159 putative transporter putative membrane transport protein nitrite extrusion protein putative membrane transport protein putative membrane transport protein putative transporter protein putative nucleoside permease putative transmembrane transporter putative 3-phenylpropionate permease alpha-ketoglutarate permease L-fucose permease L-arabinose isomerase galactose-proton symport (galactose transporter) nucleoside permease hexuronate transporter putative sialic acid transporter probable glucarate transporter (pseudogene) hypothetical metabolite transport protein ProP, putative proline/betaine transporter hpothetical major facilitator family transport protein AmpG protein fosmidomycin resistance protein putative metabolite transport protein STY2623 fadL 1.5.23 2457358 2458671 STY2657 STY2665 STY2738 STY2913 xapB cysZ uraA gabP 1.5.23 1.5.23 1.5.23 1.5.23 2494155 2502914 2574372 2795905 2495411 2503675 2575661 2797305 STY3331 STY3332 STY3503 STY3607 STY3897 STY3898 STY4104 exbD exbB ptsO corA rbsD kup lldP, lctP pitA 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 3175259 3175691 3342185 3460368 3757125 3757761 3961570 3175684 3176425 3342457 3461318 3757544 3759629 3963225 1.5.23 4080174 4081670 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 4110398 4112496 4134413 4166474 4220489 4111492 4113605 4135753 4166701 4222294 STY4427 STY0435 livJ livK gntU feoA kefB, trkB lamB brnQ 1.5.23 1.5.23 4297201 444752 4298559 446071 STY0445 STY0446 STY4711 secD secF artJ 1.5.23 1.5.23 1.5.23 454536 456394 4571986 456383 457365 4572705 STY0048 STY0617 STY0628 STY0629 STY0745 STY0747 STY0798 STY0812 nhaR pheP fepA fes kdpC kdpA pnuC modE 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 47414 615827 625677 628121 745574 747897 795337 809038 48313 617221 627932 629335 746161 749576 796056 809826 STY0867 glnP 1.5.23 859258 859917 STY0868 glnH 1.5.23 860063 860809 STY0899 STY0920 mdfA artJ 1.5.23 1.5.23 892908 912359 894140 913090 STY0921 artM 1.5.23 913327 913995 STY0923 artI 1.5.23 914718 915449 codB 1.5.25 3356360 3357613 cytosine permease STY1935 nhaB 1.5.27 1828430 1829974 STY0047 nhaA 1.5.27 46186 47352 regulator of intracellular pH; Na+/H+ antiporter Na(+)/H(+) antiporter 1 MATE family STY4434 MFS family STY1169 STY1191 STY1489 STY1554 STY1579 STY2342 STY2371 STY2603 STY2801 STY2847 STY3115 STY3160 STY3244 yceE narU yegB hcaT kgtP fucP araE galP STY3268 STY3305 STY3519 STY4097 STY4194 STY4489 STY0475 nupG exuT nanT STY0486 STY0538 STY0089 ampG fsr yaaU yhjE proP MIP family STY2242 STY3783 pduF glpF 1.5.22 1.5.22 2072104 3648715 2072898 3649560 propanediol diffusion facilitator glycerol uptake facilitator protein Mechanism not stated STY1281 STY1282 STY1287 STY1314 STY1378 STY1481 STY0156 STY1769 chaA chaB narK tonB tyrR ansP secA btuE 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 1.5.23 1235888 1237255 1242299 1273721 1332068 1433410 160107 1691493 1236988 1237485 1243696 1274449 1333609 1434903 162812 1692044 STY0220 fhuD 1.5.23 231184 232074 STY2512 STY2585 glpT argT 1.5.23 1.5.23 2346265 2420531 2347623 2421313 putative calcium/proton antiporter cation transport regulator ChaB nitrite extrusion protein (nitrite facilitator) TonB protein transcriptional regulatory protein TyrR L-asparagine permease preprotein translocase SecA subunit putative glutathione peroxidase/vitamin B12 transport periplasmic protein BtuE ferrichrome-binding periplasmic protein precursor glycerol-3-phosphatase transporter lysine-arginine-ornithine-binding periplasmic protein precursor STY4214 STY4244 STY4248 STY4270 STY4291 STY4341 long-chain fatty acid transport protein precursor xanthosine permease putative sulfate transport protein CysZ uracil permease (uracil transporter) GabA permease (4-amino butyrate transport carrier) biopolymer transport ExbD protein biopolymer transport ExbB protein phosphocarrier protein (nitrogen related hpr) magnesium and cobalt transport protein high affinity ribose transport protein RbsD membrane transport protein L-lactate permease putative low-affinity inorganic phosphate transporter amino acid-binding protein (pseudogene) leucine-specific binding protein low-affinity gluconate transporter putative ferrous iron transport protein glutathione-regulated potassium-efflux system protein (K(+)/H(+)antiporter) maltoporin precursor branched chain amino acid transport system II carrier protein protein-export membrane protein SecD protein-export membrane protein SecF probable arginine-binding periplasmic protein transcriptional activator protein NhaR phenylalanine-specific permease ferrienterobactin receptor precursor enterochelin esterase potassium-transporting ATPase C chain potassium-transporting ATPase A chain pnuC protein putative molybdenum transport protein ModE glutamine transport system permease protein GlnP glutamine-binding periplasmic protein precursor multidrug translocase MdfA arginine-binding periplasmic protein 2 precursor arginine transport system permease protein ArtM arginine-binding periplasmic protein 1 precursor NCS1 family STY3513 NhaA family Outer membrane channel STY1649 STY2203 STY0451 ompS1 tsx 1.5.29 1.5.29 1.5.29 1576317 2041179 459745 1577468 2042363 460608 outer membrane protein outer membrane protein S1 nucleoside-specific channel-forming protein tsx precursor P-type ATPase family STY4235 STY4796 STY0746 mgtA kdpB 1.5.30 1.5.30 1.5.30 4101355 4655766 746167 4103553 4658474 747876 heavy metal-transporting ATPase Mg(2+) transport ATPase, P-type potassium-transporting ATPase B chain POT family STY2807 STY0637 STY0750 ybdA 1.5.31 1.5.31 1.5.31 2666237 637802 751779 2667697 639046 753260 putative transmembrane transport protein hypothetical membrane protein p43 PTR2-family transport protein RNDfamily STY2339 STY2340 STY2341 yegN 1.5.33 1.5.33 1.5.33 2172247 2173488 2176611 2173488 2176610 2179691 putative efflux system protein putative RND-family transporter protein putative RND-family transporter protein STY1961 STY0183 STY0196 STY2439 manZ kdgT yadI fruA 1.5.37 1.5.37 1.5.37 1.5.37 1851971 192388 206167 2269939 1852822 193341 206607 2271627 STY2442 fruB 1.5.37 2272582 2273712 STY2667 STY2668 ptsH 1.5.37 1.5.37 2505403 2505709 2505660 2507437 STY2670 STY2816 STY2953 crr srlA 1.5.37 1.5.37 1.5.37 2507478 2679294 2831196 2507987 2680655 2831759 STY2954 srlE 1.5.37 2831756 2832727 STY2955 srlB 1.5.37 2832739 2833101 STY3441 gatA 1.5.37 3285273 3285737 STY3442 gatB 1.5.37 3285768 3286052 STY3443 gatC 1.5.37 3286056 3287429 STY3925 STY3992 uhpA 1.5.37 1.5.37 3788304 3857652 3789677 3858242 STY3993 uhpB 1.5.37 3858242 3859744 STY3994 STY3995 STY3999 STY4000 STY4004 STY4013 STY4014 STY4015 STY4016 STY4111 uhpC uhpT 1.5.37 1.5.37 1.5.37 1.5.37 1.5.37 1.5.37 1.5.37 1.5.37 1.5.37 1.5.37 3859754 3861225 3864845 3865208 3868976 3876469 3876905 3877536 3878285 3970915 3861082 3862616 3865132 3866566 3869245 3876894 3877390 3878285 3879142 3972831 STY4740 STY4741 STY4771 STY4794 sgaB sgaA treB 1.5.37 1.5.37 1.5.37 1.5.37 4602188 4602503 4631069 4652879 4602493 4602967 4632277 4654297 STY0723 nagE 1.5.37 721238 723190 1.5.37 1.5.37 908948 910323 910291 910643 1.5.38 1800435 1802120 putative sulphate transporter 1.5.39 1.5.39 3424379 4248355 3425830 4249731 trk system potassium uptake protein potassium transport protein SMR family STY1585 1.5.34 1532330 1532692 putative conserved membrane protein SSS family STY1160 STY3562 putP panF STY4471 1.5.35 1.5.35 1122071 3405869 1123579 3407320 1.5.35 4356633 4358282 sodium/proline symporter (proline permease) sodium/pantothenate symporter (pantothenate permease) Sodium:solute symporter family protein 1.5.36 1.5.36 1.5.36 2976309 3039474 4033187 2977598 3040703 4034485 putative serine transporter probable amino acid transport protein putative amino acid permease STP family STY3109 STY3167 STY4173 sdaC yhjV Sugar-specific PTS system STY1242 ptsG 1.5.37 1196033 1197466 STY1448 STY1450 STY1451 STY1799 celC 1.5.37 1.5.37 1.5.37 1.5.37 1399786 1401175 1402499 1719288 1400223 1402488 1402780 1719635 STY1800 celB 1.5.37 1719686 1721044 STY1801 celA 1.5.37 1721127 1721447 STY1959 manX, ptsL, gptB manY 1.5.37 1850137 1851105 STY1960 1.5.37 1851158 1851958 PTS system, glucose-specific IIBC component putative phosphotransferase enzyme putative phosphotransferase enzyme putative phosphotransferase enzyme phosphoenolpyruvate dependent phosphotransferase enzyme III-cellobiose PTS system, cellobiose-specific IIC component PTS system, cellobiose-specific IIB component PTS system, mannose-specific IIAB component phosphotransferase enzyme II, C component mtlA STY0917 STY0918 phosphotransferase enzyme II, D component 2-keto-3-deoxygluconate permease putative PTS system IIA component PTS system, fructose-specific IIBC component pts system, fructose-specific IIA/FPR component phosphocarrier protein HPr phosphoenolpyruvate-protein phosphotransferase (pseudogene) pts system, glucose-specific IIA component putative PTS system IIBC component PTS system, glucitol/sorbitol-specific IIBC component PTS system, glucitol/sorbitol-specific IIBC component PTS system, glucitol/sorbitol-specific IIA component PTS system, galactitol-specific IIA component PTS system, galactitol-specific IIB component PTS system, galactitol-specific IIC component probable PTS system permease Two-component system response regulator protein two-component system sensor histidine kinase regulatory protein hexosephosphate transport protein putative PTS system IIB component putative PTS system IIC component putative PTS system phosphocarrier protein putative PTS system protein putative PTS system protein putative PTS system protein putative PTS system protein mannitol-specific enzyme II of phosphotransferase system putative PTS system IIB protein probable sugar phosphotransferase putative sugar transporter PTS system, trehalose-specific IIBC component pts system, N-acetylglucosamine-specific IIABC component possible transport protein putative phosphotransferase enzyme II, B component SulP family STY1907 Trk system STY3574 STY4388 trkH trkA, sapG Uptake of DNA STY3657 yifB 1.5.40 3515196 3550387 STY0984 ycaI 1.5.40 978645 980909 possible competence-related protein (pseudogene) putative competence-related protein 1.5.41 2482830 2483828 putative ion-channel protein VIC family STY2647 APC family of transport protein STY0173 STY2435 STY0438 STY0738 aroP lysP proY potE 1.5.42 1.5.42 1.5.42 1.5.42 176527 2265246 446857 738049 177897 2266715 448227 739368 aromatic amino acid transport protein AroP lysine-specific permease proline-specific permease ProY putrescine-ornithine antiporter tyrP 1.5.43 1994627 1995838 tyrosine-specific transport protein ArAAP family STY2145 Adaptations, atypical conditions STY0108 STY1421 STY1967 STY1975 STY2204 STY3969 STY3970 STY4153 1.6.1 1.6.1 1.6.1 1.6.1 1.6.1 1.6.1 1.6.1 1.6.1 105614 1372127 1857152 1861658 2042823 3838396 3838919 4012626 107968 1372537 1857361 1862539 2043035 3838809 3839347 4012838 organic solvent tolerance protein precursor heat shock protein cold shock-like protein CspC heat shock protein cold shock protein heat shock protein A heat shock protein B cold shock protein STY4212 STY4299 STY4683 imp hslJ cspC htpX cspB hslT hslS cspA, cspA uspA hslR cutA 1.6.1 1.6.1 1.6.1 4078877 4177131 4545555 4079311 4177532 4545902 STY4890 cstA 1.6.1 4751918 4754068 universal stress protein A heat shock protein periplasmic divalent cation tolerance protein CutA probable carbon starvation protein Osmotic adaptation STY1186 STY1187 mdoG 1.6.2 1.6.2 1145268 1146694 1146422 1148229 STY1188 mdoH 1.6.2 1148222 1150765 STY1346 osmB 1.6.2 1305567 1305785 STY1497 STY1924 STY2137 STY2138 STY4387 STY4911 osmC treA otsA otsB mscL osmY 1.6.2 1.6.2 1.6.2 1.6.2 1.6.2 1.6.2 1454503 1816673 1988269 1989665 4247800 4772444 1454934 1818385 1989690 1990468 4248213 4773061 glucans biosynthesis protein periplasmic glucans biosynthesis protein MdoG precursor periplasmic glucans biosynthesis protein MdoH osmotically inducible lipoprotein B precursor osmotically inducible protein C periplasmic trehalase (pseudogene) trehalose-6-phosphate synthase trehalose phosphatase large-conductance mechanosensitive channel Putative periplasmic protein Cell division STY1092 STY1316 STY0141 STY0147 STY0151 STY0152 STY0153 STY1792 STY1944 STY1945 STY1946 STY1965 STY2158 STY2602 STY2664 STY0261 STY3474 STY3475 STY3777 STY4240 STY4241 STY4242 STY4311 STY4326 STY0489 STY0690 STY0958 STY0996 1.7.1 1.7.1 1.7.1 1071410 1275070 142759 1071919 1275609 143124 cell division inhibitor putative intracellular septation protein cell division protein FtsL mesJ ftsH ftsJ ftsN ftsY ftsE ftsX damX fic tig mrdB, rodA ftsK mukB 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 150130 154947 155774 157097 1712716 1833688 1834419 1835235 1855187 151374 155777 157036 158248 1712958 1834395 1835231 1835501 1856932 cell division protein FtsW cell division protein FtsQ cell division protein FtsA cell division protein FtsZ cell division activator CedA septum site determining protein septum site determining protein cell division topological specificity factor penicillin-binding protein 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 1.7.1 2003884 2438615 2501696 276262 3319213 3321251 3643326 4105776 4107254 4107915 4189611 4208646 493813 685657 2004606 2439616 2502682 277554 3321147 3321877 3644318 4107251 4107922 4108970 4190888 4209248 495111 686769 cell-division regulatory protein Div protein cell division protein cell cycle protein MesJ cell division protein cell division protein cell division protein cell division protein cell division ATP-binding protein FtsE cell division protein DamX protein cell filamentation protein Fic trigger factor rod shape-determining protein RodA 1.7.1 1.7.1 947909 990720 951940 995186 cell division protein FtsK cell division protein 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 2.1.1 1597769 1703302 1731505 1936709 2000644 2037487 2101051 2269017 2590945 2979135 2999813 3001645 3008249 3052190 3064471 3111090 3436587 3566644 437771 440872 469625 829029 1598404 1704157 1732311 1937407 2002476 2037957 2102481 2269874 2592294 2979950 3001648 3005190 3011620 3052441 3066204 3111797 3437369 3567315 440875 442074 469867 831050 endonuclease III putative nuclease (pseudogene) exodeoxyribonuclease III exodeoxyribonuclease X excinuclease ABC subunit C patch repair protein exodeoxyribonuclease I endonuclease IV exodeoxyribonuclease large subunit 5'-3' exonuclease exonuclease V alpha-subunit exonuclease V subunit exonuclease V subunit endonuclease fragment single-stranded DNA-specific exonuclease endonuclease I putative deoxyribonuclease putative endonuclease exonuclease SbcC exonuclease SbcD exodeoxyribonuclease small subunit excision nuclease ABC subunit B 2.1.2 1179342 1182545 ribonuclease E 2.1.2 2.1.2 1309430 1614382 1311364 1615029 exoribonuclease II ribonuclease T Degradation of DNA STY1669 STY1781 STY1812 STY2084 STY2154 STY2199 STY2276 STY2438 STY2753 STY3111 STY3131 STY3132 STY3134 STY3184 STY3198 STY3246 STY3583 STY3717 STY0429 STY0430 STY0463 STY0831 nth xthA exoX uvrC vsr sbcB nfo xseA exo recD recB recC recJ endA tatD nfi sbcC sbcD xseB uvrB Degradation of RNA STY1226 sulA ispZ ftsL ftsW ftsQ ftsA ftsZ cedA minC minD minE ftsI2, pbpB2 sdiA div STY1350 STY1688 rne, ams, hmp1 rnb rnt STY1947 STY0253 STY2827 STY0284 STY3939 STY4060 STY4710 STY4725 STY0666 rnd rnhB rnc rnhA rnpA rph orn, yjeR rnr rna 2.1.2 2.1.2 2.1.2 2.1.2 2.1.2 2.1.2 2.1.2 1835623 265810 2688914 300696 3803950 3920902 4571379 1836750 266406 2689594 301163 3804309 3921618 4571924 ribonuclease D ribonuclease HII ribonuclease III ribonuclease H RNase P, protein component RNase PH oligoribonuclease STY0943 clpA 2.1.4 934397 936673 STY2460 yejH 2.2.0 2290935 2292695 ATP-dependent Clp protease ATP-binding subunit ClpA putative helicase 2.1.2 2.1.2 4587425 664818 4589863 665624 ribonuclease R (RNase R) ribonuclease I precursor Amino acyl tRNA syn; tRNA modific'n STY1004 2.2.01 1001995 1003395 asparaginyl-tRNA synthetase STY0110 asnS, tss rluA 2.2.01 109129 109788 STY1227 rluC 2.2.01 1183119 1184078 STY1274 trmU 2.2.01 1231074 1232180 STY1673 STY1772 STY1773 STY1774 tyrS pheT pheS pheM 2.2.01 2.2.01 2.2.01 2.2.01 1601969 1693623 1696026 1697146 1603243 1696010 1697009 1697190 STY1778 STY1817 STY1909 STY2109 STY2117 STY0210 STY2384 STY0213 thrS selD pth aspS argS yadB metG ligT, yadP truA gltX hisS trmD proS alaS lysS cca truB 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 1698557 1736601 1802695 1960070 1967557 219841 2215321 222159 1700485 1737644 1803303 1961842 1969290 220737 2217354 222689 ribosomal large subunit pseudouridine synthase A ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) tRNA (5-methylaminomethyl-2thiouridylate)-methyltransferase tyrosyl-tRNA synthetase phenylalanyl-tRNA synthetase beta chain phenylalanyl-tRNA synthetase alpha chain phenylalanyl-tRNA synthetase operon leader peptide threonyl-tRNA synthetase selenophosphate synthase peptidyl-tRNA hydrolase aspartyl-tRNA synthetase arginyl-tRNA synthetase glutamyl-tRNA synthetase-related protein methionyl-tRNA synthetase 2'-5' RNA ligase 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 2435482 2490763 2619121 2731141 280765 2824270 3061741 3226722 3307855 2436294 2492187 2620395 2731908 282483 2826900 3063258 3227963 3308799 2.2.01 2.2.01 2.2.01 3603465 3707114 3911423 3604565 3707986 3912112 STY4113 STY4143 STY4144 STY4315 STY4390 STY0442 trmA rbn trmH, spoU selA glyQ glyS trpS fmt queA 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 3974013 4006109 4007030 4193344 4251094 451765 3975404 4007020 4009099 4194348 4252041 452829 STY0443 tgt 2.2.01 453026 454153 STY4704 STY4717 yjeA miaA 2.2.01 2.2.01 4562588 4579891 4563565 4580841 STY4809 STY4814 STY0055 STY0585 STY0699 STY0716 miaE valS ileS cysS leuS miaB 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 2.2.01 4669470 4673101 53852 592342 693874 711231 4670231 4675956 56686 593727 696456 712697 Degradation of polysaccharides STY1505 STY0018 STY2171 STY0257 STY4134 STY4183 STY4283 STY0819 glgX amyA malS yhjM malQ ybhC 2.1.3 2.1.3 2.1.3 2.1.3 2.1.3 2.1.3 2.1.3 2.1.3 1463253 17873 2015215 271774 3996312 4044889 4156673 814916 1465064 19972 2016699 273537 3998339 4045998 4158754 816199 putative glycogen debranching protein putative chitinase cytoplasmic alpha-amylase putative secreted chitinase alpha-amylase probable endoglucanase precursor 4-alpha-glucanotransferase possible pectinesterase precursor aminopeptidase N aminotripeptidase putative protease putative peptidase D-alanyl-D-alanine dipeptidase PcgL precursor dipeptidyl carboxypeptidase II protease IV tail-specific protease precursor oligopeptidase putative protease ecotin precursor protease DO precursor; heat shock protein HtrA peptidase B (leucyl aminopeptidase) Degradation of proteins, peptides, glyco STY1078 STY1267 STY1334 STY1460 STY1465 pepN pepT STY1549 STY1819 STY1976 STY2085 STY2365 STY2488 STY0231 dcp sppA prc opdB STY2782 yfhI, pepB clpB hycI ptr pepP degQ degS pepQ hslV hslU pepD yhjJ prlC hopD pepE STY2849 STY2967 STY3133 STY3214 STY3528 STY3529 STY3576 STY3778 STY3779 STY0361 STY4190 STY4209 STY4356 STY4407 STY4816 STY4868 STY0490 STY0491 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 1053181 1222902 1291577 1410094 1414966 1055793 1224131 1292623 1412058 1415736 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 1500659 1738487 1862732 1937444 2196156 2317010 241500 1502701 1740343 1864780 1939495 2197517 2317504 242927 2.1.4 2640339 2641622 iadA clpP 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2.1.4 2717996 2844595 3005183 3082165 3369026 3370486 3426483 3644410 3644950 370276 4053367 4074184 4232125 4276390 4676536 4730107 495358 2720569 2845065 3008071 3083481 3370393 3371556 3427814 3644940 3646281 371733 4054854 4076226 4232592 4277079 4678047 4731279 495981 clpX 2.1.4 496233 497504 eco htrA ClpB protein (heat shock protein f84.1) hydrogenase 3 maturation protease protease III precursor (pitrilysin) proline aminopeptidase II serine protease serine protease proline dipeptidase heat shock protein heat shock protein aminoacyl-histidine dipeptidase precursor putative zinc-protease precursor oligopeptidase A Type III leader peptidase peptidase E cytosol aminopeptidase probable isoaspartyl dipeptidase ATP-dependent clp protease proteolytic subunit ATP-dependent clp protease ATP-binding subunit ClpX STY2599 STY2654 STY2767 STY2861 STY0269 STY2948 STY3196 STY3383 STY3465 STY3745 STY3851 STY4049 tRNA pseudouridine synthase A glutamyl-tRNA synthetase histidyl-tRNA synthetase tRNA(guanine-N1)methyltransferase prolyl-tRNA synthetase alanyl-tRNA synthetase lysyl tRNA synthetase (LysRS) tRNA nucleotidyltransferase tRNA pseudouridine 55 synthase (psi55 synthase) (p35 protein) tRNA (uracil-5)-methyltransferase ribonuclease BN tRNA (guanosine-2'-O)-methyltransferase L-seryl-tRNA(Ser) selenium transferase glycine-tRNA synthetase, alpha subunit glycine-tRNA synthetase, beta subunit tryptophanyl-tRNA synthetase methionyl-tRNA formyltransferase S-adenosylmethionine:tRNA ribosyltransferase- isomerase queuine tRNA-ribosyltransferase; tRNAguanine transglycosylase lysyl-tRNA synthetase tRNA delta-2-isopentenylpyrophosphate (IPP) transferase tRNA hydroxylase valyl-tRNA synthetase isoleucyl-tRNA synthetase cysteinyl-tRNA synthetase leucyl-tRNA synthetase MiaB protein (putative tRNA-thiotransferase STY0724 STY0953 glnS aat 2.2.01 2.2.01 723401 941414 725068 942118 STY0961 serS 2.2.01 954308 955600 (or tRNA-methylthiotransferase)) glutaminyl-tRNA synthetase leucyl/phenylalanyl-tRNA-protein transferase seryl-tRNA synthetase Basic proteins - synthesis, modification STY2920 STY0493 stpA hupB 2.2.02 2.2.02 2800121 500253 2800522 500525 DNA-binding protein StpA DNA-binding protein HU-beta DNA - replication, repair, restr./modific'n STY1097 STY0112 STY1240 STY1256 STY1336 STY1405 STY1428 STY1652 helD polB holB mfd topA ogt hrpA tus 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 1075470 112880 1193926 1208383 1293319 1356335 1378457 1580815 1077524 115231 1194930 1211829 1295916 1356850 1382359 1581744 STY1771 STY1816 STY1951 STY2082 STY2102 STY2103 STY2106 STY2200 STY2205 STY2206 STY2266 himA topB 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 1693319 1734647 1840118 1935691 1954694 1955713 1958187 2037938 2043481 2044752 2092179 1693618 1736596 1842028 1935921 1955704 1956324 1958708 2039368 2044749 2045171 2092646 helicase IV(75 kD helicase) DNA polymerase II DNA polymerase III, delta' subunit transcription-repair coupling factor (TrcF) DNA topoisomerase I, omega protein I O6-methylguanine-DNA-alkyltransferase ATP-dependent helicase HrpA DNA replication terminus site-binding protein; DNA sequence-specific contrahelicase integration host factor alpha-subunit DNA topoisomerase III putative ATP-dependent helicase DNA polymerase III, theta subunit Holliday junction DNA helicase Holliday junction DNA helicase crossover junction endodeoxyribonuclease DNA-cytosine methyltransferase UmuC protein UmuD protein putative DNA gyrase inhibitory protein 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2169451 220806 222750 2297530 2319432 2320085 2331373 2499609 266430 2687272 2702208 2739173 2827753 2900744 301227 3019626 3066947 3088114 3125080 3194450 3201464 3232006 3235872 3409864 3410246 2170320 221261 225191 2297730 2320082 2321146 2334009 2501624 269912 2688000 2702897 2740834 2828814 2903311 301958 3020321 3067843 3089007 3126132 3196708 3203356 3233751 3236378 3410160 3411130 DNA-3-methyladenine glycosidase II dosage-dependent dnaK suppressor protein ATP-dependent helicase HrpB UmuC-family protein (pseudogene) AlkB protein ADA regulatory protein DNA gyrase subunit A DNA ligase DNA polymerase III, alpha chain DNA repair protein RecO uracil-DNA glycosylase DNA repair protein RecA protein DNA mismatch repair protein DNA polymerase III epsilon subunit DNA mismatch repair protein site-specific integrase/recombinase chromosome intitiation inhibitor A/G-specific adenine glycosylase topoisomerase IV subunit A topoisomerase IV subunit B DNA primase G/U mismatch-specific DNA glycosylase Fis DNA-binding protein putative adenine-specific DNA-modification STY2337 STY0211 STY0214 STY2466a STY2490 STY2491 STY2499 STY2663 STY0254 STY2825 STY2840 STY2870 STY2950 STY3033 STY0285 STY3148 STY3200 STY3220 STY3265 STY3351 STY3359 STY3389 STY3391 STY3565 STY3566 holE ruvB ruvA ruvC dcm umuC umuD sbmC, gyrI alkA dksA hrpB alkB ada gyrA ligA dnaE recO ung recN recA mutS dnaQ mutH xerD iciA mutY parC parE dnaG mug fis yhdJ methylase ATP-dependent DNA helicase DNA helicase II ATP-dependent DNA helicase histone like DNA-binding protein HU-alpha (NS2) (HU-2) primosomal protein replication factor DNA polymerase I chromosomal replication initiator protein DNA polymerase III beta-subunit recF protein DNA gyrase subunit B ATP-dependent DNA helicase conserved hypothetical protein putative DNA repair protein formamidopyrimidine-DNA glycosylase type III restriction-modification system StyLTI enzyme mod type III Restriction-modification system StyLTI enzyme res (pseudogene) 3-methyladenine DNA glycosylase I, constitutive DNA adenine methylase replicative DNA helicase excision nuclease subunit A single-strand DNA-binding protein recombination associated protein RdgC STY3601 STY3608 STY3642 STY3715 recQ uvrD rep hupA 2.2.03 2.2.03 2.2.03 2.2.03 3455088 3461790 3499842 3565553 3456917 3463952 3501866 3565825 STY3775 STY3881 STY3940 STY3941 STY3942 STY3943 STY4048 STY4064 STY4065 STY4068 STY0388 priA polA dnaA dnaN recF gyrB recG dfp radC mutM mod 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 3639854 3736421 3805127 3806532 3807830 3808932 3909336 3923556 3924952 3926357 394911 3642052 3739207 3806527 3807632 3808903 3811346 3911417 3924779 3925617 3927166 396869 STY0389 res 2.2.03 396876 399850 STY4160 tag 2.2.03 4019343 4019924 STY4312 STY4442 STY4450 STY4451 STY0425 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 4191069 4311715 4318337 4321410 434430 4191905 4313130 4321162 4321940 435275 STY4716 STY4748 STY4815 STY4881 dam dnaB uvrA ssb rdgC, yaiD mutL priB holC hsdS 2.2.03 2.2.03 2.2.03 2.2.03 4578042 4606459 4675956 4741999 4579898 4606773 4676438 4743387 STY4883 hsdM 2.2.03 4743384 4744970 STY4885 STY4907 STY4926 STY0510 STY0525 mrr holD radA ybaZ priC 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 4748835 4768834 4786070 516818 531966 4749749 4769271 4787452 517207 532481 STY0528 dnaX 2.2.03 533757 535685 STY0530 STY0697 STY0735 STY0749 STY0756 STY0771 recR holA seqA phrB 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 2.2.03 536060 692238 735177 750319 757169 768705 536665 693269 735719 751740 757735 769496 STY0856 dinG, rarB dps, pexB himD 2.2.03 850960 853104 2.2.03 861286 861789 2.2.03 978131 978415 integration host factor beta-subunit (IHFbeta) 2.2.04 3230314 3231327 possible glycoprotease STY0870 STY0982 nei DNA mismatch repair protein primosomal replication protein N DNA polymerase III, chi subunit subunit S of type I restriction - modification system subunit M of type I restriction - modification system (pseudogene) mrr restriction system protein DNA polymerase III, psi subunit putative DNA repair protein putative methylated-DNA methyltransferase primosomal replication protein n'' (pseudogene) DNA polymerase III subunits gamma and tau recombination protein RecR DNA polymerase III, delta subunit seqA protein deoxyribodipyrimidine photolyase probable DNA recombinase endonuclease VIII, DNA N-glycosylase with an AP lyase activity probable ATP-dependent helicase DinG (pseudogene) DNA protection during starvation protein Glycoprotein STY3387 STY3050 STY0711 Lipopolysaccharide STY0154 lpxC 2.2.05 158349 159266 STY2639 STY0249 lpxD 2.2.05 2.2.05 2474460 262287 2475380 263312 STY0250 fabZ 2.2.05 263418 263873 STY0251 lpxA 2.2.05 263877 264665 STY0252 STY3379 STY3582 STY3626 lpxB rfaE rfaH rffM 2.2.05 2.2.05 2.2.05 2.2.05 264665 3220060 3436091 3481759 265813 3221493 3436579 3482499 STY3627 STY3629 rffT 2.2.05 2.2.05 3482496 3484927 3483854 3486177 STY3630 STY3631 STY3632 STY3633 rffA rffC rffH rffG 2.2.05 2.2.05 2.2.05 2.2.05 3486179 3487314 3487969 3488883 3487309 3487862 3488850 3489950 STY3634 STY3635 rffD wecB, rffE 2.2.05 2.2.05 3489950 3491209 3491212 3492339 2.2.05 2.2.05 3492395 3493453 3493441 3494556 waaQ, rfaQ waaG, rfaG waaP, rfaP waaY, rfaY waaZ, rfaZ waaK, rfak waaL, rfaL, rfbT waaC, rfaC waaF, rfaF lpxK, ycaH 2.2.05 3929404 2.2.05 STY1192 STY1767 STY2097 STY2624 STY3636 STY3637 STY4071 STY4072 STY4073 STY4079 STY4080 STY4081 STY4082 STY4083 STY4084 STY0986 rfe UDP-3-O-[3-hydroxymyristoyl] Nacetylglucosamine deacetylase putative acyltransferase UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (3R)-hydroxymyristol acyl carrier protein dehydrase acyl-[acyl-carrier-protein]:UDP-Nacetylglucosamine O-acyltransferase lipid-A-disaccharide synthase ADP-heptose synthase transcriptional activator probable UDP-N-acetyl-Dmannosaminuronic acid transferase probable 4-alpha-l-fucosyltransferase putative lipopolysaccharide biosynthesis protein lipopolysaccharide biosynthesis protein lipopolysaccharide biosynthesis protein glucose-1-phosphate thymidylyltransferase UDP-N-acetylglucosamine epimerase (UDPGlcNAc -2-epimerase) UDP-ManNAc dehydrogenase UDP-N-acetyl-D-glucosamine 2-epimerase nlpD lnt 2.2.06 2.2.06 2916132 706916 2917253 708454 lipoprotein NlpD precursor apolipoprotein N-acyltransferase STY1231 plsX 2.2.07 1185823 1186902 STY1312 STY1341 STY2153 STY2845 cls pgpB pgsA pssA 2.2.07 2.2.07 2.2.07 2.2.07 1271381 1301795 2000039 2708255 1272841 1302559 2000587 2709610 STY3143 STY3350 STY3800 lgt plsC cdh 2.2.07 2.2.07 2.2.07 3015066 3193456 3665275 3015941 3194193 3665415 STY4431 STY4708 plsB psd 2.2.07 2.2.07 4301303 4569160 4303723 4570128 2.2.07 465189 465704 fatty acid/phospholipid synthesis protein PlsX cardiolipin synthetase phosphatidylglycerophosphatase B phosphotidylglycerophosphate synthetase CDP-diacylglycerol-serine Ophosphatidyltransferase prolipoprotein diacylglyceryl transferase 1-acyl-glycerol-3-phosphate acyltransferase CDP-diacylglycerol pyrophosphatase (pseudogene) glycerol-3-phosphate acyltransferase phosphatidylserine decarboxylase proenzyme phosphatidylglycerophosphatase A Phospholipids STY0459 Polysaccharides - (cytoplasmic) STY3376 STY4001 STY4003 glgS 2.2.08 2.2.08 2.2.08 3216815 3866559 3868106 3217018 3868043 3868966 3930438 lipopolysaccharide biosynthesis protein putative undecaprenyl-phosphate alpha-Nacetylglucosaminyltransferase lipopolysaccharide core biosynthesis protein STY4272 STY4273 STY4274 STY4275 STY4276 glgB glgX glgC glgA glgP 2.2.08 2.2.08 2.2.08 2.2.08 2.2.08 4137658 4139841 4141820 4143115 4144568 4139844 4141805 4143115 4144548 4147015 glycogen synthesis protein GlgS putative carbohydrate kinase putative sugar-bisphosphate aldolase (pseudogene) 1,4-alpha-glucan branching enzyme glycogen operon protein glucose-1-phosphate adenylyltransferase glycogen synthase glycogen phosphorylase 3930435 3931559 lipopolysaccharide core biosynthesis protein Protein modufication 2.2.05 3931552 3932349 lipopolysaccharide core biosynthesis protein 2.2.05 3936674 3937372 lipopolysaccharide core biosynthesis protein STY0107 STY1936 STY1984 2.2.09 2.2.09 2.2.09 104274 1830116 1872287 105560 1830646 1872937 survival protein SurA precursor disulfide bond formation protein B serine/threonine protein phosphatase 1 2.2.05 3937522 3938331 2.2.09 2.2.09 2305384 2899240 2305941 2899896 2.2.05 3938430 3939575 STY3051 pcm 2.2.09 2917429 2918055 2.2.05 3939632 3940846 lipopolysaccharide core biosynthesis protein RfaZ lipopolysaccharide 1,2-Nacetylglucosaminetransferase O-antigen ligase surA dsbB pphA, prpA dsbE1 STY3061 iap 2.2.09 2925121 2926167 STY3199 STY3371 STY3372 STY3380 STY3647 STY3883 STY3965 STY4324 dsbC dsbA dsbB glnE ppiC dsbA dsbE2 ppiA, rotA slyD 2.2.09 2.2.09 2.2.09 2.2.09 2.2.09 2.2.09 2.2.09 2.2.09 3066210 3213820 3214506 3221541 3504360 3740516 3834807 4207808 3066923 3214491 3215183 3224384 3504641 3741139 3835364 4208380 thiol:disulfide interchange protein possible serine/threonine protein phosphatase L-isoaspartyl protein carboxyl methyltransferase type II alkaline phosphatase isozyme conversion protein thiol:disulfide interchange protein disulfide isomerase disulfide isomerase adenyl-transferase peptidyl-prolyl cis-trans isomerase C thiol:disulfide interchange protein thiol:disulfide interchange protein peptidyl-prolyl cis-trans isomerase 2.2.09 4222599 4223189 fkpA fms, def 2.2.09 2.2.09 4223814 4252057 4224632 4252566 2.2.05 3940886 3941839 lipopolysaccharide heptosyltransferase-1 2.2.05 3941839 3942885 ADP-heptose-LPS heptosyltransferase II 2.2.05 982691 983668 tetraacyldisaccharide 4'-kinase htrB 2.2.06 1152892 1153812 nlpC msbB vacJ 2.2.06 2.2.06 2.2.06 1690203 1949632 2458732 1690667 1950603 2459487 lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) (heat shock protein) putative lipoprotein lipid A acyltransferase VacJ lipoprotein precursor Lipoprotein STY2474 STY3030 STY4343 STY4345 STY4391 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP-type peptidyl-prolyl isomerase polypeptide deformylase STY4767 STY4845 msrA STY0494 STY4863 ppiD trpS2 2.2.09 2.2.09 4624308 4703505 4624946 4704156 2.2.09 2.2.1 500816 4725840 502687 4726853 peptide methionine sulfoxide reductase thiol:disulfide interchange protein (pseudogene) peptidyl-prolyl cis-trans isomerase D probable tryptophanyl-tRNA synthetase STY4101 STY4292 STY4293 STY4383 Proteins - translation and modification STY1345 STY1777 STY1901 STY2329 STY2330 STY2447 STY0238 STY0240 STY0242 STY2828 STY2829 STY2864 STY2874 STY0265 STY3197 STY3466 STY3467 STY3739 STY0360 STY4114 STY4352 STY4353 STY4694 STY4910 STY0056 STY0057 infC prfA wzc wzb yeiP map tsf frr lepB lepA ffh smpB yaeJ prfB rbfA infB tufB prfH selB fusA tufA, tufB efp prfC lspA fkpB STY0584 STY0951 ppiB infA 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 2.2.10 1305121 1698011 1794933 2156864 2159020 2277111 249937 252164 254032 2689868 2690859 2733112 2742393 278825 3063268 3308799 3309421 3589422 369507 3975401 4227831 4230017 1305447 1698445 1796015 2159023 2159469 2277683 250731 253015 254589 2690842 2692658 2734473 2742875 279247 3064366 3309200 3312099 3590606 370121 3977251 4229945 4231201 putative translation initiaiton factor initiation factor IF-3 peptide chain release factor 1 (RF-1) putative tyrosine-protein kinase putative protein-tyrosine phosphatase EF-P-family protein (pseudogene) methionine aminopeptidase elongation factor Ts ribosome recycling factor signal peptidase I GTP-binding protein LepA signal recognition particle protein SsRA-binding protein putative release factor peptide chain release factor 2 (RF-2) ribosome-binding factor A (P15B protein) protein chain initiation factor 2 elongation factor Tu putative peptide chain release factor selenocysteine-specific elongation factor elongation factor G elongation factor Tu STY4389 2.2.10 2.2.10 2.2.10 2.2.10 4556104 4770453 56686 57341 4556670 4772042 57186 57790 Arginine 2.2.10 2.2.10 591675 940884 592169 941102 elongation factor P peptide chain release factor 3 lipoprotein signal peptidase probable FkbB-type 16 kD peptidyl-prolyl cis- trans isomerase peptidyl-prolyl cis-trans isomerase B initiation factor IF-1 STY4726 STY0457 STY4949 yibK greB rpoA, pez, phs, sez sun, fmu, fmv, rsmB yjfH nusB lasT 2.2.11 2.2.11 2.2.11 2.2.11 3959072 4167138 4169567 4245212 3959545 4169468 4170040 4246201 chain putative RNA-methyltransferase putative transcription accessory protein transcription elongation factor GreB DNA-directed RNA polymerase alpha chain 2.2.11 4249753 4251042 sun protein 2.2.11 2.2.11 2.2.11 4589954 463736 4808327 4590685 464155 4809013 probable tRNA/rRNA methyltransferase N utilization substance protein B putative RNA methyltransferase tRNA STY3731 rpoC 2.2.12 3576977 3581200 STY3732 rpoB 2.2.12 3581277 3585305 STY4884 hsdR 2.2.3 4745128 4748637 3.1.0 2426285 2427682 DNA-directed RNA polymerase, beta'subunit DNA-directed RNA polymerase, betasubunit subunit R of type I restriction - modification system putative amino acid decarboxylase avtA alr 3.1.01 3.1.01 3994888 4313162 3996138 4314241 valine--pyruvate aminotransferase alanine racemase STY3130 STY3470 STY3540 STY3750 STY3751 STY3752 argA argG argR argH argB argC 3.1.02 3.1.02 3.1.02 3.1.02 3.1.02 3.1.02 2998379 3314668 3381626 3608405 3609899 3610683 2999710 3316077 3382096 3609781 3610672 3611687 STY3753 STY4328 argE argD, dtU, argD 3.1.02 3.1.02 3611776 4209929 3612927 4211146 N-acetylglutamate synthase argininosuccinate synthetase arginine repressor argininosuccinate lyase acetylglutamate kinase N-acetyl-gamma-glutamyl-phosphate reductase acetylornithine deacetylase acetylornithine aminotransferase 3.1.02 3.1.02 4663345 4667825 4664349 4668829 ornithine carbamoyltransferase ornithine carbamoyltransferase asnA asnC asnB 3.1.03 3.1.03 3.1.03 3762923 3764066 714919 3763915 3764524 716583 asparagine synthetase A regulatory protein asparagine synthetase B aspC 3.1.04 998923 1000113 aspartate aminotransferase aroD 3.1.05 1681680 1682438 3-dehydroquinate dehydratase STY2590 Alanine STY4133 STY4443 RNA synthesis, modification, DNA transcript'n STY0111 STY1410 STY1964 STY0209 STY2459 hepA dbpA rrmA pcnB yejD, rsuA 2.2.11 2.2.11 2.2.11 2.2.11 2.2.11 109800 1360852 1854312 218282 2290088 112706 1362223 1855121 219700 2290783 STY2791 STY2836 STY2841 STY0262 STY3461 srmB yfiF rof 2.2.11 2.2.11 2.2.11 2.2.11 2.2.11 2647697 2698505 2703013 277638 3301996 2648428 2699839 2704050 277892 3303936 STY3463 STY3468 STY3477 STY3638 STY3640 STY3737 STY4051 pnp nusA greA rho rhlB nusG rpoZ 2.2.11 2.2.11 2.2.11 2.2.11 2.2.11 2.2.11 2.2.11 3305058 3312124 3322453 3494786 3496937 3588262 3914247 3307193 3313626 3322929 3496045 3498202 3588807 3914522 probable ATP-dependent helicase HepA ATP-dependent RNA helicase (pseudogene) rRNA guanine-N1-methyltransferase poly(A) polymerase ribosomal small subunit pseudouridine synthase putative RNA methyltransferase ATP-dependent RNA helicase SrmB putative RNA methyltransferase ROF protein ATP-dependent RNA helicase (dead-box protein) polynucleotide phosphorylase L factor transcription elongation factor transcription termination factor putative ATP-dependent RNA helicase transcription antitermination protein DNA-directed RNA polymerase omega STY4803 STY4807 Asparagine STY3901 STY3902 STY0718 Aspartate STY1000 Chorismate STY1760 STY1852 STY2616 STY2857 aroQ aroC aroF 3.1.05 3.1.05 3.1.05 1763561 2449561 2727355 1764106 2450646 2728425 STY4309 STY4310 STY4396 STY0421 STY0423 STY0978 aroK aroB aroE aroL aroM aroA 3.1.05 3.1.05 3.1.05 3.1.05 3.1.05 3.1.05 4187847 4188425 4255418 432346 433360 973145 4188368 4189513 4256236 432891 434037 974428 cysB cysK cysM cysE 3.1.06 3.1.06 3.1.06 3.1.06 1296327 2504048 2511817 3954197 1297301 2505019 2512728 3955018 putative chorismate mutase chorismate synthase phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive shikimate kinase I 3-dehydroquinate synthase shikimate dehydrogenase shikimate kinase II AroM protein 3-phosphoshikimate 1carboxyvinyltransferase Cysteine STY1337 STY2666 STY2677 STY4096 cys regulon transcriptional activator cysteine synthase A cysteine synthase B serine acetyltransferase Glutamate STY1815 STY1922 gdhA gdhA 3.1.07 3.1.07 1733274 1815290 1734617 1816459 NADP-specific glutamate dehydrogenase glutamate dehydrogenase STY0237 STY3874 STY3875 glnD glnA glnL 3.1.08 3.1.08 3.1.08 247152 3728319 3730003 249824 3729728 3731052 STY3876 glnG 3.1.08 3731061 3732470 [protein-PII] uridylyltransferase glutamine synthetase Two-component system sensory histidine kinase Two-component system, response regulator STY0134 leuO 3.1.12 135983 136927 probable activator protein in leuABCD operon STY0236 dapD 3.1.13 246298 247122 STY2721 STY2727 STY3157 STY3158 STY3612 STY4271 STY4416 STY0073 dapE dapA lysA lysR dapF asd lysC dapB 3.1.13 3.1.13 3.1.13 3.1.13 3.1.13 3.1.13 3.1.13 3.1.13 2558007 2564354 3029651 3031031 3466407 4136176 4283548 74013 2559134 2565232 3030913 3031966 3467231 4137282 4284897 74834 2,3,4,5-tetrahydropyridine-2-carboxylate Nsuccinyltransferase succinyl-diaminopimelate desuccinylase dihydrodipicolinate synthase diaminopimelate decarboxylase transcriptional activator protein LysR diaminopimelate epimerase aspartate-semialdehyde dehydrogenase lysine-sensitive aspartokinase III dihydrodipicolinate reductase STY3333 STY3594 metC metE 3.1.14 3.1.14 3176677 3447467 3177864 3449731 STY3595 STY3761 STY3768 metR metF metL 3.1.14 3.1.14 3.1.14 3449980 3623363 3632107 3450933 3624253 3634539 STY3769 STY3770 STY4400 STY4405 metB metJ metA metH 3.1.14 3.1.14 3.1.14 3.1.14 3634542 3635967 4263539 4270729 3635702 3636284 4264468 4274412 STY2709 maeB 3.1.15 2540186 2542465 STY2853a STY2854 STY0801 pheA aroG 3.1.15 3.1.15 3.1.15 2723990 2724137 797808 2724037 2725297 798860 NADP-dependent malate dehydrogenase (decarboxylating) phe leader peptide chorismate mutase-P/prephenate dehydratase phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthetase) phenylalanine repressible proB proA proC 3.1.16 3.1.16 3.1.16 375618 376733 430757 376721 377983 431566 glutamate 5-kinase gamma-glutamyl phosphate reductase pyrroline-5-carboxylate reductase serA serB serC 3.1.17 3.1.17 3.1.17 3085804 4785018 971986 3087036 4785986 973074 D-3-phosphoglycerate dehydrogenase putative phosphoserine phosphatase phosphoserine aminotransferase thrL thrB thrA thrC 3.1.18 3.1.18 3.1.18 3.1.18 190 2801 337 3734 255 3730 2799 5020 thr operon leader peptide homoserine kinase aspartokinase I/homoserine dehydrogenase I threonine synthase Lysine Methionine Glutamine beta-cystathionase 5-methyltetrahydropteroyltriglutamatehomocysteine methyltransferase trans-activator of metE and metH 5,10 methylenetetrahydrofolate reductase bifunctional aspartokinase II/homoserine dehydrogenase IIcan I write cystathionine gamma-synthase repressor of the methionine regulon homoserine O-succinyltransferase B12-dependent homocysteine-N5methyltetrahydrofolate transmethylase Phenylalanine Glycine STY1198 STY2802 solA glyA 3.1.09 3.1.09 1156697 2657781 1157815 2659034 putative sarcosine oxidase serine hydroxymethyltransferase Histidine STY2279A STY2280 STY2281 STY2282 hisL hisG hisD hisC 3.1.10 3.1.10 3.1.10 3.1.10 2106208 2106396 2107398 2108699 2106249 2107295 2108702 2109778 STY2283 hisB 3.1.10 2109775 2110842 STY2284 STY2285 hisH hisA 3.1.10 3.1.10 2110842 2111432 2111432 2112169 STY2286 STY2287 hisF hisI, hisIE 3.1.10 3.1.10 2112151 2112921 2112927 2113532 his operon leader peptide ATP phosphoribosyltransferase histidinol dehydrogenase histidinol-phosphate aminotransferase (imidazole) imidazoleglycerol-phosphate dehydratase; histidinol phosphatase amidotransferase phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase cyclase HisF phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase Leucine STY0129 STY0130 STY0131 STY0132 STY0133 Proline STY0366 STY0367 STY0419 Serine STY3218 STY4925 STY0977 Threonine leuD leuC leuB leuA leuL 3.1.12 3.1.12 3.1.12 3.1.12 3.1.12 130471 131087 132490 133581 135240 131076 132487 133581 135152 135326 3-isopropylmalate dehydratase 3-isopropylmalate dehydratase 3-isopropylmalate dehydrogenase 2-isopropylmalate synthase leu operon leader peptide STY0001 STY0003 STY0002 STY0004 Tryptophan STY1155 STY1324 STY1325 STY1326 STY1327 wrbA trpA trpB trpC trpD 3.1.19 3.1.19 3.1.19 3.1.19 3.1.19 1115313 1280630 