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Nat Rev Genet
Nat Rev Genet

... What depth of sequencing is required to characterize a transcriptome? ...
A Mini-Review
A Mini-Review

... the same trend has been reported in senescent cells. The data on histone methylation are quite robust; the role of acetylation in HGPS, however, is still controversial. Sirtuins are deacetylases that are also active on acetylated histone substrates, with a suggested role in regulating ageing process ...
Genetic Diseases and Gene Therapy
Genetic Diseases and Gene Therapy

... • Concept maps allow you to organize lots of information into a form that is easily understood. • Concept maps allow you to visualize connections within the information. ...
Genetic Control of Growth
Genetic Control of Growth

... By the end of this lesson you should be able to:  Describe the Jacob-Monod hypothesis of gene action in bacteria.  Explain lactose metabolism in Escherichia coli.  Describe the role played by genes in the control of metabolic pathways.  Know what PKU is and how it is caused.  Describe how cell ...
DNA Technology
DNA Technology

...  Amplifies a specific region in the DNA  Used for identification, especially if the amount of DNA is small  Uses repeated cycles of heating to denature DNA and cooling to synthesize new DNA Involves the use of ---Taq polymerase (a DNA polymerase that withstands heat) ---primers to begin synthesi ...
Introduction to biological databases
Introduction to biological databases

... 3D structure prediction Structure still available for a limited number of proteins  Effort to predict protein structures based on sequences similarities  Still not very accurate! ...
DIR 146 - Summary of Risk Assessment and Risk Management Plan
DIR 146 - Summary of Risk Assessment and Risk Management Plan

... The risk assessment concludes that risks to the health and safety of people, or the environment, from the proposed release are negligible. The risk assessment process considers how the genetic modification and proposed activities conducted with the GMOs might lead to harm to people or the environmen ...
No Slide Title
No Slide Title

... RAPD- random amplified polymorphic DNA ...
Phenotype vs. Genotype
Phenotype vs. Genotype

... These two genes might discover that they are different alleles. Each gene has a different idea about how the trait should turn out. This means the two alleles are heterozygous In this case: The recessive allele can’t get a word in edgewise!  The dominant gene won't listen to anything that recessive ...
Multicolor reporter gene assay for toxicity testing
Multicolor reporter gene assay for toxicity testing

... bioluminescence reactions, are used most frequently because their sensitivity and linear response range are superior to those of typical reporters including ß-galactosidase, chloramphenicol, acetyltransferase, ß-glucuronidase and fluorescent proteins. Bioluminescence is a simple reaction that is tri ...
Overlapping gene structure of human VLCAD and
Overlapping gene structure of human VLCAD and

... and is transcribed in the opposite direction. DLG4 encodes postsynaptic density-95 (PSD95) protein, which plays critical roles in the formation and maintenance of synaptic junctions. The transcription start site of the VLCAD gene was determined by primer extension analysis and the overlapping struct ...
Lecture 6 Gene expression: microarray and deep sequencing
Lecture 6 Gene expression: microarray and deep sequencing

... Can rely on existing human genome as a blue print. Align the short reads onto the existing human genome. Need a few fold coverage to cover most regions. Sequence a whole new genome? --- Assembly Overlaps are required to construct the genome. The reads are short  need ~30 fold coverage. If 3G data p ...
Genetics Notes HONORS
Genetics Notes HONORS

... – Bad thing most people who have it, already have children and pass it on to children before they realize they have the disease ...
AgCaspar depletion regulated immune genes with diverse
AgCaspar depletion regulated immune genes with diverse

... the apoptotic response of midgut epithelial cells [48]. caspar silencing influenced transcription of significantly fewer immune genes, which is a likely indication that this negative regulator affects a certain branch of the Imd pathway: the Dredd-dependent activation of Rel2 [16, 49]. This selectiv ...
LOYOLA COLLEGE (AUTONOMOUS), CHENNAI – 600 034
LOYOLA COLLEGE (AUTONOMOUS), CHENNAI – 600 034

