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... X Chromosome Inactivation • Mechanism of X Chromosome inactivation • XIC – X chromosome Inactivation Center • XIC controls expression of the XIST gene • XIST: X-inactive-specific transcript • XIST produces a non-coding 17 kb RNA molecule • “Coats” the entire local X-chromosome – cisacting ...
Both Polymorphic Variable Number of Tandem Repeats
Both Polymorphic Variable Number of Tandem Repeats

... VNTR-3⬘, CTTGGAACAGACCTGCTTGA. The luciferase reporter vector for the class III VNTR was constructed from a ␭HI-3 clone (18). An artificial class III construct was assembled by linking four class I VNTRs 5⬘-upstream of the human insulin basal promoter sequentially. The 1.1 kb sequence 5⬘-upstream of ...
functional_enrichment_new - Baliga Lab at Institute for Systems
functional_enrichment_new - Baliga Lab at Institute for Systems

... Working with topGO data object > ann.genes <- genesInTerm(GOdata.BP, sel.terms) > str(ann.genes) List of 10 $ GO:0032913: chr [1:6] "208650_s_at" "208651_x_at" "209771_x_at" "209772_s_at" ... $ GO:0043372: chr [1:36] "1554519_at" "1555689_at" "1565358_at" "1569748_at" ... $ GO:0044259: chr [1:111] ...
A Degenerate ParaHox Gene Cluster in a Degenerate Vertebrate
A Degenerate ParaHox Gene Cluster in a Degenerate Vertebrate

... bony fish (Holland et al. 1994; Venkatesh et al. 2007). Furthermore, it has been suggested that these genome duplications preceded and may even have been the cause of the innovations seen in vertebrate developmental patterning (Shimeld and Holland 2000). The timing of these duplications is therefore ...
Thyroid Disorders and Diabetes Mellitus
Thyroid Disorders and Diabetes Mellitus

... [61, 62]. In hypothyroidism, reduced levels of adiponectin have been shown by Dimitriadis et al. [44], and comparable levels of adiponectin were observed in hypothyroid patients and controls in a study by Nagasaki et al. [63]. Therefore, no definite conclusion can yet be drawn, and further studies a ...
Document
Document

... blood and they know there mother’s grandparents are type A. What are the genotypes of their parents?  Mother is Iai and dad is I Bi ...
POSTERIOR PITUITARY GLAND
POSTERIOR PITUITARY GLAND

... disease. – In animal models DI is reported only in autosomal recesssive conditions ie, expressed only in homozygote rats; 50% expression can prevent the disease. – In the human disorder, DI is not present at birth but only develop in childhood or early adult, speculated to be as a result of the vaso ...
Analysis of Microarray Genomic Data of Breast Cancer Patients
Analysis of Microarray Genomic Data of Breast Cancer Patients

... • Clustering analysis:85 cDNA microarray experiments: 78 cancers, 3 fibroadenomas, 4 normal breast tissues • Survial analysis: 49 patients in a cohort study in which advanced breast cancers without metastasis were uniformly treated ...
The Detection of Carbapenemases in Carbapenem
The Detection of Carbapenemases in Carbapenem

... prevalence worldwide and are associated with an increase in morbidity and mortality. The most prevalent resistance mechanisms are carbapenemases. The different carbapenemases have different epidemiology and therapeutic options. Therefore, it is important to understand the resistance mechanisms of ca ...
Arabidopsis AtCAP-C Disruption of the SMC4 gene,
Arabidopsis AtCAP-C Disruption of the SMC4 gene,

... encoding an SMC2 protein, exhibits aberrant endosperm nuclei and giant mitotic figures, but there are no significant defects in the embryo proper nor any postembryonic defects. Two other titan mutants (ttn7 and ttn8, encoding SMC3 and SMC1, respectively) differ from ttn3 in that in addition to endosper ...
et al. Diabetes Care
et al. Diabetes Care

... the results led to the EASD making "an urgent call for more research into a possible link between use of insulin glargine (an insulin analogue, brand name Lantus) and increased risk of cancer. The European Medicines Agency (EMEA) responded, stating that the results of the four studies were inconsist ...
Genetic Hearing Loss
Genetic Hearing Loss

...  About 50% of childhood SNHL attributed to genetic factors, 20-25% environmental factors, and 25-30% sporadic  Relative increase in prevalence of genetic SNHL mandates clinicians be familiar with the diseases  Genetic syndromes usually classified by other involved systems  Nonsyndromic HL charac ...
TimeClust: a clustering tool for gene expression time series
TimeClust: a clustering tool for gene expression time series