1281436 1282639 1284001 1115909 1281436 1282629 1283997 1285596 STY1328 STY1763 trpE aroH 3.1.19 3.1.19 1285596 1686242 1287158 1687288 STY2779 sseA 3.1.19 2637127 2637969 trp repressor binding protein tryptophan synthase alpha chain tryptophan synthase beta chain indole-3-glycerol phosphate synthase anthranilate synthase component II; anthranilate phosphoribosyltransferase anthranilate synthase component I 3-deoxy-D-arabinoheptulosonate 7phosphate synthase putative thiosulfate sulfurtransferase Tyrosine STY2856 tyrA 3.1.20 2726224 2727345 STY4444 tyrB 3.1.20 4314427 4315620 chorismate mutase/prephenate dehydrogenase aromatic-amino-acid aminotransferase Valine STY2222 STY2225 STY2226 STY2228 STY2229 cbiP cbiN cbiM cbiL cbiK 3.2.03 3.2.03 3.2.03 3.2.03 3.2.03 2056413 2059418 2059701 2060434 2061144 2057933 2059699 2060437 2061147 2061937 STY2231 STY2232 STY2233 STY2234 STY2235 STY2236 cbiJ cbiH cbiG cbiF cbiT cbiE 3.2.03 3.2.03 3.2.03 3.2.03 3.2.03 3.2.03 2061940 2062727 2063452 2064488 2065245 2065813 2062730 2063452 2064507 2065261 2065823 2066418 STY2237 STY2238 STY2239 STY2240 STY0694 cbiD cbiC cbiB cbiA cobC, phpB cobD 3.2.03 3.2.03 3.2.03 3.2.03 3.2.03 2066412 2067551 2068041 2068997 689821 2067551 2068030 2069000 2070421 690429 putative cobyric acid synthase putative cobalt transport protein CbiN CbiM protein (pseudogene) precorrin-2 C20-methyltransferase putative cobalamin biosynthethesis protein (pseudogene) precorrin-6x reductase (pseudogene) precorrin-3 C17-methyltransferase CbiG protein precorrin-4 C11-methyltransferase precorrin-8W decarboxylase precorrin-6Y C5,15-methyltransferase [decarboxylating] CbiD protein precorrin-8X methylmutase (pseudogene) CbiB protein cobyrinic acid A,C-diamide synthase alpha-ribazole-5'-phosphate phosphatase 3.2.03 690526 691620 putative aminotransferase CobD entD entF entC entE entB entA 3.2.04 3.2.04 3.2.04 3.2.04 3.2.04 3.2.04 624926 629581 640379 641555 643182 644039 625630 633465 641548 643168 644039 644794 enterobactin synthetase component D enterobactin synthetase component F isochorismate synthase EntC 2,3-dihydroxybenzoate-AMP ligase isochorismatase 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase STY0102 STY1237 STY1954 STY0208 folA pabC pabB folK 3.2.05 3.2.05 3.2.05 3.2.05 100653 1191470 1842770 217806 101132 1192279 1844134 218285 STY2427 STY2596 STY3473 STY4327 folE folC folP pabA 3.2.05 3.2.05 3.2.05 3.2.05 2256801 2432374 3318260 4209280 2257469 2433642 3319108 4209843 STY0588 folD 3.2.05 594664 595530 dihydrofolate reductase type I 4-amino-4-deoxychorismate lyase para-aminobenzoate synthase component I 2-amino-4-hydroxy-6hydroxymethyldihydropteridine pyrophosphokinase GTP cyclohydrolase I folylpolyglutamate synthase dihydropteroate synthase para-aminobenzoate synthase, glutamine amidotransferase component II FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase STY0695 STY0135 ilvI 3.1.21 137249 138973 STY0136 ilvH 3.1.21 138973 139467 STY3648 STY3649 ilvC ilvY 3.1.21 3.1.21 3504733 3506373 3506208 3507260 STY3652 STY3653 STY3654 STY3655 STY3656 STY3656A STY3985 STY3986 STY3987 ilvA ilvD ilvE ilvM ilvG ilvL ivbL ilvB ilvN 3.1.21 3.1.21 3.1.21 3.1.21 3.1.21 3.1.21 3.1.21 3.1.21 3.1.21 3508199 3509746 3511753 3512700 3512960 3514746 3850918 3851123 3852815 3509743 3511596 3512682 3512960 3514606 3514844 3851016 3852811 3853105 STY1575 STY3741 birA 3.2.02 3.2.02 1525091 3592550 1525786 3593512 STY4287 STY0826 bioH bioA 3.2.02 3.2.02 4161921 823390 4162691 824679 STY0827 STY0828 STY0829 STY0830 bioB bioF bioC bioD 3.2.02 3.2.02 3.2.02 3.2.02 824766 825803 826944 827692 825806 826960 827699 828378 btuR cobT 3.2.03 3.2.03 1289991 2054034 1290581 2055104 acetolactate synthase isozyme III large subunit acetolactate synthase isozyme III small subunit ketol-acid reductoisomerase LysR-family regulatory protein for ilvC expression threonine deaminase dihydroxyacid dehydratase branched-chain amino-acid aminotransferase acetohydroxy acid synthase II, small subunit acetolactate synthase large subunit ilvGMEDA operon attenuator peptide ilvBN operon attenuator peptide acetohydroxy acid synthase I, small subunit acetohydroxy acid synthase I, small subunit Enterochelin STY0627 STY0631 STY0639 STY0640 STY0641 STY0642 Folic acid Biotin putative dethiobiotin synthetase bifunctional protein: biotin operon repressor and biotin-[acetyl-CoA carboxylase] synthetase putative biotin biosynthesis protein adenosylmethionine-8-amino-7oxononanoate aminotransferase biotin synthetase 8-amino-7-oxononanoate synthase biotin synthesis protein BioC dethiobiotin synthetase Cobalamin STY1332 STY2219 STY2220 STY2221 cobS cobU 3.2.03 3.2.03 2055131 2055871 2055874 2056416 COB(I) alamin adenosyltransferase nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyl transferase cobalamin (5'-phosphate) synthase cobinamide kinase and guanylyltransferase Heme, porphyrin STY1902 STY1904 STY0223 STY2688 STY3257 hemA hemM hemL hemF 3.2.06 3.2.06 3.2.06 3.2.06 3.2.06 1796056 1797626 234219 2521420 3118798 1797312 1798249 235499 2522319 3119934 STY3573 STY3621 STY3622 STY3623 hemG hemC hemD hemX 3.2.06 3.2.06 3.2.06 3.2.06 3423822 3474982 3475920 3476682 3424367 3475923 3476660 3477851 glutamyl-tRNA reductase outer membrane lipoprotein glutamate-1-semialdehyde 2,1-aminomutase coproporphyrinogen III oxidase possible oxygen-independent coproporphyrinogen III oxidase protoporphyrinogen oxidase porphobilinogen deaminase uroporphyrinogen III synthase uroporphyrinogen III methylase STY3624 STY3718 STY3877 hemY hemE hemN 3.2.06 3.2.06 3.2.06 3477851 3567325 3732783 3479050 3568389 3734156 STY0404 STY4319 STY0533 hemB cysG hemH 3.2.06 3.2.06 3.2.06 415253 4200791 539940 416227 4202164 540902 Porphyrin biosynthetic protein uroporphyrinogen decarboxylase oxygen-independent coproporphyrinogen III oxidase delta-aminolevulinic acid dehydratase siroheme synthase ferrochelatase Pyridine nucleotide STY1010 STY0167 STY1803 STY2834 pncB nadC nadE nadB 3.2.11 3.2.11 3.2.11 3.2.11 1007350 171520 1722307 2696031 1008552 172413 1723134 2697653 nicotinate phosphoribosyltransferase nicotinate-nucleotide pyrophosphorylase NH3-dependent NAD synthetase L-aspartate oxidase (quinolinate synthetase B). quinolinate synthetase A protein STY0797 nadA 3.2.11 794269 795312 STY0106 pdxA 3.2.12 103285 104274 STY1674 STY2601 STY2824 pdxH pdxB pdxJ 3.2.12 3.2.12 3.2.12 1603370 2437375 2686529 1604026 2438511 2687260 STY1340 STY1696 STY3373 ribA ribE ribB 3.2.13 3.2.13 3.2.13 1301009 1622537 3215354 1301599 1623178 3216007 STY0455 STY0456 ribD ribH 3.2.13 3.2.13 462053 463245 463156 463715 thiD 3.2.14 3.2.14 3.2.14 2205844 2206631 2321227 2206644 2207428 2322279 phosphomethylpyrimidine kinase hydroxyethylthiazole kinase thiamine biosynthesis protein 3.2.14 3.2.14 3.2.14 3.2.14 3.2.14 3.2.14 3.2.14 3.2.14 3.2.14 3570148 3572043 3572671 3573437 3573612 3574379 464234 470077 478436 3572043 3572678 3573429 3573610 3574382 3575512 465211 471525 479026 thiamine biosynthesis protein thiamine-phosphate pyrophosphorylase thiamine biosynthesis protein thiamine biosynthesis protein thiamine biosynthesis protein thiamine biosynthesis protein thiamine-monophosphate kinase thiamine biosynthesis protein ThiI 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein Lipoate Pyridoxine STY4923 STY0683 STY0686 lplA lipA lipB 3.2.07 3.2.07 3.2.07 4783207 679625 682051 4784223 680590 682626 lipoate-protein ligase A lipoic acid synthetase lipoate-protein ligase B (lipoate biosynthesis protein B) Menaquinone, ubiquinone STY1905 STY2505 STY2535 STY2536 STY2537 STY2540 STY2541 STY3213 STY3484 STY3587 STY3589 ipk ubiG menE menC menB menD menF visB ispB aarF ubiE 3.2.08 3.2.08 3.2.08 3.2.08 3.2.08 3.2.08 3.2.08 3.2.08 3.2.08 3.2.08 3.2.08 1798246 2337977 2369264 2370628 2371590 2373217 2374973 3080990 3327871 3439205 3441457 1799097 2338705 2370631 2371590 2372447 2374887 2376268 3082168 3328842 3440845 3442212 STY3780 STY3781 STY4429 STY4430 STY0462 menA menG ubiC ubiA ispA 3.2.08 3.2.08 3.2.08 3.2.08 3.2.08 3646348 3647370 4299821 4300332 468725 3647277 3647855 4300318 4301204 469624 isopentenyl monophosphate kinase 3-demethylubiquinone-9 3-methyltransferase O-succinylbenzoic acid-CoA ligase O-succinylbenzoate-CoA synthase naphthoate synthase menaquinone biosynthesis protein isochorismate synthase 2-octaprenyl-6-methoxyphenol hydroxylase octaprenyl-diphosphate synthase ubiquinone biosynthesis protein ubiquinone/menaquinone biosynthesis methyltransferase UbiE menaquinone biosynthetic protein menaquinone biosynthesis protein chorismate lyase 4-hydroxybenzoate octaprenyl transferase geranyltranstransferase Molybdopterin STY3077 3.2.09 2941776 2942138 STY3886 mobA 3.2.09 3742558 3743142 STY3887 mobB 3.2.09 3743139 3743654 STY0836 STY0837 STY0838 STY0839 STY0840 STY0008 STY0884 STY0885 moaA moaB moaC moaD moaE mog moeB moeA 3.2.09 3.2.09 3.2.09 3.2.09 3.2.09 3.2.09 3.2.09 3.2.09 835204 836215 836730 837202 837455 8729 877295 878044 836193 836727 837215 837453 837907 9319 878044 879285 putative 6-pyruvoyl tetrahydrobiopterin synthase molybdopterin-guanine dinucleotide biosynthesis protein A molybdopterin-guanine dinucleotide biosynthesis protein B molybdenum cofactor biosynthesis protein A molybdenum cofactor biosynthesis protein B molybdenum cofactor biosynthesis protein C molybdopterin converting factor, subunit 1 molybdopterin converting factor, subunit 2 molybdopterin biosynthesis Mog protein molybdopterin biosynthesis MoeB protein molybdopterin biosynthesis MoeA protein Pantothenate STY0198 STY0199 STY0200 panD panC panB 3.2.10 3.2.10 3.2.10 207905 208380 209360 208285 209234 210154 STY3740 coaA 3.2.10 3591565 3592515 aspartate 1-decarboxylase pantoate:beta-alanine ligase 3-methyl-2-oxobutanoate hydroxymethyltransferase pantothenate kinase pyridoxal phosphate biosynthetic protein PdxA pyridoxamine 5'-phosphate oxidase erythronate-4-phosphate dehydrogenase putative pyridoxal phosphate biosynthetic protein Riboflavin GTP cyclohydrolase II riboflavin synthase alpha chain 3,4-dihydroxy-2-butanone 4-phosphate synthase riboflavin biosynthesis protein RibD 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase beta chain) Thiamin STY2375 STY2376 STY2492 STY3721 STY3722 STY3723 STY3724 STY3725 STY3726 STY0458 STY0464 STY0472 yojL, apbE thiC thiE thiF thiS thiG thiH thiJ Thioredoxin, glutaredoxin, glutathione STY1203 STY1671 STY2842 STY2930 STY2944 STY3248 STY3639 STY4093 STY4205 STY4260 STY0905 grxB gst yfiG, trxC nrdH gshA gshB trxA grxC gor ggt grxA 3.2.15 3.2.15 3.2.15 1160625 1600615 2704254 1161272 1601220 2704673 glutaredoxin 2 glutathione S-transferase thioredoxin 2 3.2.15 3.2.15 3.2.15 3.2.15 3.2.15 3.2.15 3.2.15 3.2.15 2804753 2819830 3112625 3496464 3952338 4070227 4123472 899487 2804998 2821386 3113572 3496793 3952589 4071579 4125214 899750 putative glutaredoxin gamma-glutamylcysteine synthetase glutathione synthetase thioredoxin glutaredoxin 3 glutathione reductase gamma-glutamyltranspeptidase precursor glutaredoxin 1 biotin carboxyl carrier protein (BCCP) STY3559 STY2110 STY2373 STY2561 STY2570 STY2571 STY2573 accB yecD 3.2.16 3.3.0 3.3.0 3.3.0 3.3.0 3.3.0 3.3.0 3403698 1962167 2204123 2397018 2408171 2409117 2411356 3404168 1962733 2205088 2398232 2409124 2409947 2411628 STY2574 3.3.0 2411709 2412152 STY2844 STY3040 hyi 3.3.0 3.3.0 2705480 2908499 2708140 2909275 biotin carboxyl carrier protein putative hydrolase putative sugar kinase putative aminotransferase putative transketolase C-terminal section putative transketolase N-terminal section putative sugar phosphotransferase component II B putative sugar phosphotransferase component II A putative acyl-CoA synthetase putative hydroxypyruvate isomerase epd yabF 3.3.00 3.3.00 3095113 98069 3096159 98599 D-erythrose 4-phosphate dehydrogenase putative NAD(P)H oxidoreductase STY4401 STY4402 STY4403 STY4404 aceB aceA aceK iclR 3.3.05 3.3.05 3.3.05 3.3.05 4264737 4266370 4267775 4269601 4266338 4267674 4269556 4270425 malate synthase A isocitrate lyase isocitrate dehydrogenase kinase/phosphatase acetate operon repressor 3.3.06 3.3.06 4231386 4231652 4231580 4232128 bacterioferritin-associated ferredoxin bacterioferritin 4133883 4214765 4134416 4215634 putative gluconokinase phosphoribulokinase 3619808 3620911 glycerol dehydrogenase 3.3.09 3.3.09 3.3.09 3.3.09 3.3.09 2542737 2543707 3087302 3100337 7665 2543687 2545707 3087961 3102328 8618 transaldolase A transketolase 2 ribose 5-phosphate isomerase transketolase transaldolase B Incorporation metal ions STY4354 STY4355 yheA bfr Misc. glucose metabolism STY4269 STY4333 gntK prkB 3.3.07 3.3.07 other Misc. glycerol metabolism STY3228 STY0100 2'-Deoxyribonucleotide metabolism STY3759 gldA 3.3.08 Non-oxidative branch, pentosepwy STY1239 STY2334 STY2506 tmk dcd nrdA 3.3.01 3.3.01 3.3.01 1193288 2164849 2339060 1193929 2165430 2341345 STY2507 nrdB 3.3.01 2341458 2342588 STY3142 STY4063 thyA dut 3.3.01 3.3.01 3014265 3923120 3015059 3923575 STY4791 nrdD 3.3.01 4648630 4650768 STY0956 trxB 3.3.01 945765 946733 thymidylate kinase deoxycytidine triphosphate deaminase ribonucleoside-diphosphate reductase 1 alpha chain ribonucleoside-diphosphate reductase 1 beta chain thymidylate synthetase deoxyuridine 5'-triphosphate nucleotidohydrolase anaerobic ribonucleoside-triphosphate reductase thioredoxin reductase STY2710 STY2711 STY3219 STY3236 STY0007 talA tktB rpiA tktA talB Nucleotide hydrolysis STY0230 dgt 3.3.10 239853 241370 STY4445 aphA 3.3.10 4315807 4316520 deoxyguanosinetriphosphate triphosphohydrolase class B acid phosphatase precursor Nucleotide interconversions Amino sugars 3.3.11 3.3.11 3.3.11 1959515 2165521 239070 1959967 2166162 239768 DATP pyrophosphohydrolase uridine kinase MTA/SAH nucleosidase STY2658 STY0241 STY2931 STY2932 ntpA udk mtn, pfs xapA pyrH nrdI nrdE 3.3.11 3.3.11 3.3.11 3.3.11 2495466 253160 2804995 2805378 2496299 253885 2805405 2807522 KHG/KDPG aldolase STY2933 nrdF 3.3.11 2807533 2808492 6-phosphogluconate dehydratase gluconate utilization operon repressor STY3082 STY4790 pyrG nrdG 3.3.11 3.3.11 2945697 4648045 2947334 4648509 STY0664 rnk 3.3.11 664173 664583 xanthosine phosphorylase uridine 5'-monophosphate kinase NrdI protein ribonucleoside-diphosphate reductase 2 alpha chain ribonucleoside-diphosphate reductase 2 beta chain CTP synthetase anaerobic ribonucleoside-triphosphate reductase activating protein regulator of nucleoside diphosphate kinase 3.3.12 4756264 4758555 putative phosphoglycerol transferase 3.3.13 1124406 1125260 PhoH protein (phosphate starvationinducible protein PsiH) STY0719 STY0720 STY0721 nagD nagC nagA 3.3.02 3.3.02 3.3.02 716873 717672 718897 717625 718892 720051 STY0722 nagB 3.3.02 720111 720911 NagD protein N-acetylglucosamine repressor N-acetylglucosamine-6-phosphate deacetylase glucosamine-6-phosphate isomerase 3.3.03 1942582 1943223 3.3.03 3.3.03 1943261 4132749 1945072 4133744 Entner-Douderoff STY2091 STY2093 STY4268 eda, kdgA edd gntR Gluconeogenesis STY1494 sfcA 3.3.04 1451664 1453397 STY1761 ppsA, pps pckA fbp 3.3.04 1682538 3.3.04 3.3.04 4172409 4634604 STY4296 STY4774 STY2108 STY2335 STY0229 Oligosaccharides 1684916 NAD-linked malic enzyme; malate oxidoreductase phosphoenolpyruvate synthase 4174028 4635602 phosphoenolpyruvate carboxykinase fructose-1,6-bisphosphatase Phosphorus compounds STY4894 STY1162 Glyoxylate bypass mdoB phoH STY0157 STY2742 STY2743 STY3598 STY3602 STY0417 STY4519 STY4773 mutT ppk ppx pldB pldA psiF phoN ppa 3.3.13 3.3.13 3.3.13 3.3.13 3.3.13 3.3.13 3.3.13 3.3.13 162968 2578652 2580723 3452617 3457001 429218 4408055 4633847 163363 2580718 2582264 3453633 3457870 429538 4408807 4634377 7,8-dihydro-8-oxoguanine-triphosphatase polyphosphate kinase exopolyphosphatase lysophospholipase L2 detergent-resistant phospholipase A phosphate starvation-inducible protein PsiF nonspecific acid phosphatase precursor inorganic pyrophosphatase spermidine N1-acetyltransferase S-adenosylmethionine decarboxylase proenzyme spermidine synthase agmatine ureohydrolase biosynthetic arginine decarboxylase ornithine decarboxylase (pseudogene) glutathionylspermidine synthetase/amidase ornithine decarboxylase, inducible (pseudogene) STY4258 STY4685 STY4742 STY4744 STY0461 STY4903 STY0506 STY0566 sgbH ugpQ aspA sgaH sgaE dxs glnK hyi, gip 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 4122238 4547439 4602981 4604495 466839 4764702 513385 572484 4122978 4548875 4603631 4605181 468701 4765490 513723 573260 STY0652 dsbG 3.3.15 653380 654126 STY0670 STY0671 STY0672 STY0673 STY0067 STY0068 STY0069 STY0070 STY0071 STY0072 STY0806 citF citE citD citC citC2 citD2 citE2 citF2 citX2 citG2 galM 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 668594 670133 671038 671331 68633 69706 69996 70876 72396 72925 801935 670123 671041 671334 672356 69676 69999 70865 72396 72947 73833 802975 glycerophosphoryl diester phosphodiesterase aspartate ammonia-lyase putative hexulose-6-phosphate synthase probable class II aldolase 1-deoxyxylulose-5-phosphate synthase ferric iron reductase protein nitrogen regulatory protein P-II hydroxypyruvate isomerase, glyoxylateinduced protein thiol:disulfide interchange protein DsbG precursor citrate lyase alpha chain citrate lyase beta chain citrate lyase acyl carrier protein [citrate (pro-3S)-lyase] ligase [citrate (PRO-3S)-lyase] ligase citrate lyase acyl carrier protein citrate lyase beta chain citrate lyase alpha chain citx protein citg protein aldose 1-epimerase (mutarotase) 3.3.16 987917 988720 SmtA protein, putative methyltransferase Polyamine biosynthesis STY1561 STY0187 speG speD 3.3.14 3.3.14 1510962 196389 1511522 197183 STY0188 STY3238 STY3240 STY3270 STY3310 STY0739 speE speB speA speC gsp speF 3.3.14 3.3.14 3.3.14 3.3.14 3.3.14 3.3.14 197204 3103463 3104611 3129168 3158238 739365 198064 3104383 3106587 3131292 3160094 741433 Pool, multipurpose conversions of intermed. met'm STY1098 STY1153 mgsA agp 3.3.15 3.3.15 1077560 1113790 1078018 1115031 STY1672 STY1686 STY1687 STY1750 STY2511 pdxY nemA gloA glpQ 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 STY2672 STY2911 STY2912 STY3122 pdxK gabD gabT gcvA 3.3.15 3.3.15 3.3.15 3.3.15 2508373 2793029 2794492 2989810 2509239 2794477 2795775 2990727 STY0282 STY3209 STY3210 STY3211 STY3243 STY3385 STY3510 gloB gcvP gcvH gcvT metK folB gltB 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 299187 3074659 3077695 3078110 3107377 3228987 3349044 299942 3077532 3078087 3079204 3108531 3229349 3353504 STY3511 STY3784 STY3785 STY3786 STY4086 STY4120 gltD glpK glpX fpr kbl yiaR, sgbU yiaQ, 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3.3.15 3353514 3649581 3651108 3652305 3944023 3984123 3354932 3651086 3652208 3653051 3945219 3984983 methylglyoxal synthase glucose-1-phosphatase precursor (G1Pase), secreted pyridine nucleotide transhydrogenase subunit-beta pyridine nucleotide transhydrogenase subunit-alpha putative ferredoxin-like protein, cytoplasmic membrane pyridoxamine kinase N-ethylmaleimide reductase lactoylglutathione lyase putative amintransferase glycerophosphoryl diester phosphodiesterase periplasmic precursor pyridoxine kinase succinate-semialdehyde dehydrogenase 4-aminobutyrate aminotransferase regulatory protein for glycine cleavage pathway probable hydroxyacylglutathione hydrolase glycine dehydrogenase (decarboxylating) glycine cleavage system H protein aminomethyltransferase S-adenosylmethionine synthetase dihydroneopterin aldolase glutamate synthase [NADPH] large chain precursor glutamate synthase (NADPH) small chain glycerol kinase putative glycerol metabolic protein ferredoxin--NADP reductase 2-amino-3-ketobutyrate coenzyme A ligase putative sugar-phosphate isomerase STY1588 pntB 3.3.15 1534318 1535706 STY1589 pntA 3.3.15 1535717 1537246 3.3.15 1592799 1593377 1601223 1612708 1613874 1669043 2345190 1601909 1613805 1614281 1670263 2346260 3.3.15 3984976 3985638 putative hexulose-6-phosphate synthase STY1664 STY4121 S-adenosyl methionine STY0993 smtA Salvage of nucleosides and nucleotides STY0103 STY1301 STY1658 STY1821 STY0192 STY2211 STY2413 STY2739 STY3514 STY3591 STY3643 STY3644 STY0362 STY4761 STY4918 STY4919 STY4920 apaH tdk add pncA, nam hpt amn cdd upp codA udp STY0527 STY0535 STY0060 gpt cpdB deoC deoA deoB, drm, thyR deoD, pup apt gsk yaaF STY0706 STY0897 ybeK deoR STY4921 3.3.17 3.3.17 3.3.17 3.3.17 101228 1259079 1588650 1741482 102076 1259696 1589651 1742138 bis(5'-nucleosyl)-tetraphosphatase thymidine kinase adenosine deaminase pyrazinamidase/nicotinamidase 3.3.17 3.3.17 3.3.17 3.3.17 3.3.17 3.3.17 203004 2048039 2244749 2575749 3357600 3443878 203540 2049493 2245633 2576375 3358880 3444639 3.3.17 3.3.17 3.3.17 3.3.17 3.3.17 3.3.17 3.3.17 3501966 3502694 371982 4617932 4777978 4778898 4780272 3502697 3503437 372440 4619875 4778775 4780220 4781495 hypoxanthine phosphoribosyltransferase AMP nucleosidase cytidine deaminase uracil phosphoribosyltransferase cytosine deaminase uridine phosphorylase, uridine phosphorylase putative membrane transport protein probable uridine phosphorylase xanthine-guanine phosphoribosyltransferase 2',3'-cyclic-nucleotide 2'-phosphodiesterase deoxyribose-phosphate aldolase thymidine phosphorylase phosphopentomutase 3.3.17 4781705 4782424 purine nucleoside phosphorylase 3.3.17 3.3.17 3.3.17 533092 542023 60161 533643 543327 61081 3.3.17 3.3.17 702239 891157 703174 891915 adenine phosphoribosyltransferase inosine-guanosine kinase putative nucleoside hydrolase (IUNH family) probable nucleoside hydrolase deoxyribose operon repressor Sugar-nucleotide biosynthesis, conversions STY2289 STY2304 STY2305 STY2306 STY2307 STY2308 udg rfbC rfbA rfbD rfbB galF 3.3.18 3.3.18 3.3.18 3.3.18 3.3.18 3.3.18 2114739 2133107 2133659 2134585 2135484 2136946 2115905 2133658 2134537 2135484 2136569 2137839 STY2317 manC, cpsB, rfbM fcl, wcaG, yefB gmd, yefA 3.3.18 2146457 2147899 STY2320 STY2321 UDP-glucose 6-dehydrogenase dTDP-4-dehydrorhamnose 3,5-epimerase TDP-glucose pyrophosphorylase dTDP-4-dehydrorhamnose reductase dTDP-glucose 4,6-dehydratase UTP-glucose-1-phosphate uridylyltransferase mannose-1-phosphate guanylyltransferase 3.3.18 2149592 2150557 GDP-fucose synthetase 3.3.18 2150560 2151681 GDP-mannose 4,6-dehydratase undecaprenyl pyrophosphate synthetase glucosamine--fructose-6-phosphate aminotransferase UDP-sugar hydrolase ushA (pseudogene) STY0244 STY3917 glmS 3.3.18 3.3.18 256240 3778356 256998 3780185 STY0539 ushA 3.3.18 546660 548311 STY1111 3.3.19 1083598 1083927 STY2789 STY3058 STY3059 cysC cysN 3.3.19 3.3.19 3.3.19 2645566 2921921 2922513 2646780 2922526 2923952 STY3060 cysD 3.3.19 2923962 2924870 STY3074 cysH 3.3.19 2937019 2937753 STY3075 cysI 3.3.19 2937829 2939541 STY3076 cysJ 3.3.19 2939541 2941340 STY3370 STY0039 STY3771 assT 3.3.19 3.3.19 3.3.19 3212004 35339 3636785 3213800 37057 3638529 STY3808 STY0042 STY0043 STY4508 sbp 3.3.19 3.3.19 3.3.19 3.3.19 3670951 40128 41720 4400057 3671940 41621 42910 4400830 3.3.19 3.3.19 3.3.19 3.3.19 44308 4543876 4620142 96050 46023 4545579 4620882 97354 hypothetical protein in helD-serT intergenic region, putative sulfite reductase putative L-cysteine desulfurase adenosine 5-phosphosulfate kinase ATP sulfurylase (ATP:sulfate adenyltransferase) subunit ATP sulfurylase (ATP:sulfate adenyltransferase) 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase sulfite reductase (NADPH) hemoprotein alpha subunit sulfite reductase (NADPH) flavoprotein beta subunit probable arylsulfate sulfotransferase possible sulfatase putative arylsulfate sulfotransferase (pseudogene) periplasmic sulphate binding protein putative secreted sulfatase possible sulfatase regulatory protein putative dimethyl sulfoxide reductase subunit C possible sulfatase thiol:disulfide interchange protein DsbD cysQ protein puatative sulfatase 3.3.20 4728340 4729074 probable aspartate racemase STY3908 STY3909 STY3910 STY3911 STY3912 STY3913 STY3914 atpE atpF atpH atpA atpG atpD atpC 3.4.0 3.4.0 3.4.0 3.4.0 3.4.0 3.4.0 3.4.0 3769916 3770215 3770700 3771246 3772838 3773728 3775131 3770155 3770685 3771233 3772787 3773701 3775110 3775550 ATP synthase subunit C ATP synthase subunit B ATP synthase delta subunit ATP synthase alpha subunit ATP synthase gamma subunit ATP synthase beta subunit ATP synthase epsilon subunit STY2161 STY2692 STY2693 STY2694 STY2695 STY2696 eutK eutL eutC eutB eutA 3.4.1 3.4.1 3.4.1 3.4.1 3.4.1 3.4.1 2006277 2525375 2525882 2526551 2527466 2528839 2007263 2525869 2526541 2527447 2528827 2530242 STY2698 STY2699 eutG eutJ 3.4.1 3.4.1 2531584 2532761 2532771 2533600 STY2700 STY2701 eutE eutN, cchB eutD, eutI 3.4.1 3.4.1 2533611 2535026 2535014 2535715 3.4.1 2535756 2536772 putative deaminase ethanolamine utilization protein EutK ethanolamine utilization protein EutL ethanolamine ammonia-lyase light chain ethanolamine ammonia-lyase heavy chain putative ethanolamine utilization protein EutA putative alchohol dehydrogenase putative ethanolamine utilization protein EutJ putative aldehyde dehydrogenase putative ethanolamine utilization protein EutN putative phosphate acyltransferase STY2703 STY2704 3.4.1 3.4.1 2536769 2537563 2537566 2538252 STY2705 3.4.1 2538230 2538709 Amines Sulfur metabolism STY2702 STY0046 STY4682 STY4762 STY0098 dmsC dsbD cysQ amino acids STY4866 ATP-proton motive force interconversion STY3906 STY3907 atpI atpB 3.4.0 3.4.0 3768665 3769054 3769045 3769869 ATP synthase protein I. ATP synthase A chain STY2706 eutS 3.4.1 2538722 2539057 STY0470 phnW 3.4.1 476417 477520 STY0471 STY0080 phnX caiD 3.4.1 3.4.1 477530 81542 478339 82327 STY1159 STY1807 STY1808 STY1809 putA astE astB astD 3.4.2 3.4.2 3.4.2 3.4.2 1117687 1725032 1725993 1727525 1121649 1726000 1727336 1728811 STY1810 STY1811 STY1820 STY1930 STY1931 STY1956 STY2430 STY2806 STY3110 astA astC ansA dadX dadA sdaA sdaC cadA sdaB 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 1728808 1729833 1740439 1823207 1824291 1844980 2259039 2664037 2977657 1729842 1731059 1741455 1824277 1825589 1846344 2260406 2666181 2979024 STY3259 STY3298 STY3422 STY3424 STY3427 STY3428 ansB 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3121165 3144822 3262502 3266264 3268890 3269977 3122211 3146306 3263866 3267472 3269879 3270915 putative cobalamin adenosyltransferase putative ethanolamine utilization protein EutQ putative ethanolamine utilization protein EutP putative ethanolamine utilization protein EutS 2-aminoethylphosphonate:pyruvate aminotransferase phosphonoacetaldehyde phosphonohydrolase carnitine racemase Amino acids tdcG tdcD tdcB tdcA proline dehydrogenase (proline oxidase) succinylglutamate desuccinylase succinylarginine dihydrolase succinylglutamic semialdehyde dehydrogenase arginine N-succinyltransferase succinylornithine transaminase L-Asparaginase I alanine racemase D-amino acid dehydrogenase L-serine deaminase 1 putative L-serine dehydratase lysine decarboxylase L-serine dehydratase 2 (L-serine deaminase 2) L-asparaginase possible aldehyde dehydrogenase L-serine dehydratase propionate kinase catabolic threonine dehydratase TDC operon transcriptional activator STY3977 STY3979 STY4087 STY4203 STY4495 STY4804 STY4805 STY0820 STY0821 STY0822 STY0823 STY0824 STY0930 dsdA dsdC tdh adi hutI hutG hutC hutU hutH ybjU 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 3842953 3845856 3945229 4069850 4383814 4664461 4665404 816437 817657 818643 819564 821251 920767 3844275 3846779 3946254 4070180 4386084 4665393 4666624 817660 818598 819368 821249 822771 921768 D-serine dehydratase D-serine deaminase activator threonine 3-dehydrogenase L-asparaginase (pseudogene) arginine decarboxylase carbamate kinase arginine deiminase imidazolonepropionase formiminoglutamase histidine utilization repressor urocanate hydratase histidine ammonia-lyase L-allo-threonine aldolase Carbon compounds STY1130 hpaC 3.4.3 1095652 1096164 STY1131 STY1132 3.4.3 3.4.3 1096182 1097595 1097489 1098035 STY1134 hpaB hpcR, hpaR hpaG 3.4.3 1098310 1099599 STY1136 hpcC 3.4.3 1099596 1101061 STY1137 STY1138 hpcB hpcD 3.4.3 3.4.3 1101063 1101924 1101914 1102304 STY1139 STY1140 3.4.3 3.4.3 1102448 1103262 1103251 1104053 STY1142 hpcG hpcH, hpaI hpaA 3.4.3 1105511 1106407 STY0118 STY0119 STY0120 STY0121 STY1298 STY1302 STY1565 araD araA araB araC galU adh dmsA1 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 118656 119492 121005 123055 1256963 1259893 1512843 119351 120994 122714 123900 1257871 1262571 1515281 STY1566 dmsA2 3.4.3 1515383 1517818 STY1567 dmsB 3.4.3 1517829 1518446 STY1568 dmsC 3.4.3 1518448 1519302 STY1655 STY1657a STY1797 STY0191 STY2243 manA malY celF gcd pduA 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 1585158 1588293 1716955 200408 2073423 1586333 1588424 1718310 202798 2073707 STY2244 STY2245 STY2246 STY2247 STY2248 pduB pduC pduD pduE pduG 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 2073815 2074535 2076210 2076899 2077627 2074516 2076199 2076884 2077420 2079459 4-hydroxyphenylacetate 3-monooxygenase coupling protein 4-hydroxyphenylacetate 3-monooxygenase homoprotocatechuate degradative operon repressor 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7dioate isomerase 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (pseudogene) 3,4-dihydroxyphenylacetate 2,3-dioxygenase 5-carboxymethyl-2-hydroxymuconate deltaisomerase 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein L-ribulose-5-phosphate 4-epimerase L-arabinose isomerase L-ribulokinase arabinose operon regulatory protein glucose-1-phosphate uridylyltransferase alcohol dehydrogenase putative dimethyl sulphoxide reductase subunit putative dimethyl sulphoxide reductase subunit putative dimethyl sulphoxide reductase subunit putative dimethyl sulphoxide reductase subunit mannose-6-phosphate isomerase putative aminotransferase (fragment) phospho-beta-glucosidase B glucose dehydrogenase putative propanediol utilization protein PduA putative propanediol utilization protein PduB glycerol dehydratase large subunit diol dehydratase medium subunit diol dehydratase small subunit PduG protein STY2249 STY2250 STY2251 pduH pduJ pduK 3.4.3 3.4.3 3.4.3 2079449 2079819 2080098 2079799 2080094 2080580 STY2254 pduN 3.4.3 2081704 2081978 STY2256 pduP 3.4.3 2082995 2084389 STY2257 STY2259 STY2260 pduQ pduT 3.4.3 3.4.3 3.4.3 2084401 2086868 2087422 2085513 2087422 2087772 STY2261 pduV 3.4.3 2087777 2088229 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 2088214 221438 2226756 2237354 2239932 2353637 2089428 222142 2229053 2238547 2240969 2354440 3.4.3 3.4.3 3.4.3 3.4.3 2402961 2404240 2478574 2833113 2404163 2406384 2479539 2833892 3.4.3 3.4.3 3.4.3 3.4.3 2909280 2966078 2967439 2980042 2909918 2967418 2968779 2981190 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 2981207 2983758 2985634 2987054 2987534 3027580 3034527 3035343 3071829 3152022 3153317 3154801 3273610 3274526 3275827 3277638 3279763 3280628 3283987 3287473 3288627 3292911 3316930 3329075 3655255 3684525 3685526 3686650 3688116 2981854 2985488 2987052 2987476 2988244 3028608 3035288 3036179 3073262 3153206 3154789 3156213 3274494 3275296 3277398 3278585 3280617 3281542 3285258 3288516 3289400 3293501 3318267 3329362 3656019 3685373 3686362 3688119 3689375 STY2262 STY0212 STY2396 STY2405 STY2408 STY2519 STY2567 STY2568 STY2644 STY2956 STY3041 STY3098 STY3099 STY3112 STY3113 STY3116 STY3117 STY3118 STY3119 STY3155 STY3162 STY3163 STY3207 STY3306 STY3307 STY3308 STY3430 STY3431 STY3432 STY3433 STY3435 STY3436 STY3439 STY3444 STY3445 STY3449 STY3472 STY3485 STY3790 STY3824 STY3825 STY3826 STY3827 sfsA bglX ackA pta glk srlD, gutD ygcX ygcY fucO fucA fucI fucK fucU fucR galR kduD kduI bglA uxuA uxuB uxaC garR garL garD gatY gatD gatR nlp rhaR rhaS rhaB rhaA PduH protein putative propanediol utilization protein PduJ putative propanediol utilization protein PduK putative propanediol utilization protein PduN (pseudogene) putative CoA-dependent proprionaldehyde dehydrogenase putative propanol dehydrogenase putative propanediol utilization protein PduT putative propanediol utilization protein PduU putative propanediol utilization protein PduV putative propionate kinase sugar fermentation stimulation protein periplasmic beta-glucosidase precursor putative n-hydroxybenzoate hydroxylase putative gentisate 1,2-dioxygenase putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase acetate kinase phosphate acetyltransferase glucokinase sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase) possible sugar aldolase probable glucarate dehydratase 1 probable glucarate dehydratase 2 1,2-propanediol oxidoreductase (lactaldehyde reductase) fuculose-1-phosphate aldolase L-fuculose isomerase L-fuculose kinase fuscose operon fucU protein l-fucose operon activator galactose operon repressor 2-keto-3-deoxygluconate oxidoreductase 5-keto-4-deoxyuronate isomerase 6-phospho-beta-glucosidase D-mannonate hydrolase D-mannonate oxidoreductase uronate isomerase (glucuronate isomerase) 2-hydroxy-3-oxopropionate reductase 5-keto-4-deoxy-D-glucarate aldolase D-galactarate dehydratase possible carbohydrate kinase tagatose-bisphosphate aldolase possible carbohydrate kinase putative sugar kinase (pseudogene) galactitol-1-phosphate dehydrogenase galactitol utilization operon repressor probable phosphoheptose isomerase PGM/PMM-family protein Ner-like regulatory protein putative ribulose-phosphate 3-epimerase L-rhamnose operon transcriptional activator L-rhamnose operon regulatory protein rhamnulokinase L-rhamnose isomerase STY3828 rhaD 3.4.3 3689433 3690259 STY3854 STY3891 STY3892 STY3894 STY3989 STY4109 yihV rbsR rbsK rbsB mtlR 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3709607 3751662 3752664 3753726 3854206 3968959 3710503 3752660 3753593 3754616 3855126 3969549 STY4110 STY4116 STY4122 STY4137 STY4138 STY4191 STY4200 STY0399 mtlD aldB lyxK xylA xylB kdgK treF prpR 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3969546 3978586 3985635 4001081 4002503 4054908 4066194 407663 3970694 3980124 3987131 4002403 4003957 4055837 4067843 409288 STY0400 prpB 3.4.3 409554 410441 STY0401 STY0402 STY0403 STY4281 STY4282 STY4313 STY4314 STY4497 STY0439 STY4793 STY0564 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 410564 411771 413263 4150971 4154270 4191923 4192593 4387518 448389 4651177 569787 411733 413222 415149 4153676 4156663 4192600 4193351 4388870 450206 4652829 570605 3.4.3 3.4.3 3.4.3 3.4.3 570690 573361 579922 581945 572471 574239 581070 583180 3.4.3 583202 584251 ureidoglycolate dehydrogenase STY0580 STY0728 STY0736 STY0807 STY0078 STY0808 STY0809 STY0079 STY0081 prpC prpD prpE malT malP rpe gph melA malZ treC allR, glxA3 gcl garR glxK allC, glxB7 allD, glxB8 arcC citB pgm galK caiF galT galE caiE caiC rhamnulose-1-phosphate aldolase (pseudogene) putative sugar kinase ribose operon repressor ribokinase D-ribose-binding periplasmic protein putative carbohydrate kinase mannitol operon repressor (mannitol repressor protein) mannitol-1-phosphate dehydrogenase aldehyde dehydrogenase B putative L-xylulose kinase D-xylose isomerase xylulose kinase 2-dehydro-3-deoxygluconokinase cytoplasmic trehalase propionate catabolism operon regulatory protein putative carboxyvinyl-carboxyphosphonate phosphorylmutase methylcitrate synthase PrpD protein PrpE protein MalT regulatory protein maltodextrin phosphorylase ribulose-phosphate 3-epimerase phosphoglycolate phosphatase alpha-galactosidase maltodextrin glucosidase trehalose-6-phosphate hydrolase negative regulator of allantoin and glyoxylate utilization operons glyoxylate carboligase 2-hydroxy-3-oxopropionate reductase glycerate kinase allantoate amidohydrolase 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 588325 728712 735744 802969 80361 804120 805177 80834 82381 589218 729851 737384 804117 80756 805166 806193 81430 83934 STY0082 STY0083 caiB caiA 3.4.3 3.4.3 83997 85326 85214 86468 STY0084 STY0085 STY0086 STY0087 STY0088 STY0931 caiT fixA fixB fixC fixX poxB 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 86503 88501 89287 90278 91561 921807 88020 89271 90228 91564 91848 923525 carbamate kinase citrate utilization protein B phosphoglucomutase galactokinase transcriptional activator CaiF galactose-1-phosphate uridylyltransferase UDP-glucose 4-epimerase carnitine operon protein CaiE probable crotonobetaine/carnitine-CoA ligase L-carnitine dehydratase probable carnitine operon oxidoreductase CaiA probable carnitine transporter FixA protein FixB protein FixC protein ferredoxin like protein FixX pyruvate dehydrogenase STY0565 STY0567 STY0573 STY0575 STY0576 Fatty acids STY1948 STY2620 fadD 3.4.4 3.4.4 1836823 2453074 1838508 2455221 long-chain-fatty-acid--CoA ligase putative fatty acid oxidation complex alpha subunit putative 3-ketoacyl-CoA thiolase large (alpha) subunit of the fatty acidoxidizing multienzyme complex small (beta) subunit of the fatty acidoxidizing multienzyme complex putative lipase probable acyl Co-A dehydrogenase STY2621 STY3577 fadB 3.4.4 3.4.4 2455221 3428004 2456531 3430193 STY3578 fadA 3.4.4 3430203 3431366 STY3846 STY4733 aidB 3.4.4 3.4.4 3703910 4595156 3704839 4596778 3.4.5 1004375 1005590 3.4.6 569227 569708 putative diaminopropionate ammonia-lyase (pseudogene) ureidoglycolate hydrolase (pseudogene) 3.4.6 577181 578542 putative allantoinase NADH dehydrogenase uptake hydrogenase small subunit uptake hydrogenase large subunit (pseudogene) Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC2 hydrogenase 1 maturation protease hydrogenase isoenzymes formation protein hydrogenase-1 operon protein HyaE2 hydrogenase-1 operon protein HyaF2 hydrogenase-1 small subunit (pseudogene) hydrogenase-1 large chain (nifE hydrogenase) probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit hydrogenase-1 operon protein HyaD hydrogenase-1 operon protein HyaE hydrogenase-1 operon protein HyaF D-lactate dehydrogenase NADH dehydrogenase I chain N NADH dehydrogenase I chain M NADH dehydrogenase I chain L NADH dehydrogenase I chain k NADH dehydrogenase I chain J NADH dehydrogenase I chain I NADH dehydrogenase I chain H NADH dehydrogenase I chain G NADH dehydrogenase I chain F NADH dehydrogenase I chain E NADH dehydrogenase I chain C; chain D NADH dehydrogenase I chain B NADH dehydrogenase I chain A NADH dehydrogenase operon transcriptional regulator flavodoxin II glycerol-3-phosphate dehydrogenase putative L-lactate dehydrogenase Other STY1006 STY0563 STY0571 allA, glxA2 allB Aerobic respiration STY1251 STY1523 STY1525 ndh hyaA2 hyaB2 3.5.1 3.5.1 3.5.1 1204119 1480110 1481216 1205423 1481213 1483018 STY1526 hyaC2 3.5.1 1482984 1483712 STY1527 STY1528 STY1529 STY1530 STY1913 STY1914 hyaD2 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 1483718 1484326 1484622 1485050 1806430 1807545 1484326 1484625 1485032 1486111 1807548 1809338 STY1915 hyaC 3.5.1 1809357 1810088 STY1916 STY1917 STY1918 STY2397 STY2546 STY2547 STY2548 STY2549 STY2550 STY2551 STY2552 STY2553 STY2554 STY2555 STY2556 STY2557 STY2558 STY2560 hyaD hyaE hyaF dld nuoN nuoM nuoL nuoK nuoJ nuoI nuoH nuoG nuoF nuoE nuoC nuoB nuoA lrhA 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 1810085 1810671 1811072 2229320 2379379 2380843 2382686 2384524 2384823 2385388 2385945 2386919 2389676 2391010 2391513 2393402 2394080 2395148 1810681 1811075 1811920 2231050 2380656 2382372 2384527 2384826 2385377 2385930 2386922 2389651 2391013 2391510 2393315 2394064 2394523 2396086 STY3201 STY4095 STY4102 fldB gpsA lctD, lldD 3.5.1 3.5.1 3.5.1 3067956 3953100 3959610 3068477 3954119 3960800 hyaE2 hyaF2 hyaA STY4103 STY4277 STY0481 STY0482 STY0483 STY0484 STY0485 lctR, lldR glpD cyoE cyoD cyoC cyoB cyoA 3.5.1 3960797 3961573 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 3.5.1 4147107 485502 486404 486733 487337 489339 4148615 486392 486733 487347 489328 490295 putative L-lactate dehydrogenase operon regulator aerobic glycerol-3-phosphate dehydrogenase cytochrome o ubiquinol oxidase C subunit cytochrome o ubiquinol oxidase C subunit cytochrome o ubiquinol oxidase subunit III cytochrome o ubiquinol oxidase subunit I cytochrome o ubiquinol oxidase subunit II Anaerobic respiration STY1285 narL 3.5.2 1239520 1240170 STY1286 STY1288 STY1289 STY1290 STY1291 STY1485 STY1486 STY1487 STY1488 STY1492 STY1493 STY2269 STY2270 narX narG narH narJ narI narV narW narY narZ fdnG adhP phsC phsB 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 1240163 1244084 1247824 1249356 1250066 1438211 1438888 1439583 1441124 1449249 1450372 2094093 2094854 1241959 1247827 1249359 1250066 1250743 1438891 1439583 1441127 1444852 1450391 1451382 2094857 2095432 STY2271 STY2472 phsA narP 3.5.2 3.5.2 2095447 2303653 2097723 2304300 STY2485 STY2513 napA glpA 3.5.2 3.5.2 2313369 2347856 2315855 2349484 STY2514 glpB 3.5.2 2349474 2350733 STY2515 glpC 3.5.2 2350730 2351920 3.5.2 3.5.2 3.5.2 3.5.2 2624844 2625707 2626509 2627135 2625707 2626516 2627138 2629512 3.5.2 3.5.2 3.5.2 3.5.2 2650555 2651602 2652431 2840627 2651598 2652420 2653444 2842867 STY2965 STY2976 STY2978 asrA asrB asrC hypf, hydA hydN hypA hypC 3.5.2 3.5.2 3.5.2 2843013 2852688 2853977 2843558 2853044 2854249 STY2979 hypD 3.5.2 2854249 2855370 STY2980 hypE 3.5.2 2855409 2856377 STY3314 STY3315 STY3316 STY3317 STY3318 hybG hybF hybE hybD hybC 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3163093 3163369 3163703 3164184 3164678 3163341 3163710 3164191 3164678 3166381 STY2772 STY2773 STY2774 STY2775 STY2794 STY2795 STY2796 STY2964 nitrate/nitrite response regulator protein NarL nitrate/nitrite sensor protein NarX respiratory nitrate reductase 1 alpha chain respiratory nitrate reductase 1 beta chain respiratory nitrate reductase 1 delta chain respiratory nitrate reductase 1 gamma chain respiratory nitrate reductase 2 gamma chain respiratory nitrate reductase 2 delta chain respiratory nitrate reductase 2 beta chain respiratory nitrate reductase 2 alpha chain formate dehydrogenase (pseudogene) alcohol dehydrogenase thiosulfate reductase cytochrome b subunit thiosulfate reductase electron transport protein PhsB thiosulfate reductase precursor nitrate/nitrite response regulator protein NarP probable nitrate reductase anaerobic glycerol-3-phosphate dehydrogenase subunit A anaerobic glycerol-3-phosphate dehydrogenase subunit B anaerobic glycerol-3-phosphate dehydrogenase subunit C putative polyferredoxin putative anaerobic reductase component putative anaerobic reductase component putative anaerobic reductase component (pseudogene) anaerobic sulfite reductase subunit A anaerobic sulfite reductase subunit B anaerobic sulfite reductase subunit C hydrogenase maturation protein electron transport protein HypA protein hydrogenase isoenzymes formation protein HypC hydrogenase isoenzymes formation protein HypD hydrogenase isoenzymes formation protein HypE hydrogenase-2 component protein hydrogenase-2 component protein hydrogenase-2 component protein hydrogenase-2 component protein hydrogenase-2 large subunit STY3319 hybB 3.5.2 3166378 3167556 STY3320 STY3321 STY3423 STY3838 STY3839 STY3841 STY3842 STY3843 STY3951 hybA hyb0 tdcE fdhD fdoG fdoH fdoI fdhE torS 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3167546 3168535 3263936 3696497 3697528 3700591 3701490 3702122 3819535 3168532 3169653 3266230 3697300 3700578 3701493 3702125 3703051 3822270 STY3952 STY3954 torT torR 3.5.2 3.5.2 3822350 3823363 3823390 3824057 STY3955 STY3956 STY3957 STY4280 torC torA torD glpR, glpR nirD nirB nrfB nrfC nrfD 3.5.2 3.5.2 3.5.2 3.5.2 3824187 3825362 3827907 4150139 3825372 3827914 3828539 4150897 dmsA 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 3.5.2 4203167 4203490 