... 13. Explain the role of different types of complexes involved in electron transport chain. 14. Explain the biosynthesis of saturated fatty acids. 15. Describe the Watson and Crick model of DNA. 16. Explain diagrammatically how the replication gets terminated in the prokaryotes. 17. Explain any two D ...
Chapter 15 Guided Reading
Chapter 15 Guided Reading

... 8. Discuss histone acetylation and methylation (addition of a methyl group) and their influence on transcription and the chromatin. Watch the first ½ of this video http://www.youtube.com/watch?v=0jCOGuDcUXg ...
The making of the Fittest: Natural Selection and
The making of the Fittest: Natural Selection and

... Natural selection acts on phenotypes, which are largely shaped by genotypes. Because of this relationship, gene frequencies change as phenotypes are selected for or against within a population. Genes that code for beneficial traits tend to accumulate in populations. Similarly, genes that code for tr ...
Reverse genetics - From protein or RNA to gene Up until
Reverse genetics - From protein or RNA to gene Up until

... Reverse genetics - From protein or RNA to gene Up until now, we’ve been following the classical genetic approach to creating an inventory of components, the path from mutation to gene. With the gene in hand, information from the DNA sequence can be obtained. In addition, having the gene enables a wi ...
Genetic test for determining athletic abilities
Genetic test for determining athletic abilities

... the development of characteristics determined by our genes1. Therefore a person with genetically promising athletic potential may be less successful, because of pursuing a lifestyle that does not support such potential. Athletic potential is not determined by just one gene, because overall physical ...
PGM Quizzes
PGM Quizzes

... inserts representing all the DNA in cells of a particular organism. When preparing DNA inserts for a genomic library, you need to make sure that the fragments meet three criteria. Name any two. correct size for the vector of choice, regions of overlapping sequence among fragments, ends compatible wi ...
here - Statistics for Innovation (sfi)
here - Statistics for Innovation (sfi)

... • With the t–test, we estimate the variance of each gene individually. This is fine if we have enough replicates, but with few replicates (say 2–5 per group), the variance estimates are unstable. • In a moderated t–statistic, the estimated gene– specific variance s2g is augmented with s20, a global ...
Problem Set 3 Grader: Mayra
Problem Set 3 Grader: Mayra

... uncover the molecular target of this new leg suppressing function. You do not need to name specific targets. ...
Slides
Slides

... Extrinsic Content Sensors The second type of sequences are transcripts, sequenced as cDNAs (a cDNA is a DNA copy of a mRNA) either in the classical way for targeted individual genes with high coverage sequencing of the complete clone or as expressed sequence tags (ESTs), which are one shot sequence ...
Polygenic Multifactorial Inheritance
Polygenic Multifactorial Inheritance

... peroxisome proliferator-activated receptor-gamma (PPAR-gamma) and many more The environment: •  What can I say more? Anything that cause high blood pressure, high blood triglycerides level, gestational diabetes, giving birth to a baby >9 pounds, high fat/alcohol intake, sedentary lifestyles, obesity ...
Diabetes Mellitus
Diabetes Mellitus

... • Radioactive iodine uptake test measures rate of iodine uptake. Patients with hyperthyroidism exhibit a high uptake, hypothyroidism will have low uptake • Thyroid scan—helps determine the location, size, shape and size of gland. “Hot” areas (increased function) and “cold” areas (decreased function) ...
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Epigenetics of diabetes Type 2

In recent years it has become apparent that the environment and underlying mechanisms affect gene expression and the genome outside of the central dogma of biology. It has been found that many Epigenetic mechanisms are involved in the regulation and expression of genes such as DNA methylation and chromatin remodeling. These epigenetic mechanisms are believed to be a contributing factor to pathological diseases such as Diabetes type II. An understanding of the epigenome of Diabetes patients may help to elucidate otherwise hidden causes of this disease.
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