... performed different experiments in which they used cDNA microarrays to measure gene expression values at different time points along the cell cycle. In one of these, they measured the log2 Cy5 of gene expression at 26 time points over 44 hours using microarrays Cy3 containing about 42000 clones. Mor ...
Looping versus linking: toward a model for long
Looping versus linking: toward a model for long

... enough apart, the chromatin structure of the transcribed region quickly reverted to the 30-nm fiber. These observations strongly suggest that the basal structure of an active chromatin domain is the 30-nm chromatin fiber. Finally, it is highly improbable that the DNA content of a cell could be store ...
NARRATOR: Pembrey was stunned. Angelman syndrome and
NARRATOR: Pembrey was stunned. Angelman syndrome and

... Then began the meticulous process of dissolving the cells until all that was left were the wispy strands of DNA, the master molecule that contains our genes. Next, researchers amplified fragments of the DNA, revealing both the genes and their epigenetic tags. Those that had been turned off appear as ...
Gill: Genes Enrichment, Gene Regulation I
Gill: Genes Enrichment, Gene Regulation I

... http://cs273a.stanford.edu [Bejerano Fall16/17] ...
What Makes the “Blue” in Blueberries?
What Makes the “Blue” in Blueberries?

... wine quality-related clades and conserved gene structure organization across Vitis and Arabidopsis genomes • José Tomás Matus, Felipe Aquea, and Patricio Arce-Johnson ...
Prokaryotic Gene Regulation (PowerPoint) Gulf Coast 2012
Prokaryotic Gene Regulation (PowerPoint) Gulf Coast 2012

... 2. Once ONE mRNA is produced, does it just stop? 3. Can only one repressor block all the RNA polymerases? 4. How many places does RNA polymerase bind? 5. Why does this gene need to be regulated? 6. Where does lactose comes from and where does it go? 7. How many lac operons are in a single E. coli ce ...
Editorial Comment Will Gene Markers Predict Hypertension?
Editorial Comment Will Gene Markers Predict Hypertension?

... the B27 phenotype. Although the basis for this association has not been established, it suggests that the specific B27 antigen may be related to the pathogenic mechanism leading to the disease. In other words, the marker gene does not just sit next to the disease gene, it actually is a gene involved ...
Mapping the Genetic Architecture of Gene Expression in Human Liver
Mapping the Genetic Architecture of Gene Expression in Human Liver

... associated traits. Because a majority of single nucleotide polymorphisms (SNPs) detected as associated with disease traits from the recent wave of genome-wide association studies (GWASs) do not appear to affect protein sequence, it is likely that these SNPs either regulate gene activity at the trans ...
duchenne muscular dystrophy (dmd) introduction
duchenne muscular dystrophy (dmd) introduction

... radial and longitudinal tensions, and since myofilaments are connected to actin, then to dystrophin, and then to the sarcolemma, dystrophin helps to serve this function as well. Muscle cells cannot withstand the tension anymore, which leads to an impaired muscle cell function. 3 ...
CSIRO Cane Toad Research
CSIRO Cane Toad Research

... The second objective is to develop a means of delivering the gene effectively throughout the toad population. To deliver the gene across the wide geographical range of the cane toad, an efficient means of delivery is needed. One way to do this is to use a virus that can act as a ‘taxi’ in delivering ...
Sex Linked Genes
Sex Linked Genes

... One of the great debates in life is whether you are the way you are because of your genes or because of the environment you were brought up in. What do you think?? Does nature or nurture have the biggest effect?? Its very difficult to determine this in reality, we would need about 1000 sets of ident ...
Chapter12_Section05_edit-1
Chapter12_Section05_edit-1

... Many proteins can bind to different enhancer sequences. Some DNA-binding proteins enhance transcription by: • opening up tightly packed chromatin • helping to attract RNA polymerase • blocking access to genes Slide 17 of 26 Copyright Pearson Prentice Hall ...
discussion  - 123SeminarsOnly.com
discussion - 123SeminarsOnly.com

... Mendel's studies were restricted to few characters, where a particular gene's expres sion is complete and over bearing. The expression of single dominant gene in a heterozygous form is so complete, that it is rather diffi cult to distinguish the dominant homozygous from dominant heterozygous con dit ...
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Epigenetics of diabetes Type 2

In recent years it has become apparent that the environment and underlying mechanisms affect gene expression and the genome outside of the central dogma of biology. It has been found that many Epigenetic mechanisms are involved in the regulation and expression of genes such as DNA methylation and chromatin remodeling. These epigenetic mechanisms are believed to be a contributing factor to pathological diseases such as Diabetes type II. An understanding of the epigenome of Diabetes patients may help to elucidate otherwise hidden causes of this disease.
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