4362770 4363333 4364001 4364950 4366676 4397074 4203493 4206033 4363336 4364004 4364957 4366686 4367188 4399424 STY4506 dmsB 3.5.2 4399438 4400061 STY4700 frdD 3.5.2 4558972 4559331 STY4701 frdC 3.5.2 4559342 4559737 STY4702 STY4703 STY0882 STY0883 frdB frdA ybiW ybiY 3.5.2 3.5.2 3.5.2 3.5.2 4559748 4560475 873680 876118 4560482 4562265 876112 877017 STY0907 3.5.2 900194 900916 STY0962 nfsA, mdaA dmsA 3.5.2 955837 958281 STY0963 dmsB 3.5.2 958292 958909 STY0964 dmsC 3.5.2 958911 959774 STY0968 STY0973 pflA pflB 3.5.2 3.5.2 963203 965607 964000 967889 3.5.3 3.5.3 3.5.3 1155708 1383466 1811995 1156280 1383870 1813540 cytochrome b561 homolog 2 (pseudogene) putative cytochrome cytochrome bd-II oxidase subunit I (pseudogene) 3.5.3 3.5.3 1813551 2085537 1814687 2086865 probable cytochrome oxidase subunit II putative ferredoxin STY4321 STY4322 STY4476 STY4477 STY4478 STY4479 STY4480 STY4503 probable hydrogenase-2 cytochrome b subunit hydrogenase-2 small subunit hydrogenase-2 small chain protein probable formate acetyltransferase FdhD protein formate dehydrogenase-O, major subunit formate dehydrogenase-O beta subunit formate dehydrogenase-O gamma subunit FdhE protein Two-component sensor protein histidine protein kinase. Solute binding receptor protein Two-component transcriptional regulatory protein (pseudogene) cytochrome c-type protein (pseudogene) trimethylamine-N-oxide reductase precursor TorD protein glycerol-3-phosphate regulon repressor nitrite reductase (NAD(P)H) small subunit nitrite reductase large subunit cytochrome c-type protein NrfB precursor cytochrome c-type biogenesis protein cytochrome c-type biogenesis protein cytochrome c-type biogenesis protein cytochrome c-type biogenesis protein anaerobic dimethyl sulfoxide reductase chain A (pseudogene) anaerobic dimethyl sulfoxide reductase chain B (pseudogene) fumarate reductase complex subunit D; membrane anchor polypeptide fumarate reductase complex subunit C; membrane anchor polypeptide fumarate reductase, iron-sulfur protein fumarate reductase, flavoprotein subunit putative formate acetyltransferase 3 putative pyruvate formate-lyase 3 activating enzyme oxygen-insensitive NADPH nitroreductase anaerobic dimethyl sulfoxide reductase chain A precursor anaerobic dimethyl sulfoxide reductase chain B anaerobic dimethyl sulfoxide reductase chain C pyruvate formate-lyase 1 activating enzyme formate acetyltransferase 1 Electron transport STY1195 STY1431 STY1919 STY1921 STY2258 yceJ appC, cyxA, cbdA appB pduS STY2473 STY2475 STY2476 STY2481 STY2482 STY2483 STY2484 STY2487 STY2508 STY2784 STY2803 STY2822 STY3580 STY3963 STY3964 STY3966 STY4132 STY0392 STY0393 STY4441 STY4475 STY4778 STY0054 STY0732 STY0786 STY0787 STY0932 STY0933 ccmH1 ccmF1 ccmE1 napC napB napH napG napF yfaE fdx hmpA ubiB ccmE2 ccmF2 ccmH2 qor nrfA cybC ribF fldA cydA cydB hcr 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 2304344 2305938 2307866 2310634 2311246 2311811 2312667 2316105 2342588 2641888 2659359 2305387 2307869 2308345 2311236 2311695 2312680 2313362 2316596 2342842 2642223 2660549 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 3.5.3 2685777 3433640 3832403 3832879 3835361 3994378 400342 401742 4310667 4361222 4639354 52869 733114 784316 785900 923683 924663 2686037 3434341 3832882 3834810 3836404 3994851 401745 402752 4311650 4362658 4639740 53807 733644 785884 787039 924654 926315 cytochrome c-type biogenesis protein H1 cytochrome c-type biogenesis protein F1 cytochrome c-type biogenesis protein E1 cytochrome c-type protein NapC cytochrome c-type protein NapB precursor ferredoxin-type protein NapH ferredoxin-type protein NapG ferredoxin-type protein NapF putative ferredoxin ferredoxin flavohemoprotein (haemoglobin-like protein) putative ferredoxin flavin reductase cytochrome c-type biogenesis protein E2 cytochrome c-type biogenesis protein F2 cytochrome c-type biogenesis protein H2 putative electron-transport protein probable terminal oxidase subunit I probable terminal oxidase subunit II quinone oxidoreductase cytochrome c552 precursor soluble cytochrome b562 riboflavin biosynthesis protein RibF flavodoxin 1 cytochrome d ubiquinol oxidase subunit I cytochrome d ubiquinol oxidase subunit II NADH oxidoreductase Hcr prismane protein homolog (hybrid-cluster protein) Fermentation STY1422 STY2968 STY2969 STY2970 STY2971 STY2972 STY2973 STY2974 STY2975 STY2977 ldhA hycH hycG hycF hycE hycD hycC hycB hycA hypB 3.5.4 3.5.4 3.5.4 3.5.4 3.5.4 3.5.4 3.5.4 3.5.4 3.5.4 3.5.4 1372648 2845058 2845465 2846232 2846784 2848511 2849437 2851263 2852017 2853114 1373637 2845468 2846232 2846774 2848493 2849434 2851263 2851871 2852478 2853986 STY3534 STY3535 STY3711 STY3712 STY3754 STY4484 ttdB ttdA hydG hydH ppc fdhF 3.5.4 3.5.4 3.5.4 3.5.4 3.5.4 3.5.4 3375845 3376462 3561370 3562701 3613296 4370484 3376462 3377361 3562695 3564098 3615947 4372631 D-lactate dehydrogenase formate hydrogenlyase maturation protein formate hydrogenlyase subunit 7 formate hydrogenlyase subunit 6 formate hydrogenlyase subunit 5 formate hydrogenlyase subunit 4 formate hydrogenlyase subunit 3 formate hydrogenlyase subunit 2 formate hydrogenlyase regulatory protein hydrogenase isoenzymes formation protein HypB tartrate dehydratase tartrate dehydratase transcriptional regulatory protein two-component system sensor protein phosphoenolpyruvate carboxylase formate dehydrogenase H Glycolysis STY0138 STY1744 STY1785 STY1825 fruR pykF pfkB gapA 3.5.5 3.5.5 3.5.5 3.5.5 139751 1665112 1706666 1743564 140755 1666524 1707598 1744559 STY2096 STY2370 pykA fbaB, 3.5.5 3.5.5 1948117 2200548 1949559 2201600 fructose repressor pyruvate kinase 6-phosphofructokinase isozyme glyceraldehyde 3-phosphate dehydrogenase A pyruvate kinase A fructose-bisphosphate aldolase class I STY2441 STY3081 STY3226 STY3227 STY3789 STY3809 STY4417 STY4932 STY0804 dhnA fruK eno fba pgk tpiA pfkA pgi gpmB gpmA 3.5.5 3.5.5 3.5.5 3.5.5 3.5.5 3.5.5 3.5.5 3.5.5 3.5.5 2271644 2944316 3092747 3093928 3654396 3672144 4285286 4793635 800959 2272582 2945614 3093826 3095091 3655163 3673106 4286935 4794282 801711 1-phosphofructokinase enolase fructose 1,6-bisphosphate aldolase phosphoglycerate kinase triosephosphate isomerase 6-phosphofructokinase glucose-6-phosphate isomerase probable phosphoglycerate mutase 2 phosphoglycerate mutase 1 3.5.6 3.5.6 1945307 2116142 1946782 2117548 glucose 6-phosphate dehydrogenase 6-phosphogluconate dehydrogenase, decarboxylating pyruvate dehydrogenase complex repressor pyruvate dehydrogenase E1 component dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase dihydrolipoamide dehydrogenase lysine decarboxylase Oxidative branch, pentose pwy STY2094 STY2290 zwf gnd Pyruvate dehydrogenase STY0174 STY0175 STY0176 pdhR aceE aceF 3.5.7 3.5.7 3.5.7 178463 179387 182065 179227 182050 183954 STY0177 STY0259 lpdA ldcC 3.5.7 3.5.7 184153 273613 185580 275754 STY1278 STY1339 STY1653 STY1654 STY0181 STY3539 STY4499 STY0773 STY0775 icdA acnA fumC fumA acnB mdh fumB gltA sdhC 3.5.8 3.5.8 3.5.8 3.5.8 3.5.8 3.5.8 3.5.8 3.5.8 3.5.8 1233870 1298278 1581741 1583312 189006 3380274 4390482 770734 772772 1235120 1300953 1583144 1584958 191603 3381212 4392128 772017 773161 STY0776 sdhD 3.5.8 773155 773502 STY0777 sdhA 3.5.8 773502 775268 STY0778 STY0779 STY0780 sdhB sucA sucB 3.5.8 3.5.8 3.5.8 775282 776527 779343 776001 779328 780551 STY0781 STY0782 sucC sucD 3.5.8 3.5.8 780693 781859 781859 782728 TCA cycle isocitrate dehydrogenase aconitate hydratase 1 (citrate hydro-lyase 1) fumarate hydratase class II Fumarate hydratase class I, aerobic aconitate hydratase 2 (citrate hydro-lyase 2) malate dehydrogenase fumarate hydratase class I citrate synthase succinate dehydrogenase cytochrome b-556 subunit succinate dehydrogenase hydrophobic membrane anchor protein succinate dehydrogenase flavoprotein subunit succinate dehydrogenase iron-sulfur protein 2-oxoglutarate dehydrogenase E1 component dihydrolipoamide succinyltransferase component (E2) succinyl-CoA synthetase beta chain succinyl-CoA synthetase alpha chain Fatty acid and phosphatidic acidbiosynth STY1088 STY1232 STY1233 fabA fabH fabD 3.6.1 3.6.1 3.6.1 1066946 1186982 1187951 1067464 1187935 1188880 STY1234 STY1235 STY1236 STY1352 fabG acpP fabF fabI 3.6.1 3.6.1 3.6.1 3.6.1 1188893 1189783 1190105 1312786 1189627 1190019 1191346 1313574 D-3-hydroxydecanoyl-(acyl carrier-protein) 3-oxoacyl-[acyl-carrier-protein] synthase III malonyl CoA-acyl carrier protein transacylase 3-oxoacyl-[acyl-carrier protein] reductase acyl carrier protein 3-oxoacyl-[acyl-carrier-protein] synthase II enoyl-[acyl-carrier-protein] reductase (NADH) STY1427 STY1695 acpD cfa 3.6.1 3.6.1 1377651 1621347 1378256 1622495 STY2597 STY2609 STY0245 STY2823 STY0255 accD fabB cdsA acpS accA 3.6.1 3.6.1 3.6.1 3.6.1 3.6.1 2433710 2443641 257011 2686149 269925 2434624 2444855 257868 2686529 270884 STY3153 aas 3.6.1 3024118 3026277 STY3560 STY3807 STY4432 STY4473 STY0508 STY0552 accC cdh dgkA acs tesB tesA 3.6.1 3.6.1 3.6.1 3.6.1 3.6.1 3.6.1 3404179 3670095 4303894 4358832 515141 559078 3405528 3670850 4304262 4360790 516001 559692 acyl carrier protein phosphodiesterase cyclopropane-fatty-acyl-phospholipid synthase acetyl-CoA carboxylase beta subunit 3-oxoacyl-[acyl-carrier-protein] synthase I phosphatidate cytidylyltransferase holo-[acyl-carrier protein] synthase acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthetase biotin carboxylase CDP-diglyceride hydrolase diacylglycerol kinase acetyl-coenzyme A synthetase acyl-CoA thioesterase II acyl-coA thioesterase I Purine ribonucleotide biosynthesis STY1272 STY1294 STY1692 STY0163 STY1906 STY2089 purB purU purR guaC prsA purT 3.7.1 3.7.1 3.7.1 3.7.1 3.7.1 3.7.1 1228972 1253291 1617786 167200 1799363 1941304 1230342 1254133 1618811 168243 1800310 1942482 STY2592 STY2725 purF purC 3.7.1 3.7.1 2429356 2562415 2430873 2563128 STY2740 purM 3.7.1 2576788 2577825 STY2741 STY2751 STY2752 STY2771 STY2812 purN guaA guaB ndk purL 3.7.1 3.7.1 3.7.1 3.7.1 3.7.1 2577825 2587671 2589318 2624292 2672341 2578463 2589248 2590790 2624723 2676228 STY3709 purH 3.7.1 3558479 3560068 STY3710 STY4052 STY4723 STY0532 STY0581 purD gmk purA adk purK 3.7.1 3.7.1 3.7.1 3.7.1 3.7.1 3560084 3914577 4585444 539066 589259 3561373 3915200 4586742 539710 590326 STY0582 purE 3.7.1 590323 590832 adenylosuccinate lyase formyltetrahydrofolate deformylase purine nucleotide synthesis repressor GMP reductase ribose-phosphate pyrophosphokinase phosphoribosylglycinamide formyltransferase 2 amidophosphoribosyltransferase phosphoribosylaminoimidazolesuccinocarboxamide synthase phosphoribosylformylglycinamidine cycloligase phosphoribosylglycinamidine myltransferase GMP synthase (glutamine-hydrolyzing) inosine-5'-monophosphate dehydrogenase nucleoside diphosphate kinase (ndk) phosphoribosylformylglycineamide synthetase phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase (bifunctional enzyme) phosphoribosylglycineamide synthetase 5'guanylate kinase adenylosuccinate synthetase adenylate kinase phosphoribosylaminoimidazole carboxylase ATPase subunit phosphoribosylaminoimidazole carboxylase catalytic subunit Pyrimidine ribonucleotide biosynthesis STY1079 STY1201 STY1344 STY4061 STY4800 pyrD pyrC pyrF pyrE pyrB 3.7.2 3.7.2 3.7.2 3.7.2 3.7.2 1056001 1158791 1304384 3921697 4660048 1057011 1159837 1305121 3922338 4660983 STY4800a STY0473 pyrL apbA 3.7.2 3.7.2 4661019 478989 4661120 479900 dihydroorotate dehydrogenase dihydroorotase orotidine-5'-P decarboxylase orotate phosphoribosyltransferase aspartate carbamoyltransferase catalytic subunit pyrBI operon leader peptide ApbA, 2-dehydropantoate 2-reductase STY0076 STY0077 STY0980 carA carB cmk 3.7.2 3.7.2 3.7.2 75696 76860 975505 76844 80087 976188 carbamoyl-phosphate synthase small chain carbamoyl-phosphate synthase large chain cytidylate kinase 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 1064225 1065862 1078113 1081208 1094909 1117233 1130754 1150839 115278 1155136 1192282 1200430 1200818 1205600 1207090 1207444 1232707 1250985 1322110 1343304 1346408 1349331 1373904 1376540 1376739 1394233 1396054 1407487 1433112 1457501 1457973 1487971 1498702 1510585 1531158 1537773 1604160 1615756 1667459 1065865 1066425 1078775 1081755 1095319 1117628 1131446 1151066 117713 1155711 1193298 1200804 1201456 1206139 1207347 1208235 1233036 1252514 1322535 1343540 1347253 1350164 1376540 1376731 1377062 1395858 1396629 1408155 1433333 1457830 1458758 1488513 1499058 1510926 1531979 1538717 1604414 1616610 1668459 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 1724211 1732760 1775546 1779096 1779602 1783564 1838713 1858166 185869 1858820 186191 186995 1872077 1933933 1724696 1733035 1775860 1779221 1779943 1784085 1839294 1858453 186153 1859059 186982 188617 1872268 1934286 putative secreted protein putative lipoprotein putative secreted protein putative secreted protein (pseudogene) putative exported protein putative secreted protein putative secreted protein putative lipoprotein probable secreted protein (pseudogene) putative exported protein putative secreted protein putative lipoprotein putative lipoprotein putative secreted protein putative secreted protein putative exported protein putative secreted protein putative secreted protein hypothetical periplasmic protein putative lipoprotein putative lipoprotein putative exported protein putative exported protein putative lipoprotein putative secreted protein putative exported protein putative exported protein putative lipoprotein putative lipoprotein putative secreted protein putative secreted protein putative exported protein putative periplasmic protein putative secreted protein putative secreted protein putative exported protein putative lipoprotein putative secreted protein conserved hypothetical periplasmic protein (pseudogene) putative exported protein putative exported protein putative lipoprotein putative lipoprotein putative secreted protein putative lipoprotein putative lipoprotein putative exported protein probable secreted protein putative exported protein probable secreted protein putative exported protein putative secreted protein putative exported protein Periplasmic/exported/lipoproteins STY1085 STY1086 STY1099 STY1104 STY1129 STY1158 STY1168 STY1189 STY0113 STY1194 STY1238 STY1246 STY1247 STY1252 STY1254 STY1255 STY1276 STY1292 STY1364 STY1391 STY1394 STY1396 STY1423 STY1424 STY1425 STY1442 STY1443 STY1457 STY1480 STY1501 STY1502 STY1533 STY1545 STY1560 STY1583 STY1590 STY1675 STY1690 STY1748 STY1805 STY1814 STY1867 STY1874 STY1875 STY1882 STY1949 STY1969 STY0178 STY1971 STY0179 STY0180 STY1983 STY2079 pqiB ydhA ynhG envE yacH STY2087 STY2142 STY2149 STY2172 STY2175 STY2218 STY2309 STY2349 STY2350 STY2351 STY2353 STY2355 STY2361 STY2364 STY2378 STY2385 STY2386 STY2395 STY2402 STY2450 STY2607 STY2676 STY2684 STY2713 STY2716 STY2726 STY2735 STY2747 STY2748 STY2765 STY2778 STY2799 STY2813 STY2852 STY2858 STY2906 STY0272 STY2966 STY3091 STY3123 STY3150 STY3194 STY0033 STY3343 STY3353 STY3365 STY3378 STY3407 STY3408 STY3447 STY3450 STY3489 STY3490 STY3496 STY3546 STY3549 STY3555 STY3568 STY3572 yebF yedD erfK stcD, yehA yehR yehZ yohG nlpB yfhD yaeC yhcQ yhdA yhdV 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 1940462 1993043 1997355 2016739 2019141 2053027 2138017 2187521 2188394 2189209 2190285 2190874 2194299 2195375 2208414 1940815 1993378 1998788 2017152 2019494 2053956 2139420 2188240 2189107 2189652 2190764 2191476 2194718 2195992 2209421 putative exported protein putative lipoprotein putative exported protein putative lipoprotein putative exported protein putative exported protein putative exported protein putative exported protein putative exported protein putative exported protein putative exported protein putative exported protein putative exported protein putative exported protein putative exported protein 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 2217595 2218225 2225657 2234412 2280045 2442302 2511407 2518837 2546128 2548075 2563303 2571687 2585359 2585891 2617298 2631984 2654421 2676484 2722539 2728865 2787653 283821 2843759 2954726 2991074 3021387 3060097 31278 3186507 3197757 3207757 3217921 3253356 3253884 3290485 3293511 3331472 3332126 3337058 3385571 3389538 3398469 3411528 3416892 2218053 2218755 2226574 2235848 2280617 2442820 2511784 2519412 2547171 2549373 2564337 2573150 2585875 2586430 2618476 2636918 2655059 2677911 2723276 2729383 2788462 284636 2844538 2955844 2991301 3021605 3060849 32123 3187928 3198149 3208428 3219600 3253739 3254252 3292536 3294086 3332107 3332677 3337633 3386503 3393338 3400409 3413138 3417113 putative lipoprotein putative lipoprotein putative periplasmic protein putative lipoprotein putative lipoprotein putative lipoprotein putative exported protein putative lipoprotein putative exported protein putative exported protein putative lipoprotein putative exported protein putative lipoprotein (pseudogene) putative exported protein putative lipoprotein putative lipoprotein putative exported protein putative exported protein putative lipoprotein putative exported protein putative exported protein putative lipoprotein precursor putative exported protein possible secreted protein possible lipoprotein possible lipoprotein possible lipoprotein putative exported protein putative exported protein possible exported protein possible lipoprotein putative exported protein putative exported protein putative exported protein possible exported protein possible lipoprotein possible exported protein possible exported protein possible exported protein possible exported protein possible exported protein putative lipoprotein putative exported protein possible lipoprotein STY0333 STY3613 STY3614 STY3713 STY0357 STY3833 STY3836 STY3837 STY0368 STY3968 STY3996 STY4010 STY0041 STY4045 STY0382 STY0383 STY4089 STY4092 STY4106 STY4123 STY4142 STY4152 STY0398 STY4208 STY4215 STY4231 STY4253 STY4259 STY0409 STY4418 STY4419 STY4420 STY4421 STY4428 STY4438 STY4449 STY4462 STY4483 STY4510 STY4511 STY4699 STY4735 STY0452 STY4755 STY4756 STY4763 STY4768 STY4769 STY4811 STY4860 STY4895 STY4946 STY0476 STY0479 STY0487 STY0495 STY0509 STY0511 safE yifL yafK yiiG yicN yicH yiaO yaiW malM yjcC yjcO blc yjfO yajI ytfJ ytfM ytfN yjjA yajG ybaV ylaB 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 342296 3467268 3467657 3564352 366107 3692583 3693908 3695190 378398 3837754 3862803 3872958 38773 3904647 391586 391868 3947770 3951821 3966919 3987138 4005668 4011911 407252 4073368 4081901 4097781 4117508 4122975 423107 4287376 4287685 4288320 4289054 4298723 4307686 4317750 4347506 4369618 4401582 4403286 4558327 4597229 460908 4612132 4613286 4620872 4625159 4626889 4670479 4723573 4758838 4806214 482464 483985 492267 502837 516216 517438 342794 3467471 3469666 3564807 366847 3693242 3695008 3696221 378796 3838089 3863261 3873251 39534 3906356 391810 392227 3948732 3952252 3967602 3988897 4005970 4012450 407527 4074021 4083103 4098338 4117786 4123346 424201 4287621 4288323 4289054 4291150 4299640 4308996 4318205 4349107 4370307 4402982 4404191 4558860 4597558 461447 4613271 4614674 4621429 4626892 4630668 4670967 4724034 4759299 4806708 483135 484248 492845 503211 516785 518988 probable lipoprotein (pseudogene) putative lipoprotein possible exported protein possible exported protein putative exported protein putative exported protein putative lipoprotein putative lipoprotein probable secreted protein putative lipoprotein putative exported protein putative secreted protein putative exported protein putative exported protein probable secreted protein probable lipoprotein putative exported protein putative secreted protein putative lipoprotein putative periplasmic protein (pseudogene) putative lipoprotein putative exported protein probable secreted protein putative lipoprotein putative exported protein putative lipoprotein putative exported protein hypothetical protein putative lipoprotein putative exported protein putative lipoprotein putative exported protein putative lipoprotein maltose operon periplasmic protein putative exported protein putative lipoprotein putative exported protein putative exported protein putative exported protein putative membrane protein putative lipoprotein putative exported protein putative lipoprotein putative exported protein putative exported protein putative exported protein putative exported protein putative exported protein putative exported protein putative exported protein putative secreted protein putative secreted protein probable secreted protein probable secreted protein putative lipoprotein putative exported protein conserved hypothetical lipoprotein hypothetical 58.9 kDa protein in tesb-hha intergenic region. Contains probable Nterminal signal sequence, putative exported STY0543 STY0558 STY0613 STY0726 STY0748 STY0796 STY0800 STY0813 STY0860 STY0878 STY0925 STY0937 STY0091 STY0093 STY0095 STY0097 STY0979 STY0997 STY0998 sfbA ybfA ybgF ybhT ybiJ ybiS ybjY ycbB 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 4.1.0 549979 564336 613438 726976 750002 792519 797102 809955 854264 868409 916424 930310 93425 93940 94586 95774 974571 995531 997638 550815 565166 613674 727308 750208 793307 797488 810104 854524 869329 916939 931428 93655 94362 94876 95998 975332 997378 998186 protein probable secreted protein lipoprotein hypothetical secreted protein putative lipoprotein putative exported protein putative exported protein probable secreted protein putative exported protein putative exported protein putative exported protein probable lipoprotein putative exported protein putative lipoprotein probable secreted protein probable secreted protein probable secreted protein putative lipoprotein putative exported protein putative exported protein Inner membrane STY1084 STY1095 STY1096 STY1112 STY1175 STY0122 STY1303 STY1317 STY1377 STY1401 STY1402 STY1434 STY1439 STY1463 pqiA 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 1062967 1072728 1074900 1084014 1137732 124019 1263048 1275666 1330859 1352710 1353980 1385267 1390720 1414042 1064220 1074881 1075346 1084673 1138262 124786 1263695 1276409 1331920 1353741 1354234 1386817 1391064 1414440 STY1474 STY1534 STY1539 STY1543 STY1544 STY1558 STY1584 STY1587 STY1646 STY1662 STY1663 STY1666 STY1681 STY1759 STY1782 STY0017 STY1788 STY1834 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 1426254 1488569 1493553 1495677 1496807 1510106 1532014 1533109 1574643 1591701 1592218 1595392 1608145 1680209 1704154 17049 1708995 1753477 1426703 1489516 1494218 1496579 1497994 1510432 1532343 1534143 1574978 1592141 1592799 1596450 1610184 1681327 1704468 17492 1709531 1754970 STY1838 STY1840 STY1846 4.1.1 4.1.1 4.1.1 1755842 1757163 1760574 1756288 1758347 1760822 yccF yabI yciC putative inner membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein DedA family integral membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein hypothetical 15.2 kDa protein, putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein conserved hypothetical membrane protein (pseudogene) putative membrane protein putative membrane protein putative membrane protein STY1848 STY1860 STY1908 STY1925 STY1958 STY1962 STY1963 STY1970 STY1979 STY2000 STY2002 STY2104 STY2112 STY2173 STY2194 STY2196 STY2198 STY2202 STY2216 STY2265 STY2332 STY2336 STY2367 STY2399 STY2400 STY2411 STY2412 STY2415 STY2426 STY2437 STY2444 STY2449 STY2462 STY2516 STY0225 STY2532 STY2533 STY0227 STY2569 STY2572 STY2614 STY2625 STY2645 STY2651 STY2661 STY2689 STY2697 STY2722 STY2724 STY2734 STY0246 STY2744 STY2766 STY2793 STY2797 STY2810 STY2815 STY2838 STY2859 yedE yedA yeeA yegH yegE yohC yohD yohJ yohK yeiB yeiH yadQ yadS yfcA yfdC yfeA yfeH eutH yaeL yfhG yfhB yfiK yfiN 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 1761136 1768842 1802222 1818448 1848105 1852881 1853695 1858524 1866210 1881004 1882219 1956684 1963601 2017348 2033361 2035491 1761783 1769975 1802443 1818702 1849664 1853339 1854315 1858667 1867493 1881918 1882833 1957358 1963996 2018613 2035064 2036402 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 2036578 2040217 2051109 2091002 2161288 2166493 2198696 2232222 2232941 2243505 2243900 2246526 2255644 2267889 2275328 2278912 2293213 2352222 235669 2368202 2368537 237617 2406602 2409944 2447924 2459776 2479743 2487168 2498394 2522340 2530239 2559162 2561420 2570412 257880 2582300 2618487 2649495 2653445 2669495 2678655 2700857 2729376 2037498 2040528 2052566 2092060 2162868 2169483 2199031 2232809 2233537 2243903 2244595 2246771 2256786 2268938 2275993 2279631 2293833 2352425 237090 2368537 2368914 238240 2408122 2411335 2448733 2460717 2480978 2489357 2499392 2522669 2531465 2559362 2562283 2571479 259232 2584513 2619107 2650373 2654373 2670259 2679290 2701444 2730596 putative membrane protein putative membrane protein putativemembrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein conserved hypothetical integral membrane protein (pseudogene) putative membrane protein putative membrane protein putative inner membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein puatative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein (pseudogene) putative membrane protein putative membrane protein putative membrane protein putative membrane protein STY2865 STY2866 STY2907 STY2908 STY2923 STY2945 STY3126 STY3149 STY3152 STY3205 STY3223 STY3230 STY3231 STY3254 STY3272 STY3326 STY3334 STY3344 STY3347 STY3368 STY0034 STY3377 STY3382 STY3386 STY3406 STY3410 STY0035 STY3412 STY3414 STY3481 STY3491 STY3493 STY3545 STY3558 STY3590 STY3596 STY3606 STY3615 STY3618 STY3619 STY3746 STY3755 STY3787 STY3805 STY3806 STY3915 STY3938 STY3971 STY3983 STY4021 STY4056 STY4126 STY4127 STY4139 STY4140 STY4161 STY4162 STY4176 STY4177 corE corB, yfjD ygeD yqgA yghB yhcP yigN yigM yigF yijD yijP yiiR yidC yidE yicL yiaN yiaM yiaB yiaH yhjY yhjW yhjU 4.1.1 4.1.1 2734639 2735495 2735430 2736736 putative membrane protein putative membrane protein 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 2788477 2788919 2801221 2821463 2993415 3020503 3022923 3070536 3090949 3096984 3097596 3117351 3131717 3172165 3178004 3187993 3191038 3210588 32162 3217282 3226045 3229453 3252690 3254602 32549 3255451 3257114 3325929 3332682 3334497 3383598 3402705 3442308 3450821 3459939 3469681 3470870 3471598 3604612 3616149 3653158 3668495 3668828 3775779 3802080 3839541 3849242 3882205 3917138 3988909 3990189 4004132 4004508 4020081 4021016 4035317 4036993 2788908 2790433 2801670 2821888 2994329 3021216 3024125 3071195 3091809 3097562 3098270 3117917 3132424 3172659 3178663 3189417 3191730 3211361 32449 3217902 3226659 3230064 3253352 3255000 32998 3255936 3257479 3326894 3333464 3335474 3385565 3403304 3443738 3451720 3460319 3470034 3471412 3471951 3604971 3617882 3653586 3668752 3669829 3776477 3803726 3841202 3850075 3883107 3917755 3990186 3990662 4004485 4005502 4020785 4022647 4036996 4037184 putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein DedA-family integral membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membraneprotein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein (pseudogene) putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein (pseudogene) putative membrane protein putative membrane protein putative membrane protein putative membrane protein STY4193 STY4195 STY4199 STY4207 STY4211 STY4217 STY4222 STY4223 STY4229 STY4230 STY4232 STY4236 STY4237 STY4238 STY4262 STY4279 STY4297 STY4301 STY4305 STY4306 STY4323 STY0410 STY0411 STY4406 STY4415 STY4422 STY4440 STY4461 STY4469 STY4470 STY4472 STY4481 STY4485 STY4492 STY0444 STY4687 STY4691 STY4707 STY4709 STY4722 STY4730 STY4751 STY4758 STY4766 STY4782 STY4783 STY4797 STY4802 STY4813 STY4817 STY4818 STY4869 STY4870 STY4871 STY4872 STY4873 STY4875 STY4879 STY4898 yhjD glpG, glpG yhgE yrfF yrfC yrfB yhfC yjbB yjbO nrfG yajC yjeI yjeP yjeQ yjeT yjfL ytfF ytfL 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4056943 4060716 4064592 4072647 4077083 4083608 4087158 4089228 4095379 4096560 4098411 4103634 4104402 4104795 4126290 4149216 4059003 4061744 4066181 4073138 4078552 4084845 4088450 4090295 4096428 4097777 4099076 4104260 4104773 4105067 4127261 4150046 putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative PTR2 family transport protein putative membrane protein (pseudogene) putative membrane protein putative HlyD family secretion protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4174408 4178276 4184842 4185365 4206350 424239 424815 4274669 4281562 4291293 4310250 4346662 4355502 4355905 4358279 4367185 4372970 4379502 454176 4549216 4553477 4565815 4570220 4585144 4592859 4607644 4615506 4622761 4641054 4641842 4658590 4661886 4671772 4678442 4679542 4731292 4731750 4732706 4733220 4734624 4737702 4740664 4760729 4176117 4180408 4185381 4185838 4207531 424547 425030 4276300 4283040 4291703 4310492 4346943 4355912 4356594 4358593 4367805 4373878 4381145 454508 4549692 4553848 4569141 4571296 4585341 4593257 4608570 4616471 4624104 4641830 4642486 4659036 4663289 4672959 4679542 4680624 4731753 4732421 4733080 4734404 4735895 4738667 4741365 4761202 putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein NrfG protein putative membrane-bound beta-hydroxylase putative membrane protein putative membrane protein FxsA protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative innner membrane protein putative inner membrane protein putative inner membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein STY4899 STY4904 STY4924 STY0514 STY0526 STY0546 STY0547 STY0549 STY0554 STY0586 STY0605 STY0614 STY0618 STY0625 STY0679 STY0757 STY0772 STY0788 STY0789 STY0810 STY0841 STY0843 STY0845 STY0846 STY0849 STY0850 STY0851 STY0865 STY0871 STY0875 STY0877 STY0901 STY0903 STY0904 STY0906 STY0914 STY0916 STY0934 STY0096 STY0976 STY0992 smp ybaN ybcI ykgB ybdG crcB ybhL ybhN ybiF ybiP ybiR ybjC ycbC 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4.1.1 4761193 4765611 4784257 519675 532562 554197 554646 556374 560346 593818 606760 613687 617263 623481 677946 757913 769551 787054 787304 806416 837955 838807 839704 839949 843040 843412 844634 856198 862092 864623 867253 895006 897122 899078 899920 907010 908730 926459 95086 971108 987005 4762104 4766675 4784901 520145 532939 554649 555563 557153 562760 594366 608400 614247 618510 623729 678329 758248 770597 787167 787585 807324 838660 839514 839946 840911 843450 844518 845764 858420 862979 866203 868365 896217 898807 899455 900210 907483 908939 927358 95280 971800 987781 putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein (pseudogene) putative membrane protein putative membrane protein (pseudogene) putative membrane protein putative membrane protein putative inner membrane protein putative inner membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein putative membrane protein penicillin-binding protein 3 precursor UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopim ligase UDP-N-acetylmuramoylalanyl-D-glutamyl2,6-diaminopimelate--D-alan alanyl ligase phospho-N-acetylmuramoyl-pentapeptidetransferase UDP-N-acetylmuramoyl-L-alanine:Dglutamate ligase UDP-N-acetylglucosamine:Nacetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol Nacetylglucosamine transferase UDP-N-acetylmuramate:alanine ligase D-alanine:D-alanine ligase B membrane-bound lytic murein Murein sacculus, peptidoglycan STY0142 STY0143 ftsI murE 4.1.2 4.1.2 143140 144893 144906 146380 STY0144 murF 4.1.2 146377 147735 STY0145 mraY 4.1.2 147729 148811 STY0146 murD 4.1.2 148814 150130 STY0148 murG 4.1.2 151371 152438 STY0149 STY0150 STY1927 murC ddlB mltE, 4.1.2 4.1.2 4.1.2 152557 154025 1819619 154032 154945 1820230 sltZ STY2118 STY2268 4.1.2 4.1.2 1969479 2092797 1971350 2093969 4.1.2 4.1.2 2231109 225332 2232056 227854 STY2398 STY0215 yeeC, dacD pbpG mrcB STY2615 mepA 4.1.2 2448733 2449557 STY2687 amiA 4.1.2 2520548 2521417 STY2777 STY2952 pbpC mltB 4.1.2 4.1.2 2629668 2829862 2631983 2830941 STY0281 mltD 4.1.2 297748 299115 STY3128 mltA 4.1.2 2995296 2996393 STY3129 STY3267 mltC 4.1.2 4.1.2 2996893 3126548 2998146 3127633 4.1.2 3323177 3324610 STY3479 STY3486 murA 4.1.2 3329421 3330680 STY3505 mtgA 4.1.2 3343409 3344137 STY3552 STY3553 STY3554 STY3742 mreD mreC mreB murB 4.1.2 4.1.2 4.1.2 4.1.2 3395510 3396001 3397118 3593509 3396001 3397053 3398161 3594537 STY3743 STY3763 STY4303 STY0407 STY0412 STY4715 STY4775 STY4929 STY0488 STY0688 STY0691 murI 4.1.2 4.1.2 4.1.2 4.1.2 4.1.2 4.1.2 4.1.2 4.1.2 4.1.2 4.1.2 4.1.2 3600451 3625958 4181390 420379 425056 4576713 4635777 4790883 493149 683163 686772 3601233 3627064 4183966 421536 426150 4578032 4637150 4792766 493466 684374 688673 4.1.2 791985 792509 4.1.2 889909 891111 4.1.2 917387 918217 1000298 1070003 1277177 1486828 1605896 1666834 1667153 1001389 1071055 1277815 1487253 1606363 1667070 1667392 STY0795 mrcA ampH ddlA amiB mpl slt bolA dacA pbpA, mrdA pal STY0896 dacC STY0927 transglycosylase E penicillin-binding protein (pseudogene) penicillin-binding protein (pseudogene) penicillin-binding protein (pseudogene) penicillin-binding protein 1b; peptidoglycan synthetase penicillin-insensitive murein endopeptidase precursor probable N-acetylmuramoyl-L-alanine amidase penicillin-binding protein 1C membrane-bound lytic transglycosylase B precursor membrane-bound lytic murein transglycosylase d precursor membrane-bound lytic murein transglycosylase A precursor N-acetylmuramoyl-L-alanine amidase membrane-bound lytic murein transglycosylase C Penicillin-binding protein (D-alanyl-Dalanine carboxypeptidase) UDP-N-acetylglucosamine 1carboxyvinyltransferase monofunctional biosynthetic peptidoglycan transglycosylase rod shape-determining protein rod shape-determining protein rod shape-determining protein UDP-N-acetylenolpyruvoylglucosamine reductase glutamate racemase, glutamate racemase alanine racemase penicillin-binding protein 1A penicillin-binding protein AmpH D-alanine:D-alanine ligase A N-acetylmuramoyl-L-alanine amidase murein peptide ligase lytic murein transglycosylase BolA protein D-alanine carboxypeptidase penicillin-binding protein 2 peptidoglycan-associated lipoprotein precursor D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6 precursor) putative N-acetylmuramoyl-L-alanine amidase Outermembrane constituents STY1002 STY1091 STY1319 STY1532 STY1677 STY1745 STY1746 ompF ompA slyB lppA lppB 4.1.3 4.1.3 4.1.3 4.1.3 4.1.3 4.1.3 4.1.3 outer membrane protein F precursor outer membrane protein A putative outer membrane protein putative outer membrane protein (truncation) outer membrane lipoprotein SlyB precursor major outer membrane lipoprotein major outer membrane lipoprotein STY1783 STY1784 STY1830 STY2333 STY2434 STY0218 STY2493 STY2632 STY0247 STY0248 STY3086 STY3364 STY3744 STY0365 STY3916 asmA, yegA cirA fhuA ompC pgtE, prtA yaeT ompH steB tolC btuB phoE glmU STY0384 STY4157 STY4308 STY4940 STY4944 STY0556 STY0725 STY0872 yiaD hofQ sthD sthA ybfM ompX, ompX 4.1.3 4.1.3 4.1.3 4.1.3 1704611 1705619 1748312 2162954 1705570 1706377 1749058 2164810 putative outer membrane protein putative outer membrane protein putative outer membrane protein putative outer membrane assembly protein 4.1.3 4.1.3 2262909 228147 2264900 230338 4.1.3 4.1.3 2322394 2465992 2323530 2466930 4.1.3 4.1.3 4.1.3 4.1.3 4.1.3 4.1.3 4.1.3 259264 261798 2949638 3206069 3601247 374283 3776797 261675 262283 2952337 3207544 3603091 375335 3778167 4.1.3 392297 392812 4.1.3 4.1.3 4.1.3 4.1.3 4.1.3 4.1.3 4.1.3 4015808 4186144 4800549 4804460 562946 725520 863334 4016470 4187382 4801106 4805005 564079 726926 863849 colicin I receptor precursor ferrichrome-iron receptor precursor (pseudogene) outer membrane protein C outer membrane protease E, protease VII precursor outer membrane protein precursor outer membrane protein OmpH precursor outer membrane usher protein outer membrane protein TolC precursor vitamin B12 receptor protein outer membrane pore protein E precursor UDP-N-acetylglucosamine pyrophosphorylase putative outer membrane protein fragment (pseudogene) putative outer membrane protein type II secretion system protein putative fimbrial subunit putative fimbrial protein outer membrane protein putative outer membrane protein outer membrane protein x precursor, outer membrane protein X precursor Surface polysaccharides & antigens rfc kdsA rcsA 4.1.4 4.1.4 4.1.4 1701377 1792009 2031045 1702600 1792863 2031668 STY2288 STY2291 cld rfbP 4.1.4 4.1.4 2113613 2117712 2114596 2119142 STY2292 STY2293 rfbK rfbM2, manC2 , cpsB2 rfbN rfbU rfbV rfbX rfbE rfbS rfbH rfbG rfbF rfbI 4.1.4 4.1.4 2119214 2120634 2120647 2122073 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 2122074 2123019 2124655 2125658 2127027 2128040 2128914 2130254 2131338 2132127 2139431 2140648 2123018 2124080 2125656 2126956 2128043 2128879 2130227 2131333 2132111 2133101 2140651 2141926 4.1.4 4.1.4 2141948 2144976 2143426 2146346 STY2314 STY2316 wcaK wzxC manB, cpsG, rfbL 4.1.4 2147896 2149119 putative glycosyltransferase STY2322 STY2323 STY2324 wcaI, yefD wcaF wcaE wcaD 4.1.4 4.1.4 4.1.4 2151705 2152275 2153034 2152259 2153021 2154247 STY2326 STY2327 STY2328 STY2331 STY2467 STY2528 wcaC wcaB wcaA wza sspH2 pmrF 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 2154222 2155436 2156001 2159475 2297837 2362704 2155439 2155924 2156777 2160614 2300203 2363687 4.1.4 2363684 2365666 4.1.4 4.1.4 2461960 2462318 2462349 2462536 4.1.4 2462589 2464511 rcsF gutQ nanA gmhA coaD, kdtB kdtA 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 283298 2835293 3362630 364627 3927194 283702 2836258 3363523 365205 3927673 putative acetyltransferase putative glycosyltransferase putative colanic acid polymerase (pseudogene) putative glycosyltransferase putative acetyltransferase putative glycosyl transferase (pseudogene) putative polysaccharide export protein secreted protein H2 putative lipopolysaccharide modification protein putative lipopolysaccharide modification protein bactoprenol-linked glucose transferase bactoprenol glucosyl transferase (pseudogene) putative lipopolysaccharide modification acyltransferase RcsF protein putative phosphosugar binding protein N-acetylneuraminate lyase phosphoheptose isomerase phosphopantetheine adenylyltransferase 4.1.4 3927682 3928959 4.1.4 3933525 3934604 4.1.4 3934610 3935623 lipopolysaccharide 1,3-galactosyltransferase 4.1.4 3935641 3936651 lipopolysaccharide 1,2-glucosyltransferase STY4085 waaB, rfaB waaI, rfaI waaJ, rfaJ rfaD 3-deoxy-D-manno-octulosonic-acid transferase lipopolysaccharide 1,6-galactosyltransferase 4.1.4 3942888 3943820 STY4181 yhjO 4.1.4 4039950 4042574 STY4182 yhjN 4.1.4 4042585 4044885 STY4184 yhjL 4.1.4 4046091 4049523 STY4318 bigA 4.1.4 4194856 4200464 STY0606 STY0607 STY0759 STY0760 STY0761 STY0762 gtrB gtrA 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 608393 609316 759249 760426 761332 762594 609319 609678 760343 761319 762465 763364 4.1.4 763368 764078 4.1.4 985175 985921 ADP-L-Glycero-D-mannoheptose-6epimerase putative polysaccharide biosynthesis protein catalytic subunit putative polysaccharide biosynthesis protein subunit B putative polysaccharide biosynthesis protein subunit C (pseudogene) putative surface-exposed virulence protein (pseudogene) bactoprenol glucosyl transferase bactoprenol-linked glucose translocase UDP-galactopyranose mutase putative glycosyl transferase galactosyltransferase putative polysaccharide export ABC transporter permease protein (pseudogene) putative polysaccharide export ABC transporter ATP-binding protein 3-deoxy-manno-octulosonate cytidylyltransferase 4.1.5 1138300 1139133 STY2529 STY2627a STY2627b O-antigen polymerase 2-dehydro-3-deoxyphosphooctonate aldolase colanic acid capsullar biosynthesis activation protein A polysaccharide chain length regulator undecaprenyl-phosphate galactosephosphotransferase phosphomannomutase mannose-1-phosphate guanylyltransferase putative rhamnosyltransferase putative glycosyltransferase putative glycosyltransferase putative O-antigen transporter CDP-tyvelose-2-epimerase paratose synthase putative dehydratase RfbH CDP-glucose 4,6-dehydratase glucose-1-phosphate cytidylyltransferase putative reductase RfbI putative glycosyltransferase putative extracellular polysaccharide biosynthesis protein (pseudogene) putative transmembrane transport protein phosphomannomutase gtrA2 gtrB2 STY2629 STY0271 STY2960 STY3520 STY0355 STY4069 STY4070 STY4076 STY4077 STY1779 STY1897 STY2190 STY2294 STY2295 STY2296 STY2297 STY2298 STY2299 STY2300 STY2301 STY2302 STY2303 STY2310 STY2311 STY2318 STY4078 STY0764 STY0990 kdsB Surface structures STY1176 csgG assembly/transport component in curli production STY1177 STY1178 csgE 4.1.5 1139603 1139998 STY1180 STY1181 STY1210 STY1211 csgB csgA flgN flgM 4.1.5 4.1.5 4.1.5 4.1.5 1141409 1141906 1166894 1167321 1141864 1142361 1167316 1167614 STY1212 flgA 4.1.5 1167706 1168365 STY1213 flgB 4.1.5 1168522 1168938 STY1214 flgC 4.1.5 1168942 1169346 STY1215 STY1216 STY1217 flgD flgE flgF 4.1.5 4.1.5 4.1.5 1169358 1170083 1171315 1170056 1171294 1172070 STY1218 flgG 4.1.5 1172084 1172866 STY1219 STY1220 STY1221 STY1222 STY1223 STY2121 STY2122 STY2123 STY2133 STY2134 STY2164 flgH flgI flgJ flgK flgL flhE flhA flhB flhC flhD fliA 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 1172921 1173625 1174728 1175743 1177419 1972780 1973172 1975243 1986106 1986687 2008974 1173619 1174728 1175678 1177404 1178372 1973172 1975250 1976394 1986690 1987037 2009693 STY2166 fliB, nml fliC, flaG fliD fliS fliT fliE 4.1.5 2009890 2011094 assembly/transport component in curli production assembly/transport component in curli production nucleation component of curlin monomers major curlin subunit precursor flagella synthesis protein FlgN negative regulator of flagellin synthesis (anti-sigma factor) flagellar basal body P-ring protein FlgA precursor putative flagellar basal-body rod protein FlgB (proximal rod protein) putative flagellar basal-body rod protein FlgC (proximal rod protein) flagellar hook formation protein FlgD flagellar hook protein FlgE putative flagellar basal-body rod protein FlgF (proximal rod protein) flagellar basal-body rod protein FlgG (distal rod protein) flagellar L-ring protein precursor flagellar P-ring protein precursor flagellar protein FlgJ flagellar hook-associated protein 1 flagellar hook-associated protein 3 flagellar protein FlhE precursor flagellar biosynthesis protein FlhA flagellar biosynthetic protein FlhB flagellar transcriptional activator flagellar transcriptional activator FlhD RNA polymerase sigma transcription factor for flagellar operon lysine-N-methylase (pseudogene) 4.1.5 2011173 2012693 4.1.5 4.1.5 4.1.5 4.1.5 2012950 2014368 2014775 2019614 2014353 2014775 2015143 2019928 fliF fliG fliH fliI fliJ fliK fliL fliM fliN fliO fliP fliQ fliR staG, yadC staF, yadK staE, 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 2020145 2021820 2022808 2023515 2024907 2025347 2026681 2027153 2028154 2028567 2028944 2029691 2029969 210264 4.1.5 4.1.5 STY2167 STY2168 STY2169 STY2170 STY2176 STY2177 STY2178 STY2179 STY2180 STY2181 STY2182 STY2183 STY2184 STY2185 STY2186 STY2187 STY2188 STY2189 STY0201 STY0202 STY0203 csgF 4.1.5 1139160 1139576 STY0024 STY0025 STY0026 STY0029 STY0030 STY3084 STY3087 STY3088 STY3089 STY3090 STY0031 STY3135 yadL staD, yadM staC, htrE staB, ecpD staA, yadN stcC, yehB stcB, yehC stcA, yehD bcfA bcfB bcfC bcfD bcfE steA steC steD steE steF bcfF ppdC STY3137 ppdB 4.1.5 3012345 3012908 STY3138 ppdA 4.1.5 3012899 3013369 STY3175 STY3176 stdC stdB 4.1.5 4.1.5 3044673 3045457 3045416 3047946 flagellin STY3177 4.1.5 3048066 3048647 STY0032 STY0364 STY3918 STY3919 STY3920 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 30509 373831 3780596 3781269 3781989 31213 374232 3781171 3781967 3784523 2021827 2022815 2023515 2024885 2025350 2026576 2027148 2028157 2028567 2028944 2029681 2029960 2030763 211439 flagellar hook associated protein 2 flagellar protein FliS flagellar protein FliT flagellar hook-basal body complex protein FliE flagellar basal-body M-ring protein flagellar motor switch protein FliG flagellar assembly protein FliH flagellum-specific ATP synthase flagellar FliJ protein flagellar hook-length control protein FliL protein flagellar motor switch protein FliM flagellar motor switch protein FliN flagellar protein FliO flagellar biosynthetic protein FliP flagellar biosynthetic protein FliQ flagellar biosynthetic protein FliR putative fimbrial protein stdA, ybgD bcfG crl stgA stgB stgC 211476 212072 putative fimbrial protein STY3922 STY0369 STY0370 STY0371 STY0372 STY0373 STY4836a STY4839 STY4938 STY4941 STY4943 STY0589 STY0590 STY0592 STY0593 stgD stbE stbD stbC stbB stbA sefA sefD sthE sthC sthB fimA fimI fimC fimD 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 3784535 378844 379568 380898 383443 384266 4696958 4700846 4799424 4801127 4803706 596077 596706 597283 598006 3785602 379602 380893 383459 384204 384802 4697451 4701288 4800508 4803660 4804389 596631 597239 597975 600618 212072 212686 putative fimbrial protein STY0594 fimH 4.1.5 600633 601640 STY0204 STY0205 STY0206 STY0207 STY2379 STY2380 STY2381 4.1.5 212695 213261 putative fimbrial protein 4.1.5 213248 215839 4.1.5 215914 216648 outer membrane usher protein HtrE precursor chaperone protein EcpD precursor 4.1.5 216827 217411 putative fimbrial protein 4.1.5 2209437 2211926 putative outer membrane usher protein 4.1.5 2211940 2212623 putativefimbrial chaperone protein 4.1.5 2212679 2213209 putative fimbrial subunit protein 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 4.1.5 24473 25116 25807 28429 29437 2948970 2952350 2953143 2953664 2954131 29998 3011636 25015 25802 28428 29436 29982 2949557 2953123 2953649 2954134 2954667 30516 3011956 fimbrial subunit fimbrial chaperone fimbrial usher (pseudogene) fimbrial subunit fimbrial subunit fimbrial subunit (pseudogene) periplasmic fimbrial chaperone fimbrial subunit fimbrial subunit fimbrial subunit fimbrial subunit prepilin peptidase dependent protein C precursor prepilin peptidase dependent protein B precursor prepilin peptidase dependent protein A precursor probable fimbrial chaperone protein probable outer membrane fimbrial usher protein probable fimbrial protein fimbrial chaperone curlin genes transcriptional activator probable fimbrial subunit protein fimbrial chaperone protein fimbrial membrane usher protein (pseudogene) probable fimbrial protein fimbrial chaperone protein putative fimbrial protein outer membrane fimbrial usher protein fimbrial chaperone protein probable fimbrial protein fimbrial protein precursor (pseudogene) putative fimbrial protein (pseudogene) putative fibrial protein (pseudogene) outer membrane usher protein (pseudogene) putative fimbrial chaperone protein type-1 fimbrial protein, a chain precursor fimbrin-like protein FimI (pseudogene) fimbrial chaperone protein outer membrane usher protein FimD precursor FimH protein precursor STY0595 fimF, ybcG 4.1.5 601650 602168 STY0596 fimZ 4.1.5 602214 602846 STY0598 STY0600 fimY fimW 4.1.5 4.1.5 603450 604664 604172 605260 fimbria-like protein FimF precursor, hypothetical fimbrial-like protein in fimZ 5' region probable transcriptional regulator (FimXZ protein) fimbriae Y protein fimbriae w protein Ribosomal proteins - synthesis, modification STY1230 STY1495 STY1775 STY1776 STY2461 STY0239 STY2851 STY2860 STY2863 STY3388 STY3464 STY3482 STY3483 STY3524 STY3525 STY3563 STY3733 STY3734 STY3735 STY3736 STY3774 STY3939A STY4066 STY4067 STY4350 STY4351 STY4357 STY4358 STY4359 STY4360 STY4361 STY4362 STY4363 STY4364 STY4365 STY4366 STY4367 STY4368 STY4369 STY4370 STY4371 STY4372 STY4373 STY4374 STY4375 STY4376 STY4377 STY4379 STY4380 rpmF rpsV rplT rpmI rplY rpsB sfhB, rluD rplS rpsP rpsU rpsO rpmA rplU rpsI rplM prmA rplL rplJ rplA rplK rpmE rpmH rpmB rpmG rpsL rpsG rpsJ rplC rplD rplW rplB rpsS rplV rpsC rplP rpmC rpsQ rplN rplX rplE rpsN rpsH rplF rplR rpsE rpmD rplO rpmJ rpsM 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 1185516 1453538 1697311 1697718 2292820 251181 2721427 1185689 1453681 1697667 1697915 2293104 251906 2722407 50S ribosomal protein L32 30S ribosomal protein S22 50S ribosomal subunit protein L20 50S ribosomal subunit protein L35 50s ribosomal protein L25 30S ribosomal protein S2 ftsH suppressor protein SfhB 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 2730753 2732520 3231555 3307435 3327024 3327301 3366017 3366425 3407332 3585623 3586055 3586968 3587676 3639438 3804326 3925835 3926092 4226794 4227264 4232972 4233316 4233956 4234558 4234878 4235716 4236009 4236359 4237073 4237483 4237674 4238092 4238474 4238803 4239357 4239696 4240101 4240644 4241012 4241519 4241702 4243507 4243770 2731100 2732768 3231770 3307704 3327281 3327612 3366409 3366853 3408213 3585988 3586552 3587672 3588104 3639650 3804466 3926071 3926259 4227168 4227734 4233283 4233945 4234561 4234860 4235699 4235994 4236341 4237060 4237483 4237674 4237928 4238463 4238788 4239342 4239662 4240088 4240634 4240997 4241515 4241698 4242136 4243623 4244126 50S ribosomal subunit protein L19 30S ribosomal subunit protein S16 30S ribosomal subunit protein S21 30S ribosomal subunit protein S15 50S ribosomal subunit protein L27 50S ribosomal subunit protein L21 30S ribosomal subunit protein S9 50S ribosomal subunit protein L13 ribosomal protein L11 methyltransferase 50S ribosomal subunit protein L7/L12 50S ribosomal subunit protein L10 50S ribosomal subunit protein L1 50S ribosomal subunit protein L11 50S ribosomal protein L31 50s ribosomal protein l34 50S ribosomal subunit protein L28 50S ribosomal subunit protein L33 30S ribosomal subunit protein S12 30S ribosomal subunit protein S7 30S ribosomal subunit protein S10 50S ribosomal subunit protein L3 50S ribosomal subunit protein L4 50S ribosomal subunit protein L23 50S ribosomal subunit protein L2 30S ribosomal subunit protein S19 50S ribosomal subunit protein L22 30S ribosomal subunit protein S3 50S ribosomal subunit protein L16 50S ribosomal subunit protein L29 30S ribosomal subunit protein S17 50S ribosomal subunit protein L14 50S ribosomal subunit protein L24 50S ribosomal subunit protein L5 30S ribosomal subunit protein S14 30S ribosomal subunit protein S8 50S ribosomal subunit protein L6 50S ribosomal subunit protein L18 30S ribosomal subunit protein S5 50S ribosomal subunit protein L30 50S ribosomal subunit protein L15 50S ribosomal subunit protein L36 30S ribosomal subunit protein S13 STY4381 STY4382 STY4384 STY4747 STY4749 STY4750 STY0512 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4.2.2 4244143 4244566 4246242 4606057 4606778 4607047 519213 4244532 4245186 4246625 4606452 4607005 4607496 519473 STY0513 rpsK rpsD rplQ rpsF rpsR rplI rpmE2, ykgM rpmJ2 4.2.2 519479 519619 STY0052 STY0908 STY0981 rpsT rimK rpsA 4.2.2 4.2.2 4.2.2 52277 900974 976302 52540 901876 977975 30S ribosomal subunit protein S11 30S ribosomal subunit protein S4 50S ribosomal subunit protein L17 30s ribosomal protein S6 30s ribosomal subunit protein S18 50s ribosomal subunit protein L9 putative 50s ribosomal protein L31 (second copy) putative 50s ribosomal protein L36 (second copy) 30S ribosomal protein S20 ribosomal protein S6 modification protein 30S ribosomal protein S1 Ribosomes - maturation and modification STY1087 STY1205 STY1277 STY1331 STY1453 STY2862 STY3550 STY4410 STY4908 rmf rimJ rluB rimL yfjA, rimM rnG yjbC rimI 4.2.3 4.2.3 4.2.3 1066679 1162781 1233033 1066846 1163365 1233698 4.2.3 4.2.3 4.2.3 1289029 1404112 2731953 1289904 1404651 2732501 ribosome modulation factor (protein E) ribosomal-protein-alanine acetyltransferase putative ribosomal large subunit pseudouridine synthase B putative pseudouridine synthase ribosomal-protein-serine acetyltransferase 16S rRNA processing protein 4.2.3 4.2.3 4.2.3 3393449 4277873 4769216 3394918 4278742 4769662 ribonuclease G putative pseudouridine synthase ribosomal-protein-alanine acetyltransferase 5.1.1 5.1.1 5.1.1 5.1.1 5.1.1 5.1.1 5.1.1 5.1.1 2430911 3135014 3135523 4798017 788215 788911 789404 790658 2431399 3135280 3135801 4799366 788907 789339 790534 791950 colicin V production protein (DedE protein) bacteriocin immunity protein bacteriocin immunity protein inner membrane protein CreD TolQ protein tolR protein tolA protein tolB protein precursor Colicin-related functions STY2593 STY3281 STY3283 STY4937 STY0791 STY0792 STY0793 STY0794 cvpA creD tolQ tolR tolA tolB Phage-related functions and prophages STY1011 STY1012 STY1013 STY1014 STY1015 STY1016 STY1017 STY1018 STY1019 STY1020 STY1021 STY1022 STY1023 STY1024 STY1025 int xis exo, redX betA, redB gam 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1008747 1010084 1010373 1010618 1011496 1012638 1010087 1010332 1010618 1011499 1012560 1013318 integrase excisionase putative bacteriophage protein putative DNA methylase putative bacteriophage protein exonuclease 5.1.2 1013315 1014100 bacteriophage recombination protein 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1014106 1014493 1014982 1015718 1016177 1014402 1014693 1015386 1016092 1017160 5.1.2 5.1.2 5.1.2 1017163 1017923 1018267 1017912 1018270 1018791 host-nuclease inhibitor protein prophage Kil protein putative DNA-binding protein putative DNA-binding protein conserved hypothetical bacteriophage protein putative DNA replication protein putative DNA-binding protein conserved hypothetical bacteriophage protein STY1026 STY1027 STY1028 STY1029 STY1030 STY1031 STY1032 STY1033 STY1034 STY1035 STY1036 STY1038 STY1039 STY1040 STY1041 STY1042 STY1043 STY1044 STY1045 STY1046 STY1047 STY1048 STY1049 STY1050 STY1051 STY1052 STY1053 STY1054 STY1055 STY1056 STY1057 STY1058 STY1059 STY1060 STY1061 STY1062 STY1063 STY1064 STY1065 STY1066 STY1067 STY1068 STY1069 STY1070 STY1071 STY1072 STY1073 STY1075 STY1358 STY1361 STY1365 STY1366 STY1370 STY1371 STY1372 STY1373 STY1374 STY1375 STY1591 pspF pspA pspB pspC pspD pspE 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1018791 1019268 1019934 1020282 1020578 1020876 1021558 1021787 1022132 1022943 1023687 1024883 1025144 1025810 1026186 1026467 1027078 1027660 1028101 1028451 1029169 1030572 1031929 1032678 1033902 1034420 1035345 1035886 1036140 1036681 1037045 1037612 1038768 1039212 1039842 1041830 1042417 1042722 1043789 1044292 1045023 1045516 1046268 1046621 1047817 1048497 1050023 1051126 1319577 1321082 1322594 1322944 1326223 1327374 1328102 1328326 1328708 1329002 1538899 1019264 1019840 1020200 1020443 1020865 1021373 1021797 1022092 1022734 1023554 1024484 1025008 1025593 1026199 1026467 1027081 1027617 1028037 1028361 1029203 1030572 1032038 1032663 1033898 1034408 1035361 1035770 1036143 1036694 1037070 1037608 1038757 1039208 1039664 1041830 1042417 1042719 1043789 1044142 1045023 1045451 1046268 1046621 1047820 1048497 1050008 1050541 1051266 1319921 1321351 1322767 1323225 1327203 1328042 1328326 1328685 1328926 1329316 1539288 putative methyltransferase hypothetical bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative damage-inducible protein putative bacteriophage protein putative bacteriophage protein hypothetical prophage protein putative prophage antitermination protein putative bacteriophage protein putative lipoprotein putative prophage membrane protein putative prophage membrane protein putative bacteriophage protein putative secreted protein hypothetical prophage protein putative bacteriophage protein putative prophage terminase small subunit putative prophage terminase large subunit putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein hypothetical prophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative secreted protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein hypothetical prophage protein hypothetical prophage protein putative DNA invertase (fragment) integrase (fragment) hypothetical protein bacteriophage gene remnant (pseudogene) DNA-invertase (fragment) psp operon transcriptional activator PspF phage shock protein A phage shock protein B phage shock protein C phage shock protein D phage shock protein E precursor putative bacteriophage transcriptional regulator STY1592 STY1593 STY1594 STY1595 STY1596 STY1597 STY1598 STY1599 STY1600 STY1601 STY1602 STY1603 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1539260 1539702 1539907 1540134 1540814 1541022 1541402 1541714 1541983 1542275 1542833 1543105 1539712 1539917 1540137 1540817 1541029 1541405 1541704 1541986 1542177 1542805 1543102 1544075 STY1604 STY1605 STY1606 STY1607 STY1608 STY1609 STY1610 STY1611 STY1612 STY1613 STY1614 STY1615 STY1616 STY1617 STY1618 STY1619 STY1620 STY1621 STY1622 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1544282 1546055 1546229 1546722 1547496 1547849 1548347 1548561 1549208 1549534 1549845 1550387 1551982 1553459 1554283 1554956 1556086 1557049 1557389 1546051 1546219 1546660 1547252 1547846 1548268 1548577 1549211 1549534 1549845 1550390 1551982 1553478 1554280 1554741 1556071 1557039 1557387 1557835 STY1623 STY1624 STY1625 STY1626 STY1627 STY1628 STY1629 STY1630 STY1631 STY1632 STY1633 STY1634 STY1635 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1557835 1558296 1558540 1559967 1560491 1560870 1561381 1563846 1564727 1564930 1566081 1566665 1567003 1558299 1558550 1559967 1560488 1560772 1561205 1563846 1564730 1564942 1566084 1566608 1567012 1568106 STY1636 STY1637 STY1638 5.1.2 5.1.2 5.1.2 1568099 1568680 1569707 1568677 1569705 1570219 STY1639 5.1.2 1570219 1570836 STY1640 5.1.2 1570843 1571328 STY1641 5.1.2 1571330 1571800 STY1642 5.1.2 1571802 1572284 STY1643 5.1.2 1572347 1572919 gam eha conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein bacteriophage host-nuclease inhibitor protein hypothetical protein putative bacteriophage GSP secretion protein Eha (pseudogene) hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein putative lipoprotein putative membrane protein hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein putative bacteriophage protein hypothetical protein hypothetical protein putative membrane protein conserved bacteriophage hypothetical protein hypothetical protein hypothetical protein bacteriophage tail sheath protein tail core protein hypothetical protein hypothetical protein putative bacteriophage protein hypothetical protein putative bacteriophage tail fibre protein putative bacteriophage regulatory protein putative bacteriophage baseplate protein putative bacteriophage baseplate protein putative bacteriophage baseplate assembly protein putative bacteriophage tail fiber protein bacteriophage tail fiber protein alternative bacteriophage tail fiber Cterminus putative bacteriophage tail fiber assembly protein alternative bacteriophage tail fiber Cterminus alternative bacteriophage tail fiber Cterminus alternative bacteriophage tail fiber Cterminus DNA-invertase STY0015 STY1841 STY1884 STY1893 STY2008 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 16094 1758466 1784727 1789728 1887450 16438 1758813 1784933 1790852 1887551 STY2009 5.1.2 1887552 1887913 STY2011 STY2012 STY2013 STY2014 STY2015 STY2016 STY2017 STY2018 STY2019 STY2020 STY2021 STY2022 STY2023 STY2024 STY2025 STY2026 STY2027 STY2028 STY2029 STY2030 STY2031 STY2032 STY2033 STY2034 STY2035 STY2036 STY2037 STY2038 STY2039 STY2040 STY2041 STY2042 STY2043 STY2044 STY2045 STY2046 STY2047 STY2048 STY2049 STY2050 STY2051 STY2052 STY2053 STY2054 STY2054A STY2055 STY2057 STY2058 STY2059 STY2060 STY2061 STY2062 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1887993 1888674 1889471 1890004 1891515 1892192 1893392 1893761 1893986 1894800 1895228 1896154 1896486 1897520 1897826 1898476 1900606 1901062 1901514 1902663 1903201 1903577 1904128 1904501 1904911 1905864 1906366 1907613 1908238 1909704 1911073 1911880 1912209 1912585 1913065 1913483 1913754 1914557 1915298 1915387 1915938 1916228 1916899 1917389 1917389 1917646 1919308 1920237 1920890 1921304 1921742 1922526 1888193 1888886 1889989 1891515 1892195 1893391 1893745 1893898 1894741 1895228 1895959 1896489 1897517 1897822 1898476 1900428 1901058 1901502 1902659 1903211 1903590 1904131 1904535 1904869 1905852 1906361 1907598 1908143 1909704 1911107 1911822 1912092 1912601 1913061 1913406 1913785 1914323 1915114 1915393 1915941 1916228 1916827 1917150 1917544 1917601 1917789 1920240 1920791 1921297 1921726 1922554 1923272 hokW mokW putative phage protein putative bacteriophage protein putative integrase (pseudogene) putative bacteriophage protein putative bacteriophage replication protein (pseudogene) probable bacteriophage replication protein (pseudogene) putative integrase (pseudogene) DNA-invertase (pseudogene) putative bacteriophage tail protein putative bacteriophage tail protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative exported protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein putative bacteriophage protein putative bacteriophage protein hypothetical protein putative bacteriophage protein putative endolysin putative bacteriophage protein hypothetical protein putative membrane protein putative bacteriophage protein hypothetical protein hypothetical protein putative bacteriophage protein hypothetical protein putative bacteriophage cohesive ends undefined product host cell-killing modulation protein hypothetical protein hypothetical protein putative membrane protein putative bacteriophage protein hypothetical protein conserved hypothetical protein putative DNA replication protein STY2063 STY2064 STY2065 STY2066 STY2067 STY2068 STY2069 STY2070 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1923279 1924145 1924564 1924903 1925628 1925785 1925965 1926656 1924067 1924567 1924806 1925322 1925783 1925988 1926261 1926877 conserved hypothetical protein conserved hypothetical protein putative cro repressor putative regulator conserved hypothetical protein conserved hypothetical protein hypothetical protein putative cell division inhibitor protein 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1926877 1927122 1927497 1930637 1931753 1927047 1927397 1930625 1931689 1931947 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1931940 1932235 1932482 2280943 2300372 1932128 1932516 1933558 2282499 2300827 STY2469 5.1.2 2301136 2301918 STY2604 STY2605 STY2631a 5.1.2 5.1.2 5.1.2 2440971 2441517 2465525 2441345 2441765 2465770 STY2879 STY2880 STY2881 STY2882 STY2883 STY2884 STY2885 STY2886 STY2887 STY2888 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 2759733 2760475 2760910 2761219 2762316 2762798 2765868 2766002 2766359 2766884 2760506 2760663 2761128 2762319 2762801 2765875 2765987 2766304 2766874 2768056 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 2768199 2769449 2770645 2774411 2775687 2776664 2768771 2770564 2774301 2775655 2776604 2778844 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 2779174 2779866 2781435 3058163 3464804 3515470 3516686 3516918 3517613 3517867 3518551 3518798 3519207 3519440 3519664 2779416 2780918 2782364 3059809 3465706 3516522 3516838 3517487 3517834 3518376 3518775 3519139 3519440 3519667 3520521 putative bacteriophage protein putative bacteriophage protein exodeoxyribonuclease VIII conserved hypothetical protein restriction alleviation and modification enhancement protein conserved hypothetical protein putative excisionase putative integrase rtn protein bacteriophage tail fiber assembly protein (pseudogene) putative bacteriophage tail protein (pseudogene) putative bacteriophage protein putative DNA-binding protein putative bacteriophage tail protein (pseudogene) putative reverse transcriptase hypothetical protein putative bacteriophage late gene regulator putative bacteriophage late gene regulator putative bacteriophage tail protein putative bacteriophage tail protein putative bacteriophage protein putative phage tail protein probable major tail tube protein putative bacteriophage major tail sheath protein putative DNA-invertase putative glycosyltransferase putative ABC transporter protein putative ferric enterochelin esterase putative exported protein TonB-dependent outer membrane siderophore receptor protein hypothetical protein conserved hypothetical protein virulence protein possible integrase integrase/recombinase probable bacteriophage integrase hypothetical protein repressor protein hypothetical protein regulatory protein cII hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein DNA adenine methylase STY2071 STY2072 STY2073 STY2074 STY20074 a STY2075 STY2076 STY2077 STY2451 STY2468 STY2889 STY2890 STY2891 STY2892 STY2893 STY2894 STY2895 STY2897 STY2899 STY3193 STY3610 STY3658 STY3659 STY3660 STY3661 STY3662 STY3663 STY3664 STY3665 STY3666 STY3667 kil, ydaD racC recE lar rtn iroB iroC iroD iroE iroN virK xerC cI cII STY3668 STY3669 STY3670 STY3671 STY3672 STY3673 STY3674 STY3675 STY3676 STY3677 STY3678 STY3679 STY3680 STY3681 STY3682 STY3683 STY3684 STY3685 STY3686 STY3687 STY3688 STY3689 STY3690 STY3691 STY3692 STY3693 STY3694 STY3695 STY3696 STY3697 STY3698 STY3699 STY3700 STY3701 STY3702 STY3703 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 3520518 3523084 3523340 3523748 3525240 3526151 3526926 3527963 3529872 3530722 3531784 3532467 3532994 3533201 3533436 3533911 3534285 3534809 3535233 3535748 3536323 3536669 3537570 3538172 3539686 3540251 3540694 3541120 3541829 3543011 3543581 3543898 3544010 3547084 3547566 3548757 3522932 3523272 3523639 3524554 3526154 3526891 3527963 3529729 3530705 3531780 3532434 3532994 3533197 3533416 3533909 3534288 3534713 3535240 3535679 3536326 3536682 3537577 3538175 3539686 3540279 3540691 3541062 3541686 3543001 3543526 3543883 3544017 3547087 3547569 3548666 3548975 STY4198 STY4599 STY4600 5.1.2 5.1.2 5.1.2 4063955 4473973 4474437 4064311 4474350 4474655 STY4601 STY4602 STY4603 STY4604 STY4605 STY4606 STY4607 STY4608 STY4609 STY4610 STY4611 STY4612 STY4613 STY4614 STY4615 STY4616 STY4617 STY4618 STY4619 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 4474723 4475820 4476305 4479078 4479212 4479569 4480094 4481369 4481801 4482721 4483135 4484751 4485349 4486244 4486600 4487247 4487686 4488213 4488638 4475823 4476305 4479085 4479197 4479514 4480084 4481266 4481590 4482523 4483128 4484754 4485356 4486257 4486603 4487178 4487693 4488117 4488638 4489015 nucE nucD pin 'pin sopE possible endonuclease hypothetical protein possible lipoprotein possible lipoprotein hypothetical protein hypothetical protein probable capsid portal protein terminase, ATPase subunit putative capsid scaffolding protein major capsid protein terminase, endonuclease subunit putative capsid completion protein probable phage tail protein possible secretory protein putative lysozyme putative membrane protein putative regulatory protein putative phage tail protein putative phage tail protein putative phage baseplate assembly protein phage baseplate assembly protein phage baseplate assembly protein putative phage tail protein probable variable tail fibre protein hypothetical protein conserved hypothetical protein hypothetical protein DNA-invertase probable major tail sheath protein probable major tail tube protein putative phage tail protein hypothetical protein hypothetical protein putative phage tail protein putative regulator of late gene expression putative positive regulator of late gene transcription phage-like lysozyme hypothetical protein putative positive regulator of late gene transcription putative regulator of late gene expression putative phage tail protein hypothetical protein hypothetical protein putative phage tail protein probable major tail tube protein probable major tail sheath protein DNA-invertase (pseudogene) invasion-associated secreted protein. putative phage tail fibre protein probable phage tail fibre protein putative phage tail protein probable phage baseplate assembly protein phage baseplate assembly protein putative phage baseplate assembly protein putative phage tail completion protein putative phage tail protein putative regulatory protein putative membrane protein STY4620 STY4621 STY4622 STY4623 STY4624 STY4625 STY4626 STY4627 STY4628 STY4629 STY4630 STY4631 STY4632 STY4633 STY4635 STY4636 STY4637 STY4638 STY4639 STY4640 STY4641 STY4642 STY4643 STY4644 STY4645 STY4718 STY4719 STY4720 STY4721 STY4821 STY4822 STY4823 STY4824 STY4825 STY4826 STY4827 STY4828 STY4829 STY4830 STY4831 STY4832 STY0602 STY0946 nucD2 nucE2 cII apl cI hfQ hflX hflK hflC cI 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 4489020 4489510 4489729 4489932 4490490 4491144 4492225 4493201 4494964 4496059 4496774 4497835 4498909 4499226 4499824 4502229 4503086 4503667 4503894 4504195 4504500 4504708 4505250 4505609 4506245 4580924 4581304 4582799 4584061 4683853 4685181 4686254 4687302 4688741 4689323 4689566 4690849 4691273 4691653 4691877 4692212 605550 937244 4489490 4489725 4489932 4490396 4491140 4492208 4493058 4494967 4496010 4496754 4497838 4498899 4499127 4499656 4502238 4503089 4503670 4503894 4504127 4504536 4504700 4505217 4505492 4506241 4507270 4581232 4582584 4584058 4585065 4685118 4686257 4687327 4688465 4689307 4689562 4690426 4691172 4691656 4691880 4692197 4694545 605735 937621 putative lysozyme possible secretion protein putative phage tail protein putative capsid completion protein putative phage terminase putative major capsid protein putative capsid protein probable terminase subunit probable capsid portal protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein SOS operon tum protein (pseudogene) conserved hypothetical protein DNA adenine methylase putative exonuclease hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein phage regulatory protein phage regulatory protein phage repressor protein cI phage integrase host factor-I protein(HF-I) HflX protein, putative GTP-binding protein HflK protein HflC protein integrase protein kinase protein kinase hypothetical protein phage polarity suppression protein bacteriophage gene regulatory protein putative phage capsid protein phage DNA binding protein phage immunity repressor protein hypothetical protein hypothetical P4 phage protein Bacteriophage P4 DNA primase phage integrase fragment (pseudogene) probable integrase remnant transposase for insertion sequence element IS200 transposase for insertion sequence element is200 putative IS element transposase putative IS element transposase transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 Transposon-related functions STY1108 tnpA 5.1.4 1082125 1082583 STY1114 tnpA 5.1.4 1085337 1085795 STY0114 STY0115 STY1225 tnpA 5.1.4 5.1.4 5.1.4 115571 116031 1178594 116011 117239 1179052 STY1280 tnpA 5.1.4 1235316 1235774 STY1379 tnpA 5.1.4 1333722 1334180 STY1418 tnpA 5.1.4 1367421 1367879 STY1580 tnpA 5.1.4 1529647 1530105 STY1794 tnpA 5.1.4 1715544 1716002 STY1844 tnpA 5.1.4 1759921 1760379 STY1895 tnpA 5.1.4 1791357 1791815 insB insA tnpA 5.1.4 5.1.4 5.1.4 5.1.4 5.1.4 1878054 1917993 2249467 2249889 2330729 1879214 1919201 2249970 2250164 2331187 STY2626 STY2631 STY2640 tnpA 5.1.4 5.1.4 5.1.4 2461018 2464628 2475976 2461233 2465128 2476434 STY2707 tnpA 5.1.4 2539538 2539996 STY0256 tnpA 5.1.4 271076 271534 STY0267 tnpA 5.1.4 280088 280546 STY3025 STY3029 STY3140 tnpA 5.1.4 5.1.4 5.1.4 2897226 2898592 3013615 2897440 2899034 3014073 STY3154 tnpA 5.1.4 3026477 3026935 STY3224 tnpA 5.1.4 3092099 3092557 STY3234 tnpA 5.1.4 3099690 3100148 STY3261 tnpA 5.1.4 3122530 3122988 STY0329 STY0339 STY0343 STY0344 STY3706 STY4124 STY4125 STY4146 STY0437 tnpA tnpA 5.1.4 5.1.4 5.1.4 5.1.4 5.1.4 5.1.4 5.1.4 5.1.4 5.1.4 340209 348345 349946 350172 3550557 3988152 3988346 4009535 446265 340913 348476 350113 350549 3550970 3988427 3988849 4009990 446723 STY4657 STY4658 STY4765 insB insA tnpA 5.1.4 5.1.4 5.1.4 4518289 4518711 4622105 4518792 4518986 4622563 5.1.4 4695457 4696511 5.1.4 5.1.4 4705454 507385 4706288 507843 STY0602a 5.1.4 605710 606051 STY0602b 5.1.4 606085 606213 STY0603 5.1.4 606216 606380 STY1995 STY2056 STY2419 STY2420 STY2497 insB STY4835 STY4848 STY0500 tnpA transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase (pseudogene) putative transposase insertion element IS1 protein InsB insertion element IS1 protein InsA transposase for insertion sequence element IS200 putative transposase (pseudogene) putative transposase (pseudogene) transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 insertion sequence transposase (pseudogene) transposase (pseudogene) transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element is200 IS element transposase (pseudogene) probable transposase remnant (pseudogene) probable transposase remnant (pseudogene) probable transposase remnant (pseudogene) transposase insertion element IS1 protein InsA insertion element IS1 protein InsB putative transposase (pseudogene) transposase for insertion sequence element is200 insertion element IS1 protein InsB insertion element IS1 protein transposase for insertion sequence element is200 putative transposase for insertion sequence (pseudogene) putative transposase (pseudogene) transposase for insertion sequence element IS200 probable IS element transposase fragment (pseudogene) probable IS element transposase fragment (pseudogene) probable IS element transposase fragment STY0657 tnpA 5.1.4 657246 657704 STY0874 tnpA 5.1.4 864041 864499 STY1115 STY1117 STY1120 pipA pipB sigE, pipC sigD, sopB 5.1.5 5.1.5 5.1.5 1086003 1086906 1088329 1086683 1087781 1088670 (pseudogene) transposase for insertion sequence element IS200 transposase for insertion sequence element is200 conserved hypothetical protein conserved hypothetical protein cell invasion protein 5.1.5 1088687 1090372 cell invasion protein 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 1090704 1090875 1091094 1164050 1165319 1219329 1237990 1321705 1090874 1090985 1092563 1164973 1166812 1220339 1239519 1322180 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 1391185 1625241 1626296 1627076 1627339 1628054 1629003 1629358 1629738 1631029 1633059 1633485 1634467 1635138 1635704 1636450 1636710 1636978 1637287 1637973 1638771 1639257 1639676 1640279 1641736 1391325 1626299 1627075 1627342 1627986 1629022 1629377 1629735 1631039 1633074 1633427 1634477 1635141 1635686 1636453 1636698 1636937 1637193 1637976 1638755 1639205 1639673 1640263 1641733 1642209 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 1642206 1642803 1643332 1643582 1644774 1646269 1647071 1649864 1650681 1651581 1652946 1653541 1655478 1656231 1642796 1643129 1643574 1644793 1646267 1646652 1649833 1650502 1651409 1652540 1653566 1655314 1656230 1657253 conserved hypothetical protein hypothetical protein putative secreted peptidase putative virulence factor MviM virulence factor MviN putative virulence determinant, SifA putative invasin pertussis toxin subunit S1 related protein (pseudogene) secreted effector J (pseudogene) putative type III secretion protein putative type III secretion protein putative type III secretion protein putative type III secretion protein putative type III secretion protein putative type III secretion protein putative type III secretion protein putative type III secretion ATP synthase putative type III secretion protein putative pathogenicity island protein putative secretion system protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island lipoprotein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative Type III secretion system chaperone protein putative pathogenicity island effector protein putative pathogenicity island protein putative secretion system protein putative pathogenicity island protein putative outer membrane secretory protein putative pathogenicity island protein putative two-component sensor kinase putative two-component response regulator putative transcriptional regulator putative pathogenicity island protein putative two-component response regulator TtrS protein (pseudogene) tetrathionate reductase subunit B tetrathionate reductase subunit C (membrane STY1121 STY1124 STY1125 STY1126 STY1207 STY1209 STY1264 STY1284 STY1362 pipD mviM mviN sifA STY1439a STY1698 STY1699 STY1700 STY1701 STY1702 STY1703 STY1704 STY1705 STY1706 STY1707 STY1708 STY1709 STY1710 STY1711 STY1712 STY1713 STY1714 STY1715 STY1716 STY1717 STY1718 STY1719 STY1720 STY1721 sseJ ssaU ssaT ssaS yscR ssaQ ssaP ssaO ssaN ssaV STY1722 STY1723 STY1724 STY1725 STY1726 STY1727 STY1728 STY1729 STY1730 STY1731 STY1733 STY1735 STY1736 STY1737 sseB sseA ssaE ssaD ssaL ssaK ssaK ssaJ ssaI ssaH ssaG sseG sseF sscB sseE sseD sseC sscA ssrB ttrR ttrS ttrB ttrC STY1738 STY1739 STY1741 ttrA STY1742 STY1743 STY1878 STY1880a STY1883 STY1886 STY1890 STY1891 STY1987 STY2275 STY2470 STY2755 STY2756 STY2758 STY2760 STY2761 STY2762 pagC pagD msgA cdtB sopE2 sopA shdA ratC ratB ratA sinI sivH, sinH STY2875 STY2876 STY2877 5.1.5 5.1.5 5.1.5 1657246 1660631 1661861 1660308 1661849 1662598 5.1.5 1662657 1663319 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 1663367 1781177 1782539 1784276 1785388 1787529 1788274 1873610 1664710 1781734 1782802 1784515 1786197 1788257 1788687 1874331 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 2098342 2301966 2592456 2597945 2599532 2605324 2611836 2612862 2100684 2302169 2597379 2599525 2605212 2611716 2612801 2615051 5.1.5 5.1.5 5.1.5 2743495 2754433 2755839 2754369 2755842 2757995 STY2878 STY2983 sitA 5.1.5 5.1.5 2758027 2859262 2759190 2860179 STY2984 sitB 5.1.5 2860176 2860997 STY2985 sitC 5.1.5 2860994 2861854 STY2986 sitD 5.1.5 2861845 2862693 sprB 5.1.5 5.1.5 2862665 2862970 2862874 2863725 5.1.5 2864110 2864997 5.1.5 2865343 2865795 STY2986a STY2987 STY2988 sprA, hilC STY2989 STY2991 orgAb 5.1.5 2865811 2866482 STY2991 orgAa 5.1.5 2866439 2867017 STY2992 STY2993 STY2994 STY2995 STY2996 STY2999 STY3000 STY3001 prgK prgJ prgI prgH 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 2867010 2867765 2868089 2868356 2869850 2871866 2873545 2874081 2867768 2868070 2868331 2869534 2870779 2873527 2874027 2875712 STY3002 STY3003 sicP 5.1.5 5.1.5 2875699 2876118 2876049 2876378 iagA iagB stpA protein) tetrathionate reductase subunit A Putative ribokinase (pseudogene) Orf 245 protein, putative pathogenicity island protein putative pathogenicity island protein (pseudogene) putative amino acid permease outer membrane invasion protein putative outer membrane virulence protein putative virulence protein putative toxin-like protein putative pertussis-like toxin subunit putative pertussis-like toxin subunit putative invasion-associated secreted protein (pseudogene) secreted protein (pseudogene) homolog of virulence protein msgA conserved hypothetical protein (pseudogene) conserved hypothetical protein putative lipoprotein (pseudogene) putative exported protein putative exported protein putative intimin (pseudogene) large repetitive protein putative type I secretion protein putative type I secretion protein, ATPbinding protein putative type I secretion protein Iron transport protein, periplasmic-binding protein Iron transport protein, ATP-binding component Iron transport protein, inner membrane component Iron transport protein, inner membrane component hypothetical protein possible AraC-family transcriptional regulator possible AraC-family transcriptional regulator hypothetical protein found within S. typhi pathogenicity island 1 oxygen-regulated invasion protein OrgA, cell invasion protein oxygen-regulated invasion protein OrgA, cell invasion protein cell invasion protein cell invasion protein cell invasion protein cell invasion protein AraC-family transcriptional regulator invasion protein regulator invasion protein IagB tyrosine phosphatase (associated with virulence) chaperone (associated with virulence) doubtful CDS found within S. typhi STY3004 STY3005 sipF sipA 5.1.5 5.1.5 2876422 2876689 2876670 2878746 STY3006 STY3007 STY3008 STY3009 STY3010 STY3011 STY3012 STY3013 STY3014 STY3015 STY3016 STY3017 sipD sipC sipB spaT spaS spaR spaQ spaP spaO spaN spaM spaI 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 2878765 2879857 2881114 2882898 2883533 2884590 2885385 2885671 2886335 2887246 2888256 2888677 2879787 2881086 2882895 2883395 2884603 2885381 2885645 2886345 2887246 2888256 2888699 2889972 STY3018 STY3019 spak invA 5.1.5 5.1.5 2889969 2890400 2890376 2892457 STY3020 STY3021 STY3022 STY3023 STY3026 STY3027 STY3073 STY0286 STY0287 STY0288 STY0289 STY3179 invE invG invF invH 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 2892482 2893597 2895282 2896388 2897705 2897992 2935978 302488 303120 303553 304545 3050045 2893600 2895285 2895932 2896831 2897995 2898519 2936931 303120 303542 304548 306428 3050581 STY3182 5.1.5 3051388 3051786 STY3183 5.1.5 3051786 3052013 STY0290 STY0291 STY0292 STY0293 STY0294 STY0295 STY0296 STY0297 STY3273 STY3274 STY3277 STY3278 STY3279 STY3280 STY3282 STY3285 STY3287 STY3288 STY3289 STY3290 STY3291 STY3292 STY0300 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 306444 306935 307746 308657 309016 311664 311765 312119 3132766 3133460 3133828 3134156 3134334 3134844 3135344 3136204 3136966 3137348 3137880 3138642 3138956 3139187 314246 306938 307759 308648 308728 311679 311762 312055 312661 3133423 3133600 3133947 3134344 3134630 3135017 3135505 3136707 3137151 3137878 3138506 3138812 3139162 3139414 314647 sopD pathogenicity island probable acyl carrier protein function unknown (associated with virulence) cell invasion protein cell invasion protein cell invasion protein unknown function secretory protein (associated with virulence) secretory protein (associated with virulence) secretory protein (associated with virulence) secretory protein (associated with virulence) secretory protein (associated with virulence) secretory protein (associated with virulence) secretory protein (associated with virulence) secretory apparatus ATP synthase (associated with virulence) secretory protein (associated with virulence) possible secretory protein (associated with virulence) cell invasion protein secretory protein (associated with virulence) possible AraC-family regulatory protein cell adherance/invasion protein hypothetical protein hypothetical protein possible secreted protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein outer membrane protein (associated with virulence) hypothetical protein (assiciated with virulence) hypothetical protein (assiciated with virulence) conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein ClpB-like protein hypothetical protein hypothetical protein conserved hypothetical protein integrase (pseudogene) hypothetical protein (pseudogene) hypothetical protein hypothetical protein hypothetical protein bacteriocin (fragment) bacteriocin (fragment) putative exported protein hypothetical protein putative exported protein hypothetical protein hypothetical protein possible membrane protein putative membrane protein hypothetical protein STY0301 STY0302 STY0303 STY0304 STY0305 STY0306 STY0307 STY0308 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 314619 315281 315833 316373 317713 319019 319800 320531 315044 315766 316369 317716 319014 319768 320294 324392 STY0310 STY0311 STY0312 STY0313 STY0314 STY0316 STY0317 STY0318 STY0319 STY0320 STY0321 STY0322 STY0323 STY0324 STY0326 STY0327 STY0328 STY0332 STY0335 STY0336 STY0337 STY0338 STY0341 STY0342 STY0345 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 324392 325202 325657 326234 326689 327278 327721 328166 328636 330849 331314 335381 336077 336466 339076 339338 339851 341669 342869 343633 346165 347043 348682 349746 351764 325159 325672 326130 326704 327150 327694 328158 328273 330825 331295 335378 336058 336370 338997 339336 339781 340156 342163 343609 346143 346635 347864 349626 349859 352474 hypothetical protein conserved hypothetical protein probable lipoprotein conserved hypothetical protein putative membrane protein putative membrane protein hypothetical protein probable IcmF-related integral membrane ATP-binding protein (pseudogene) hypothetical protein hypothetical protein probable secreted protein hypothetical protein probable secreted protein probable secreted protein hypothetical protein hypothetical protein Rhs-family protein hypothetical protein Rhs-family protein hypothetical protein hypothetical protein Rhs-family protein conserved hypothetical protein hypothetical protein hypothetical protein probable lipoprotein periplasmic fimbrial chaperone protein outer-membrane fimbrial usher protein putative fimbrial structural subunit conserved hypothetical protein LysR-family transcriptional regulator SinR hypothetical protein putative fimbrial protein 5.1.5 352525 353100 putative fimbrial subunit 5.1.5 5.1.5 353209 355919 355896 356998 outer membrane fimbrial user protein putative fimbrail protein typA mgtC 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 357131 357726 359306 360350 3726120 3883613 357586 358343 360025 360757 3727943 3884308 STY4023 STY4024 STY4025 STY4027 STY4029 STY4030 mgtB cigR slsA marT fidL misL 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 3884528 3887569 3888370 3889835 3890702 3891261 3887254 3888044 3889050 3890691 3891166 3894130 STY4032 STY4034 STY4035 STY4036 STY4037 STY4039 rmbA 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 3894205 3895555 3896099 3896540 3897656 3898639 3894822 3895689 3896296 3897523 3898490 3899235 transcriptional regulator hypothetical protein possible outer membrane adhesin probable secreted protein GTP-binding protein Magnesium transport ATPase accessory protein Magnesium transport ATPase, P-type 2 putative exported protein (pseudogene) conserved hypothetical protein conserved hypothetical protein (pseudogene) putative exported protein putative virulence-associated autotransporter protein (pseudogene) conserved hypothetical protein putative IS1351 transposase (pseudogene) putative transposase (pseudogene) putative DNA-binding protein conserved hypothetical protein (pseudogene) hypothetical protein STY0346 STY0347 STY0348 STY0349 STY0350 STY0351 STY0352 STY3871 STY4022 safA safB safC safD sinR tcfA, tsaA tcfB, tsaB tsaC tcfD, tsaD tinR STY4041 STY0380 STY0405 STY4452 STY4453 STY4456 STY4457 STY4458 STY4459 STY4460 STY4521 STY4522 STY4523 STY4524 STY4525 STY4526 STY4528 STY4529 STY4530 STY4534 STY4535 STY4536 STY4539 STY4540 STY4541a STY4541 STY4543 STY4544 STY4545 STY4546 STY4547 STY4548 STY4549 STY4550 STY4551 STY4552 STY4553 STY4554 STY4557 STY4558 STY4559 STY4560 STY4561 STY4562 STY4563 STY4564 STY4565 STY4566 STY4568 STY4569 STY4570 STY4571 STY4572 STY4573 STY4574 STY4575 STY4576 STY4577 STY4578 STY4579 topB ssB pilL pilM pilN' pilN' pilO pilP pilQ pilR pilS pilT pilU pilV 'pilV2 rci pilK 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 3899797 390264 416740 4322993 4323622 4325000 4326304 4327598 4337507 4344317 4409652 4410683 4412040 4414008 4414441 4415107 4415909 4417838 4418728 4421390 4421920 4422151 4423868 4425115 4425480 4425981 4427237 4428630 4429110 4430822 4431907 4432552 4433025 4433684 4434993 4435339 4436587 4437266 4438648 4439581 4440435 4441022 4441532 4442121 4444208 4445185 4445457 4445726 4446469 4447122 4448011 4449482 4449922 4450338 4452916 4453457 4453846 4454829 4456256 4456592 3900141 390788 419625 4323625 4325010 4326307 4327581 4337449 4344277 4346383 4410686 4412047 4413839 4414313 4415022 4415664 4417252 4418617 4420722 4421839 4422138 4422687 4425112 4425534 4425905 4427244 4428532 4429100 4430825 4431907 4432542 4433028 4433687 4434991 4435253 4436490 4437054 4438141 4439562 4440321 4440986 4441522 4442101 4444211 4444966 4445457 4445696 4446088 4447122 4448021 4449489 4449925 4450341 4452761 4453302 4453849 4454814 4456259 4456588 4458097 hypothetical protein possible outer membrane protein puative autotransporter/virulence factor putative exported protein putative integral membrane protein putative type-I secretion protein putative type-I secretion protein large repetitive protein large repetitive protein putative type-1 secretion protein hypothetical protein DNA helicase hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein topoisomerase B hypothetical protein hypothetical protein single strand binding protein putative exported protein putative exported protein PilN lipoprotein homolog (pseudogene) pilus assembly protein (pseudogene) putative pilus assembly protein pilus assembly protein nucleotide-binding protein putative membrane protein prepilin putative membrane protein prepilin peptidase prepilin prepilin, alternative C-terminal region shufflon-specific DNA recombinase putative exported protein hypothetical protein putative membrane protein putative exported protein hypothetical protein hypothetical protein putative membrane protein hypothetical protein putative membrane protein hypothetical protein putative membrane protein putative membrane protein possible exported protein hypothetical protein putative exported protein putative lipoprotein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein putative membrane protein putative membrane protein STY4580 STY4582 STY4583 STY4584 STY4585 STY4586 STY4587 STY4588 STY4589 STY4590 STY4591 STY4592 STY4593 STY4594 STY4595 STY4596 STY4647 STY4648 STY4649 STY4650 STY4651 STY4652 yjhP vexE vexD 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 4458133 4458746 4459393 4460652 4461477 4463285 4464722 4465327 4466173 4466754 4467128 4467675 4469696 4470678 4471619 4472078 4507998 4508347 4508645 4509535 4510583 4512573 4458522 4459105 4460640 4461266 4462019 4464205 4465231 4465707 4466757 4467050 4467586 4469624 4470604 4471577 4471978 4472347 4508111 4508634 4509535 4510281 4512553 4513877 STY4653 vexC 5.1.5 4513900 4514595 STY4654 vexB 5.1.5 4514621 4515415 STY4655 STY4656 vexA tviE 5.1.5 5.1.5 4515425 4516537 4516492 4518273 STY4659 STY4660 tviD tviC 5.1.5 5.1.5 4519050 4521569 4521545 4522615 STY4661 tviB 5.1.5 4522618 4523895 STY4662 STY4663 STY4664 STY4665 STY4666 STY4667 STY4668 STY4669 STY4670 STY4671 STY4672 STY4673 STY4674 STY4675 STY4676 STY4677 STY4678 STY4679 STY4680 STY4833 STY4834 STY4837 STY4838 STY4842 STY4843 tviA 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 4524140 4525220 4525533 4527028 4528781 4530221 4530511 4531179 4532268 4534634 4536854 4537312 4537567 4537926 4538390 4539197 4539799 4540153 4541654 4694767 4694997 4697576 4698333 4702716 4702910 4524679 4525408 4527044 4528617 4529794 4530514 4530999 4531631 4534553 4536307 4537315 4537533 4537710 4538252 4539172 4539409 4540077 4541343 4542913 4694907 4695146 4698328 4700849 4702925 4703260 cII int int sefB sefC putative membrane protein possible exported protein conserved hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein Putative methyltransferase conserved hypothetical protein Vi polysaccharide export protein Vi polysaccharide export inner-membrane protein Vi polysaccharide export ATP-binding protein Vi polysaccharide export inner-membrane protein (ABC-2 type transporter) Vi polysaccharide export protein Vi polysaccharide biosynthesis protein TviE, Glycosyl transferases group 1 Vi polysaccharide biosynthesis protein Vi polysaccharide biosynthesis protein, epimerase Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Vi polysaccharide biosynthesis protein hypothetical protein putative DNA helicase hypothetical protein probable phage integrase hypothetical protein conserved hypothetical protein putative membrane protein hypothetical protein putative membrane protein hypothetical protein transcriptional regulatory protein hypothetical protein hypothetical protein hypothetical protein putative membrane protein integrase (fragment) putative membrane protein bacteriophage integrase hypothetical protein hypothetical secreted protein fimbrial chaperone protein outer membrane fimbrial usher protein probable regulatory protein putative gerE-family regulatory protein STY4846 STY4849 STY4850 STY4851 STY0619 STY0712 STY0833 STY0971 slrP 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 4704346 4706399 4710186 4712736 618821 708474 831540 4705191 4710148 4712723 4716035 620791 709352 833804 sopD2 5.1.5 964573 965531 6.1.1 6.1.1 1003596 1081781 1004057 1083271 1092736 1094093 1116598 1125366 1140027 1206213 1216368 1226711 1094100 1094839 1117236 1126247 1140653 1206848 1217081 1228174 apeE putative outer membrane protein helicase related protein DEAD-box helicase-related protein conserved hypothetical protein outer membrane esterase haemolysin-related protein leucine-rich repeat protein SlrP (pseudogene) secreted protein sopD homolog (pseudogene) Global regulatory functions STY1005 STY1106 STY1127 STY1128 STY1157 STY1163 STY1179 STY1253 STY1261 STY1270 copS copR cobB phoQ 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 STY1271 phoP 6.1.1 1228174 1228848 STY1297 STY1299 hns 6.1.1 6.1.1 1255747 1258003 1256760 1258416 fnr 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 1306046 1339652 1342585 1345254 1355387 1306798 1340557 1343175 1346105 1356181 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 1398335 1415872 1428801 1446547 1470680 1477754 1491328 15020 1503716 1507896 1508770 1525912 1527260 1575105 1579435 1606411 1612050 1399126 1417296 1429466 1447125 1471168 1478545 1492200 15967 1504402 1508759 1509984 1527072 1528159 1575836 1580739 1606845 1612649 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 1618808 164472 1718435 1746826 1756268 1764926 1619740 165413 1719277 1748022 1757062 1765774 STY1347 STY1386 STY1390 STY1393 STY1404 STY1446 STY1466 STY1477 STY1490 STY1514 STY1521 STY1537 STY0014 STY1551 STY1555 STY1556 STY1576 STY1578 STY1647 STY1651 STY1678 STY1685 STY1693 STY0159 STY1798 STY1829 STY1839 STY1855 csgD rspB rspA rstA rstB slyA ydhB celD putative transcriptional regulator putative transcriptional regulator (pseudogene) histidine kinase response regulator putative transcriptional regulator putative transcriptional regulator putative regulatory protein putative TetR-family regulatory protein putative regulatory protein sensor protein PhoQ, regulator of virulence determinants transcriptional regulatory protein PhoP, regulator of virulence determinants putative regulatory protein DNA-binding protein (histone-like protein Hlp-II) putative regulatory protein putative transcriptional regulator putative transcriptional regulator putative transcriptional regulator fumarate and nitrate reduction regulatory protein putative regulatory protein putative regulatory protein putative regulatory protein putative regulatory protein putative regulatory protein putative regulatory protein putative regulatory protein putative regulatory protein putative regulatory protein starvation sensing protein RspB starvation sensing protein RspA putative regulatory protein putative regulatory protein putative two-component response regulator two component sensor kinase transcriptional regulator SlyA putative TetR-family transcriptional regulator putative transcriptional regulator putative lysR-family transcriptional regulator putative cel operon repressor putative regulatory protein putative transcriptional regulator putative transcriptional regulator STY1856 STY1898 STY1899 STY1934 STY1972 STY2007 STY2095 STY0186 STY2155 STY2241 STY2278 STY2343 STY2344 6.1.1 6.1.1 6.1.1 6.1.1 1765843 1792901 1793714 1827491 1766436 1793710 1794103 1828210 6.1.1 6.1.1 6.1.1 1859271 1887201 1947124 1860062 1887428 1947993 putative regulatory protein putative regulator putative regulator fatty acid-fatty acyl responsive DNAbinding protein transcriptional regulator KdgR putative DNA-binding protein putative hex-regulon repressor 6.1.1 6.1.1 195592 2002473 196359 2003129 putative transcriptional regulator invasion response-regulator baeS 6.1.1 6.1.1 6.1.1 2070973 2104261 2181100 2071887 2105175 2182503 baeR 6.1.1 2182500 2183222 6.1.1 2205062 2205808 pdu/cob regulatory protein PocR putative transcriptional regulator putative two-component system sensor kinase putative two-component system response regulator putative gntR-family transcriptional regulator putative two-component system response regulator putative two-component system sensor kinase putative transcriptional regulator putative transcriptional regulator mgl repressor and galactose ultrainduction factor putative transcriptional regulator putative two-component system sensor kinase regulator of capsule synthesis B component sensor protein RcsC putative transcriptional regulator (pseudogene) putative transcriptional regulator putative transcriptional regulator putative receptor/regulator protein putative transcriptional regulator putative transcriptional regulator phosphohistidine phosphatase phosphoglycerate transport system transcriptional regulatory protein PgtA phosphoglycerate transport system sensor protein PgtB phosphoglycerate transport regulatory protein PgtC precursor xanthosine operon transcriptional regulator putative transcriptional regulator putative transcriptional regulator ethanolamine operon transcriptional regulator nitrate/nitrite sensor protein NarQ glycine cleavage system transcriptional repressor extragenic suppressor protein SuhB transcriptional activator cadC nitrogen regulatory protein p-II putative transcriptional regulator putative sensor kinase protein fadR kdgR hexR, yebK sirA, uvrY pocR STY2374 STY2388 yehT 6.1.1 2219326 2220045 STY2389 yehU 6.1.1 2220042 2221727 STY2390 STY2410 STY2425 yehV galS 6.1.1 6.1.1 6.1.1 2221950 2242465 2254472 2222681 2243373 2255494 STY2436 STY2494 yeiE yojN 6.1.1 6.1.1 2266905 2324258 2267768 2326927 STY2495 STY2496 STY2504 rcsB rcsC 6.1.1 6.1.1 6.1.1 2326944 2327697 2337200 2327594 2330543 2337894 2344196 2357030 2378234 2412405 2427893 2452380 2467198 2345074 2357812 2379238 2413424 2429320 2452865 2468445 STY2510 STY2522 STY2545 STY2575 STY2591 STY2619 STY2633 pgtA 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 STY2634 pgtB 6.1.1 2468435 2470441 STY2635 pgtC 6.1.1 2470438 2471631 STY2655 STY2660 STY2674 STY2691 xapR 6.1.1 6.1.1 6.1.1 6.1.1 2493002 2497378 2509322 2524275 2493886 2498304 2510614 2525327 6.1.1 6.1.1 2551867 2565312 2553567 2565950 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 2648547 2660730 2667746 2668161 2670261 2649350 2662274 2668084 2669498 2671646 STY2718 STY2728 STY2792 STY2804 STY2808 STY2809 STY2811 ptsJ yfeG, eutR narQ gcvR suhB cadC glnB yfhA STY2818 STY2821 STY2830 STY2831 yfhH 6.1.1 6.1.1 6.1.1 6.1.1 2681675 2684813 2692917 2693393 2682523 2685724 2693396 2694349 STY2832 STY2833 6.1.1 6.1.1 2694349 2695031 2694999 2695606 STY2837 rseA rpoE, sigE yfiE 6.1.1 2699872 2700754 STY2853 STY2900 STY2903 yfiA mig-14 tctE 6.1.1 6.1.1 6.1.1 2723548 2782658 2785422 2723886 2783554 2786837 STY2904 STY2914 STY2917 STY2926 tctD ygaE 6.1.1 6.1.1 6.1.1 6.1.1 2786824 2797347 2798936 2802627 2787498 2798024 2799235 2803961 STY2943 STY2947 luxS csrA 6.1.1 6.1.1 2819165 2823850 2819680 2824035 STY2949 6.1.1 2827136 2827636 6.1.1 2833969 2834328 glucitol operon activator protein 6.1.1 2834527 2835300 glucitol operon repressor STY2961 oraA, recX srlM, gutM srlR, gutR ygaA putative transcriptional regulator (pseudogene) putative sigma(54) modulation protein putative transcriptional regulator putative two-component system sensor kinase transcriptional regulator putative transcriptional regulator putative transcriptional regulator putative transcriptional regulator (pseudogene) autoinducer-2 production protein LuxS carbon storage regulator, carbon storage regulator putative regulatory protein RecX 6.1.1 2836255 2837775 STY2981 fhlA 6.1.1 2856596 2858674 6.1.1 2905042 2905974 6.1.1 6.1.1 6.1.1 2911407 2912190 2915077 2912171 2912594 2916069 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 293718 2958419 2962058 3028619 3037910 3114814 3139940 3178727 294632 2960653 2964814 3029641 3038773 3115500 3140623 3179647 STY3352 6.1.1 3196819 3197685 STY3354 6.1.1 3198301 3198960 STY3355 6.1.1 3198957 3200306 6.1.1 6.1.1 3233766 3257518 3235748 3258414 6.1.1 6.1.1 3331176 33368 3331472 34363 6.1.1 3338936 3340369 putative sigma-54-dependent transriptional regulator transcriptional activator of the formate hydrogenlyase system possible LysR-family transcriptional regulator DeoR-family trancriptional regulator global regulatory protein RNA polymerase sigma subunit RpoS (sigma-38) hypothetical transcriptional regulator GTP pyrophosphokinase sensor protein possible regulatory protein possible regulatory protein probable global regulatory protein LysR-family transcriptional regulator probable AraC-family trancriptional regulatory protein possible AraC-family transcriptional regulator probable two-component system response regulator. probable two-component system sensor histidine kinase RNA polymerase sigma-70 factor possible LysR-family transcriptional regulator possible anti-sigma factor antagonist putative transcriptional regulator (lysR family) RNA polymerase sigma-54 factor (sigma-N) STY2957 STY2959 rseC rseB STY3037 STY3044 STY3045 STY3049 STY0277 STY3094 STY3096 STY3156 STY3165 STY3251 STY3293 STY3335 STY3390 STY3415 slyA rpoS yafC relA barA kdgR rpoD STY3488 STY0036 STY3499 rpoN putative transcriptional regulator putative transcriptional regulator sigma-E factor regulatory protein RseC sigma-E factor regulatory protein RseB precursor sigma-E factor negative regulatory protein RNA polymerase sigma-E factor (sigma-24) STY3500 STY3501 STY3507 STY3521 6.1.1 6.1.1 6.1.1 6.1.1 3340392 3340797 3345014 3363658 3340679 3341288 3347350 3364449 6.1.1 6.1.1 6.1.1 6.1.1 3364558 3365064 3378873 3379525 3365058 3365702 3379478 3380154 STY3547 6.1.1 3386896 3387825 STY3593 STY0038 STY3620 STY3641 6.1.1 6.1.1 6.1.1 6.1.1 3445786 34511 3472059 3498321 3447132 34816 3474605 3499802 6.1.1 3551580 3552416 STY3522 STY3523 STY3537 STY3538 ptsN arcB sspB sspA cyaA gppA STY3708 STY3720 STY3747 rsD yijC 6.1.1 6.1.1 3569296 3604987 3569784 3605622 STY3749 oxyR 6.1.1 3607204 3608121 STY3756 yijO 6.1.1 3618043 3618879 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 3624532 3642207 3662183 3665690 3708770 3626013 3643232 3663142 3666412 3709573 6.1.1 3749553 3750257 STY3762 STY3776 STY3797 STY3802 STY3853 cytR ydeW yihW STY3888 STY3930 phoU 6.1.1 3793743 3794468 STY3935 yidZ 6.1.1 3798276 3799178 STY3944 6.1.1 3811353 3812261 STY3988 6.1.1 3853107 3853892 STY0374 STY3997 6.1.1 6.1.1 385465 3863614 386199 3864357 STY4012 6.1.1 3873448 3876247 STY0377 STY0381 STY4050 spoT 6.1.1 6.1.1 6.1.1 388659 391048 3912117 389402 391575 3914228 STY4058 STY4062 ttk 6.1.1 6.1.1 3918961 3922416 3919863 3923012 STY4100 6.1.1 3957949 3959004 STY4118 STY4131 6.1.1 6.1.1 3982461 3993461 3983273 3994261 yiaJ probable sigma(54) modulation protein nitrogen regulatory IIA protein aerobic respiration control sensor protein putative GntR-family transcriptional regulator stringent starvation protein B stringent starvation protein A possible transcriptional regulator possible GntR-family transcriptional regulator probable LysR-family transcriptional regulator putative regulatory protein putative transcriptional regulator adenylate cyclase guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (guanosine pentaphosphatase) possible LysR-family transcriptional regulatory protein putative regulatory protein possible TetR-family trancriptional regulatory protein hydrogen peroxide-inducible regulon activator putative AraC-family transcriptional regulator putative GntR-family regulatory protein transcriptional repressor putative regulatory protein putative GntR-family regulatory protein putative DeoR-family transcriptional regulator hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region, putative GntR-family transcriptional regulator phosphate transport system regulatory protein putative LysR-family transcriptional regulator putative LysR-family transcriptioanl regulator putative DeoR-family transcriptional regulator possible transmembrane regulator putative GntR-family transcriptional regulator putative transcriptional regulator (pseudogene) possible transmembrane regulator possible transcriptionl regulator guanosine-3',5'-bis(diphosphate) 3'pyrophosphohydrolase; CG Site No. 156 putative regulatory protein putative TetR-family transcriptional regulator putative lacI family transcriptional regulator regulator putative transcriptional regulator putative transcriptional regulator STY4136 STY4164 STY0395 STY4196 xylR STY4197 STY4201 STY4220 STY4227 STY4243 STY4294 STY4295 STY4331 STY4386 STY4412 STY4433 STY4437 STY4463 STY4464 STY4468 STY4490 STY4491 STY4494 STY4496 STY4501 STY4502 STY4514 STY4515 STY0432 yhjC 6.1.1 6.1.1 6.1.1 6.1.1 3999540 4022959 403089 4061817 4000718 4023966 404093 4062719 yhjB 6.1.1 4063347 4063949 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 4068168 4085586 4094257 4109216 4170266 4170982 4213325 4068887 4085966 4094658 4110070 4170985 4172334 4213957 6.1.1 4247111 4247536 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 4279074 4304371 4306924 4349095 4349505 4354511 4377757 4378837 4382756 4386314 4394294 4395010 4405069 4405353 442289 4279832 4304979 4307439 4349418 4349963 4355398 4378836 4379505 4383517 4387246 4395013 4396641 4405356 4406228 442978 nikR rpoH ompR envZ crp, cap zntR, yhdM lexA zur soxS soxR basS basR adiY melR dcuR dcuS phoB STY0433 STY4681 STY4697 STY0448 phoR yjdC ecnR 6.1.1 6.1.1 6.1.1 6.1.1 443048 4543264 4557150 457903 444343 4543839 4557737 458595 STY4737 STY4787 yjfQ 6.1.1 6.1.1 4598488 4645474 4599243 4647447 STY4788 STY4795 STY4799 relB treR pyrI 6.1.1 6.1.1 6.1.1 4647525 4654435 4659574 4647767 4655382 4660035 sefR uxuR phnR 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 4661211 4680830 4701328 4725066 4729080 475558 4661699 4681828 4702139 4725839 4729988 476277 STY4900 STY4901 STY4927 nadR 6.1.1 6.1.1 6.1.1 4762682 4763416 4787603 4763407 4764042 4788835 STY4930 STY4935 STY4936 trpR creB creC 6.1.1 6.1.1 6.1.1 4792824 4795846 4796535 4793150 4796535 4797959 STY4801 STY4819 STY4841 STY4862 STY4867 STY0469 xylose operon regulatory protein putative lacI-family transcriptional regulator AraC-family transcriptional regulator hypothetical lysR-family transcriptional regulator hypothetical luxR-family transcriptional regulator gntR family regulatory protein putative regulatory protein nickel responsive regulator RNA polymerase sigma-32 factor two-component response regulator OmpR two-component sensor kinase EnvZ cyclic AMP receptor protein,catabolite gene activator putative Zn(II)-responsive regulator deoR family regulatory protein LexA repressor zinc uptake regulation protein regulatory protein SoxS SoxR protein lysR family regulatory protein two-component sensor kinase two-component response regulator putative AraC family regulatory protein melibiose operon regulatory protein two-component response regulator two-component sensor kinase putative GerE family regulatory protein araC family regulatory protein phosphate regulon transcriptional regulatory protein PhoB phosphate regulon sensor protein PhoR putative transcriptional regulator transcriptional regulatory protein putative deoR-family transcriptional regulator probable transcriptional regulator putative BglB-family transcriptional antiterminator RelB protein trehalose operon repressor aspartate carbamoyltransferase regulatory subunit putative transcriptional regulator regulatory protein putative activator protein SefR (pseudogene) uxu operon transcriptional regulator probable transcriptional activator probable regulator of 2aminoethylphosphonate uptake and metabolism operon conserved hypothetical regulatory protein conserved hypothetical regulatory protein conserved hypothetical transcriptional regulator probable trp operon repressor putative two-component response regulator putative two-component sensor kinase STY4945 STY4947 STY0492 STY0502 STY0516 STY0545 arcA lon ybaO hha cueR, ybbI STY0562 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 4805344 4806975 497690 509127 520993 553780 4806015 4807691 500044 509585 521211 554196 putative transcriptional regulator protein global response regulator Lon protease hypothetical transcriptional regulator haemolysin expression modulating protein copper efflux regulator 6.1.1 568074 569000 hypothetical lysR-family transcriptional regulator LytB protein putative copper-ion sensor protein fragment (pseudogene) hypothetical araC-family transcriptional regulator transcriptional regulatory protein citb sensor kinase cita putative tetR-family transcriptional regulator transcriptional activator RamA putative lysR-family transcriptional regulator sensor kinase DpiB STY0058 STY0609a lytB cusS 6.1.1 6.1.1 57793 610495 58743 610701 STY0611 ykgD 6.1.1 610886 611740 STY0061 STY0062 STY0622 STY0624 STY0651 STY0674 citB citA 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 6.1.1 61103 61791 622264 623134 652161 672791 61789 63410 622845 623475 653063 674452 6.1.1 674421 675101 STY0675 STY0678 STY0684 STY0703 ramA ybdO dpiB, citA, mpdB dpiA, citB, criR, criR cspE ybeF STY0730 STY0731 STY0743 fur kdpE 6.1.1 6.1.1 6.1.1 731339 732380 742195 732265 732832 742872 STY0744 STY0854 kdpD ybiH 6.1.1 6.1.1 742869 848481 745577 849155 6.1.1 866783 867256 6.1.1 6.1.1 896385 933501 897005 933722 cold shock-like protein cspE lysR-family transcriptional regulator putative sigma-54 dependent transcriptional regulator lysR-family transcriptional regulator ferric uptake regulation protein KDP operon transcriptional regulatory protein sensor protein KdpD hypothetical tetR-family transcriptional regulator transcriptional regulator (iron dependant repressor family) putative tetR-family transcriptional regulator cold shock-like protein CspD 6.1.1 6.1.1 939882 947280 940793 947774 hypothetical transcriptional activator leucine-responsive regulatory protein STY0876 STY0902 STY0940 STY0950 STY0957 cspD, cspH acT lrp 6.1.1 6.1.1 6.1.1 677679 680796 699294 677888 681749 701222 transcriptional regulatory protein dpia, transcriptional regulator CriR Not classified (included putative assignments) STY0104 STY1110 STY1170 STY1172 apaG 7.0.0 7.0.0 7.0.0 7.0.0 102087 1083320 1133023 1135341 102464 1083601 1134126 1136279 STY1190 msyB 7.0.0 1151067 1151441 STY1200 STY1245 STY1249 STY1260 STY1275 STY1315 dinI 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 1158472 1200068 1202272 1215333 1232234 1274508 1158717 1200427 1203297 1216241 1232695 1274909 yciA CorD protein putative acylphosphatase putative oxidoreductase putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region acidic protein MsyB; multicopy suppressor of SecY damage-inducible protein putative protein kinase C inhibitor putative glycosyl hydrolase putative ROK-family protein putative mutT family protein putative acyl-coA hydrolase STY1333 STY1349 STY1376 STY1382 7.0.0 7.0.0 7.0.0 7.0.0 1290578 1307186 1329465 1335036 1291339 1309168 1330862 1336001 STY1385 STY1388 STY1389 STY1395 STY1397 STY1400 STY1419 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 1338604 1340834 1341794 1347328 1350263 1352022 1368017 1339533 1341703 1342507 1349310 1350820 1352624 1371541 STY1435 STY1437 7.0.0 7.0.0 1386954 1388387 1387634 1389034 STY1438 7.0.0 1389041 1389802 STY1441 STY1444 STY1447 STY1454 STY1458 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 1392475 1396641 1399142 1404648 1408209 1393983 1397843 1399774 1405628 1409447 STY1459 STY1467 STY1475 STY1476 STY1478 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 1409479 1417411 1426703 1427430 1429522 1410015 1418856 1427218 1428467 1431642 STY1479 STY1483 STY1503 STY1504 STY1507 STY1508 STY1513 STY1515 STY1520 STY1522 STY1531 STY1536 STY1550 STY1553 STY1582 STY1660 STY1665 STY1680 STY1683 STY0158 STY1758 STY1789 STY1802 osmE 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 1431906 1436331 1458887 1460668 1465441 1466582 1469419 1471213 1476670 1478591 1486099 1490098 1502840 1504853 1530608 1589725 1593370 1607276 1610761 163397 1676888 1709680 1721748 1432967 1437176 1460671 1463196 1466622 1467202 1470498 1472375 1477695 1479682 1486869 1491225 1503586 1506319 1530889 1590840 1595391 1608145 1611657 164386 1679944 1710348 1722089 ampD 7.0.0 172501 173064 7.0.0 7.0.0 7.0.0 7.0.0 1732384 1737762 174007 1745871 1732800 1738313 174957 1746728 STY0168 STY1813 STY1818 STY0170 STY1828 asr hypothetical oxidoreductase conserved hypothetical protein putative ATP-binding protein putative mandelate racemase / muconate lactonizing enzyme family protein putative oxidoreductase putative oxidoreductase putative oxidoreductase invasin-like protein putative thiol peroxidase conserved hypothetical DNA-binding protein probable pyruvate-flavodoxin oxidoreductase putative amino acid ABC transporter putative ABC amino acid transporter permease putative periplasmic amino acid-binding protein putative esterase putative glycolate oxidase putative ribulose-5-phosphate 3-epimerase putative transferase putative benzoate membrane transport protein putative DNA-binding protein putative aldehyde dehydrogenase putative acetyltransferase putative NADP-dependent oxidoreductase probable TonB-dependent receptor YncD precursor possible ATP-binding protein N-hydroxyarylamine O-acetyltransferase putative hydrolase putative hydrolase putative aminotransferase putative transport protein (pseudogene) putative isomerase putative oxygenase (pseudogene) putative alcohol dehydrogenase putative secreted hydrolase putative ATP/GTP-binding protein putative aldehyde-dehydrogenase putative oxidoreductase putative D-mannonate oxidoreductase putative secreted stress response protein putative oxidoreductase putative NADH reducing dehydrogenase putative HlyD-family protein putative oxidoreductase putative aldo/keto reductase conserved hypothetical FAD-binding protein putative hydrolase osmotically inducible lipoprotein E precursor AmpD protein (anhydro-N-acetylmuramyltripeptide amidase) putative MutT-family protein putative nitroreductase putatuve glycosysl hydrolase putative oxidoreductase STY1868 STY1900 STY1910 STY1942 STY1977 STY1991 STY2004 STY2081 STY0185 STY0190 STY2163 STY2191 STY0193 STY2315 STY2319 STY2359a STY2372 STY2401 STY2406 STY2407 STY2416 STY2418 STY2428 STY2429 STY2431 STY2463 STY2466 STY2486 STY2500 STY2521 STY2526 STY2527 STY2544 STY2562 STY2563 STY2564 STY2578 STY2579 STY2586 STY2595 STY2598 STY2600 STY2617 STY2642 STY2646 STY2675 STY2682 STY2686 STY0243 STY2717 STY2729 hemK yjcS yacK fliZ dsrB yadF wcaJ wcaH, yefC yohF yeiA yeiG yejK yejM yojF, napD ais ubiX dedD dedA usg yfeF, ucpA dxr, yaeM aegA bcp 7.0.0 7.0.0 1776009 1794100 1776539 1794933 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 1803420 1832560 1864800 1876603 1883242 1935179 194599 198720 2008364 2031707 203598 2143528 1804511 1833219 1865486 1877022 1885221 1935559 195582 200330 2008915 2031904 204260 2144922 7.0.0 2149116 2149595 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 2193505 2203122 2233585 2238562 2239215 2246976 2248211 2193863 2204126 2234346 2239206 2239916 2248217 2249445 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 2257799 2258645 2260623 2293861 2295307 2315852 2258656 2259034 2261510 2294868 2297067 2316115 7.0.0 7.0.0 7.0.0 7.0.0 2334419 2355811 2360664 2361544 2335621 2357028 2361269 2362701 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 2377251 2398326 2399017 2400919 2414648 2415435 2421602 2431710 2434774 2436294 2450682 2476613 2480998 2510629 2516815 2378168 2398925 2400843 2401596 2415292 2416082 2422171 2432384 2435433 2437307 2451614 2477851 2482650 2511348 2517606 7.0.0 7.0.0 2519910 254731 2520335 255927 7.0.0 7.0.0 2549822 2565950 2551681 2566420 putative cytochrome HemK protein, putative protoporphyrinogen oxidase putative ATP/GTP-binding protein putative hydrolase ProP effector putative acetyltransferase putative hydrolase putative cation resistance protein PdxA-like protein possible multicopper oxidase precursor FliZ protein DsrB protein carbonic anhydrase putative extracellular polysaccharide biosynthesis protein putative O-antigen biosynthesis protein RhsF core protein (pseudogene) putative hydrolase putative oxidoreductase glutathione-S-transferase-family protein FAA-hydrolase-family protein putative oxidoreductase putative pyrimidine metabolism oxidoreductase (pseudogene) putative esterase putative DNA-binding protein putative hydrolase nucleoid-asociated protein putative sulphatase putative napAB assembly protein putative MR-MLE-family protein putative MR-MLE-family protein Ais protein putative lipopolysaccharide biosynthesis protein putative hydrolase putative oxetanocin A biosynthetic enzyme putative sodium/sulphate transporter putative phosphatase putative glutathione-S transferase putative glutathione-S transferase putative decarboxylase DedD protein DedA protein (dsg-1 protein) putative semialdehyde dehydrogenase conserved hypothetical protein putative aminotransferase putative decarboxylase putative amidotransferase putative oxidoreductase putative acetyltransferase 1-deoxy-D-xylulose 5-phosphate reductoisomerase, hypothetical protein in frr 3'region putative oxidoreductase bacterioferritin comigratory protein STY2764 STY2768 STY2769 STY2781 STY2788 STY2800 STY2817 STY2819 STY2826 STY2871 STY2909 STY2910 STY2962 STY2963 STY3043 STY3046 STY3052 STY3054 surE ygbB 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 2615707 2620506 2621651 2639453 2645152 2655185 2680666 2682562 2688012 2740983 2790727 2791739 2837961 2839397 2910690 2912765 2918049 2919837 2617179 2621624 2622625 2640238 2645538 2656462 2681559 2683479 2688917 2741321 2791713 2793007 2839400 2840530 2911210 2913358 2918810 2920316 STY3055 ygbP 7.0.0 2920316 2921026 STY0276 STY3095 STY0280 STY3103 STY3124 STY3151 STY3164 STY3195 STY3212 STY3297 STY3303 STY3311 STY3330 STY3337 STY3338 STY3349 STY3396 STY3397 STY3403 STY3455 STY3457 STY3459 STY3480 STY3516 STY3526 STY3548 yafB ygcA yafE yqcB 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 292894 2960705 296922 2971083 2991494 3021796 3036609 3061120 3079659 3143359 3148995 3160321 3174262 3179819 3181088 3191970 3242298 3243758 3248471 3296202 3297440 3299500 3324741 3359426 3367154 3387948 293697 2962000 297692 2971865 2992699 3022836 3037787 3061665 3080861 3144660 3149714 3161187 3175146 3180982 3181915 3193382 3243587 3245775 3249505 3296705 3298435 3300507 3325913 3360301 3368278 3389393 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 3400613 3431563 3444898 3458546 3470104 3605821 3401587 3433386 3445710 3459430 3470424 3607221 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 361067 3619134 361943 3627061 3656402 361834 3619796 364387 3628320 3657277 STY3556 STY3579 STY3592 STY3604 STY3616 STY3748 STY0353 STY3758 STY0354 STY3764 STY3792 gcpE yfgA sseB nifU csiE era smpA ygaF ygbJ yqeF ordL sufI tldD, tldD yhdH ysgA cyaY udhA talC yneB putative GTP-binding protein GcpE protein (protein E) putative DNA-binding protein SseB protein NifU-like protein stationary phase inducible protein CsiE putative phophosugar binding protein putative oxidoreductase GTP-binding protein small protein A gab protein homolog putative GAB DTP gene cluster repressor putative flavoprotein putative rubredoxin reductase putative oxidoreductase (pseudogene) possible decarboxylase stationary-phase survival protein 2C-methyl-D-erythritol 2,4cyclodiphosphate synthase 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase hypothetical oxidoreductase putative RNA methyltransferase putative methyltransferase putative RNA pseudouridylate synthase possible aminotransferase possible oxidoreductase probable acetyl-CoA acetyltransferase probable isomerase possible monooxygenase putative oxidoreductase possible hydrolase possible transferase possible oxidoreductase probable alcohol dehydrogenase possible oxidoreductase (pseudogene) SufI protein probable aminotransferase probable oxidoreductase (pseudogene). possible oxidoreductase putative acetyltransferase putative protease possible monooxygenase probable GTP-binding protein possible kinase putative ATP/GTP-binding protein TldD protein possible oxidoreductase possible transferase putative hydrolase chloramphenicol-sensitive protein RarD CyaY protein possible pyridine nucleotide-disulphide oxidoreductase possible hydrolase putative transaldolase possible acyl-CoA dehydrogenase putative serine hydroxymethyltransferase putative aldolase STY3798 STY3804 STY0358 STY3830 STY3832 STY3845 STY3849 STY3852 STY0040 STY3855 STY3856 STY3859 STY3880 STY3882 STY3924 STY3931 STY3945 STY3958 STY3967 STY4005 STY0376 STY4009 STY4017 STY4044 STY4054 STY4057 STY4088 STY4091 STY4099 STY4112 STY4115 STY4119 STY4130 STY4135 STY4148 STY4151 STY4154 STY4156 STY4158 STY4159 STY4174 STY4202 STY4213 STY4219 STY4221 STY4261 STY4264 STY4265 STY4266 STY4286 STY4300 STY4302 STY4340 STY4398 STY4399 ydeV dinP yiiF yiiD yihX yihU yihT yihQ yihG yhjA yidR yiaS, sgbE bax yafP yiaE bisC yiaC uspB yrfG yrfE yheR yrdA yjaB 7.0.0 7.0.0 7.0.0 3663229 3667525 367097 3664821 3668484 368152 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 3690386 3691934 3703463 3705694 3707980 3691534 3692500 3703711 3706683 3708579 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 37103 3710668 3711587 3714626 3735443 3739595 3787485 3794563 3812376 3828729 3836526 3869336 386985 3871470 3879146 3902226 3915457 3918003 3946749 3950029 38674 3711564 3712465 3716662 3736075 3740503 3788255 3795228 3813569 3830129 3837752 3869659 388559 3872852 3880255 3904544 3917138 3918887 3947783 3951552 7.0.0 7.0.0 7.0.0 7.0.0 3956485 3973306 3977536 3983434 3957681 3973914 3978417 3984129 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 3992233 3998655 4010135 4011055 4013051 4014615 4016623 4018925 4034606 3993231 3999479 4010602 4011540 4013458 4015589 4018956 4019365 4035163 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 4069063 4079699 4084900 4085976 4125259 4128092 4129571 4130526 4161200 4177543 4180698 4219938 4256466 4262945 4069917 4080034 4085547 4087142 4126293 4129306 4130059 4131563 4161883 4178253 4181294 4220489 4257020 4263382 putative sugar kinase putative carbohydrate kinase hypothetical protein DinP (DNA damageinducible protein) alcohol dehydrogenase putative DNA-binding protein putative CopG-family DNA-binding protein putative acetyltransferase putative haloacid dehalogenase-like hydrolase putative secreted 5'-nucleotidase putative oxidoreductase putative aldolase putative glycosyl hydrolase ATP/GTP-binding protein putative acyltransferase putative shikimate 5-dehydrogenase putative hydrolase possible racemase probable cytochrome c peroxidase putative ATP/GTP-binding protein putative DNA-binding protein putative rtn protein putative glycosyl hydrolase putative transferase putative glycosyl hydrolase putative DNA ligase (pseudogene) putative beta-lactamase putative glycosyltransferase 2,3-bisphosphoglycerate-independent phosphoglycerate mutase putative racemase putative glutathione transferase putative sugar kinase putative sugar isomerase putative carboxylic acid dehydrogenase putative exported amidase putative acetyltransferase putative acetyltransferase putative DNA-binding protein putative 2-hydroxyacid dehydrogenase biotin sulfoxide reductase putative acetyltransferase putative trans-sulfuration enzyme (pseudogene) putative phosphosugar-binding protein universal stress protein B putative DNA-binding protein putative aminotransferase puative phophotriesterase putative ribokinase putative acetyltransferase putative oxidoreductase putative competence protein putative hydrolase putative NUDIX hydrolase putative oxidoreductase putative transferase putative acetyltransferase STY0418 7.0.0 429630 430742 adrA protein 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 4350256 435467 4374136 4407323 4573578 4637904 465808 4671074 4681892 4738848 4350924 436375 4374600 4407814 4574732 4639256 466782 4671589 4683382 4740219 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 48368 504580 507959 520263 540899 50407 506280 509014 520814 541870 putative glutathione S transferase hypothetical ROK-family protein putative acetyltransferase Putative acetyltransferase putative 4Fe-4S binding protein putative PmbA protein putative oxidoreductase putative acetyltransferase hypothetical fused protein (pseudogene) putative aldehyde dehydrogenase (pseudogene) putative glycosyl hydrolase putative solute-binding protein putative lyase maltose O-acetyltransferase acetyl esterase 7.0.0 7.0.0 7.0.0 7.0.0 557239 558153 566910 611956 558093 558923 568004 613281 7.0.0 7.0.0 7.0.0 647794 649009 658533 648882 650169 660812 STY0660 7.0.0 660809 661366 STY0661 7.0.0 661366 662133 STY4465 STY0426 STY4486 STY4518 STY4712 STY4777 STY0460 STY4812 STY4820 STY4876 STY0049 STY0498 STY0501 STY0515 STY0534 STY0550 STY0551 STY0561 STY0612 STY0646 STY0647 STY0659 adrA, yaiC yajF phnO yjeS pmbA ybaE maA aes, ybaC ybbN ybbO ybbB ykgC ybdH STY0663 ybdR 7.0.0 662852 664090 STY0668 STY0680 STY0689 STY0698 STY0700 STY0701 STY0715 STY0717 STY0734 STY0847 STY0855 STY0858 citG 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 667277 678420 684513 693269 696693 697051 709980 712799 734222 840911 849385 853134 668173 679207 685646 693859 697034 698223 711065 713974 734992 842152 850752 854108 STY0862 STY0886 STY0894 STY0895 STY0915 STY0919 STY0928 STY0936 STY0949 ybiI ybiK yliI yliJ ybjF 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 7.0.0 854809 879483 887921 889039 907526 910653 918214 929214 938913 855075 880424 889042 889665 908653 912140 919227 930164 939773 rlpA rlpB ybeZ yleB ybfF ybhO rhlE ybiB ybjX thioredoxin-like protein hypothetical oxidoreductase hypothetical ATP-binding protein probable pyridine nucleotide-disulfide oxidoreductase putative oxidoreductase putative aminotransferase molybdopterin-containing oxidoreductase catalytic subunit molybdopterin-containing oxidoreductase iron-sulfur subunit molybdopterin-containing oxidoreductase membrane anchor subunit hypothetical zinc-dependant alcohol dehydrogenase CitG protein possible hydrolase (pseudogene) rare lipoprotein A precursor rare lipoprotein B precursor putative hydrolase N-terminus putative hydrolase C-terminus PhoH-like ATP-binding protein putative monooxygenase putative esterase/lipase YbfF putative phospholipase putative ATP-dependent RNA helicase rhlE hypothetical 35.0 kDa protein in ding-glnq intergenic region, putative glycosyltransferase (pseudogene) hypothetical Zinc-finger containing protein putative L-asparaginase putative oxidoreductase glutathione s-transferase family protein hypothetical RNA methyltransferase probable sulfatase putative oxidoreductase putative virK protein putative pirin-related protein 2. Pseudogenes detected in the S. typhi sequence gene STY0026 STY0113 STY0218 STY0235 STY0298 STY0308 name bcfC fhuA - mutation 2xSTOP IS ins f.s. f.s. @(T)7 STOP f.s. STM + + + + (T)8 + + E.c. + - class 4.1.5 4.1.0 4.1.3 1.5.0 0.0.2 5.1.5 STY0329 STY0333 safE multiple f.s. ps. - - 5.1.4 4.1.0 STY0339 STY0343 STY0344 STY0384 STY0389 res truncation truncation truncation truncation f.s. @ (A)2 ps. + + (A)3 - 5.1.4 5.1.4 5.1.4 4.1.3 2.2.03 STY0428 STY0453 STY0525 STY0539 STY0563 STY0569 STY0590 STY0602 STY0602a STY0602b STY0603 STY0609a STY0610 araJ ybaD priC ushA allA ybbW fimI cusS silA STOP f.s.+STOP STOP f.s. @(A)5 f.s. @(T)5 STOP STOP truncation truncation truncation truncation truncation truncation + + + + (A)6 + (T)6 + + ps. ps. ps. (d) ps. ps. (d) ps. (d) + + + + (A)6 + (T)6 + + + + 1.5.0 0.0.2 2.2.03 3.3.18 3.4.6 1.5.0 4.1.5 5.1.2 5.1.4 5.1.4 5.1.4 6.1.1 1.4.2 STY0632 STY0680 STY0705 STY0739 STY0762 fepE - STOP f.s. truncation multiple STOP + + + + + + ps. (d) + - 1.5.0 7.0.0 0.0.0 3.3.14 4.1.4 STY0765 STY0768 - + + - 0.0.2 0.0.2 STY0833 STY0841 STY0845 STY0856 STY0858 STY0863 STY0971 STY0987 STY1006 STY1104 STY1106 STY1136 slrP ybhL dinG ybiB ybiN sopD2 ycaQ hpcC multiple internal del. 2xSTOP f.s. truncation STOP STOP f.s. f.s.@(A)8 STOP f.s.@(G)6 f.s.@(A)6 IS ins. f.s.@(A)4 + + + + + + + A6CAA + + (G)5 + (A)7 + + (A)5 + + + + + - 5.1.5 4.1.1 4.1.1 2.2.03 7.0.0 0.0.2 5.1.5 0.0.2 3.4.5 4.1.0 6.1.1 3.4.3 STY1195 STY1244 STY1295 STY1306 yceJ fhuE ychJ oppC STOP f.s.@(G)3 STOP f.s.@(G)2 + + (G)2 + + (G)3 + + + + 3.5.3 1.5.0 0.0.2 1.5.02 STY1362 - fragment + - - 5.1.5 speF - function fimbrial usher probable secreted protein ferrichrome-iron receptor precursor probable sugar transporter conserved hypothetical protein probable IcmF-related integral membrane ATPbinding protein IS element transposase probable lipoprotein (fimbrial?) (duplication of upstream gene) probable transposase remnant probable transposase remnant probable transposase remnant putative outer membrane protein fragment type III Restriction-modification system StyLTI enzyme res AraJ protein conserved hypothetical protein primosomal replication protein n'' UDP-sugar hydrolase ushA ureidoglycolate hydrolase putative allantoin permease fimbrin-like protein FimI phage integrase fragment probable IS element transposase fragment probable IS element transposase fragment probable IS element transposase fragment putative copper-ion sensor protein fragment putative inner membrane proton/cation antiporter SilA ferric enterobactin transport protein FepE possible hydrolase hypothetical protein ornithine decarboxylase, inducible putative polysaccharide export ABC transporter permease protein conserved hypothetical protein conserved hypothetical protein leucine-rich repeat protein SlrP putative membrane protein putative membrane protein probable ATP-dependent helicase ding putative glycosyltransferase conserved hypothetical protein secreted protein sopD homolog conserved hypothetical protein putative diaminopropionate ammonia-lyase putative secreted protein putative transcriptional regulator 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase cytochrome b561 homolog 2 FhuE receptor precursor conserved hypothetical protein oligopeptide transport system permease protein OppC pertussis toxin subunit S1 related protein STY1365 - STY1410 STY1439a STY1440 STY1491a STY1492 STY1508 STY1515 dbpA sseJ fdnG - STY1525 STY1532 STY1563 STY1657 hyaB2 malX STY1657a STY1735 malY ttrS STY1739 - STY1742 - STY1748 STY1781 ynhG - STY1827 STY1834 STY1884 STY1913 STY1924 STY1974 yeaD yeaJ treA - STY1987 sopE2 STY1995 STY2008 STY2009 STY2011 STY2012 STY2118 STY2139 araH STY2166 STY2196 STY2226 STY2229 STY2231 fliB STY2238 STY2254 STY2268 STY2275 cbiC pduN dacD sopA STY2311 wcaK STY2324 STY2328 STY2359a STY2360 STY2369 wcaD wcaA - cbiM cbiK cbiJ f.s. fragment + STOP f.s. @ (A)2 truncation truncation f.s. @ (T)5 truncation truncation deletion + f.s. STOP truncation f.s. truncation - - 5.1.2 bacteriophage gene remnant + (A) + + + (T)4 + + + + + - 2.2.11 5.1.5 0.0.1 0.0.2 3.5.2 7.0.0 7.0.0 ATP-dependent RNA helicase secreted effector J conserved hypothetical protein conserved hypothetical protein formate dehydrogenase putative transport protein putative oxygenase + + + ps. + + + 3.5.1 4.1.3 0.0.2 1.5.17 truncation f.s. (5bp del.) f.s. (7bp del.) 67 aa deln+f.s. f.s. f.s.@(C)6 +STOP STOP STOP fragment STOP STOP f.s. + STOP f.s. @(A)5 ps. + + - 3.4.3 5.1.5 uptake hydrogenase large subunit putative outer membrane protein conserved hypothetical protein PTS system, maltose and glucose-specific IIABC component putative aminotransferase (fragment) Sensor kinase TtrS protein (SPI2) + - 5.1.5 Putative ribokinase (SPI2) + - 5.1.5 pathogenicity island protein + + (C)5 + - 4.1.0 2.1.1 conserved hypothetical periplasmic protein putative nuclease + + + + + + + +? + + 0.0.2 4.1.1 5.1.2 3.5.1 1.6.2 1.5.0 conserved hypothetical protein conserved hypothetical membrane protein putative integrase hydrogenase-1 small subunit periplasmic trehalase putative export protein + (A)6 - 5.1.5 STOP truncation truncation truncation truncation STOP truncation +STOP f.s. @ (A)5 STOP f.s. f.s. @ (A)6 f.s. @ (G)5 50 aa del. f.s. @ (A)4 STOP multiple f.s. multiple f.s. f.s. @ (T)7 f.s. fragment fragment ATG- ps. (d) + + p.s. + 5.1.4 5.1.2 5.1.2 5.1.2 5.1.2 4.1.2 1.5.0 putative invasion-associated secreted protein sopE=STY4609 transposase putative bacteriophage replication protein probable bacteriophage replication protein putative integrase DNA-invertase penicillin-binding protein L-arabinose transport system permease + (A)6 + + + (A)7 + (G)6 + - 4.1.5 4.1.1 3.2.03 3.2.03 3.2.03 flagellar lysine N-methyltransferase protein conserved hypothetical integral membrane protein CbiM protein putative cobalamin biosynthethesis protein precorrin-6x reductase + + (A)5 + + + - 3.2.03 3.4.3 4.1.2 5.1.5 precorrin-8X methylmutase putative propanediol utilization protein PduN penicillin-binding protein secreted effector protein + + 4.1.4 + (T)8 + + + + + 4.1.4 4.1.4 7.0.0 0.0.1 0.0.2 putative extracellular polysaccharide biosynthesis protein putative colanic acid polymerase putative glycosyl transferase rhsF core protein conserved hypothetical protein (partial CDS) conserved hypothetical protein STY2398 STY2418 STY2422 pbpG yeiA mglA STY2432 STY2466a STY2468 STY2469 STY2501 STY2504 STY2613 STY2626 STY2627b STY2631 yfcM gtrB2 - STY2631a STY2668 STY2732 STY2747 - STY2755 shdA STY2758 ratB STY2762 STY2775 STY2797 STY2837 STY2901 STY2915 STY2926 STY2934 sivH yfiE ygaU proV STY3025 STY3029 - STY3042 STY3043 STY3084 STY3169 STY3270 steA speC STY3273 - STY3274 STY3280 STY3282 STY3325 STY3338 STY3356 STY3397 - STY3421 - STY3426 STY3439 STY3518 tdcC - STY3569 acrE >ATA @start STOP f.s. @ (T)6 f.s. @ (G)3 STOP fragment fragment fragment STOP f.s. @ (T)5 f.s. @ (A)3 fragment truncation STOP+tru ncation fragment f.s. STOP f.s. @ (A)10 f.s. (AGAC)2 f.s. + STOP STOP f.s. f.s. f.s. @ (T)1 STOP STOP STOP f.s. @ (A)4 fragment fragment + f.s. truncation truncation STOP STOP 11bp del (f.s.) multiple f.s. fragment fragment fragment STOP STOP f.s. @(A)6 f.s. @A+ STOP f.s.@(A)2 +STOP f.s. STOP 10bp del (f.s.) fragment + + (T)7 + (G)2 + + + 4.1.2 7.0.0 1.5.01 penicillin-binding protein putative pyrimidine metabolism oxidoreductase galactoside transport ATP-binding protein MglA + p.s. p.s. + + (T)6 + (A)2 - + - 1.5.0 2.2.03 5.1.2 5.1.2 1.5.0 6.1.1 0.0.2 5.1.4 4.1.4 5.1.4 putative transport protein UmuC-family protein bacteriophage tail fiber assembly protein putative bacteriophage tail protein putative transmembrane transpot protein putative transcriptional regulator conserved hypothetical protein putative transposase bactoprenol glucosyl transferase putative transposase + - + + (A)6 5.1.2 1.5.37 0.0.2 4.1.0 putative bacteriophage tail protein phosphoenolpyruvate-protein phosphotransferase conserved hypothetical protein putative lipoprotein + AGAC - 5.1.5 conserved hypothetical protein + - 5.1.5 putative lipoprotein + + + + (T)2 + + + + (A)5 + + + 5.1.5 3.5.2 4.1.1 6.1.1 1.5.0 7.0.0 6.1.1 1.5.01 p.s.(d) p.s.(d) - 5.1.4 5.1.4 putative intimin putative anaerobic reductase component putative membrane protein putative transcriptional regulator putative cation transporter conserved hypothetical protein putative transcriptional regulator glycine betaine/L-proline transport ATP-binding protein insertion sequence transposase transposase + + frag. + + + + + + 0.0.2 7.0.0 4.1.5 0.0.2 3.3.14 conserved hypothetical protein putative oxidoreductase fimbrial subunit conserved hypothetical protein ornithine decarboxylase - - 5.1.5 integrase + + + (A)7 + (A)2 + + + 5.1.5 5.1.1 5.1.1 1.1.1 7.0.0 0.0.2 7.0.0 hypothetical protein bacteriocin (fragment) bacteriocin (fragment) methyl-accepting chemotaxis protein possible oxidoreductase conserved hypothetical protein probable oxidoreductase . + (A)3 + 1.5.0 conserved hypothetical transport protein + + + + + 1.5.0 3.4.3 0.0.2 threonine/serine transporter putative sugar kinase conserved hypothetical protein + + 1.4.3 acriflavin resistance protein E STY3570 STY3657 STY3771 STY3800 STY3801 STY3817 acrF yifB cdh - f.s. @ (C)2 phage ins. f.s. @ (A)6 fragment fragment f.s. + (C) + + (A)7 p.s. p.s. + + + - 1.4.3 1.5.40 3.3.19 2.2.07 0.0.0 1.5.0 STY3828 STY3857 STY3867 STY3889 STY3920 STY3954 STY3955 STY3974 STY3983 STY4003 STY4007 STY4012 rhaD yihS yieO stgC torR torC yidH - + + + + + + (C)6 + + + + (A)6 + (G) + + + + + + - 3.4.3 0.0.2 0.0.0 1.5.0 4.1.5 3.5.2 3.5.2 0.0.2 4.1.1 2.2.08 0.0.2 6.1.1 STY4024 STY4027 cigR marT + (A)7 + (A)7 - 5.1.5 5.1.5 putative exported protein conserved hypothetical protein STY4030 misL f.s. STOP STOP STOP STOP f.s. f.s. @ (C)7 STOP STOP STOP f.s. @ (A)5 f.s. @ (G)2 f.s. @ (A)6 STOP +f.s.@(A)6 +2bp acriflavin resistance protein F possible competence protein putative arylsulfate sulfotransferase CDP-diacylglycerol pyrophosphatase hypothetical protein probable transport system periplasmic binding protein rhamnulose-1-phosphate aldolase conserved hypothetical protein hypothetical protein putative transmembrane efflux protein fimbrial membrane usher protein Two-component transcriptional regulatory protein cytochrome C-type protein conserved hypothetical protein putative membrane protein putative sugar-bisphosphate aldolase conserved hypothetical protein putative transcriptional regulator + - 5.1.5 STY4034 STY4035 STY4037 STY4097 STY4123 STY4140 STY4146 STY4166 gudP yiaO yiaH - p.s. p.s. p.s.(d) + + + (T)8 p.s. + (G)7 + + + - 5.1.5 5.1.5 5.1.5 1.5.21 4.1.0 4.1.1 5.1.4 1.5.0 STY4174 STY4184 yhjL fragment fragment STOP STOP IS ins. f.s. @ (T)7 fragment f.s. @ (G)6 fragment multiple putative virulence-associated autotransporter protein putative IS1351 transposase putative transposase conserved hypothetical protein probable glucarate transporter putative periplasmic protein putative membrane protein putative transposase putative permease p.s. + p.s.(d) + 7.0.0 4.1.4 STY4203 STY4217 STY4225 - + + (CG)5 + 3.4.2 4.1.1 1.5.03 STY4244 STY4318 STY4329 STY4335 livJ bigA yhfK yheT + + + + + + + 1.5.23 4.1.4 0.0.1 0.0.2 amino acid-binding protein putative surface-exposed virulence protein conserved hypothetical protein conserved hypothetical protein STY4503 dmsA + - 3.5.2 anaerobic dimethyl sulfoxide reductase chain A STY4506 STY4537 STY4541 STY4541a STY4598 STY4608 STY4633 STY4728 STY4728a STY4820 STY4836a dmsB pilN' pilN' samA pin yjfJ sefA + + + + - + + - 3.5.2 0.0.2 5.1.5 5.1.5 1.4.4 5.1.2 5.1.2 0.0.2 0.0.0 7.0.0 4.1.5 anaerobic dimethyl sulfoxide reductase chain B conserved hypothetical protein PilN lipoprotein homolog PilN lipoprotein homolog UV protection protein DNA-invertase SOS operon tum protein conserved hypothetical protein hypothetical protein hypothetical fused protein fimbrial protein precursor STY4839 sefD fragment f.s. @(T)7 f.s. @(CG)4 STOP f.s. STOP f.s. 77bp del f.s. + STOP STOP STOP f.s. inversion phage ins. truncation f.s. STOP deletion fusion f.s. @ (G)4 f.s. @ (A)7 putative trans-sulfuration enzyme putative polysaccharide biosynthesis protein subunit C L-asparaginase putative membrane protein hypothetical ABC transporter membrane protein - - 4.1.5 putative fimbrial protein STY4841 STY4845 sefR - STY4848 STY4876 STY4883 hsdM STY4892 STY4931 STY4938 STY4941 tsr sthE sthC f.s. @ (A)6 f.s. @ (T)10 f.s. f.s. STOP - - 6.1.1 2.2.09 putative activator protein SefR thiol:disulfide interchange protein + + + 5.1.4 7.0.0 2.2.03 f.s. @ (T)5 deletion f.s. @ (T)5 STOP+ f.s.@(G)6 + (T)6 + + (T)6 + (G)7 + + - 1.1.1 0.0.2 4.1.5 4.1.5 putative transposase putative aldehyde dehydrogenase subunit M of type I restriction - modification system methyl-accepting chemotaxis protein conserved hypothetical protein putative fibrial protein outer membrane usher protein Key: STM: Salmonella typhimurium; Ec: Escherichia coli; -: not present; +: present and intact; ps.: present as pseudogene; (d): different inactivating mutation(s) 3. Genes unique to S. typhi w.r.t. E. coli Gene STY0014 STY0015 STY0016 STY0017 STY0018 STY0019 STY0020 STY0021 STY0033 STY0034 STY0035 STY0036 STY0038 STY0039 STY0040 STY0041 STY0042 STY0043 STY0045 STY0046 STY0049 STY0050 STY0059 STY0061 STY0062 STY0063 STY0064 STY0065 STY0091 STY0093 STY0095 STY0096 STY0097 STY0098 STY0099 STY0113 STY0114 STY0115 STY0117 STY0158 STY0159 STY0170 STY0171 STY0178 STY0179 STY0184 STY0185 STY0186 STY0235 STY0256 STY0257 STY0267 STY0278 STY0286 STY0287 STY0288 STY0289 Gene name citB citA oadB oadA oadG ygbK tnpA tnpA Functional clasification 6.1.1 5.1.2 0.0.2 4.1.1 2.1.3 0.0.0 0.0.0 0.0.1 4.1.0 4.1.1 4.1.1 6.1.1 6.1.1 3.3.19 7.0.0 4.1.0 3.3.19 3.3.19 0.0.0 3.3.19 7.0.0 1.5.0 0.0.0 6.1.1 6.1.1 1.5.0 1.5.0 1.5.0 4.1.0 4.1.0 4.1.0 4.1.1 4.1.0 3.3.19 0.0.0 4.1.0 5.1.4 5.1.4 0.0.0 7.0.0 6.1.1 7.0.0 1.5.0 4.1.0 4.1.0 0.0.2 7.0.0 6.1.1 1.5.0 5.1.4 2.1.3 5.1.4 1.4.3 5.1.5 5.1.5 5.1.5 5.1.5 Start End Function 15020 16094 16499 17049 17873 20004 21198 23341 31278 32162 32549 33368 34511 35339 37103 38773 40128 41720 43198 44308 48368 50447 58943 61103 61791 63545 64859 66650 93425 93940 94586 95086 95774 96050 97351 115278 115571 116031 118231 163397 164472 174007 174957 185869 186191 193338 194599 195592 244959 271076 271774 280088 294737 302488 303120 303553 304545 15967 16438 17032 17492 19972 21155 23060 24045 32123 32449 32998 34363 34816 37057 38674 39534 41621 42910 44181 46023 50407 51820 60145 61789 63410 64846 66634 66889 93655 94362 94876 95280 95998 97354 97662 117713 116011 117239 118650 164386 165413 174957 176363 186153 186982 194609 195582 196359 246261 271534 273537 280546 295912 303120 303542 304548 306428 putative regulatory protein putative phage protein conserved hypothetical protein putative membrane protein putative chitinase hypothetical protein hypothetical protein conserved hypothetical protein putative exported protein putative membrane protein putative membrane protein putative transcriptional regulator (lysR family) putative transcriptional regulator Possible sulfatase putative secreted 5'-nucleotidase putative exported protein putative secreted sulfatase Possible sulfatase regulatory protein hypothetical protein Possible sulfatase putative glycosyl hydrolase putative transport protein hypothetical protein transcriptional regulatory protein citb sensor kinase cita oxaloacetate decarboxylase beta chain oxaloacetate decarboxylase alpha chain oxaloacetate decarboxylase gamma chain putative lipoprotein probable secreted protein probable secreted protein putative membrane protein probable secreted protein puatative sulfatase hypothetical protein probable secreted protein (pseudogene) putative IS element transposase putative IS element transposase hypothetical protein putative aldo/keto reductase putative lysR-family transcriptional regulator putatuve glycosysl hydrolase putative symporter probable secreted protein probable secreted protein conserved hypothetical protein PdxA-like protein putative transcriptional regulator probable sugar transporter (pseudogene) transposase for insertion sequence element IS200 putative secreted chitinase transposase for insertion sequence element IS200 putative drug efflux protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein STY0290 STY0291 STY0292 STY0293 STY0294 STY0295 STY0296 STY0297 STY0298 STY0300 STY0301 STY0302 STY0303 STY0304 STY0305 STY0306 STY0307 STY0308 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 0.0.2 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 306444 306935 307746 308657 309016 311664 311765 312119 312685 314246 314619 315281 315833 316373 317713 319019 319800 320531 306938 307759 308648 308728 311679 311762 312055 312661 314193 314647 315044 315766 316369 317716 319014 319768 320294 324392 STY0310 STY0311 STY0312 STY0313 STY0314 STY0316 STY0317 STY0318 STY0319 STY0320 STY0321 STY0322 STY0323 STY0324 STY0326 STY0327 STY0328 STY0329 STY0332 STY0333 STY0335 STY0336 STY0337 STY0338 STY0339 STY0341 STY0342 STY0343 STY0344 STY0345 STY0346 STY0347 STY0348 STY0349 STY0350 STY0351 STY0352 STY0359 STY0368 STY0369 STY0370 STY0371 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.4 5.1.5 4.1.0 5.1.5 5.1.5 5.1.5 5.1.5 5.1.4 5.1.5 5.1.5 5.1.4 5.1.4 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 0.0.2 4.1.0 4.1.5 4.1.5 4.1.5 324392 325202 325657 326234 326689 327278 327721 328166 328636 330849 331314 335381 336077 336466 339076 339338 339851 340209 341669 342296 342869 343633 346165 347043 348345 348682 349746 349946 350172 351764 352525 353209 355919 357131 357726 359306 360350 368371 378398 378844 379568 380898 325159 325672 326130 326704 327150 327694 328158 328273 330825 331295 335378 336058 336370 338997 339336 339781 340156 340913 342163 342794 343609 346143 346635 347864 348476 349626 349859 350113 350549 352474 353100 355896 356998 357586 358343 360025 360757 369510 378796 379602 380893 383459 safA safE safB safC safD sinR tcfA, tsaA tcfB, tsaB tsaC tcfD, tsaD tinR stbE stbD stbC conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein ClpB-like protein hypothetical protein hypothetical protein conserved hypothetical protein conserved hypothetical protein (pseudogene) hypothetical protein hypothetical protein conserved hypothetical protein probable lipoprotein conserved hypothetical protein putative membrane protein putative membrane protein hypothetical protein probable IcmF-related integral membrane ATP-binding protein (pseudogene) hypothetical protein hypothetical protein probable secreted protein hypothetical protein probable secreted protein probable secreted protein hypothetical protein hypothetical protein Rhs-family protein hypothetical protein Rhs-family protein hypothetical protein hypothetical protein Rhs-family protein conserved hypothetical protein hypothetical protein hypothetical protein IS element transposase (pseudogene) probable lipoprotein probable lipoprotein (pseudogene) periplasmic fimbrial chaperone protein outer-membrane fimbrial usher protein putative fimbrial structural subunit conserved hypothetical protein probable transposase remnant (pseudogene) LysR-family transcriptional regulator SinR hypothetical protein probable transposase remnant (pseudogene) probable transposase remnant (pseudogene) putative fimbrial protein putative fimbrial subunit outer membrane fimbrial user protein putative fimbrail protein transcriptional regulator hypothetical protein possible outer membrane adhesin probable secreted protein conserved hypothetical protein probable secreted protein fimbrial chaperone protein putative fimbrial protein outer membrane fimbrial usher protein STY0372 STY0373 STY0374 STY0375 STY0376 STY0377 STY0378 STY0380 STY0381 STY0382 STY0383 STY0384 stbB stbA 4.1.5 4.1.5 6.1.1 0.0.0 7.0.0 6.1.1 0.0.0 5.1.5 6.1.1 4.1.0 4.1.0 4.1.3 383443 384266 385465 386344 386985 388659 389375 390264 391048 391586 391868 392297 384204 384802 386199 386673 388559 389402 389923 390788 391575 391810 392227 392812 392809 393222 393469 394911 393276 393377 394722 396869 STY0385 STY0386 STY0387 STY0388 mod 0.0.0 0.0.0 1.5.0 2.2.03 STY0389 res 2.2.03 396876 399850 phnV 0.0.0 3.5.3 3.5.3 0.0.0 6.1.1 1.5.0 0.0.0 1.4.3 5.1.4 1.4.2 0.0.2 6.1.1 0.0.0 1.5.02 400126 400342 401742 402769 403089 404257 426228 427110 446265 450278 457512 457903 459365 471575 400227 401745 402752 402993 404093 406347 426941 428309 446723 450880 457877 458595 459691 472366 STY0466 phnU 1.5.02 472360 473229 STY0467 phnT 1.5.01 473232 474341 STY0468 phnS 1.5.03 474347 475360 STY0469 phnR 6.1.1 475558 476277 STY0470 STY0471 STY0476 STY0477 STY0478 STY0479 STY0480 STY0500 STY0501 STY0523 STY0543 STY0556 STY0558 STY0559 STY0560 STY0568 STY0590 STY0598 phnW phnX 3.4.1 3.4.1 4.1.0 0.0.2 0.0.0 4.1.0 0.0.2 5.1.4 7.0.0 0.0.2 4.1.0 4.1.3 4.1.0 1.5.01 1.5.02 1.5.0 4.1.5 4.1.5 476417 477530 482464 483048 483689 483985 484300 507385 507959 530792 549979 562946 564336 565203 566212 574305 596706 603450 477520 478339 483135 483593 483973 484248 485454 507843 509014 531715 550815 564079 565166 566219 566871 575552 597239 604172 STY0391 STY0392 STY0393 STY0394 STY0395 STY0396 STY0413 STY0414 STY0437 STY0440 STY0447 STY0448 STY0450 STY0465 foxA tnpA tnpA sfbA sfbB sfbC fimI fimY fimbrial chaperone protein probable fimbrial protein possible transmembrane regulator hypothetical protein putative rtn protein possible transmembrane regulator hypothetical protein possible outer membrane protein possible transcriptionl regulator probable secreted protein probable lipoprotein putative outer membrane protein fragment (pseudogene) hypothetical protein hypothetical protein putative metabolite transport protein type III restriction-modification system StyLTI enzyme mod type III Restriction-modification system StyLTI enzyme res (pseudogene) hypothetical protein probable terminal oxidase subunit I probable terminal oxidase subunit II hypothetical protein AraC-family transcriptional regulator ferrioxamine B receptor precursor hypothetical protein possible efflux pump transposase for insertion sequence element is200 probable peroxidase conserved hypothetical protein putative deoR-family transcriptional regulator hypothetical protein probable membrane component of 2aminoethylphosphonate transporter probable membrane component of 2aminoethylphosphonate transporter probable ATP-binding component of 2aminoethylphosphonate transporter probable periplasmic binding component of 2aminoethylphosphonate transporter probable regulator of 2-aminoethylphosphonate uptake and metabolism operon 2-aminoethylphosphonate:pyruvate aminotransferase phosphonoacetaldehyde phosphonohydrolase probable secreted protein conserved hypothetical protein hypothetical protein probable secreted protein conserved hypothetical protein transposase for insertion sequence element IS200 putative lyase conserved hypothetical protein probable secreted protein outer membrane protein lipoprotein ABC transporter ATP-binding protein ABC transporter integral membrane protein probable metabolite transport protein fimbrin-like protein FimI (pseudogene) fimbriae Y protein STY0599 STY0600 STY0602 STY0602a 0.0.0 4.1.5 5.1.2 5.1.4 604191 604664 605550 605710 604502 605260 605735 606051 STY0602b 5.1.4 606085 606213 STY0603 5.1.4 606216 606380 STY0605 STY0609 STY0609a 4.1.1 1.4.2 6.1.1 606760 610081 610495 608400 610326 610701 0.0.0 0.0.0 5.1.5 6.1.1 6.1.1 5.1.4 0.0.2 7.0.0 614326 614791 618821 622264 623134 657246 657980 658533 614766 615501 620791 622845 623475 657704 658462 660812 STY0660 7.0.0 660809 661366 STY0661 7.0.0 661366 662133 3.2.03 7.0.0 7.0.0 1.5.0 6.1.1 0.0.0 1.5.0 3.4.3 0.0.2 6.1.1 1.4.3 0.0.0 2.2.03 4.1.1 0.0.0 4.1.4 4.1.4 4.1.4 4.1.4 690526 696693 697051 698273 699294 701827 727357 728712 729838 731339 737499 756978 757169 757913 758250 759249 760426 761332 762594 691620 697034 698223 699226 701222 702207 728661 729851 731241 732265 737984 757109 757735 758248 758990 760343 761319 762465 763364 STY0764 4.1.4 763368 764078 STY0765 STY0767 STY0768 STY0770 STY0802 STY0803 STY0810 STY0820 STY0821 STY0822 STY0823 STY0824 STY0832 0.0.2 0.0.2 0.0.2 0.0.0 1.5.02 1.5.01 4.1.1 3.4.2 3.4.2 3.4.2 3.4.2 3.4.2 0.0.0 764172 766138 766975 768519 799013 800092 806416 816437 817657 818643 819564 821251 831359 765945 766971 768451 768671 800092 800868 807324 817660 818598 819368 821249 822771 831532 STY0615 STY0616 STY0619 STY0622 STY0624 STY0657 STY0658 STY0659 STY0695 STY0700 STY0701 STY0702 STY0703 STY0705 STY0727 STY0728 STY0729 STY0730 STY0737 STY0755 STY0756 STY0757 STY0758 STY0759 STY0760 STY0761 STY0762 fimW cusS apeE ramA tnpA cobD citA citB hutI hutG hutC hutU hutH hypothetical protein fimbriae w protein phage integrase fragment (pseudogene) probable IS element transposase fragment (pseudogene) probable IS element transposase fragment (pseudogene) probable IS element transposase fragment (pseudogene) putative membrane protein possible copper-binding protein putative copper-ion sensor protein fragment (pseudogene) hypothetical protein hypothetical protein outer membrane esterase putative tetR-family transcriptional regulator transcriptional activator RamA transposase for insertion sequence element IS200 conserved hypothetical protein molybdopterin-containing oxidoreductase catalytic subunit molybdopterin-containing oxidoreductase iron-sulfur subunit molybdopterin-containing oxidoreductase membrane anchor subunit putative aminotransferase CobD putative hydrolase N-terminus putative hydrolase C-terminus probable permease putative sigma-54 dependent transcriptional regulator hypothetical protein (pseudogene) citrate-proton symporter citrate utilization protein B conserved hypothetical protein lysR-family transcriptional regulator possible 5-nitroimidazole antibiotic resistance hypothetical protein probable DNA recombinase putative membrane protein hypothetical protein UDP-galactopyranose mutase putative glycosyl transferase galactosyltransferase putative polysaccharide export ABC transporter permease protein (pseudogene) putative polysaccharide export ABC transporter ATPbinding protein conserved hypothetical protein (pseudogene) conserved hypothetical protein conserved hypothetical protein (pseudogene) hypothetical protein ABC transporter permease (FecCD_family) ABC transporter ATP-binding protein putative membrane protein imidazolonepropionase formiminoglutamase histidine utilization repressor urocanate hydratase histidine ammonia-lyase hypothetical protein STY0833 STY0843 STY0845 STY0874 STY0916 STY0917 STY0918 STY0919 STY0945 STY0946 STY0947 STY0948 STY0949 STY0950 STY0965 STY0970 STY0971 STY1005 STY1006 STY1009 STY1011 STY1012 STY1013 STY1014 STY1015 STY1016 STY1017 STY1018 STY1019 STY1020 STY1021 STY1022 STY1023 STY1024 STY1025 STY1026 STY1027 STY1028 STY1029 STY1030 STY1031 STY1032 STY1033 STY1034 STY1035 STY1036 STY1038 STY1039 STY1040 STY1041 STY1042 STY1043 STY1044 STY1045 STY1046 STY1047 STY1048 STY1049 STY1050 STY1051 slrP tnpA acT sopD2 int xis exo, redX betA, redB gam 5.1.5 4.1.1 4.1.1 5.1.4 4.1.1 1.5.37 1.5.37 7.0.0 0.0.0 5.1.2 0.0.0 0.0.1 7.0.0 6.1.1 0.0.0 0.0.0 5.1.5 6.1.1 3.4.5 831540 838807 839704 864041 908730 908948 910323 910653 936885 937244 937728 938216 938913 939882 959804 964234 964573 1003596 1004375 833804 839514 839946 864499 908939 910291 910643 912140 937082 937621 937934 938893 939773 940793 959911 964431 965531 1004057 1005590 1.5.0 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1005836 1008747 1010084 1010373 1010618 1011496 1012638 1013315 1014106 1014493 1014982 1015718 1016177 1017163 1017923 1018267 1018791 1019268 1019934 1020282 1020578 1020876 1021558 1021787 1022132 1022943 1023687 1024883 1025144 1025810 1026186 1026467 1027078 1027660 1028101 1028451 1029169 1030572 1031929 1032678 1033902 1007269 1010087 1010332 1010618 1011499 1012560 1013318 1014100 1014402 1014693 1015386 1016092 1017160 1017912 1018270 1018791 1019264 1019840 1020200 1020443 1020865 1021373 1021797 1022092 1022734 1023554 1024484 1025008 1025593 1026199 1026467 1027081 1027617 1028037 1028361 1029203 1030572 1032038 1032663 1033898 1034408 leucine-rich repeat protein SlrP (pseudogene) putative membrane protein putative membrane protein (pseudogene) transposase for insertion sequence element is200 putative membrane protein possible transport protein putative phosphotransferase enzyme II, B component probable sulfatase hypothetical protein probable integrase remnant hypothetical protein conserved hypothetical protein putative pirin-related protein hypothetical transcriptional activator hypothetical protein hypothetical protein secreted protein sopD homolog (pseudogene) putative transcriptional regulator putative diaminopropionate ammonia-lyase (pseudogene) putative ion:amino acid symporter integrase excisionase putative bacteriophage protein putative DNA methylase putative bacteriophage protein exonuclease bacteriophage recombination protein host-nuclease inhibitor protein prophage Kil protein putative DNA-binding protein putative DNA-binding protein conserved hypothetical bacteriophage protein putative DNA replication protein putative DNA-binding protein conserved hypothetical bacteriophage protein putative methyltransferase hypothetical bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative damage-inducible protein putative bacteriophage protein putative bacteriophage protein hypothetical prophage protein putative prophage antitermination protein putative bacteriophage protein putative lipoprotein putative prophage membrane protein putative prophage membrane protein putative bacteriophage protein putative secreted protein hypothetical prophage protein putative bacteriophage protein putative prophage terminase small subunit putative prophage terminase large subunit putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein STY1052 STY1053 STY1054 STY1055 STY1056 STY1057 STY1058 STY1059 STY1060 STY1061 STY1062 STY1063 STY1064 STY1065 STY1066 STY1067 STY1068 STY1069 STY1070 STY1071 STY1072 STY1073 STY1075 STY1076 STY1077 STY1104 STY1106 STY1108 STY1114 STY1115 STY1117 STY1120 STY1121 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 0.0.1 0.0.1 4.1.0 6.1.1 5.1.4 5.1.4 5.1.5 5.1.5 5.1.5 5.1.5 1034420 1035345 1035886 1036140 1036681 1037045 1037612 1038768 1039212 1039842 1041830 1042417 1042722 1043789 1044292 1045023 1045516 1046268 1046621 1047817 1048497 1050023 1051126 1051463 1052477 1081208 1081781 1082125 1085337 1086003 1086906 1088329 1088687 1035361 1035770 1036143 1036694 1037070 1037608 1038757 1039208 1039664 1041830 1042417 1042719 1043789 1044142 1045023 1045451 1046268 1046621 1047820 1048497 1050008 1050541 1051266 1052164 1052755 1081755 1083271 1082583 1085795 1086683 1087781 1088670 1090372 putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein hypothetical prophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative secreted protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein hypothetical prophage protein hypothetical prophage protein putative DNA invertase (fragment) conserved hypothetical protein conserved hypothetical protein putative secreted protein (pseudogene) putative transcriptional regulator (pseudogene) transposase for insertion sequence element IS200 transposase for insertion sequence element is200 conserved hypothetical protein conserved hypothetical protein cell invasion protein cell invasion protein 5.1.5 5.1.5 5.1.5 6.1.1 3.4.3 1090704 1090875 1091094 1092736 1095652 1090874 1090985 1092563 1094100 1096164 3.4.3 3.4.3 1096182 1097595 1097489 1098035 STY1134 hpaB hpcR, hpaR hpaG conserved hypothetical protein hypothetical protein putative secreted peptidase histidine kinase 4-hydroxyphenylacetate 3-monooxygenase coupling protein 4-hydroxyphenylacetate 3-monooxygenase homoprotocatechuate degradative operon repressor 3.4.3 1098310 1099599 STY1136 hpcC 3.4.3 1099596 1101061 STY1137 STY1138 STY1139 STY1140 3.4.3 3.4.3 3.4.3 3.4.3 1101063 1101924 1102448 1103262 1101914 1102304 1103251 1104053 STY1141 STY1142 hpcB hpcD hpcG hpcH, hpaI hpaX hpaA 1.5.0 3.4.3 1104125 1105511 1105501 1106407 STY1143 STY1149 STY1150 scsA scsB 0.0.0 1.4.2 1.4.2 1106421 1110244 1110655 1107359 1110606 1112541 STY1151 scsC 1.4.2 1112538 1113161 STY1124 STY1125 STY1126 STY1127 STY1130 STY1131 STY1132 tnpA tnpA pipA pipB sigE, pipC sigD, sopB pipD copS hpaC 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta2,4-diene-1,7-dioate isomerase 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (pseudogene) 3,4-dihydroxyphenylacetate 2,3-dioxygenase 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase putative 4-hydroxyphenylacetate permease 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein hypothetical protein membrane protein, suppressor for copper-sensitivity A membrane protein, suppressor for copper-sensitivity B precursor secreted protein, suppressor for copper-sensitivity C STY1152 STY1163 STY1164 STY1165 STY1168 STY1225 STY1264 STY1268 STY1276 STY1280 STY1292 STY1310 STY1320 STY1353 STY1354 STY1358 STY1359 STY1360 STY1361 STY1362 STY1364 STY1365 STY1366 STY1367 STY1375 STY1379 STY1385 STY1386 STY1388 STY1390 STY1391 STY1392 STY1393 STY1394 STY1395 STY1396 STY1397 STY1398 STY1399 STY1400 STY1408 STY1413 STY1415 STY1418 STY1426 STY1434 STY1435 STY1436 STY1437 STY1438 STY1439 STY1439a STY1441 STY1443 STY1444 STY1445 STY1462 STY1463 scsD tnpA sifA tnpA pspE tnpA tnpA sseJ aac 1.4.2 6.1.1 1.5.0 1.5.0 4.1.0 5.1.4 5.1.5 0.0.0 4.1.0 5.1.4 4.1.0 1.5.00 0.0.2 0.0.0 0.0.1 5.1.2 0.0.0 0.0.0 5.1.2 5.1.5 1113151 1125366 1126533 1127503 1130754 1178594 1219329 1224135 1232707 1235316 1250985 1270134 1277897 1314180 1316029 1319577 1319944 1320252 1321082 1321705 1113657 1126247 1127390 1128030 1131446 1179052 1220339 1225469 1233036 1235774 1252514 1270970 1278775 1315562 1316736 1319921 1320117 1320752 1321351 1322180 4.1.0 5.1.2 5.1.2 0.0.0 5.1.2 5.1.4 7.0.0 6.1.1 7.0.0 6.1.1 4.1.0 0.0.0 6.1.1 4.1.0 7.0.0 4.1.0 7.0.0 0.0.0 0.0.2 7.0.0 1.1.1 0.0.0 1.4.3 5.1.4 0.0.0 4.1.1 7.0.0 1.5.01 7.0.0 7.0.0 4.1.1 5.1.5 7.0.0 4.1.0 7.0.0 1.4.3 0.0.0 4.1.1 1322110 1322594 1322944 1323331 1329002 1333722 1338604 1339652 1340834 1342585 1343304 1343754 1345254 1346408 1347328 1349331 1350263 1350926 1351292 1352022 1358082 1363893 1365999 1367421 1377205 1385267 1386954 1387631 1388387 1389041 1390720 1391185 1392475 1396054 1396641 1397817 1412563 1414042 1322535 1322767 1323225 1323468 1329316 1334180 1339533 1340557 1341703 1343175 1343540 1345052 1346105 1347253 1349310 1350164 1350820 1351264 1351978 1352624 1359236 1365452 1366337 1367879 1377654 1386817 1387634 1388362 1389034 1389802 1391064 1391325 1393983 1396629 1397843 1398335 1413513 1414440 precursor secreted protein, suppressor for copper-sensitivity D putative transcriptional regulator putative membrane transporter putative membrane transporter putative secreted protein transposase for insertion sequence element IS200 putative virulence determinant, SifA hypothetical protein putative secreted protein transposase for insertion sequence element IS200 putative secreted protein possible membrane transport protein conserved hypothetical protein hypothetical protein conserved hypothetical protein integrase (fragment) hypothetical protein hypothetical protein hypothetical protein pertussis toxin subunit S1 related protein (pseudogene) hypothetical periplasmic protein bacteriophage gene remnant (pseudogene) DNA-invertase (fragment) hypothetical protein phage shock protein E precursor transposase for insertion sequence element IS200 putative oxidoreductase putative transcriptional regulator putative oxidoreductase putative transcriptional regulator putative lipoprotein hypothetical protein putative transcriptional regulator putative lipoprotein invasin-like protein putative exported protein putative thiol peroxidase hypothetical protein conserved hypothetical protein conserved hypothetical DNA-binding protein putative chemo-receptor protein hypothetical protein putative multidrug transporter transposase for insertion sequence element IS200 hypothetical protein putative membrane protein putative amino acid ABC transporter ABC transporter ATP-binding subunit putative ABC amino acid transporter permease putative periplasmic amino acid-binding protein putative membrane protein secreted effector J (pseudogene) putative esterase putative exported protein putative glycolate oxidase aminoglycoside 6'-N-acetyltransferase hypothetical protein hypothetical 15.2 kDa protein, putative membrane protein STY1464 STY1465 STY1470 STY1471 STY1472 STY1480 STY1482 STY1490 STY1491 STY1491a STY1499 STY1502 STY1503 STY1504 STY1505 STY1507 STY1508 STY1509 STY1513 STY1514 STY1515 STY1517 STY1518 STY1519 STY1520 STY1521 STY1522 STY1528 STY1531 STY1533 STY1570 STY1571 STY1572 STY1573 STY1580 STY1591 STY1592 STY1593 STY1594 STY1595 STY1596 STY1597 STY1598 STY1599 STY1600 STY1601 STY1602 STY1603 STY1604 STY1605 STY1606 STY1607 STY1608 STY1609 STY1610 STY1611 STY1612 STY1613 STY1614 STY1615 srfC srfB srfA smvA glgX pqaA tnpA gam eha 0.0.1 2.1.4 0.0.1 0.0.1 0.0.1 4.1.0 0.0.0 6.1.1 1.4.3 0.0.2 0.0.0 4.1.0 7.0.0 7.0.0 2.1.3 7.0.0 7.0.0 0.0.0 7.0.0 6.1.1 7.0.0 1.4.3 0.0.0 1.5.00 7.0.0 6.1.1 7.0.0 3.5.1 7.0.0 4.1.0 1.5.02 1.5.03 1.5.02 1.5.01 5.1.4 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1414473 1414966 1419337 1421481 1424467 1433112 1435416 1446547 1447243 1448758 1456097 1457973 1458887 1460668 1463253 1465441 1466582 1467383 1469419 1470680 1471213 1472365 1473676 1475409 1476670 1477754 1478591 1484326 1486099 1487971 1520264 1521003 1521915 1522562 1529647 1538899 1539260 1539702 1539907 1540134 1540814 1541022 1541402 1541714 1541983 1542275 1542833 1543105 1414703 1415736 1421484 1424462 1425666 1433333 1436048 1447125 1448730 1449193 1456801 1458758 1460671 1463196 1465064 1466622 1467202 1468555 1470498 1471168 1472375 1473606 1475232 1476695 1477695 1478545 1479682 1484625 1486869 1488513 1520974 1521905 1522562 1523710 1530105 1539288 1539712 1539917 1540137 1540817 1541029 1541405 1541704 1541986 1542177 1542805 1543102 1544075 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1544282 1546055 1546229 1546722 1547496 1547849 1548347 1548561 1549208 1549534 1549845 1550387 1546051 1546219 1546660 1547252 1547846 1548268 1548577 1549211 1549534 1549845 1550390 1551982 conserved hypothetical protein D-alanyl-D-alanine dipeptidase PcgL precursor conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein putative lipoprotein hypothetical protein putative regulatory protein methyl viologen resistance protein SmvA conserved hypothetical protein (pseudogene) hypothetical protein putative secreted protein putative hydrolase putative hydrolase putative glycogen debranching protein putative aminotransferase putative transport protein (pseudogene) hypothetical protein putative isomerase putative regulatory protein putative oxygenase (pseudogene) putative multidrug efflux protein hypothetical protein membrane transport protein putative alcohol dehydrogenase putative regulatory protein putative secreted hydrolase hydrogenase isoenzymes formation protein putative ATP/GTP-binding protein putative exported protein putative ABC transporter membrane protein putative ABC transporter periplasmic binding protein putative ABC transporter membrane protein putative ABC transporter ATP/GTP-binding protein transposase for insertion sequence element IS200 putative bacteriophage transcriptional regulator conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein bacteriophage host-nuclease inhibitor protein hypothetical protein putative bacteriophage GSP secretion protein Eha (pseudogene) hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein putative lipoprotein putative membrane protein hypothetical protein hypothetical protein conserved hypothetical protein STY1616 STY1617 STY1618 STY1619 STY1620 STY1621 STY1622 STY1623 STY1624 STY1625 STY1626 STY1627 STY1628 STY1629 STY1630 STY1631 STY1632 STY1633 STY1634 STY1635 STY1636 STY1637 STY1638 STY1639 STY1640 STY1641 STY1642 STY1643 STY1648 STY1650 STY1698 STY1699 STY1700 STY1701 STY1702 STY1703 STY1704 STY1705 STY1706 STY1707 STY1708 STY1709 STY1710 STY1711 STY1712 STY1713 STY1714 STY1715 STY1716 STY1717 STY1718 STY1719 STY1720 STY1721 STY1722 STY1723 STY1724 STY1725 STY1726 STY1727 STY1728 ssaU ssaT ssaS yscR ssaQ ssaP ssaO ssaN ssaV ssaL ssaK ssaK ssaJ ssaI ssaH ssaG sseG sseF sscB sseE sseD sseC sscA sseB sseA ssaE ssaD 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 0.0.0 0.0.2 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 1551982 1553459 1554283 1554956 1556086 1557049 1557389 1557835 1558296 1558540 1559967 1560491 1560870 1561381 1563846 1564727 1564930 1566081 1566665 1567003 1568099 1568680 1569707 1570219 1570843 1571330 1571802 1572347 1575901 1577621 1625241 1626296 1627076 1627339 1628054 1629003 1629358 1629738 1631029 1633059 1633485 1634467 1635138 1635704 1636450 1636710 1636978 1637287 1637973 1638771 1639257 1639676 1640279 1641736 1642206 1642803 1643332 1643582 1644774 1646269 1647071 1553478 1554280 1554741 1556071 1557039 1557387 1557835 1558299 1558550 1559967 1560488 1560772 1561205 1563846 1564730 1564942 1566084 1566608 1567012 1568106 1568677 1569705 1570219 1570836 1571328 1571800 1572284 1572919 1576260 1579327 1626299 1627075 1627342 1627986 1629022 1629377 1629735 1631039 1633074 1633427 1634477 1635141 1635686 1636453 1636698 1636937 1637193 1637976 1638755 1639205 1639673 1640263 1641733 1642209 1642796 1643129 1643574 1644793 1646267 1646652 1649833 hypothetical protein hypothetical protein putative bacteriophage protein hypothetical protein hypothetical protein putative membrane protein conserved bacteriophage hypothetical protein hypothetical protein hypothetical protein bacteriophage tail sheath protein tail core protein hypothetical protein hypothetical protein putative bacteriophage protein hypothetical protein putative bacteriophage tail fibre protein putative bacteriophage regulatory protein putative bacteriophage baseplate protein putative bacteriophage baseplate protein putative bacteriophage baseplate assembly protein putative bacteriophage tail fiber protein bacteriophage tail fiber protein alternative bacteriophage tail fiber C-terminus putative bacteriophage tail fiber assembly protein alternative bacteriophage tail fiber C-terminus alternative bacteriophage tail fiber C-terminus alternative bacteriophage tail fiber C-terminus DNA-invertase hypothetical protein conserved hypothetical protein putative type III secretion protein putative type III secretion protein putative type III secretion protein putative type III secretion protein putative type III secretion protein putative type III secretion protein putative type III secretion protein putative type III secretion ATP synthase putative type III secretion protein putative pathogenicity island protein putative secretion system protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island lipoprotein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative pathogenicity island protein putative Type III secretion system chaperone protein putative pathogenicity island effector protein putative pathogenicity island protein putative secretion system protein putative pathogenicity island protein putative outer membrane secretory protein putative pathogenicity island protein putative two-component sensor kinase STY1729 STY1730 STY1731 STY1733 STY1735 STY1736 STY1737 STY1738 STY1739 STY1741 STY1742 STY1743 STY1755 STY1779 STY1779a STY1781 STY1782 STY1783 STY1794 STY1829 STY1842 STY1844 STY1847 STY1848 STY1852 STY1853 STY1854 STY1855 STY1856 STY1857 STY1859 STY1860 STY1861 STY1862 STY1863 STY1864 STY1865 STY1867 STY1869 STY1870 STY1871 STY1873 STY1874 STY1874a STY1874b STY1875 STY1876 STY1877 STY1878 STY1879 STY1880 STY1880a STY1881 STY1882 STY1883 STY1884 STY1886 STY1887 STY1889 STY1890 STY1891 ssrB ttrR ttrS ttrB ttrC ttrA rfc tnpA tnpA aroQ aadA pagC pagD cspH envE msgA cdtB 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 1.5.00 4.1.4 0.0.0 2.1.1 4.1.1 4.1.3 5.1.4 6.1.1 0.0.0 5.1.4 0.0.0 4.1.1 3.1.05 0.0.0 0.0.0 6.1.1 6.1.1 1.4.3 0.0.2 4.1.1 1.5.01 1.5.01 1.5.00 1.5.00 1.5.00 4.1.0 0.0.0 0.0.0 1.3.1 0.0.0 4.1.0 0.0.0 0.0.0 4.1.0 0.0.0 0.0.0 5.1.5 0.0.0 0.0.0 5.1.5 1.3.1 4.1.0 5.1.5 5.1.2 5.1.5 0.0.0 0.0.2 5.1.5 5.1.5 1649864 1650681 1651581 1652946 1653541 1655478 1656231 1657246 1660631 1661861 1662657 1663367 1674560 1701377 1702923 1703302 1704154 1704611 1715544 1746826 1758799 1759921 1760830 1761136 1763561 1764189 1764423 1764926 1765843 1766581 1768322 1768842 1770057 1770641 1771432 1772234 1773208 1775546 1776622 1777746 1778004 1778669 1779096 1779297 1779441 1779602 1780271 1780996 1781177 1782112 1782326 1782539 1782934 1783564 1784276 1784727 1785388 1786270 1786795 1787529 1788274 1650502 1651409 1652540 1653566 1655314 1656230 1657253 1660308 1661849 1662598 1663319 1664710 1675906 1702600 1703129 1704157 1704468 1705570 1716002 1748022 1759110 1760379 1761015 1761783 1764106 1764344 1764671 1765774 1766436 1767369 1768648 1769975 1770647 1771438 1772244 1773211 1774842 1775860 1777665 1777895 1778474 1778896 1779221 1779386 1779530 1779943 1780444 1781166 1781734 1782240 1782490 1782802 1783146 1784085 1784515 1784933 1786197 1786647 1787337 1788257 1788687 putative two-component response regulator putative transcriptional regulator putative pathogenicity island protein putative two-component response regulator TtrS protein (pseudogene) tetrathionate reductase subunit B tetrathionate reductase subunit C (membrane protein) tetrathionate reductase subunit A Putative ribokinase (pseudogene) Orf 245 protein, putative pathogenicity island protein putative pathogenicity island protein (pseudogene) putative amino acid permease putative transporter O-antigen polymerase hypothetical protein putative nuclease (pseudogene) putative membrane protein putative outer membrane protein transposase for insertion sequence element IS200 putative regulatory protein hypothetical protein transposase for insertion sequence element IS200 hypothetical protein putative membrane protein putative chorismate mutase hypothetical protein hypothetical protein putative transcriptional regulator putative regulatory protein aminoglycoside-resistance protein conserved hypothetical protein putative membrane protein putative ABC transport ATP-binding subunit putative ABC transport ATP-binding protein putative inner membrane transport protein putative inner membrane transport protein putative substrate-binding transport protein putative lipoprotein hypothetical protein hypothetical protein putative heat shock protein hypothetical protein putative lipoprotein hypothetical protein hypothetical protein putative secreted protein hypothetical protein hypothetical protein outer membrane invasion protein hypothetical protein hypothetical protein putative outer membrane virulence protein putative cold shock protein putative lipoprotein putative virulence protein putative integrase (pseudogene) putative toxin-like protein hypothetical protein conserved hypothetical protein putative pertussis-like toxin subunit putative pertussis-like toxin subunit STY1893 STY1895 STY1911 STY1922 STY1937 STY1940 STY1965 5.1.2 5.1.4 0.0.0 3.1.07 0.0.1 0.0.0 1.7.1 1789728 1791357 1804670 1815290 1830754 1831532 1855187 1790852 1791815 1805935 1816459 1831095 1831669 1856932 putative bacteriophage protein transposase for insertion sequence element IS200 hypothetical protein glutamate dehydrogenase conserved hypothetical protein hypothetical protein penicillin-binding protein 2.2.09 1872287 1872937 serine/threonine protein phosphatase 1 0.0.0 5.1.5 1873161 1873610 1873325 1874331 0.0.1 0.0.0 7.0.0 0.0.0 0.0.0 5.1.4 4.1.1 0.0.0 4.1.1 0.0.0 7.0.0 0.0.2 0.0.0 6.1.1 5.1.2 1875015 1875739 1876603 1877393 1877792 1878054 1881004 1882051 1882219 1883033 1883242 1885617 1886884 1887201 1887450 1875410 1876215 1877022 1877659 1877968 1879214 1881918 1882209 1882833 1883224 1885221 1886747 1887057 1887428 1887551 STY2009 5.1.2 1887552 1887913 STY2011 STY2012 STY2013 STY2014 STY2015 STY2016 STY2017 STY2018 STY2019 STY2020 STY2021 STY2022 STY2023 STY2024 STY2025 STY2026 STY2027 STY2028 STY2029 STY2030 STY2031 STY2032 STY2033 STY2034 STY2035 STY2036 STY2037 STY2038 STY2039 STY2040 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1887993 1888674 1889471 1890004 1891515 1892192 1893392 1893761 1893986 1894800 1895228 1896154 1896486 1897520 1897826 1898476 1900606 1901062 1901514 1902663 1903201 1903577 1904128 1904501 1904911 1905864 1906366 1907613 1908238 1909704 1888193 1888886 1889989 1891515 1892195 1893391 1893745 1893898 1894741 1895228 1895959 1896489 1897517 1897822 1898476 1900428 1901058 1901502 1902659 1903211 1903590 1904131 1904535 1904869 1905852 1906361 1907598 1908143 1909704 1911107 hypothetical protein putative invasion-associated secreted protein (pseudogene) conserved hypothetical protein hypothetical protein putative acetyltransferase hypothetical protein hypothetical protein transposase (pseudogene) putative membrane protein hypothetical protein putative membrane protein hypothetical protein putative hydrolase conserved hypothetical protein hypothetical protein putative DNA-binding protein putative bacteriophage replication protein (pseudogene) probable bacteriophage replication protein (pseudogene) putative integrase (pseudogene) DNA-invertase (pseudogene) putative bacteriophage tail protein putative bacteriophage tail protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative exported protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein putative bacteriophage protein STY1984 STY1986 STY1987 STY1988 STY1990 STY1991 STY1993 STY1994 STY1995 STY2000 STY2001 STY2002 STY2003 STY2004 STY2005 STY2006 STY2007 STY2008 tnpA gdhA ftsI2, pbpB2 pphA, prpA sopE2 yjcS STY2041 STY2042 STY2043 STY2044 STY2045 STY2046 STY2047 STY2048 STY2049 STY2050 STY2051 STY2052 STY2053 STY2054 STY2055 STY2056 STY2057 STY2058 STY2059 STY2060 STY2061 STY2062 STY2063 STY2064 STY2065 STY2066 STY2067 STY2068 STY2069 STY2070 STY2071 STY2072 STY2073 STY2074 STY20074a STY2075 STY2076 STY2077 STY2104 STY2118 STY2120 STY2135 STY2140 STY2147 STY2148 STY2149 STY2151 STY2152 STY2156 STY2166 STY2175 STY2207 STY2209 STY2210 STY2212 STY2213 STY2214 STY2215 STY2217 STY2222 hokW kil, ydaD racC recE lar fliB, nml cbiP 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.4 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1911073 1911880 1912209 1912585 1913065 1913483 1913754 1914557 1915298 1915387 1915938 1916228 1916899 1917389 1917646 1917993 1919308 1920237 1920890 1921304 1921742 1922526 1923279 1924145 1924564 1924903 1925628 1925785 1925965 1926656 1926877 1927122 1927497 1930637 1931753 1911822 1912092 1912601 1913061 1913406 1913785 1914323 1915114 1915393 1915941 1916228 1916827 1917150 1917544 1917789 1919201 1920240 1920791 1921297 1921726 1922554 1923272 1924067 1924567 1924806 1925322 1925783 1925988 1926261 1926877 1927047 1927397 1930625 1931689 1931947 5.1.2 5.1.2 5.1.2 4.1.1 4.1.2 0.0.2 0.0.0 0.0.2 0.0.0 0.0.0 4.1.0 0.0.0 0.0.0 0.0.0 4.1.5 4.1.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 3.2.03 1931940 1932235 1932482 1956684 1969479 1971404 1987711 1991102 1996817 1996951 1997355 1999008 1999201 2003441 2009890 2019141 2045298 2046987 2047166 2049539 2049689 2050009 2050392 2052806 2056413 1932128 1932516 1933558 1957358 1971350 1972540 1987827 1991659 1996933 1997142 1998788 1999208 1999338 2003596 2011094 2019494 2045459 2047163 2047339 2049700 2050015 2050395 2050472 2052976 2057933 putative bacteriophage protein hypothetical protein putative bacteriophage protein putative endolysin putative bacteriophage protein hypothetical protein putative membrane protein putative bacteriophage protein hypothetical protein hypothetical protein putative bacteriophage protein hypothetical protein putative bacteriophage cohesive ends undefined product hypothetical protein putative transposase hypothetical protein putative membrane protein putative bacteriophage protein hypothetical protein conserved hypothetical protein putative DNA replication protein conserved hypothetical protein conserved hypothetical protein putative cro repressor putative regulator conserved hypothetical protein conserved hypothetical protein hypothetical protein putative cell division inhibitor protein putative bacteriophage protein putative bacteriophage protein exodeoxyribonuclease VIII conserved hypothetical protein restriction alleviation and modification enhancement protein conserved hypothetical protein putative excisionase putative integrase putative membrane protein penicillin-binding protein (pseudogene) conserved hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein putative exported protein hypothetical protein hypothetical protein hypothetical protein lysine-N-methylase (pseudogene) putative exported protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein putative cobyric acid synthase STY2223 STY2224 STY2225 STY2226 STY2228 STY2229 cbiO cbiQ cbiN cbiM cbiL cbiK 1.5.01 1.5.02 3.2.03 3.2.03 3.2.03 3.2.03 2057930 2058754 2059418 2059701 2060434 2061144 2058745 2059431 2059699 2060437 2061147 2061937 STY2231 STY2232 STY2233 STY2234 STY2235 STY2236 cbiJ cbiH cbiG cbiF cbiT cbiE 3.2.03 3.2.03 3.2.03 3.2.03 3.2.03 3.2.03 2061940 2062727 2063452 2064488 2065245 2065813 2062730 2063452 2064507 2065261 2065823 2066418 STY2237 STY2238 STY2239 STY2240 STY2241 STY2242 STY2243 STY2244 STY2245 STY2246 STY2247 STY2248 STY2249 STY2250 STY2251 STY2252 STY2253 STY2254 cbiD cbiC cbiB cbiA pocR pduF pduA pduB pduC pduD pduE pduG pduH pduJ pduK pduL pduM pduN 3.2.03 3.2.03 3.2.03 3.2.03 6.1.1 1.5.22 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 3.4.3 0.0.1 0.0.1 3.4.3 2066412 2067551 2068041 2068997 2070973 2072104 2073423 2073815 2074535 2076210 2076899 2077627 2079449 2079819 2080098 2080580 2081209 2081704 2067551 2068030 2069000 2070421 2071887 2072898 2073707 2074516 2076199 2076884 2077420 2079459 2079799 2080094 2080580 2081212 2081700 2081978 STY2255 STY2256 pduO pduP 0.0.2 3.4.3 2081988 2082995 2082998 2084389 STY2257 STY2258 STY2259 STY2260 STY2261 STY2262 STY2263 STY2269 STY2270 STY2271 STY2275 STY2291 pduQ pduS pduT 3.4.3 3.5.3 3.4.3 3.4.3 3.4.3 3.4.3 0.0.1 3.5.2 3.5.2 3.5.2 5.1.5 4.1.4 2084401 2085537 2086868 2087422 2087777 2088214 2089486 2094093 2094854 2095447 2098342 2117712 2085513 2086865 2087422 2087772 2088229 2089428 2090388 2094857 2095432 2097723 2100684 2119142 STY2292 STY2293 rfbK rfbM2, manC2, cpsB2 rfbN rfbU rfbV rfbX rfbE rfbS rfbH rfbG 4.1.4 4.1.4 2119214 2120634 2120647 2122073 putative cobalt transport ATP-binding protein CbiO putative cobalt transport protein CbiQ putative cobalt transport protein CbiN CbiM protein (pseudogene) precorrin-2 C20-methyltransferase putative cobalamin biosynthethesis protein (pseudogene) precorrin-6x reductase (pseudogene) precorrin-3 C17-methyltransferase CbiG protein precorrin-4 C11-methyltransferase precorrin-8W decarboxylase precorrin-6Y C5,15-methyltransferase [decarboxylating] CbiD protein precorrin-8X methylmutase (pseudogene) CbiB protein cobyrinic acid A,C-diamide synthase pdu/cob regulatory protein PocR propanediol diffusion facilitator putative propanediol utilization protein PduA putative propanediol utilization protein PduB glycerol dehydratase large subunit diol dehydratase medium subunit diol dehydratase small subunit PduG protein PduH protein putative propanediol utilization protein PduJ putative propanediol utilization protein PduK conserved hypothetical protein conserved hypothetical protein putative propanediol utilization protein PduN (pseudogene) conserved hypothetical protein putative CoA-dependent proprionaldehyde dehydrogenase putative propanol dehydrogenase putative ferredoxin putative propanediol utilization protein PduT putative propanediol utilization protein PduU putative propanediol utilization protein PduV putative propionate kinase conserved hypothetical protein thiosulfate reductase cytochrome b subunit thiosulfate reductase electron transport protein PhsB thiosulfate reductase precursor secreted protein (pseudogene) undecaprenyl-phosphate galactosephosphotransferase phosphomannomutase mannose-1-phosphate guanylyltransferase 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 4.1.4 2122074 2123019 2124655 2125658 2127027 2128040 2128914 2130254 2123018 2124080 2125656 2126956 2128043 2128879 2130227 2131333 putative rhamnosyltransferase putative glycosyltransferase putative glycosyltransferase putative O-antigen transporter CDP-tyvelose-2-epimerase paratose synthase putative dehydratase RfbH CDP-glucose 4,6-dehydratase STY2294 STY2295 STY2296 STY2297 STY2298 STY2299 STY2300 STY2301 pduV pduX phsC phsB phsA sopA rfbP STY2302 STY2303 STY2345 STY2346 STY2347 STY2348 STY2349 STY2350 STY2351 STY2352 STY2353 STY2355 STY2356 STY2357 STY2358 STY2359 STY2359a STY2360 STY2361 STY2362 STY2363 STY2364 STY2366 STY2367 STY2368 STY2382 STY2386 STY2405 STY2406 STY2407 STY2408 STY2409 STY2410 STY2419 STY2420 STY2429 STY2430 STY2431 STY2432 STY2444 STY2445 STY2462 STY2466a STY2467 STY2468 STY2469 STY2470 STY2471 STY2497 STY2500 STY2501 STY2504 STY2509 STY2510 STY2516 STY2517 STY2545 STY2559 STY2570 rfbF rfbI yehE insB insA sdaC sspH2 tnpA 4.1.4 4.1.4 0.0.0 0.0.0 0.0.0 0.0.0 4.1.0 4.1.0 4.1.0 0.0.0 4.1.0 4.1.0 0.0.0 0.0.0 0.0.2 0.0.0 7.0.0 0.0.1 4.1.0 0.0.0 0.0.0 4.1.0 0.0.2 4.1.1 0.0.0 0.0.1 4.1.0 3.4.3 7.0.0 7.0.0 3.4.3 1.5.0 6.1.1 5.1.4 5.1.4 7.0.0 3.4.2 7.0.0 1.5.0 4.1.1 0.0.0 4.1.1 2.2.03 4.1.4 5.1.2 2131338 2132127 2183491 2183793 2184687 2185405 2187521 2188394 2189209 2189768 2190285 2190874 2191545 2191793 2192559 2193190 2193505 2193988 2194299 2194958 2195153 2195375 2198158 2198696 2199396 2213488 2218225 2237354 2238562 2239215 2239932 2240981 2242465 2249467 2249889 2258645 2259039 2260623 2261543 2275328 2275995 2293213 2297530 2297837 2300372 2132111 2133101 2183793 2184677 2185394 2187516 2188240 2189107 2189652 2190217 2190764 2191476 2191823 2192488 2193059 2193492 2193863 2194134 2194718 2195056 2195350 2195992 2198574 2199031 2199512 2213769 2218755 2238547 2239206 2239916 2240969 2242339 2243373 2249970 2250164 2259034 2260406 2261510 2262865 2275993 2276117 2293833 2297730 2300203 2300827 5.1.2 5.1.5 0.0.0 5.1.4 7.0.0 1.5.0 2301136 2301966 2302361 2330729 2334419 2335636 2301918 2302169 2302621 2331187 2335621 2336961 6.1.1 1.5.0 6.1.1 4.1.1 0.0.1 6.1.1 0.0.0 3.3.0 2337200 2342844 2344196 2352222 2352415 2378234 2394916 2408171 2337894 2344034 2345074 2352425 2353368 2379238 2395068 2409124 glucose-1-phosphate cytidylyltransferase putative reductase RfbI hypothetical protein hypothetical protein hypothetical protein hypothetical protein putative exported protein putative exported protein putative exported protein hypothetical protein putative exported protein putative exported protein hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein RhsF core protein (pseudogene) conserved hypothetical protein (partial CDS) putative exported protein hypothetical protein hypothetical protein putative exported protein conserved hypothetical protein putative membrane protein hypothetical protein conserved hypothetical protein putative lipoprotein putative n-hydroxybenzoate hydroxylase glutathione-S-transferase-family protein FAA-hydrolase-family protein putative gentisate 1,2-dioxygenase putative n-hydroxybenzoate transporter putative transcriptional regulator insertion element IS1 protein InsB insertion element IS1 protein InsA putative DNA-binding protein putative L-serine dehydratase putative hydrolase putative transport protein (pseudogene) putative membrane protein hypothetical protein putative membrane protein UmuC-family protein (pseudogene) secreted protein H2 bacteriophage tail fiber assembly protein (pseudogene) putative bacteriophage tail protein (pseudogene) homolog of virulence protein msgA hypothetical protein transposase for insertion sequence element IS200 putative MR-MLE-family protein putative transmembrane transpot protein (pseudogene) putative transcriptional regulator (pseudogene) putative transmembrane transport protein putative transcriptional regulator putative membrane protein conserved hypothetical protein putative receptor/regulator protein hypothetical protein putative transketolase C-terminal section STY2571 STY2572 STY2573 STY2574 STY2575 STY2587 STY2588 STY2589 STY2590 STY2591 STY2604 STY2605 STY2606 STY2607 STY2608 STY2626 STY2629 3.3.0 4.1.1 3.3.0 3.3.0 6.1.1 1.5.0 0.0.2 1.5.0 3.1.0 6.1.1 5.1.2 5.1.2 0.0.0 4.1.0 0.0.2 5.1.4 4.1.4 2409117 2409944 2411356 2411709 2412405 2422315 2423668 2424773 2426285 2427893 2440971 2441517 2441934 2442302 2442887 2461018 2462589 2409947 2411335 2411628 2412152 2413424 2423604 2424771 2426194 2427682 2429320 2441345 2441765 2442302 2442820 2443543 2461233 2464511 STY2631 STY2631a STY2632 STY2633 pgtE, prtA pgtA 5.1.4 5.1.2 4.1.3 6.1.1 2464628 2465525 2465992 2467198 2465128 2465770 2466930 2468445 STY2634 pgtB 6.1.1 2468435 2470441 STY2635 pgtC 6.1.1 2470438 2471631 STY2637 STY2640 STY2646 STY2647 STY2671 STY2674 STY2675 STY2689 STY2690 STY2707 STY2712 STY2731 STY2732 STY2749 STY2750 STY2755 STY2756 STY2758 STY2760 STY2761 STY2762 STY2772 STY2773 STY2774 STY2775 pgtP tnpA 1.5.0 5.1.4 7.0.0 1.5.41 0.0.0 6.1.1 7.0.0 4.1.1 0.0.0 5.1.4 0.0.0 1.5.0 0.0.2 0.0.2 0.0.0 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 3.5.2 3.5.2 3.5.2 3.5.2 2472067 2475976 2480998 2482830 2508137 2509322 2510629 2522340 2522798 2539538 2545770 2567612 2568948 2586659 2587425 2592456 2597945 2599532 2605324 2611836 2612862 2624844 2625707 2626509 2627135 2473458 2476434 2482650 2483828 2508376 2510614 2511348 2522669 2524075 2539996 2546000 2568880 2570135 2587348 2587583 2597379 2599525 2605212 2611716 2612801 2615051 2625707 2626516 2627138 2629512 0.0.0 3.5.2 3.5.2 3.5.2 4.1.1 4.1.0 1.5.37 7.0.0 2638216 2650555 2651602 2652431 2653445 2654421 2679294 2680666 2638884 2651598 2652420 2653444 2654373 2655059 2680655 2681559 STY2780 STY2794 STY2795 STY2796 STY2797 STY2799 STY2816 STY2817 ptsJ tnpA shdA ratC ratB ratA sinI sivH, sinH asrA asrB asrC putative transketolase N-terminal section putative membrane protein putative sugar phosphotransferase component II B putative sugar phosphotransferase component II A putative transcriptional regulator putative amino acid permease conserved hypothetical protein putative amino acid transporter putative amino acid decarboxylase putative transcriptional regulator putative bacteriophage protein putative DNA-binding protein hypothetical protein putative lipoprotein conserved hypothetical protein putative transposase (pseudogene) putative lipopolysaccharide modification acyltransferase putative transposase (pseudogene) putative bacteriophage tail protein (pseudogene) outer membrane protease E, protease VII precursor phosphoglycerate transport system transcriptional regulatory protein PgtA phosphoglycerate transport system sensor protein PgtB phosphoglycerate transport regulatory protein PgtC precursor phosphoglycerate transporter protein transposase for insertion sequence element IS200 putative decarboxylase putative ion-channel protein hypothetical protein putative transcriptional regulator putative amidotransferase putative membrane protein hypothetical protein transposase for insertion sequence element IS200 hypothetical protein putative permease conserved hypothetical protein (pseudogene) conserved hypothetical protein hypothetical protein conserved hypothetical protein (pseudogene) conserved hypothetical protein putative lipoprotein (pseudogene) putative exported protein putative exported protein putative intimin (pseudogene) putative polyferredoxin putative anaerobic reductase component putative anaerobic reductase component putative anaerobic reductase component (pseudogene) hypothetical protein anaerobic sulfite reductase subunit A anaerobic sulfite reductase subunit B anaerobic sulfite reductase subunit C putative membrane protein (pseudogene) putative exported protein putative PTS system IIBC component putative phophosugar binding protein STY2819 STY2820 STY2821 STY2848 STY2855 STY2867 STY2875 STY2876 STY2877 STY2878 STY2879 STY2880 STY2881 STY2882 STY2883 STY2884 STY2885 STY2886 STY2887 STY2888 STY2889 STY2890 STY2891 STY2892 STY2893 STY2894 STY2895 STY2897 STY2899 STY2900 STY2901 STY2903 STY2904 STY2905 STY2906 STY2907 STY2908 STY2926 STY2928 STY2942 STY2966 STY2983 STY2984 STY2985 STY2986 STY2986a STY2987 STY2988 STY2989 iroB iroC iroD iroE iroN virK mig-14 tctE tctD sitA sitB sitC sitD sprB sprA, hilC 7.0.0 1.5.0 6.1.1 0.0.2 0.0.2 0.0.0 5.1.5 5.1.5 5.1.5 5.1.5 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 2682562 2683501 2684813 2711380 2725258 2736857 2743495 2754433 2755839 2758027 2759733 2760475 2760910 2761219 2762316 2762798 2765868 2766002 2766359 2766884 2768199 2769449 2770645 2774411 2775687 2776664 2683479 2684697 2685724 2711835 2726166 2737414 2754369 2755842 2757995 2759190 2760506 2760663 2761128 2762319 2762801 2765875 2765987 2766304 2766874 2768056 2768771 2770564 2774301 2775655 2776604 2778844 5.1.2 5.1.2 5.1.2 6.1.1 1.5.0 6.1.1 6.1.1 0.0.0 4.1.0 4.1.1 4.1.1 6.1.1 0.0.2 1.5.0 4.1.0 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 2779174 2779866 2781435 2782658 2784279 2785422 2786824 2787537 2787653 2788477 2788919 2802627 2804050 2817449 2843759 2859262 2860176 2860994 2861845 2862665 2862970 2864110 2865343 2779416 2780918 2782364 2783554 2785289 2786837 2787498 2787656 2788462 2788908 2790433 2803961 2804481 2818819 2844538 2860179 2860997 2861854 2862693 2862874 2863725 2864997 2865795 STY2991 orgAb 5.1.5 2865811 2866482 STY2991 orgAa 5.1.5 2866439 2867017 STY2992 STY2993 STY2994 STY2995 STY2996 STY2999 prgK prgJ prgI prgH 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 2867010 2867765 2868089 2868356 2869850 2871866 2867768 2868070 2868331 2869534 2870779 2873527 iagA putative oxidoreductase putative transmembrane transport protein putative transcriptional regulator conserved hypothetical protein conserved hypothetical protein hypothetical protein large repetitive protein putative type I secretion protein putative type I secretion protein, ATP-binding protein putative type I secretion protein putative reverse transcriptase hypothetical protein putative bacteriophage late gene regulator putative bacteriophage late gene regulator putative bacteriophage tail protein putative bacteriophage tail protein putative bacteriophage protein putative phage tail protein probable major tail tube protein putative bacteriophage major tail sheath protein putative DNA-invertase putative glycosyltransferase putative ABC transporter protein putative ferric enterochelin esterase putative exported protein TonB-dependent outer membrane siderophore receptor protein hypothetical protein conserved hypothetical protein virulence protein putative transcriptional regulator putative cation transporter (pseudogene) putative two-component system sensor kinase transcriptional regulator hypothetical protein putative exported protein putative membrane protein putative membrane protein putative transcriptional regulator (pseudogene) conserved hypothetical protein putative glycoporin putative exported protein Iron transport protein, periplasmic-binding protein Iron transport protein, ATP-binding component Iron transport protein, inner membrane component Iron transport protein, inner membrane component hypothetical protein possible AraC-family transcriptional regulator possible AraC-family transcriptional regulator hypothetical protein found within S. typhi pathogenicity island 1 oxygen-regulated invasion protein OrgA, cell invasion protein oxygen-regulated invasion protein OrgA, cell invasion protein cell invasion protein cell invasion protein cell invasion protein cell invasion protein AraC-family transcriptional regulator invasion protein regulator STY3000 STY3001 STY3002 STY3003 iagB stpA sicP 5.1.5 5.1.5 5.1.5 5.1.5 2873545 2874081 2875699 2876118 2874027 2875712 2876049 2876378 STY3004 STY3005 STY3006 STY3007 STY3008 STY3009 STY3010 STY3011 STY3012 STY3013 STY3014 STY3015 STY3016 STY3017 sipF sipA sipD sipC sipB spaT spaS spaR spaQ spaP spaO spaN spaM spaI 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 2876422 2876689 2878765 2879857 2881114 2882898 2883533 2884590 2885385 2885671 2886335 2887246 2888256 2888677 2876670 2878746 2879787 2881086 2882895 2883395 2884603 2885381 2885645 2886345 2887246 2888256 2888699 2889972 STY3018 STY3019 STY3020 STY3021 STY3022 STY3023 STY3025 STY3026 STY3027 STY3029 STY3031 STY3032 STY3034 STY3036 STY3037 STY3038 STY3039 STY3046 STY3047 STY3048 STY3066 STY3069 STY3073 STY3078 STY3084 STY3086 STY3087 STY3088 STY3089 STY3090 STY3091 STY3092 STY3093 STY3097 STY3126 STY3140 STY3154 STY3156 STY3165 STY3166 STY3172 spak invA invE invG invF invH 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.4 5.1.5 5.1.5 5.1.4 0.0.0 0.0.0 0.0.0 1.5.00 6.1.1 1.5.19 0.0.2 7.0.0 0.0.2 0.0.2 0.0.1 0.0.0 5.1.5 0.0.2 4.1.5 4.1.3 4.1.5 4.1.5 4.1.5 4.1.5 4.1.0 0.0.0 0.0.0 0.0.2 4.1.1 5.1.4 5.1.4 6.1.1 6.1.1 0.0.2 0.0.0 2889969 2890400 2892482 2893597 2895282 2896388 2897226 2897705 2897992 2898592 2900066 2900260 2903367 2903746 2905042 2906016 2907509 2912765 2913358 2914796 2927865 2930385 2935978 2942231 2948970 2949638 2952350 2953143 2953664 2954131 2954726 2956439 2957978 2964858 2993415 3013615 3026477 3028619 3037910 3038850 3042198 2890376 2892457 2893600 2895285 2895932 2896831 2897440 2897995 2898519 2899034 2900251 2900586 2903663 2904954 2905974 2907512 2908459 2913358 2914785 2915032 2928569 2930987 2936931 2943025 2949557 2952337 2953123 2953649 2954134 2954667 2955844 2957269 2958334 2966000 2994329 3014073 3026935 3029641 3038773 3039332 3042956 sopD steA steB steC steD steE steF tnpA tnpA invasion protein IagB tyrosine phosphatase (associated with virulence) chaperone (associated with virulence) doubtful CDS found within S. typhi pathogenicity island probable acyl carrier protein function unknown (associated with virulence) cell invasion protein cell invasion protein cell invasion protein unknown function secretory protein (associated with virulence) secretory protein (associated with virulence) secretory protein (associated with virulence) secretory protein (associated with virulence) secretory protein (associated with virulence) secretory protein (associated with virulence) secretory protein (associated with virulence) secretory apparatus ATP synthase (associated with virulence) secretory protein (associated with virulence) possible secretory protein (associated with virulence) cell invasion protein secretory protein (associated with virulence) possible AraC-family regulatory protein cell adherance/invasion protein insertion sequence transposase (pseudogene) hypothetical protein hypothetical protein transposase (pseudogene) hypothetical protein hypothetical protein hypothetical protein possible membrane transport protein possible LysR-family transcriptional regulator possible permease conserved hypothetical protein possible decarboxylase conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein hypothetical protein possible secreted protein undefined product fimbrial subunit (pseudogene) outer membrane usher protein periplasmic fimbrial chaperone fimbrial subunit fimbrial subunit fimbrial subunit possible secreted protein hypothetical protein hypothetical protein conserved hypothetical protein putative membrane protein transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 possible regulatory protein possible regulatory protein conserved hypothetical protein hypothetical protein STY3173 STY3174 STY3175 STY3176 STY3177 STY3178 STY3179 STY3182 STY3183 STY3184 STY3186 STY3188 STY3189 STY3191 STY3192 STY3193 STY3208 STY3224 STY3229 STY3230 STY3231 STY3232 stdC stdB stdA, ybgD tnpA STY3233 STY3234 STY3251 STY3261 STY3273 STY3274 STY3277 STY3278 STY3279 STY3280 STY3281 STY3282 STY3283 STY3285 STY3287 STY3288 STY3289 STY3290 STY3291 STY3292 STY3293 STY3294 STY3295 STY3296 STY3297 STY3298 STY3300 STY3302 STY3303 STY3309 STY3312 STY3313 STY3325 STY3328 STY3329 tnpA kdgR tnpA ordL 0.0.0 0.0.0 4.1.5 4.1.5 4.1.5 3042943 3043600 3044673 3045457 3048066 3043455 3044676 3045416 3047946 3048647 hypothetical protein hypothetical protein probable fimbrial chaperone protein probable outer membrane fimbrial usher protein probable fimbrial protein 0.0.1 5.1.5 5.1.5 5.1.5 2.1.1 0.0.2 0.0.0 0.0.0 0.0.0 0.0.0 5.1.2 0.0.0 5.1.4 0.0.2 4.1.1 4.1.1 1.5.01 3049366 3050045 3051388 3051786 3052190 3052722 3054094 3055153 3056352 3057550 3058163 3073310 3092099 3096533 3096984 3097596 3098252 3049965 3050581 3051786 3052013 3052441 3053522 3055077 3055644 3057005 3058080 3059809 3074149 3092557 3096958 3097562 3098270 3098935 1.5.01 3098929 3099585 5.1.4 6.1.1 5.1.4 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.1 5.1.5 5.1.1 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 6.1.1 0.0.0 1.5.00 0.0.0 7.0.0 3.4.2 0.0.2 0.0.2 7.0.0 0.0.0 0.0.0 1.5.00 3099690 3114814 3122530 3132766 3133460 3133828 3134156 3134334 3134844 3135014 3135344 3135523 3136204 3136966 3137348 3137880 3138642 3138956 3139187 3139940 3140728 3141263 3142971 3143359 3144822 3146822 3148033 3148995 3156513 3161255 3161965 3100148 3115500 3122988 3133423 3133600 3133947 3134344 3134630 3135017 3135280 3135505 3135801 3136707 3137151 3137878 3138506 3138812 3139162 3139414 3140623 3141252 3142762 3143237 3144660 3146306 3147307 3148956 3149714 3157568 3161968 3163017 1.1.1 0.0.0 0.0.0 3170215 3173337 3173764 3171858 3173747 3174138 conserved hypothetical protein outer membrane protein (associated with virulence) hypothetical protein (assiciated with virulence) hypothetical protein (assiciated with virulence) endonuclease fragment conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein possible integrase hypothetical protein transposase for insertion sequence element IS200 conserved hypothetical protein putative membrane protein putative membrane protein possible ABC-transport protein, ATP-binding component possible ABC-transport protein, ATP-binding component transposase for insertion sequence element IS200 probable global regulatory protein transposase for insertion sequence element is200 integrase (pseudogene) hypothetical protein (pseudogene) hypothetical protein hypothetical protein hypothetical protein bacteriocin (fragment) bacteriocin immunity protein bacteriocin (fragment) bacteriocin immunity protein putative exported protein hypothetical protein putative exported protein hypothetical protein hypothetical protein possible membrane protein putative membrane protein LysR-family transcriptional regulator hypothetical protein possible amino acid transport protein hypothetical protein putative oxidoreductase possible aldehyde dehydrogenase conserved hypothetical protein conserved hypothetical protein possible hydrolase hypothetical protein hypothetical protein possible ABC-transport protein, periplasmic-binding component methyl-accepting chemotaxis protein (pseudogene) hypothetical protein hypothetical protein STY3340 STY3341 STY3343 STY3344 STY3345 STY3347 STY3370 STY3371 STY3372 STY3394 STY3433 STY3436 STY3437 STY3438 STY3531 STY3532 STY3533 STY3536 STY3537 STY3538 STY3568 STY3579 STY3593 STY3614 STY3615 STY3617 STY3618 STY3619 STY3643 STY3644 STY3645 STY3650 STY3651 STY3658 STY3659 STY3660 STY3661 STY3662 STY3663 STY3664 STY3665 STY3666 STY3667 STY3668 STY3669 STY3670 STY3671 STY3672 STY3673 STY3674 STY3675 STY3676 STY3677 STY3678 STY3679 STY3680 STY3681 STY3682 STY3683 STY3684 assT dsbA dsbB cheM oadB oadA oadG cI cII nucE nucD 1.5.00 0.0.2 4.1.0 4.1.1 0.0.0 4.1.1 3.3.19 2.2.09 2.2.09 1.1.1 3.4.3 3.4.3 1.5.17 3182112 3183611 3186507 3187993 3189433 3191038 3212004 3213820 3214506 3238302 3277638 3280628 3281569 3183566 3184066 3187928 3189417 3190416 3191730 3213800 3214491 3215183 3239870 3278585 3281542 3282996 1.5.17 1.5.00 1.5.00 1.5.00 1.5.00 6.1.1 6.1.1 4.1.0 7.0.0 6.1.1 4.1.0 4.1.1 0.0.1 4.1.1 4.1.1 3.3.17 3.3.17 0.0.0 0.0.2 0.0.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 3282983 3372342 3373656 3375447 3377394 3378873 3379525 3411528 3431563 3445786 3467657 3469681 3470496 3470870 3471598 3501966 3502694 3503465 3507263 3507601 3515470 3516686 3516918 3517613 3517867 3518551 3518798 3519207 3519440 3519664 3520518 3523084 3523340 3523748 3525240 3526151 3526926 3527963 3529872 3530722 3531784 3532467 3532994 3533201 3533436 3533911 3534285 3283789 3373643 3375431 3375689 3378746 3379478 3380154 3413138 3433386 3447132 3469666 3470034 3470858 3471412 3471951 3502697 3503437 3503893 3507604 3507963 3516522 3516838 3517487 3517834 3518376 3518775 3519139 3519440 3519667 3520521 3522932 3523272 3523639 3524554 3526154 3526891 3527963 3529729 3530705 3531780 3532434 3532994 3533197 3533416 3533909 3534288 3534713 possible membrane transport protein conserved hypothetical protein putative exported protein putative membrane protein hypothetical protein putative membrane protein probable arylsulfate sulfotransferase disulfide isomerase disulfide isomerase methyl-accepting chemotaxis protein II possible carbohydrate kinase possible carbohydrate kinase PTS system, sugar phosphotransferase enzyme IIBC component PTS-transport family phosphoryl transfer protein oxaloacetate decarboxylase beta chain oxaloacetate decarboxylase alpha chain oxaloacetate decarboxylase gamma chain possible membrane transport protein possible transcriptional regulator possible GntR-family transcriptional regulator putative exported protein possible transferase putative regulatory protein possible exported protein putative membrane protein conserved hypothetical protein putative membrane protein putative membrane protein putative membrane transport protein probable uridine phosphorylase hypothetical protein conserved hypothetical protein conserved hypothetical protein probable bacteriophage integrase hypothetical protein repressor protein hypothetical protein regulatory protein cII hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein DNA adenine methylase possible endonuclease hypothetical protein possible lipoprotein possible lipoprotein hypothetical protein hypothetical protein probable capsid portal protein terminase, ATPase subunit putative capsid scaffolding protein major capsid protein terminase, endonuclease subunit putative capsid completion protein probable phage tail protein possible secretory protein putative lysozyme putative membrane protein putative regulatory protein STY3685 STY3686 STY3687 STY3688 STY3689 STY3690 STY3691 STY3692 STY3693 STY3694 STY3695 STY3696 STY3697 STY3698 STY3699 STY3700 STY3701 STY3702 STY3703 STY3706 STY3762 STY3763 STY3764 STY3765 STY3766 STY3771 STY3773 STY3790 STY3799 STY3800 STY3801 STY3802 STY3803 STY3804 STY3805 STY3806 STY3814 STY3817 STY3819 STY3820 STY3821 STY3830 STY3832 STY3833 STY3834 STY3837 STY3844 STY3863 STY3864 STY3865 STY3866 STY3867 STY3869 STY3870 STY3915 STY3918 STY3919 STY3920 STY3922 STY3923 pin tnpA cdh stgA stgB stgC stgD 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.4 6.1.1 4.1.2 7.0.0 0.0.0 0.0.0 3.3.19 0.0.0 3.4.3 0.0.0 2.2.07 0.0.0 6.1.1 0.0.0 7.0.0 4.1.1 4.1.1 0.0.0 1.5.0 3534809 3535233 3535748 3536323 3536669 3537570 3538172 3539686 3540251 3540694 3541120 3541829 3543011 3543581 3543898 3544010 3547084 3547566 3548757 3550557 3624532 3625958 3627061 3628564 3630256 3636785 3638730 3655255 3664919 3665275 3665446 3665690 3666475 3667525 3668495 3668828 3677105 3679220 3535240 3535679 3536326 3536682 3537577 3538175 3539686 3540279 3540691 3541062 3541686 3543001 3543526 3543883 3544017 3547087 3547569 3548666 3548975 3550970 3626013 3627064 3628320 3630120 3631380 3638529 3639392 3656019 3665116 3665415 3665592 3666412 3667515 3668484 3668752 3669829 3677500 3680202 1.5.0 1.5.0 0.0.2 7.0.0 7.0.0 4.1.0 0.0.0 4.1.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.0 0.0.1 4.1.1 4.1.5 4.1.5 4.1.5 4.1.5 0.0.2 3680221 3680729 3682192 3690386 3691934 3692583 3693242 3695190 3703089 3720474 3721335 3721752 3722353 3723230 3724468 3725331 3775779 3780596 3781269 3781989 3784535 3785633 3680736 3682036 3682875 3691534 3692500 3693242 3693487 3696221 3703463 3721322 3721619 3722360 3723228 3724471 3725346 3726065 3776477 3781171 3781967 3784523 3785602 3787390 putative phage tail protein putative phage tail protein putative phage baseplate assembly protein phage baseplate assembly protein phage baseplate assembly protein putative phage tail protein probable variable tail fibre protein hypothetical protein conserved hypothetical protein hypothetical protein DNA-invertase probable major tail sheath protein probable major tail tube protein putative phage tail protein hypothetical protein hypothetical protein putative phage tail protein putative regulator of late gene expression putative positive regulator of late gene transcription transposase putative GntR-family regulatory protein alanine racemase putative serine hydroxymethyltransferase hypothetical protein hypothetical protein putative arylsulfate sulfotransferase (pseudogene) hypothetical protein putative ribulose-phosphate 3-epimerase hypothetical protein CDP-diacylglycerol pyrophosphatase (pseudogene) hypothetical protein (pseudogene) putative GntR-family regulatory protein hypothetical protein putative carbohydrate kinase putative membrane protein putative membrane protein hypothetical protein probable transport system periplasmic binding protein (pseudogene) possible membrane transport protein possible integral membrane transport protein conserved hypothetical protein alcohol dehydrogenase putative DNA-binding protein putative exported protein hypothetical protein putative lipoprotein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein (pseudogene) hypothetical protein conserved hypothetical protein putative membrane protein probable fimbrial subunit protein fimbrial chaperone protein fimbrial membrane usher protein (pseudogene) probable fimbrial protein conserved hypothetical protein STY3924 STY3925 STY3944 STY3945 STY3946 STY3948 STY3949 STY3950 STY3980 STY3983 STY3988 STY3989 STY3990 STY3991 STY3997 STY3998 STY3999 STY4000 STY4001 STY4003 STY4004 STY4005 STY4007 STY4009 STY4012 STY4013 STY4014 STY4015 STY4016 STY4017 STY4018 STY4020 STY4022 STY4023 STY4024 STY4025 STY4027 STY4029 STY4030 mgtC mgtB cigR slsA marT fidL misL STY4032 STY4034 STY4035 STY4036 STY4037 STY4039 STY4041 STY4057 STY4058 STY4074 STY4075 STY4081 rmbA STY4082 waaL, rfaL, rfbT STY4097 STY4099 STY4100 STY4105 STY4106 STY4115 waaK, rfak sapB 7.0.0 1.5.37 6.1.1 7.0.0 1.5.00 0.0.0 0.0.0 0.0.0 0.0.0 4.1.1 6.1.1 3.4.3 1.5.0 0.0.0 6.1.1 0.0.0 1.5.37 1.5.37 2.2.08 2.2.08 1.5.37 7.0.0 0.0.2 7.0.0 6.1.1 1.5.37 1.5.37 1.5.37 1.5.37 7.0.0 0.0.2 0.0.1 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 3787485 3788304 3811353 3812376 3813583 3816148 3817167 3818303 3846843 3849242 3853107 3854206 3855157 3856485 3863614 3864375 3864845 3865208 3866559 3868106 3868976 3869336 3869661 3871470 3873448 3876469 3876905 3877536 3878285 3879146 3880242 3881221 3883613 3884528 3887569 3888370 3889835 3890702 3891261 3788255 3789677 3812261 3813569 3814845 3817170 3818306 3819430 3847928 3850075 3853892 3855126 3856473 3857498 3864357 3864755 3865132 3866566 3868043 3868966 3869245 3869659 3870046 3872852 3876247 3876894 3877390 3878285 3879142 3880255 3880985 3882162 3884308 3887254 3888044 3889050 3890691 3891166 3894130 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 7.0.0 6.1.1 0.0.0 0.0.0 2.2.05 3894205 3895555 3896099 3896540 3897656 3898639 3899797 3918003 3918961 3932390 3932797 3938430 3894822 3895689 3896296 3897523 3898490 3899235 3900141 3918887 3919863 3932773 3933465 3939575 2.2.05 3939632 3940846 putative shikimate 5-dehydrogenase probable PTS system permease putative LysR-family transcriptioanl regulator possible racemase putative membrane transport protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein putative membrane protein (pseudogene) putative DeoR-family transcriptional regulator putative carbohydrate kinase probable permease hypothetical protein putative GntR-family transcriptional regulator hypothetical protein putative PTS system IIB component putative PTS system IIC component putative carbohydrate kinase putative sugar-bisphosphate aldolase (pseudogene) putative PTS system phosphocarrier protein putative DNA-binding protein conserved hypothetical protein (pseudogene) putative glycosyl hydrolase putative transcriptional regulator (pseudogene) putative PTS system protein putative PTS system protein putative PTS system protein putative PTS system protein putative transferase conserved hypothetical protein conserved hypothetical protein Magnesium transport ATPase accessory protein Magnesium transport ATPase, P-type 2 putative exported protein (pseudogene) conserved hypothetical protein conserved hypothetical protein (pseudogene) putative exported protein putative virulence-associated autotransporter protein (pseudogene) conserved hypothetical protein putative IS1351 transposase (pseudogene) putative transposase (pseudogene) putative DNA-binding protein conserved hypothetical protein (pseudogene) hypothetical protein hypothetical protein putative beta-lactamase putative regulatory protein hypothetical protein hypothetical protein lipopolysaccharide 1,2-Nacetylglucosaminetransferase O-antigen ligase 1.5.21 7.0.0 6.1.1 1.5.0 4.1.0 7.0.0 3955101 3956485 3957949 3963524 3966919 3977536 3956411 3957681 3959004 3966847 3967602 3978417 probable glucarate transporter (pseudogene) putative racemase putative lacI family transcriptional regulator regulator putative autotransporter putative lipoprotein putative sugar kinase STY4117 STY4118 STY4124 STY4125 STY4128 STY4148 STY4150 STY4151 STY4152 STY4164 STY4165 STY4166 STY4198 STY4199 STY4201 STY4202 STY4203 STY4207 STY4208 STY4216 STY4217 STY4219 STY4220 STY4221 STY4222 STY4234 STY4253 STY4261 STY4262 STY4263 STY4264 STY4318 bigA 0.0.2 6.1.1 5.1.4 5.1.4 0.0.0 7.0.0 0.0.2 7.0.0 4.1.0 6.1.1 0.0.0 1.5.0 5.1.2 4.1.1 6.1.1 7.0.0 3.4.2 4.1.1 4.1.0 0.0.0 4.1.1 7.0.0 6.1.1 7.0.0 4.1.1 1.1.1 4.1.0 7.0.0 4.1.1 0.0.0 7.0.0 4.1.4 3980242 3982461 3988152 3988346 3990801 4010135 4010780 4011055 4011911 4022959 4024116 4025298 4063955 4064592 4068168 4069063 4069850 4072647 4073368 4083203 4083608 4084900 4085586 4085976 4087158 4099515 4117508 4125259 4126290 4127315 4128092 4194856 3982197 3983273 3988427 3988849 3991733 4010602 4011067 4011540 4012450 4023966 4025240 4026622 4064311 4066181 4068887 4069917 4070180 4073138 4074021 4083319 4084845 4085547 4085966 4087142 4088450 4101158 4117786 4126293 4127261 4128076 4129306 4200464 STY4338 STY4408 STY4412 STY4413 STY4414 STY4415 STY4438 STY4448 STY4449 STY4452 STY4453 STY4456 STY4457 STY4458 STY4459 STY4460 STY4465 STY4468 STY4469 STY4470 STY4485 STY4500a STY4503 dmsA 0.0.0 0.0.0 6.1.1 0.0.2 0.0.0 4.1.1 4.1.0 0.0.0 4.1.0 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 7.0.0 6.1.1 4.1.1 4.1.1 4.1.1 0.0.0 3.5.2 4217480 4277151 4279074 4279819 4280699 4281562 4307686 4317425 4317750 4322993 4323622 4325000 4326304 4327598 4337507 4344317 4350256 4354511 4355502 4355905 4372970 4393711 4397074 4217704 4277252 4279832 4280682 4281538 4283040 4308996 4317763 4318205 4323625 4325010 4326307 4327581 4337449 4344277 4346383 4350924 4355398 4355912 4356594 4373878 4393977 4399424 STY4506 dmsB 3.5.2 4399438 4400061 STY4508 STY4509 dmsC 5.1.5 5.1.5 4400057 4400812 4400830 4401498 insB yafP conserved hypothetical protein putative transcriptional regulator insertion element IS1 protein InsA insertion element IS1 protein InsB hypothetical protein putative acetyltransferase conserved hypothetical protein putative acetyltransferase putative exported protein putative lacI-family transcriptional regulator hypothetical protein putative permease (pseudogene) phage-like lysozyme putative membrane protein gntR family regulatory protein putative phosphosugar-binding protein L-asparaginase (pseudogene) putative membrane protein putative lipoprotein hypothetical protein putative membrane protein (pseudogene) putative DNA-binding protein putative regulatory protein putative aminotransferase putative membrane protein methyl-accepting chemotaxis citrate transducer putative exported protein puative phophotriesterase putative membrane protein hypothetical protein putative ribokinase putative surface-exposed virulence protein (pseudogene) hypothetical protein hypothetical protein deoR family regulatory protein conserved hypothetical protein hypothetical protein putative membrane protein putative exported protein hypothetical protein putative lipoprotein putative exported protein putative integral membrane protein putative type-I secretion protein putative type-I secretion protein large repetitive protein large repetitive protein putative type-1 secretion protein putative glutathione S transferase lysR family regulatory protein putative membrane protein putative membrane protein putative membrane-bound beta-hydroxylase hypothetical protein anaerobic dimethyl sulfoxide reductase chain A (pseudogene) anaerobic dimethyl sulfoxide reductase chain B (pseudogene) putative dimethyl sulfoxide reductase subunit C conserved hypothetical protein STY4510 STY4511 STY4512 STY4513 STY4514 STY4515 STY4516 STY4517 STY4518 STY4519 STY4521 STY4522 STY4523 STY4524 STY4525 STY4526 STY4528 STY4529 STY4530 STY4534 STY4535 STY4536 STY4537 STY4539 STY4540 STY4541a STY4541 STY4543 STY4544 STY4545 STY4546 STY4547 STY4548 STY4549 STY4550 STY4551 STY4552 STY4553 STY4554 STY4557 STY4558 STY4559 STY4560 STY4561 STY4562 STY4563 STY4564 STY4565 STY4566 STY4568 STY4569 STY4570 STY4571 STY4572 STY4573 STY4574 STY4575 STY4576 STY4577 STY4578 STY4579 phoN topB ssB pilL pilM pilN' pilN' pilO pilP pilQ pilR pilS pilT pilU pilV 'pilV2 rci pilK 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 0.0.2 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 4401582 4403286 4404478 4404849 4405069 4405353 4406494 4407033 4407323 4408055 4409652 4410683 4412040 4414008 4414441 4415107 4415909 4417838 4418728 4421390 4421920 4422151 4422753 4423868 4425115 4425480 4425981 4427237 4428630 4429110 4430822 4431907 4432552 4433025 4433684 4434993 4435339 4436587 4437266 4438648 4439581 4440435 4441022 4441532 4442121 4444208 4445185 4445457 4445726 4446469 4447122 4448011 4449482 4449922 4450338 4452916 4453457 4453846 4454829 4456256 4456592 4402982 4404191 4404861 4405046 4405356 4406228 4406712 4407326 4407814 4408807 4410686 4412047 4413839 4414313 4415022 4415664 4417252 4418617 4420722 4421839 4422138 4422687 4423703 4425112 4425534 4425905 4427244 4428532 4429100 4430825 4431907 4432542 4433028 4433687 4434991 4435253 4436490 4437054 4438141 4439562 4440321 4440986 4441522 4442101 4444211 4444966 4445457 4445696 4446088 4447122 4448021 4449489 4449925 4450341 4452761 4453302 4453849 4454814 4456259 4456588 4458097 putative exported protein putative membrane protein hypothetical protein hypothetical protein putative GerE family regulatory protein araC family regulatory protein hypothetical protein conserved hypothetical protein Putative acetyltransferase nonspecific acid phosphatase precursor hypothetical protein DNA helicase hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein topoisomerase B hypothetical protein hypothetical protein single strand binding protein conserved hypothetical protein (pseudogene) putative exported protein putative exported protein PilN lipoprotein homolog (pseudogene) pilus assembly protein (pseudogene) putative pilus assembly protein pilus assembly protein nucleotide-binding protein putative membrane protein prepilin putative membrane protein prepilin peptidase prepilin prepilin, alternative C-terminal region shufflon-specific DNA recombinase putative exported protein hypothetical protein putative membrane protein putative exported protein hypothetical protein hypothetical protein putative membrane protein hypothetical protein putative membrane protein hypothetical protein putative membrane protein putative membrane protein possible exported protein hypothetical protein putative exported protein putative lipoprotein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein putative membrane protein putative membrane protein STY4580 STY4582 STY4583 STY4584 STY4585 STY4586 STY4587 STY4588 STY4589 STY4590 STY4591 STY4592 STY4593 STY4594 STY4595 STY4596 STY4597 STY4598 STY4599 STY4600 STY4601 STY4602 STY4603 STY4604 STY4605 STY4606 STY4607 STY4608 STY4609 STY4610 STY4611 STY4612 STY4613 STY4614 STY4615 STY4616 STY4617 STY4618 STY4619 STY4620 STY4621 STY4622 STY4623 STY4624 STY4625 STY4626 STY4627 STY4628 STY4629 STY4630 STY4631 STY4632 STY4633 STY4635 STY4636 STY4637 STY4638 STY4639 STY4640 STY4641 STY4642 samB samA 'pin sopE nucD2 nucE2 cII 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 1.4.4 1.4.4 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 4458133 4458746 4459393 4460652 4461477 4463285 4464722 4465327 4466173 4466754 4467128 4467675 4469696 4470678 4471619 4472078 4472479 4473753 4473973 4474437 4474723 4475820 4476305 4479078 4479212 4479569 4480094 4481369 4481801 4482721 4483135 4484751 4485349 4486244 4486600 4487247 4487686 4488213 4488638 4489020 4489510 4489729 4489932 4490490 4491144 4492225 4493201 4494964 4496059 4496774 4497835 4498909 4499226 4499824 4502229 4503086 4503667 4503894 4504195 4504500 4504708 4458522 4459105 4460640 4461266 4462019 4464205 4465231 4465707 4466757 4467050 4467586 4469624 4470604 4471577 4471978 4472347 4473753 4507730 4474350 4474655 4475823 4476305 4479085 4479197 4479514 4480084 4481266 4481590 4482523 4483128 4484754 4485356 4486257 4486603 4487178 4487693 4488117 4488638 4489015 4489490 4489725 4489932 4490396 4491140 4492208 4493058 4494967 4496010 4496754 4497838 4498899 4499127 4499656 4502238 4503089 4503670 4503894 4504127 4504536 4504700 4505217 putative membrane protein possible exported protein conserved hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein UV protection protein UV protection protein (pseudogene) hypothetical protein putative positive regulator of late gene transcription putative regulator of late gene expression putative phage tail protein hypothetical protein hypothetical protein putative phage tail protein probable major tail tube protein probable major tail sheath protein DNA-invertase (pseudogene) invasion-associated secreted protein. putative phage tail fibre protein probable phage tail fibre protein putative phage tail protein probable phage baseplate assembly protein phage baseplate assembly protein putative phage baseplate assembly protein putative phage tail completion protein putative phage tail protein putative regulatory protein putative membrane protein putative lysozyme possible secretion protein putative phage tail protein putative capsid completion protein putative phage terminase putative major capsid protein putative capsid protein probable terminase subunit probable capsid portal protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein SOS operon tum protein (pseudogene) conserved hypothetical protein DNA adenine methylase putative exonuclease hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein phage regulatory protein STY4643 STY4644 STY4645 STY4647 STY4648 STY4649 STY4650 STY4651 STY4652 STY4653 STY4654 apl cI yjhP vexE vexD vexC vexB 5.1.2 5.1.2 5.1.2 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 4505250 4505609 4506245 4507998 4508347 4508645 4509535 4510583 4512573 4513900 4514621 4505492 4506241 4507270 4508111 4508634 4509535 4510281 4512553 4513877 4514595 4515415 STY4655 STY4656 vexA tviE 5.1.5 5.1.5 4515425 4516537 4516492 4518273 STY4657 STY4658 STY4659 STY4660 STY4661 insB insA tviD tviC tviB 5.1.4 5.1.4 5.1.5 5.1.5 5.1.5 4518289 4518711 4519050 4521569 4522618 4518792 4518986 4521545 4522615 4523895 STY4662 STY4663 STY4664 STY4665 STY4666 STY4667 STY4668 STY4669 STY4670 STY4671 STY4672 STY4673 STY4674 STY4675 STY4676 STY4677 STY4678 STY4679 STY4680 STY4697 STY4711 STY4728a STY4746 STY4751 STY4755 STY4756 STY4765 STY4771 STY4772 STY4779 STY4780 STY4781 STY4782 STY4783 STY4784 STY4785 STY4786 STY4787 STY4797 STY4801 tviA 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 6.1.1 1.5.23 0.0.0 0.0.0 4.1.1 4.1.0 4.1.0 5.1.4 1.5.37 0.0.2 0.0.2 0.0.2 0.0.0 4.1.1 4.1.1 0.0.2 0.0.0 0.0.0 6.1.1 4.1.1 6.1.1 4524140 4525220 4525533 4527028 4528781 4530221 4530511 4531179 4532268 4534634 4536854 4537312 4537567 4537926 4538390 4539197 4539799 4540153 4541654 4557150 4571986 4591934 4605780 4607644 4612132 4613286 4622105 4631069 4632274 4640018 4640367 4640729 4641054 4641842 4642545 4643662 4644777 4645474 4658590 4661211 4524679 4525408 4527044 4528617 4529794 4530514 4530999 4531631 4534553 4536307 4537315 4537533 4537710 4538252 4539172 4539409 4540077 4541343 4542913 4557737 4572705 4592185 4605986 4608570 4613271 4614674 4622563 4632277 4633437 4640356 4640729 4641031 4641830 4642486 4643678 4644780 4645517 4647447 4659036 4661699 cII int int ecnR artJ tnpA phage regulatory protein phage repressor protein cI phage integrase hypothetical protein hypothetical protein Putative methyltransferase conserved hypothetical protein Vi polysaccharide export protein Vi polysaccharide export inner-membrane protein Vi polysaccharide export ATP-binding protein Vi polysaccharide export inner-membrane protein (ABC-2 type transporter) Vi polysaccharide export protein Vi polysaccharide biosynthesis protein TviE, Glycosyl transferases group 1 insertion element IS1 protein InsB insertion element IS1 protein Vi polysaccharide biosynthesis protein Vi polysaccharide biosynthesis protein, epimerase Vi polysaccharide biosynthesis protein, UDPglucose/GDP-mannose dehydrogenase Vi polysaccharide biosynthesis protein hypothetical protein putative DNA helicase hypothetical protein probable phage integrase hypothetical protein conserved hypothetical protein putative membrane protein hypothetical protein putative membrane protein hypothetical protein transcriptional regulatory protein hypothetical protein hypothetical protein hypothetical protein putative membrane protein integrase (fragment) putative membrane protein bacteriophage integrase transcriptional regulatory protein probable arginine-binding periplasmic protein hypothetical protein (pseudogene) hypothetical protein putative membrane protein putative exported protein putative exported protein transposase for insertion sequence element is200 putative sugar transporter hypothetical protein hypothetical protein hypothetical protein hypothetical protein putative membrane protein putative membrane protein hypothetical protein hypothetical protein hypothetical protein putative BglB-family transcriptional antiterminator putative membrane protein putative transcriptional regulator STY4802 STY4804 STY4805 STY4809 STY4810 STY4811 STY4821 STY4822 STY4823 STY4824 STY4825 STY4826 STY4827 STY4828 STY4829 STY4830 STY4831 STY4832 STY4833 STY4834 STY4835 STY4836a STY4837 STY4838 STY4839 STY4841 STY4842 STY4843 STY4845 STY4846 STY4848 STY4849 STY4850 STY4851 STY4852 STY4853 STY4854 STY4858 STY4859 STY4860 STY4861 STY4863 STY4864 STY4865 STY4866 STY4871 STY4876 STY4878 STY4879 STY4886 STY4887 STY4902 STY4904 STY4938 STY4940 STY4941 STY4943 STY4944 STY4945 STY4946 miaE cI sefA sefB sefC sefD, sefD sefR trpS2 sthE sthD sthC sthB sthA 4.1.1 3.4.2 3.4.2 2.2.01 0.0.0 4.1.0 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.5 5.1.5 5.1.4 4661886 4664461 4665404 4669470 4670244 4670479 4683853 4685181 4686254 4687302 4688741 4689323 4689566 4690849 4691273 4691653 4691877 4692212 4694767 4694997 4695457 4663289 4665393 4666624 4670231 4670399 4670967 4685118 4686257 4687327 4688465 4689307 4689562 4690426 4691172 4691656 4691880 4692197 4694545 4694907 4695146 4696511 4.1.5 5.1.5 5.1.5 4.1.5 6.1.1 5.1.5 5.1.5 2.2.09 5.1.5 5.1.4 5.1.5 5.1.5 5.1.5 0.0.0 0.0.0 0.0.0 0.0.2 0.0.2 4.1.0 0.0.2 2.2.1 0.0.0 0.0.2 3.3.20 4.1.1 7.0.0 0.0.0 4.1.1 0.0.2 0.0.0 0.0.2 4.1.1 4.1.5 4.1.3 4.1.5 4.1.5 4.1.3 6.1.1 4.1.0 4696958 4697576 4698333 4700846 4701328 4702716 4702910 4703505 4704346 4705454 4706399 4710186 4712736 4716299 4716616 4717653 4721482 4722451 4723573 4724051 4725840 4727150 4727571 4728340 4732706 4738848 4740315 4740664 4750002 4750276 4764093 4765611 4799424 4800549 4801127 4803706 4804460 4805344 4806214 4697451 4698328 4700849 4701288 4702139 4702925 4703260 4704156 4705191 4706288 4710148 4712723 4716035 4716538 4717491 4717928 4722090 4723362 4724034 4724716 4726853 4727302 4728101 4729074 4733080 4740219 4740458 4741365 4750289 4750578 4764551 4766675 4800508 4801106 4803660 4804389 4805005 4806015 4806708 putative membrane protein carbamate kinase arginine deiminase tRNA hydroxylase hypothetical protein putative exported protein integrase protein kinase protein kinase hypothetical protein phage polarity suppression protein bacteriophage gene regulatory protein putative phage capsid protein phage DNA binding protein phage immunity repressor protein hypothetical protein hypothetical P4 phage protein Bacteriophage P4 DNA primase hypothetical protein hypothetical secreted protein putative transposase for insertion sequence (pseudogene) fimbrial protein precursor (pseudogene) fimbrial chaperone protein outer membrane fimbrial usher protein putative fimbrial protein (pseudogene) putative activator protein SefR (pseudogene) probable regulatory protein putative gerE-family regulatory protein thiol:disulfide interchange protein (pseudogene) putative outer membrane protein putative transposase (pseudogene) helicase related protein DEAD-box helicase-related protein conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein putative exported protein hypothetical protein probable tryptophanyl-tRNA synthetase hypothetical protein conserved hypothetical protein probable aspartate racemase putative membrane protein putative aldehyde dehydrogenase (pseudogene) hypothetical protein putative membrane protein hypothetical protein hypothetical protein conserved hypothetical protein putative membrane protein putative fibrial protein (pseudogene) putative fimbrial subunit outer membrane usher protein (pseudogene) putative fimbrial chaperone protein putative fimbrial protein putative transcriptional regulator protein putative secreted protein 4. Genes unique to S. typhi w.r.t. S. typhimurium Gene Functional clasification 4.1.5 Start End Function 212695 213261 putative fimbrial protein 4.1.5 4.1.5 213248 215914 215839 216648 outer membrane usher protein HtrE precursor chaperone protein EcpD precursor 4.1.5 216827 217411 putative fimbrial protein STY0256 Gene name staD, yadM staC, htrE staB, ecpD staA, yadN tnpA 5.1.4 271076 271534 STY0267 tnpA 5.1.4 280088 280546 tnpA 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 4.1.0 5.1.4 5.1.4 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.4 0.0.2 5.1.4 311664 311765 314246 314619 319800 325202 325657 326234 326689 335381 336466 339076 339338 342296 349946 350172 351764 352525 353209 355919 357131 357726 446265 484300 507385 311762 312055 314647 315044 320294 325672 326130 326704 327150 336058 338997 339336 339781 342794 350113 350549 352474 353100 355896 356998 357586 358343 446723 485454 507843 STY0657 tnpA 5.1.4 657246 657704 STY0874 STY0945 STY0946 STY0947 STY1014 STY1015 STY1016 STY1017 STY1018 STY1019 STY1020 STY1021 STY1022 STY1023 STY1024 STY1025 STY1026 STY1027 tnpA 5.1.4 0.0.0 5.1.2 0.0.0 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 864041 936885 937244 937728 1010618 1011496 1012638 1013315 1014106 1014493 1014982 1015718 1016177 1017163 1017923 1018267 1018791 1019268 864499 937082 937621 937934 1011499 1012560 1013318 1014100 1014402 1014693 1015386 1016092 1017160 1017912 1018270 1018791 1019264 1019840 transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein probable secreted protein hypothetical protein probable secreted protein hypothetical protein Rhs-family protein conserved hypothetical protein hypothetical protein probable lipoprotein (pseudogene) probable transposase remnant (pseudogene) probable transposase remnant (pseudogene) putative fimbrial protein putative fimbrial subunit outer membrane fimbrial user protein putative fimbrail protein transcriptional regulator hypothetical protein transposase for insertion sequence element is200 conserved hypothetical protein transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element is200 hypothetical protein probable integrase remnant hypothetical protein putative DNA methylase putative bacteriophage protein exonuclease bacteriophage recombination protein host-nuclease inhibitor protein prophage Kil protein putative DNA-binding protein putative DNA-binding protein conserved hypothetical bacteriophage protein putative DNA replication protein putative DNA-binding protein conserved hypothetical bacteriophage protein putative methyltransferase hypothetical bacteriophage protein STY0204 STY0205 STY0206 STY0207 STY0295 STY0296 STY0300 STY0301 STY0307 STY0311 STY0312 STY0313 STY0314 STY0322 STY0324 STY0326 STY0327 STY0333 STY0343 STY0344 STY0345 STY0346 STY0347 STY0348 STY0349 STY0350 STY0437 STY0480 STY0500 safE tcfA, tsaA tcfB, tsaB tsaC tcfD, tsaD tinR tnpA exo, redX betA, redB gam STY1028 STY1029 STY1030 STY1031 STY1032 STY1033 STY1034 STY1035 STY1036 STY1038 STY1039 STY1040 STY1041 STY1042 STY1043 STY1044 STY1045 STY1046 STY1047 STY1048 STY1049 STY1050 STY1051 STY1052 STY1053 STY1054 STY1055 STY1056 STY1057 STY1058 STY1059 STY1060 STY1061 STY1062 STY1063 STY1064 STY1065 STY1066 STY1067 STY1068 STY1069 STY1070 STY1071 STY1072 STY1073 STY1075 STY1076 STY1108 tnpA 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 0.0.1 5.1.4 1019934 1020282 1020578 1020876 1021558 1021787 1022132 1022943 1023687 1024883 1025144 1025810 1026186 1026467 1027078 1027660 1028101 1028451 1029169 1030572 1031929 1032678 1033902 1034420 1035345 1035886 1036140 1036681 1037045 1037612 1038768 1039212 1039842 1041830 1042417 1042722 1043789 1044292 1045023 1045516 1046268 1046621 1047817 1048497 1050023 1051126 1051463 1082125 1020200 1020443 1020865 1021373 1021797 1022092 1022734 1023554 1024484 1025008 1025593 1026199 1026467 1027081 1027617 1028037 1028361 1029203 1030572 1032038 1032663 1033898 1034408 1035361 1035770 1036143 1036694 1037070 1037608 1038757 1039208 1039664 1041830 1042417 1042719 1043789 1044142 1045023 1045451 1046268 1046621 1047820 1048497 1050008 1050541 1051266 1052164 1082583 STY1114 STY1225 tnpA tnpA 5.1.4 5.1.4 1085337 1178594 1085795 1179052 STY1293 STY1358 STY1359 STY1360 STY1361 STY1362 0.0.0 5.1.2 0.0.0 0.0.0 5.1.2 5.1.5 1252901 1319577 1319944 1320252 1321082 1321705 1253230 1319921 1320117 1320752 1321351 1322180 STY1364 STY1365 4.1.0 5.1.2 1322110 1322594 1322535 1322767 putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative damage-inducible protein putative bacteriophage protein putative bacteriophage protein hypothetical prophage protein putative prophage antitermination protein putative bacteriophage protein putative lipoprotein putative prophage membrane protein putative prophage membrane protein putative bacteriophage protein putative secreted protein hypothetical prophage protein putative bacteriophage protein putative prophage terminase small subunit putative prophage terminase large subunit putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein hypothetical prophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative secreted protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein hypothetical prophage protein hypothetical prophage protein putative DNA invertase (fragment) conserved hypothetical protein transposase for insertion sequence element IS200 transposase for insertion sequence element is200 transposase for insertion sequence element IS200 hypothetical protein integrase (fragment) hypothetical protein hypothetical protein hypothetical protein pertussis toxin subunit S1 related protein (pseudogene) hypothetical periplasmic protein bacteriophage gene remnant (pseudogene) STY1366 STY1367 STY1379 tnpA 5.1.2 0.0.0 5.1.4 1322944 1323331 1333722 1323225 1323468 1334180 STY1413 STY1418 tnpA 0.0.0 5.1.4 1363893 1367421 1365452 1367879 1.4.1 0.0.0 5.1.4 1455055 1456097 1529647 1455972 1456801 1530105 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1538899 1539260 1539702 1539907 1540134 1540814 1541022 1541402 1541714 1541983 1542275 1542833 1543105 1539288 1539712 1539917 1540137 1540817 1541029 1541405 1541704 1541986 1542177 1542805 1543102 1544075 STY1604 STY1605 STY1606 STY1607 STY1608 STY1609 STY1610 STY1611 STY1612 STY1613 STY1614 STY1615 STY1616 STY1617 STY1618 STY1619 STY1620 STY1621 STY1622 STY1623 STY1624 STY1625 STY1626 STY1627 STY1628 STY1629 STY1630 STY1631 STY1632 STY1633 STY1634 STY1635 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1544282 1546055 1546229 1546722 1547496 1547849 1548347 1548561 1549208 1549534 1549845 1550387 1551982 1553459 1554283 1554956 1556086 1557049 1557389 1557835 1558296 1558540 1559967 1560491 1560870 1561381 1563846 1564727 1564930 1566081 1566665 1567003 1546051 1546219 1546660 1547252 1547846 1548268 1548577 1549211 1549534 1549845 1550390 1551982 1553478 1554280 1554741 1556071 1557039 1557387 1557835 1558299 1558550 1559967 1560488 1560772 1561205 1563846 1564730 1564942 1566084 1566608 1567012 1568106 STY1636 STY1637 STY1638 5.1.2 5.1.2 5.1.2 1568099 1568680 1569707 1568677 1569705 1570219 STY1498 STY1499 STY1580 STY1591 STY1592 STY1593 STY1594 STY1595 STY1596 STY1597 STY1598 STY1599 STY1600 STY1601 STY1602 STY1603 hlyE tnpA gam eha DNA-invertase (fragment) hypothetical protein transposase for insertion sequence element IS200 hypothetical protein transposase for insertion sequence element IS200 haemolysin HlyE hypothetical protein transposase for insertion sequence element IS200 putative bacteriophage transcriptional regulator conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein bacteriophage host-nuclease inhibitor protein hypothetical protein putative bacteriophage GSP secretion protein Eha (pseudogene) hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein putative lipoprotein putative membrane protein hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein putative bacteriophage protein hypothetical protein hypothetical protein putative membrane protein conserved bacteriophage hypothetical protein hypothetical protein hypothetical protein bacteriophage tail sheath protein tail core protein hypothetical protein hypothetical protein putative bacteriophage protein hypothetical protein putative bacteriophage tail fibre protein putative bacteriophage regulatory protein putative bacteriophage baseplate protein putative bacteriophage baseplate protein putative bacteriophage baseplate assembly protein putative bacteriophage tail fiber protein bacteriophage tail fiber protein alternative bacteriophage tail fiber C-terminus STY1639 STY1640 STY1641 STY1642 STY1643 STY1794 tnpA 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.4 1570219 1570843 1571330 1571802 1572347 1715544 1570836 1571328 1571800 1572284 1572919 1716002 STY1844 tnpA 5.1.4 1759921 1760379 5.1.2 5.1.5 0.0.0 0.0.2 5.1.5 5.1.5 5.1.4 1784727 1785388 1786270 1786795 1787529 1788274 1791357 1784933 1786197 1786647 1787337 1788257 1788687 1791815 7.0.0 0.0.2 0.0.0 6.1.1 5.1.2 1883242 1885617 1886884 1887201 1931753 1885221 1886747 1887057 1887428 1931947 STY2008 5.1.2 1887450 1887551 STY2009 5.1.2 1887552 1887913 STY2011 STY2012 STY2013 STY2014 STY2015 STY2016 STY2017 STY2018 STY2019 STY2020 STY2021 STY2022 STY2023 STY2024 STY2025 STY2026 STY2027 STY2028 STY2029 STY2030 STY2031 STY2032 STY2033 STY2034 STY2035 STY2036 STY2037 STY2038 STY2039 STY2040 STY2041 STY2042 STY2043 STY2044 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 1887993 1888674 1889471 1890004 1891515 1892192 1893392 1893761 1893986 1894800 1895228 1896154 1896486 1897520 1897826 1898476 1900606 1901062 1901514 1902663 1903201 1903577 1904128 1904501 1904911 1905864 1906366 1907613 1908238 1909704 1911073 1911880 1912209 1912585 1888193 1888886 1889989 1891515 1892195 1893391 1893745 1893898 1894741 1895228 1895959 1896489 1897517 1897822 1898476 1900428 1901058 1901502 1902659 1903211 1903590 1904131 1904535 1904869 1905852 1906361 1907598 1908143 1909704 1911107 1911822 1912092 1912601 1913061 STY1884 STY1886 STY1887 STY1889 STY1890 STY1891 STY1895 STY2004 STY2005 STY2006 STY2007 STY20074a cdtB tnpA yjcS lar putative bacteriophage tail fiber assembly protein alternative bacteriophage tail fiber C-terminus alternative bacteriophage tail fiber C-terminus alternative bacteriophage tail fiber C-terminus DNA-invertase transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 putative integrase (pseudogene) putative toxin-like protein hypothetical protein conserved hypothetical protein putative pertussis-like toxin subunit putative pertussis-like toxin subunit transposase for insertion sequence element IS200 putative hydrolase conserved hypothetical protein hypothetical protein putative DNA-binding protein restriction alleviation and modification enhancement protein putative bacteriophage replication protein (pseudogene) probable bacteriophage replication protein (pseudogene) putative integrase (pseudogene) DNA-invertase (pseudogene) putative bacteriophage tail protein putative bacteriophage tail protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative exported protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein putative bacteriophage protein conserved hypothetical protein conserved hypothetical protein conserved hypothetical protein putative bacteriophage protein putative bacteriophage protein hypothetical protein putative bacteriophage protein putative endolysin STY2045 STY2046 STY2047 STY2048 STY2049 STY2050 STY2051 STY2052 STY2053 STY2054 STY2054A STY2055 STY2056 STY2057 STY2058 STY2059 STY2060 STY2061 STY2062 STY2063 STY2064 STY2065 STY2066 STY2067 STY2068 STY2069 STY2070 STY2071 STY2072 STY2073 STY2074 STY2075 STY2076 STY2104 STY2298 STY2299 STY2349 STY2350 STY2351 STY2352 STY2353 STY2355 STY2356 STY2357 STY2358 STY2359 STY2359a STY2360 STY2361 STY2362 STY2363 STY2364 STY2419 STY2420 STY2466a STY2497 STY2626 STY2627a STY2627b STY2629 hokW mokW kil, ydaD racC recE rfbE rfbS insB insA tnpA gtrA2 gtrB2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.4 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 4.1.1 4.1.4 4.1.4 4.1.0 4.1.0 4.1.0 0.0.0 4.1.0 4.1.0 0.0.0 0.0.0 0.0.2 0.0.0 7.0.0 0.0.1 4.1.0 0.0.0 0.0.0 4.1.0 5.1.4 5.1.4 2.2.03 5.1.4 1913065 1913483 1913754 1914557 1915298 1915387 1915938 1916228 1916899 1917389 1917389 1917646 1917993 1919308 1920237 1920890 1921304 1921742 1922526 1923279 1924145 1924564 1924903 1925628 1925785 1925965 1926656 1926877 1927122 1927497 1930637 1931940 1932235 1956684 2127027 2128040 2187521 2188394 2189209 2189768 2190285 2190874 2191545 2191793 2192559 2193190 2193505 2193988 2194299 2194958 2195153 2195375 2249467 2249889 2297530 2330729 1913406 1913785 1914323 1915114 1915393 1915941 1916228 1916827 1917150 1917544 1917601 1917789 1919201 1920240 1920791 1921297 1921726 1922554 1923272 1924067 1924567 1924806 1925322 1925783 1925988 1926261 1926877 1927047 1927397 1930625 1931689 1932128 1932516 1957358 2128043 2128879 2188240 2189107 2189652 2190217 2190764 2191476 2191823 2192488 2193059 2193492 2193863 2194134 2194718 2195056 2195350 2195992 2249970 2250164 2297730 2331187 5.1.4 4.1.4 4.1.4 4.1.4 2461018 2461960 2462318 2462589 2461233 2462349 2462536 2464511 putative bacteriophage protein hypothetical protein putative membrane protein putative bacteriophage protein hypothetical protein hypothetical protein putative bacteriophage protein hypothetical protein putative bacteriophage cohesive ends undefined product host cell-killing modulation protein hypothetical protein putative transposase hypothetical protein putative membrane protein putative bacteriophage protein hypothetical protein conserved hypothetical protein putative DNA replication protein conserved hypothetical protein conserved hypothetical protein putative cro repressor putative regulator conserved hypothetical protein conserved hypothetical protein hypothetical protein putative cell division inhibitor protein putative bacteriophage protein putative bacteriophage protein exodeoxyribonuclease VIII conserved hypothetical protein conserved hypothetical protein putative excisionase putative membrane protein CDP-tyvelose-2-epimerase paratose synthase putative exported protein putative exported protein putative exported protein hypothetical protein putative exported protein putative exported protein hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein RhsF core protein (pseudogene) conserved hypothetical protein (partial CDS) putative exported protein hypothetical protein hypothetical protein putative exported protein insertion element IS1 protein InsB insertion element IS1 protein InsA UmuC-family protein (pseudogene) transposase for insertion sequence element IS200 putative transposase (pseudogene) bactoprenol-linked glucose transferase bactoprenol glucosyl transferase (pseudogene) putative lipopolysaccharide modification STY2631 STY2631a STY2640 5.1.4 5.1.2 5.1.4 2464628 2465525 2475976 2465128 2465770 2476434 tnpA 1.5.0 0.0.2 4.1.0 4.1.0 0.0.2 5.1.2 5.1.2 5.1.5 4.1.5 4.1.3 4.1.5 4.1.5 4.1.5 4.1.5 4.1.0 0.0.0 5.1.4 2567612 2568948 2585359 2585891 2586659 2759733 2760475 2862665 2948970 2949638 2952350 2953143 2953664 2954131 2954726 2956439 3013615 2568880 2570135 2585875 2586430 2587348 2760506 2760663 2862874 2949557 2952337 2953123 2953649 2954134 2954667 2955844 2957269 3014073 STY3188 STY3189 STY3191 STY3192 STY3193 STY3224 tnpA 0.0.0 0.0.0 0.0.0 0.0.0 5.1.2 5.1.4 3054094 3055153 3056352 3057550 3058163 3092099 3055077 3055644 3057005 3058080 3059809 3092557 STY3234 tnpA 5.1.4 3099690 3100148 STY3261 STY3273 STY3274 STY3277 STY3278 STY3279 STY3280 STY3281 STY3282 STY3283 STY3285 STY3287 STY3288 STY3289 STY3290 STY3291 STY3292 STY3343 STY3344 STY3345 STY3347 STY3614 STY3632 STY3644 STY3645 STY3658 STY3659 STY3660 STY3661 tnpA 5.1.4 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.1 5.1.5 5.1.1 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 4.1.0 4.1.1 0.0.0 4.1.1 4.1.0 2.2.05 3.3.17 0.0.0 5.1.2 5.1.2 5.1.2 5.1.2 3122530 3132766 3133460 3133828 3134156 3134334 3134844 3135014 3135344 3135523 3136204 3136966 3137348 3137880 3138642 3138956 3139187 3186507 3187993 3189433 3191038 3467657 3487969 3502694 3503465 3515470 3516686 3516918 3517613 3122988 3133423 3133600 3133947 3134344 3134630 3135017 3135280 3135505 3135801 3136707 3137151 3137878 3138506 3138812 3139162 3139414 3187928 3189417 3190416 3191730 3469666 3488850 3503437 3503893 3516522 3516838 3517487 3517834 STY2731 STY2732 STY2747 STY2748 STY2749 STY2879 STY2880 STY2986a STY3084 STY3086 STY3087 STY3088 STY3089 STY3090 STY3091 STY3092 STY3140 tnpA steA steB steC steD steE steF rffH cI acyltransferase putative transposase (pseudogene) putative bacteriophage tail protein (pseudogene) transposase for insertion sequence element IS200 putative permease conserved hypothetical protein (pseudogene) putative lipoprotein (pseudogene) putative exported protein conserved hypothetical protein putative reverse transcriptase hypothetical protein hypothetical protein fimbrial subunit (pseudogene) outer membrane usher protein periplasmic fimbrial chaperone fimbrial subunit fimbrial subunit fimbrial subunit possible secreted protein hypothetical protein transposase for insertion sequence element IS200 hypothetical protein hypothetical protein hypothetical protein hypothetical protein possible integrase transposase for insertion sequence element IS200 transposase for insertion sequence element IS200 transposase for insertion sequence element is200 integrase (pseudogene) hypothetical protein (pseudogene) hypothetical protein hypothetical protein hypothetical protein bacteriocin (fragment) bacteriocin immunity protein bacteriocin (fragment) bacteriocin immunity protein putative exported protein hypothetical protein putative exported protein hypothetical protein hypothetical protein possible membrane protein putative membrane protein putative exported protein putative membrane protein hypothetical protein putative membrane protein possible exported protein glucose-1-phosphate thymidylyltransferase probable uridine phosphorylase hypothetical protein probable bacteriophage integrase hypothetical protein repressor protein hypothetical protein STY3662 STY3663 STY3664 STY3665 STY3666 STY3667 STY3668 STY3669 STY3670 STY3671 STY3672 STY3673 STY3674 STY3675 STY3676 STY3677 STY3678 STY3679 STY3680 STY3681 STY3682 STY3683 STY3684 STY3685 STY3686 STY3687 STY3688 STY3689 STY3690 STY3691 STY3692 STY3693 STY3694 STY3695 STY3696 STY3697 STY3698 STY3699 STY3700 STY3701 STY3702 STY3703 cII STY3706 STY3762 STY3763 STY3764 STY3844 STY3845 STY3918 STY3919 STY3920 STY3922 STY3948 STY3949 STY3950 STY4039 STY4074 STY4075 STY4124 STY4125 tnpA nucE nucD pin yiiF stgA stgB stgC stgD insB 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 3517867 3518551 3518798 3519207 3519440 3519664 3520518 3523084 3523340 3523748 3525240 3526151 3526926 3527963 3529872 3530722 3531784 3532467 3532994 3533201 3533436 3533911 3534285 3534809 3535233 3535748 3536323 3536669 3537570 3538172 3539686 3540251 3540694 3541120 3541829 3543011 3543581 3543898 3544010 3547084 3547566 3548757 3518376 3518775 3519139 3519440 3519667 3520521 3522932 3523272 3523639 3524554 3526154 3526891 3527963 3529729 3530705 3531780 3532434 3532994 3533197 3533416 3533909 3534288 3534713 3535240 3535679 3536326 3536682 3537577 3538175 3539686 3540279 3540691 3541062 3541686 3543001 3543526 3543883 3544017 3547087 3547569 3548666 3548975 5.1.4 6.1.1 4.1.2 7.0.0 0.0.0 7.0.0 4.1.5 4.1.5 4.1.5 4.1.5 0.0.0 0.0.0 0.0.0 5.1.5 0.0.0 0.0.0 5.1.4 5.1.4 3550557 3624532 3625958 3627061 3703089 3703463 3780596 3781269 3781989 3784535 3816148 3817167 3818303 3898639 3932390 3932797 3988152 3988346 3550970 3626013 3627064 3628320 3703463 3703711 3781171 3781967 3784523 3785602 3817170 3818306 3819430 3899235 3932773 3933465 3988427 3988849 regulatory protein cII hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein DNA adenine methylase possible endonuclease hypothetical protein possible lipoprotein possible lipoprotein hypothetical protein hypothetical protein probable capsid portal protein terminase, ATPase subunit putative capsid scaffolding protein major capsid protein terminase, endonuclease subunit putative capsid completion protein probable phage tail protein possible secretory protein putative lysozyme putative membrane protein putative regulatory protein putative phage tail protein putative phage tail protein putative phage baseplate assembly protein phage baseplate assembly protein phage baseplate assembly protein putative phage tail protein probable variable tail fibre protein hypothetical protein conserved hypothetical protein hypothetical protein DNA-invertase probable major tail sheath protein probable major tail tube protein putative phage tail protein hypothetical protein hypothetical protein putative phage tail protein putative regulator of late gene expression putative positive regulator of late gene transcription transposase putative GntR-family regulatory protein alanine racemase putative serine hydroxymethyltransferase hypothetical protein putative CopG-family DNA-binding protein probable fimbrial subunit protein fimbrial chaperone protein fimbrial membrane usher protein (pseudogene) probable fimbrial protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein insertion element IS1 protein InsA insertion element IS1 protein InsB STY4146 STY4207 STY4208 STY4216 STY4217 STY4219 STY4220 STY4221 STY4222 STY4253 STY4412 STY4413 STY4414 STY4415 STY4521 STY4522 STY4523 STY4524 STY4525 STY4526 STY4528 STY4529 STY4530 STY4534 STY4535 STY4536 STY4537 STY4539 STY4540 STY4541 STY4541a STY4543 STY4544 STY4545 STY4546 STY4547 STY4548 STY4549 STY4550 STY4551 STY4552 STY4553 STY4554 STY4557 STY4558 STY4559 STY4560 STY4561 STY4562 STY4563 STY4564 STY4565 STY4566 STY4568 STY4569 STY4570 STY4571 STY4572 STY4573 STY4574 STY4575 topB ssB pilL pilM pilN' pilN' pilO pilP pilQ pilR pilS pilT pilU pilV 'pilV2 rci pilK 5.1.4 4.1.1 4.1.0 0.0.0 4.1.1 7.0.0 6.1.1 7.0.0 4.1.1 4.1.0 6.1.1 0.0.2 0.0.0 4.1.1 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 0.0.2 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 4009535 4072647 4073368 4083203 4083608 4084900 4085586 4085976 4087158 4117508 4279074 4279819 4280699 4281562 4409652 4410683 4412040 4414008 4414441 4415107 4415909 4417838 4418728 4421390 4421920 4422151 4422753 4423868 4425115 4425981 4425480 4427237 4428630 4429110 4430822 4431907 4432552 4433025 4433684 4434993 4435339 4436587 4437266 4438648 4439581 4440435 4441022 4441532 4442121 4444208 4445185 4445457 4445726 4446469 4447122 4448011 4449482 4449922 4450338 4452916 4453457 4009990 4073138 4074021 4083319 4084845 4085547 4085966 4087142 4088450 4117786 4279832 4280682 4281538 4283040 4410686 4412047 4413839 4414313 4415022 4415664 4417252 4418617 4420722 4421839 4422138 4422687 4423703 4425112 4425534 4427244 4425905 4428532 4429100 4430825 4431907 4432542 4433028 4433687 4434991 4435253 4436490 4437054 4438141 4439562 4440321 4440986 4441522 4442101 4444211 4444966 4445457 4445696 4446088 4447122 4448021 4449489 4449925 4450341 4452761 4453302 4453849 putative transposase (pseudogene) putative membrane protein putative lipoprotein hypothetical protein putative membrane protein (pseudogene) putative DNA-binding protein putative regulatory protein putative aminotransferase putative membrane protein putative exported protein deoR family regulatory protein conserved hypothetical protein hypothetical protein putative membrane protein hypothetical protein DNA helicase hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein topoisomerase B hypothetical protein hypothetical protein single strand binding protein conserved hypothetical protein (pseudogene) putative exported protein putative exported protein pilus assembly protein (pseudogene) PilN lipoprotein homolog (pseudogene) putative pilus assembly protein pilus assembly protein nucleotide-binding protein putative membrane protein prepilin putative membrane protein prepilin peptidase prepilin prepilin, alternative C-terminal region shufflon-specific DNA recombinase putative exported protein hypothetical protein putative membrane protein putative exported protein hypothetical protein hypothetical protein putative membrane protein hypothetical protein putative membrane protein hypothetical protein putative membrane protein putative membrane protein possible exported protein hypothetical protein putative exported protein putative lipoprotein hypothetical protein hypothetical protein hypothetical protein hypothetical protein STY4576 STY4577 STY4578 STY4579 STY4580 STY4582 STY4583 STY4584 STY4585 STY4586 STY4587 STY4588 STY4589 STY4590 STY4591 STY4592 STY4593 STY4594 STY4595 STY4596 STY4597 STY4598 STY4599 STY4600 STY4601 STY4602 STY4603 STY4604 STY4605 STY4606 STY4607 STY4608 STY4609 STY4610 STY4611 STY4612 STY4613 STY4614 STY4615 STY4616 STY4617 STY4618 STY4619 STY4620 STY4621 STY4622 STY4623 STY4624 STY4625 STY4626 STY4627 STY4628 STY4629 STY4630 STY4631 STY4632 STY4633 STY4635 STY4636 STY4637 samB samA 'pin sopE nucD2 nucE2 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 1.4.4 1.4.4 5.1.2 5.1.2 4453846 4454829 4456256 4456592 4458133 4458746 4459393 4460652 4461477 4463285 4464722 4465327 4466173 4466754 4467128 4467675 4469696 4470678 4471619 4472078 4472479 4473753 4473973 4474437 4454814 4456259 4456588 4458097 4458522 4459105 4460640 4461266 4462019 4464205 4465231 4465707 4466757 4467050 4467586 4469624 4470604 4471577 4471978 4472347 4473753 4507730 4474350 4474655 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 4474723 4475820 4476305 4479078 4479212 4479569 4480094 4481369 4481801 4482721 4483135 4484751 4485349 4486244 4486600 4487247 4487686 4488213 4488638 4489020 4489510 4489729 4489932 4490490 4491144 4492225 4493201 4494964 4496059 4496774 4497835 4498909 4499226 4499824 4502229 4503086 4475823 4476305 4479085 4479197 4479514 4480084 4481266 4481590 4482523 4483128 4484754 4485356 4486257 4486603 4487178 4487693 4488117 4488638 4489015 4489490 4489725 4489932 4490396 4491140 4492208 4493058 4494967 4496010 4496754 4497838 4498899 4499127 4499656 4502238 4503089 4503670 hypothetical protein hypothetical protein putative membrane protein putative membrane protein putative membrane protein possible exported protein conserved hypothetical protein conserved hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein UV protection protein UV protection protein (pseudogene) hypothetical protein putative positive regulator of late gene transcription putative regulator of late gene expression putative phage tail protein hypothetical protein hypothetical protein putative phage tail protein probable major tail tube protein probable major tail sheath protein DNA-invertase (pseudogene) invasion-associated secreted protein. putative phage tail fibre protein probable phage tail fibre protein putative phage tail protein probable phage baseplate assembly protein phage baseplate assembly protein putative phage baseplate assembly protein putative phage tail completion protein putative phage tail protein putative regulatory protein putative membrane protein putative lysozyme possible secretion protein putative phage tail protein putative capsid completion protein putative phage terminase putative major capsid protein putative capsid protein probable terminase subunit probable capsid portal protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein SOS operon tum protein (pseudogene) conserved hypothetical protein DNA adenine methylase putative exonuclease STY4638 STY4639 STY4640 STY4641 STY4642 STY4643 STY4644 STY4645 STY4647 STY4648 STY4649 STY4650 STY4651 STY4652 STY4653 STY4654 yjhP vexE vexD vexC vexB 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 4503667 4503894 4504195 4504500 4504708 4505250 4505609 4506245 4507998 4508347 4508645 4509535 4510583 4512573 4513900 4514621 4503894 4504127 4504536 4504700 4505217 4505492 4506241 4507270 4508111 4508634 4509535 4510281 4512553 4513877 4514595 4515415 STY4655 STY4656 vexA tviE 5.1.5 5.1.5 4515425 4516537 4516492 4518273 STY4657 STY4658 STY4659 STY4660 STY4661 insB insA tviD tviC tviB 5.1.4 5.1.4 5.1.5 5.1.5 5.1.5 4518289 4518711 4519050 4521569 4522618 4518792 4518986 4521545 4522615 4523895 STY4662 STY4663 STY4664 STY4665 STY4666 STY4667 STY4668 STY4669 STY4670 STY4671 STY4672 STY4673 STY4674 STY4675 STY4676 STY4677 STY4678 STY4679 STY4680 STY4706 STY4755 STY4756 STY4765 STY4821 STY4822 STY4823 STY4824 STY4825 STY4826 STY4827 STY4828 STY4829 STY4830 STY4831 STY4832 tviA 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 5.1.5 0.0.1 4.1.0 4.1.0 5.1.4 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 5.1.2 4524140 4525220 4525533 4527028 4528781 4530221 4530511 4531179 4532268 4534634 4536854 4537312 4537567 4537926 4538390 4539197 4539799 4540153 4541654 4565301 4612132 4613286 4622105 4683853 4685181 4686254 4687302 4688741 4689323 4689566 4690849 4691273 4691653 4691877 4692212 4524679 4525408 4527044 4528617 4529794 4530514 4530999 4531631 4534553 4536307 4537315 4537533 4537710 4538252 4539172 4539409 4540077 4541343 4542913 4565678 4613271 4614674 4622563 4685118 4686257 4687327 4688465 4689307 4689562 4690426 4691172 4691656 4691880 4692197 4694545 cII apl cI cII int int yjeN tnpA cI hypothetical protein hypothetical protein conserved hypothetical protein hypothetical protein phage regulatory protein phage regulatory protein phage repressor protein cI phage integrase hypothetical protein hypothetical protein Putative methyltransferase conserved hypothetical protein Vi polysaccharide export protein Vi polysaccharide export inner-membrane protein Vi polysaccharide export ATP-binding protein Vi polysaccharide export inner-membrane protein (ABC-2 type transporter) Vi polysaccharide export protein Vi polysaccharide biosynthesis protein TviE, Glycosyl transferases group 1 insertion element IS1 protein InsB insertion element IS1 protein Vi polysaccharide biosynthesis protein Vi polysaccharide biosynthesis protein, epimerase Vi polysaccharide biosynthesis protein, UDPglucose/GDP-mannose dehydrogenase Vi polysaccharide biosynthesis protein hypothetical protein putative DNA helicase hypothetical protein probable phage integrase hypothetical protein conserved hypothetical protein putative membrane protein hypothetical protein putative membrane protein hypothetical protein transcriptional regulatory protein hypothetical protein hypothetical protein hypothetical protein putative membrane protein integrase (fragment) putative membrane protein bacteriophage integrase conserved hypothetical protein putative exported protein putative exported protein transposase for insertion sequence element is200 integrase protein kinase protein kinase hypothetical protein phage polarity suppression protein bacteriophage gene regulatory protein putative phage capsid protein phage DNA binding protein phage immunity repressor protein hypothetical protein hypothetical P4 phage protein Bacteriophage P4 DNA primase STY4833 STY4834 STY4835 STY4836a STY4837 STY4838 STY4839 STY4841 STY4842 STY4843 STY4845 STY4846 STY4848 STY4849 STY4850 STY4851 STY4852 STY4853 STY4922 sefA sefB sefC sefD, sefD sefR yafM 5.1.5 5.1.5 5.1.4 4694767 4694997 4695457 4694907 4695146 4696511 4.1.5 5.1.5 5.1.5 4.1.5 6.1.1 5.1.5 5.1.5 2.2.09 5.1.5 5.1.4 5.1.5 5.1.5 5.1.5 0.0.0 0.0.0 0.0.1 4696958 4697576 4698333 4700846 4701328 4702716 4702910 4703505 4704346 4705454 4706399 4710186 4712736 4716299 4716616 4782631 4697451 4698328 4700849 4701288 4702139 4702925 4703260 4704156 4705191 4706288 4710148 4712723 4716035 4716538 4717491 4783116 hypothetical protein hypothetical secreted protein putative transposase for insertion sequence (pseudogene) fimbrial protein precursor (pseudogene) fimbrial chaperone protein outer membrane fimbrial usher protein putative fimbrial protein (pseudogene) putative activator protein SefR (pseudogene) probable regulatory protein putative gerE-family regulatory protein thiol:disulfide interchange protein (pseudogene) putative outer membrane protein putative transposase (pseudogene) helicase related protein DEAD-box helicase-related protein conserved hypothetical protein hypothetical protein hypothetical protein conserved hypothetical protein
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